MC06g1529 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g1529
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionDUF2647 domain-containing protein
LocationMC06: 22564491 .. 22564669 (+)
RNA-Seq ExpressionMC06g1529
SyntenyMC06g1529
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TATGGCGTATTTCTCCTATTCAAACAGGGGTTTGAAACCAAAATTCTCCTCAGGAGGATAAATGGGGCGATTCAGGTGAGATCCAACGTAGATCCAACTTTCTATTTACTCGTGGGATCCAGGCCGCCCAGGGGGACCACCTCGGCTCCTCTTTTCTCGAGAATCCATACATCCCTTAT

mRNA sequence

TATGGCGTATTTCTCCTATTCAAACAGGGGTTTGAAACCAAAATTCTCCTCAGGAGGATAAATGGGGCGATTCAGGTGAGATCCAACGTAGATCCAACTTTCTATTTACTCGTGGGATCCAGGGCCCAGGGGGACCACCTCGGCTCCTCTTTTCTCGAGAATCCATACATCCCTTAT

Coding sequence (CDS)

TATGGCGTATTTCTCCTATTCAAACAGGGGTTTGAAACCAAAATTCTCCTCAGGAGGATAAATGGGGCGATTCAGGTGAGATCCAACGTAGATCCAACTTTCTATTTACTCGTGGGATCCAGGGCCCAGGGGGACCACCTCGGCTCCTCTTTTCTCGAGAATCCATACATCCCTTAT

Protein sequence

YGVFLLFKQGFETKILLRRINGAIQVRSNVDPTFYLLVGSRAQGDHLGSSFLENPYIPY
Homology
BLAST of MC06g1529 vs. ExPASy Swiss-Prot
Match: Q49KT9 (Uncharacterized protein ycf68 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ycf68-1 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 8.4e-16
Identity = 42/53 (79.25%), Postives = 45/53 (84.91%), Query Frame = 0

Query: 8  KQGFETKILLRRINGAIQVRSNVDPTFYLLVGS-RAQGDHLGSSFLENPYIPY 60
          + GFETK LLRRI+GAIQVRSNVDPTFY LVGS R+ GD  GSS LENPYIPY
Sbjct: 42 RTGFETKPLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDPHGSSLLENPYIPY 94

BLAST of MC06g1529 vs. ExPASy Swiss-Prot
Match: Q85WV9 (Uncharacterized protein ycf68 OS=Pinus koraiensis OX=88728 GN=ycf68 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.5e-12
Identity = 36/58 (62.07%), Postives = 41/58 (70.69%), Query Frame = 0

Query: 6  LFKQGFETKILLRRINGAIQVRSNVDPTFYLLVGSRAQGD----HLGSSFLENPYIPY 60
          LF+ GF T+++LRRI+GAIQVRSN DPTFY  V     G     H GSS LENPYIPY
Sbjct: 7  LFEPGFGTELILRRIDGAIQVRSNADPTFYSFVDLGGPGGPVVIHHGSSLLENPYIPY 64

BLAST of MC06g1529 vs. ExPASy Swiss-Prot
Match: P52807 (Uncharacterized protein ycf68 OS=Pinus thunbergii OX=3350 GN=ycf68 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 3.3e-12
Identity = 36/58 (62.07%), Postives = 41/58 (70.69%), Query Frame = 0

Query: 6  LFKQGFETKILLRRINGAIQVRSNVDPTFYLLVGSRAQG----DHLGSSFLENPYIPY 60
          L + GF T+++LRRI+GAIQVRSN DPTFY  V     G     HLGSS LENPYIPY
Sbjct: 7  LCEPGFGTELILRRIDGAIQVRSNTDPTFYSFVDLGGPGVPVVIHLGSSLLENPYIPY 64

BLAST of MC06g1529 vs. ExPASy Swiss-Prot
Match: P03938 (Uncharacterized protein ycf68 OS=Zea mays OX=4577 GN=ycf68 PE=3 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 6.6e-05
Identity = 23/31 (74.19%), Postives = 26/31 (83.87%), Query Frame = 0

Query: 14 KILLRRINGAIQVRSNVDPTFYLLVGSRAQG 45
          K+LLRRI+GAIQVRS+VD TFY LVGS   G
Sbjct: 15 KLLLRRIDGAIQVRSHVDRTFYSLVGSGRSG 45

BLAST of MC06g1529 vs. ExPASy Swiss-Prot
Match: Q6L3C9 (Uncharacterized protein ycf68 OS=Saccharum hybrid OX=15819 GN=ycf68-1 PE=3 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 6.6e-05
Identity = 23/31 (74.19%), Postives = 26/31 (83.87%), Query Frame = 0

Query: 14 KILLRRINGAIQVRSNVDPTFYLLVGSRAQG 45
          K+LLRRI+GAIQVRS+VD TFY LVGS   G
Sbjct: 15 KLLLRRIDGAIQVRSHVDRTFYSLVGSGRSG 45

BLAST of MC06g1529 vs. NCBI nr
Match: MVM42569.1 (DUF2647 domain-containing protein [Staphylococcus aureus])

HSP 1 Score: 96.3 bits (238), Expect = 3.76e-24
Identity = 48/60 (80.00%), Postives = 53/60 (88.33%), Query Frame = 0

Query: 1  YGVFLLFKQGFETKILLRRINGAIQVRSNVDPTFYLLVGS-RAQGDHLGSSFLENPYIPY 59
          +GV LLF+ GFETK+LLRRI+GAIQVRSNVDPTFY LVGS R+ GDH GSS LENPYIPY
Sbjct: 21 HGVLLLFEPGFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDHYGSSLLENPYIPY 80

BLAST of MC06g1529 vs. NCBI nr
Match: KAG4109264.1 (hypothetical protein ERO13_1Z049482v2, partial [Gossypium hirsutum])

HSP 1 Score: 94.7 bits (234), Expect = 8.78e-24
Identity = 47/60 (78.33%), Postives = 53/60 (88.33%), Query Frame = 0

Query: 1  YGVFLLFKQGFETKILLRRINGAIQVRSNVDPTFYLLVGS-RAQGDHLGSSFLENPYIPY 59
          +GV LLF+ GFETK+LLRRI+GAIQVRSNVDPTFY LVGS R+ GDH GSS L+NPYIPY
Sbjct: 1  HGVLLLFESGFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDHHGSSLLDNPYIPY 60

BLAST of MC06g1529 vs. NCBI nr
Match: TYJ27401.1 (hypothetical protein E1A91_A07G185000v1, partial [Gossypium mustelinum])

HSP 1 Score: 94.4 bits (233), Expect = 1.25e-23
Identity = 47/60 (78.33%), Postives = 53/60 (88.33%), Query Frame = 0

Query: 1  YGVFLLFKQGFETKILLRRINGAIQVRSNVDPTFYLLVGS-RAQGDHLGSSFLENPYIPY 59
          +GV LLF+ GFETK+LLRRI+GAIQVRSNVDPTFY LVGS R+ GDH GSS L+NPYIPY
Sbjct: 1  HGVLLLFEPGFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDHHGSSLLDNPYIPY 60

BLAST of MC06g1529 vs. NCBI nr
Match: KAB2082065.1 (hypothetical protein ES319_A05G173300v1, partial [Gossypium barbadense])

HSP 1 Score: 90.5 bits (223), Expect = 4.07e-22
Identity = 46/59 (77.97%), Postives = 51/59 (86.44%), Query Frame = 0

Query: 2  GVFLLFKQGFETKILLRRINGAIQVRSNVDPTFYLLVGS-RAQGDHLGSSFLENPYIPY 59
          GV LLF+ GFETK+LL RI+GAIQVRSNVDPTFY LVGS R+ GDH GSS L+NPYIPY
Sbjct: 1  GVLLLFEPGFETKLLLWRIDGAIQVRSNVDPTFYSLVGSGRSGGDHHGSSLLDNPYIPY 59

BLAST of MC06g1529 vs. NCBI nr
Match: KAA1416305.1 (DUF2647 domain-containing protein [Nocardioides antri] >MVL64162.1 DUF2647 domain-containing protein [Staphylococcus aureus])

HSP 1 Score: 89.7 bits (221), Expect = 7.36e-22
Identity = 44/55 (80.00%), Postives = 49/55 (89.09%), Query Frame = 0

Query: 6  LFKQGFETKILLRRINGAIQVRSNVDPTFYLLVGS-RAQGDHLGSSFLENPYIPY 59
          +F+ GFETK+LLRRI+GAIQVRSNVDPTFY LVGS R+ GDH GSS LENPYIPY
Sbjct: 1  MFEPGFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDHYGSSLLENPYIPY 55

BLAST of MC06g1529 vs. ExPASy TrEMBL
Match: A0A5D2YQI0 (Uncharacterized protein ycf68 (Fragment) OS=Gossypium mustelinum OX=34275 GN=E1A91_A07G185000v1 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 6.04e-24
Identity = 47/60 (78.33%), Postives = 53/60 (88.33%), Query Frame = 0

Query: 1  YGVFLLFKQGFETKILLRRINGAIQVRSNVDPTFYLLVGS-RAQGDHLGSSFLENPYIPY 59
          +GV LLF+ GFETK+LLRRI+GAIQVRSNVDPTFY LVGS R+ GDH GSS L+NPYIPY
Sbjct: 1  HGVLLLFEPGFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDHHGSSLLDNPYIPY 60

BLAST of MC06g1529 vs. ExPASy TrEMBL
Match: A0A5J5VQY1 (Uncharacterized protein ycf68 (Fragment) OS=Gossypium barbadense OX=3634 GN=ES319_A05G173300v1 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.97e-22
Identity = 46/59 (77.97%), Postives = 51/59 (86.44%), Query Frame = 0

Query: 2  GVFLLFKQGFETKILLRRINGAIQVRSNVDPTFYLLVGS-RAQGDHLGSSFLENPYIPY 59
          GV LLF+ GFETK+LL RI+GAIQVRSNVDPTFY LVGS R+ GDH GSS L+NPYIPY
Sbjct: 1  GVLLLFEPGFETKLLLWRIDGAIQVRSNVDPTFYSLVGSGRSGGDHHGSSLLDNPYIPY 59

BLAST of MC06g1529 vs. ExPASy TrEMBL
Match: A0A5B1L6Z4 (DUF2647 domain-containing protein OS=Nocardioides sp. BN140041 OX=2607659 GN=F0U47_20625 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.57e-22
Identity = 44/55 (80.00%), Postives = 49/55 (89.09%), Query Frame = 0

Query: 6  LFKQGFETKILLRRINGAIQVRSNVDPTFYLLVGS-RAQGDHLGSSFLENPYIPY 59
          +F+ GFETK+LLRRI+GAIQVRSNVDPTFY LVGS R+ GDH GSS LENPYIPY
Sbjct: 1  MFEPGFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDHYGSSLLENPYIPY 55

BLAST of MC06g1529 vs. ExPASy TrEMBL
Match: A0A3N9TAC2 (DUF2647 domain-containing protein OS=Vibrio viridaestus OX=2487322 GN=EES38_21915 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.57e-22
Identity = 44/55 (80.00%), Postives = 49/55 (89.09%), Query Frame = 0

Query: 6  LFKQGFETKILLRRINGAIQVRSNVDPTFYLLVGS-RAQGDHLGSSFLENPYIPY 59
          +F+ GFETK+LLRRI+GAIQVRSNVDPTFY LVGS R+ GDH GSS LENPYIPY
Sbjct: 1  MFEXGFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDHYGSSLLENPYIPY 55

BLAST of MC06g1529 vs. ExPASy TrEMBL
Match: A0A7S8WWX1 (Uncharacterized protein OS=Gynandropsis gynandra OX=190802 GN=ycf68 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 7.20e-22
Identity = 44/55 (80.00%), Postives = 49/55 (89.09%), Query Frame = 0

Query: 6  LFKQGFETKILLRRINGAIQVRSNVDPTFYLLVGS-RAQGDHLGSSFLENPYIPY 59
          +F+ GFETK+LLRRI+GAIQVRSNVDPTFY LVGS R+ GDH GSS LENPYIPY
Sbjct: 1  MFEPGFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDHHGSSLLENPYIPY 55

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q49KT98.4e-1679.25Uncharacterized protein ycf68 OS=Eucalyptus globulus subsp. globulus OX=71271 GN... [more]
Q85WV91.5e-1262.07Uncharacterized protein ycf68 OS=Pinus koraiensis OX=88728 GN=ycf68 PE=3 SV=1[more]
P528073.3e-1262.07Uncharacterized protein ycf68 OS=Pinus thunbergii OX=3350 GN=ycf68 PE=3 SV=1[more]
P039386.6e-0574.19Uncharacterized protein ycf68 OS=Zea mays OX=4577 GN=ycf68 PE=3 SV=2[more]
Q6L3C96.6e-0574.19Uncharacterized protein ycf68 OS=Saccharum hybrid OX=15819 GN=ycf68-1 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
MVM42569.13.76e-2480.00DUF2647 domain-containing protein [Staphylococcus aureus][more]
KAG4109264.18.78e-2478.33hypothetical protein ERO13_1Z049482v2, partial [Gossypium hirsutum][more]
TYJ27401.11.25e-2378.33hypothetical protein E1A91_A07G185000v1, partial [Gossypium mustelinum][more]
KAB2082065.14.07e-2277.97hypothetical protein ES319_A05G173300v1, partial [Gossypium barbadense][more]
KAA1416305.17.36e-2280.00DUF2647 domain-containing protein [Nocardioides antri] >MVL64162.1 DUF2647 domai... [more]
Match NameE-valueIdentityDescription
A0A5D2YQI06.04e-2478.33Uncharacterized protein ycf68 (Fragment) OS=Gossypium mustelinum OX=34275 GN=E1A... [more]
A0A5J5VQY11.97e-2277.97Uncharacterized protein ycf68 (Fragment) OS=Gossypium barbadense OX=3634 GN=ES31... [more]
A0A5B1L6Z43.57e-2280.00DUF2647 domain-containing protein OS=Nocardioides sp. BN140041 OX=2607659 GN=F0U... [more]
A0A3N9TAC23.57e-2280.00DUF2647 domain-containing protein OS=Vibrio viridaestus OX=2487322 GN=EES38_2191... [more]
A0A7S8WWX17.20e-2280.00Uncharacterized protein OS=Gynandropsis gynandra OX=190802 GN=ycf68 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022546Uncharacterised protein family Ycf68PFAMPF10839DUF2647coord: 13..44
e-value: 2.4E-12
score: 46.7

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g1529.1MC06g1529.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009507 chloroplast