MC06g1331 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g1331
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	thylakoid lumenal protein TL20.3, chloroplastic isoform X1
Location	MC06: 20347833 .. 20352841 (+)
RNA-Seq Expression	MC06g1331
Synteny	MC06g1331

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGTCAAACATTGATGGCTAATCCAATCTCAATCTCTCACATATTTGAGCTTTAATCATACAATCGGTAGCTAATGAAGTGTTAAAACAAATTATACTATTTAAATTGTAAATAAAAAATATGCTAGAGAAATGAATTTTGTATTTTGAAGCTTGAAGCTTGAACAACGGATACATGAAAACATGGGTGTCAAATGATGTTGGTAGAATAATGTTCCACGGATCAACTTCAAACAAGCTTCCGAGGAGAAATTGATGTCCGGCCCACTGGGCCTGAAATAAGGCCTATGCTAACCCAAACGGCCCATTACAAGTGGGCCTTAAGCCCTAAGACGGAAGTCAGGCCCACAAAGTAAGTCTGATAGAAGGAAATGATGCCAATGATGCTGAAGGGCTTCACTAGCAAAAGCAGCCCATATTCATATTTTCAGACAAAATATCAGCCATTGGTTGCCCAAGACCAAGAGCAAGCCAACACGAATGCAAATCCTGAATAAACTGATAAATCACTTTAACCACTAAAATTCTTCCTCTCCAATCGTTTTCTTTCCCCTCTTCCTCTCTTATCCAGAAAAACTTTCCTAAACTCTCTTCCAGCAGAAGGTCCCCCAATTCCCACTCATGGCACTTTCTTCTTTTTCCTCGCTATCAGTCAAATGCATACCCATTTCTTCTTCATCTAAATCAAAGCTTCCCAGTTCTCTGCAACCCAGAAAAACAATTTCCATAGTCTCTCACTCTCGACTAAACCCAGAAAAGACTCAAACTCAAGGTGAGTATGGTATTCTCTTTATTTCTATATTTCTGATAGCAGCTTCTGGATTCCATGTTTGTTACCTTCGCTCTGCTGACTTATATTTCATTGAAAAGGAAGATTGTTTGGAGAAGAAACACATTGGTAAGATTTCAGAGCCTAAGAGATGGCAAAAGCTGGTATCGACTGCTTTGGCTGCTGCTGCAGTCATTAGTTTTAGCTCAGGCATGCCTTCAATTGCTGAACTCAACAAGTATGAGGCTGATACACGTGGTGAATTTGGAATTGGATCTGCCGCTCAATTTGGATCTGCAGATCTCAGGTCTTTAGGCTTTCAAGAGACTATTCACAGTTCCTTTATTGTCAAAGTGGCTGACCAACACTATGCTTATGCCAATTTTCTTCTTTGGGCAGGAAAGCAGTGCATGTGAACGAAAATTTCAGGTAGCCTTCTCATTGTTTCATCATATCTTTGTGCCCTGATGCTTGATTCTTCAAGTCCCTATTTCTAAAAATAGTCACAATGGAAGAATTTTAAAGAAACTATAGCTCAACTTCGTTGGCCCGAAGGAATACTGAAATGAAATCTTGAACTAATCCATCCACCCATTTCTAACATTTGATATACAGAGTCTTAACTTTGAAATGATAACTTAGTTCCAAGTGAGTTGAGAGACTTCATGATTTAAAATTTCCAGAGCAATCTTATACTTGGTTCTTACCGTTGAATCAAATGACTGTAACAGAAGAGCCAATTTCACATCTGCTGATATGAGGGAATCAGATTTCAGTGGTTGTACATTCAATGGCGCATACCTTGAGAAAGCTGTTGCATACAAAACAAATTTCTCAGGTAATTTTCTTATCAATTAACATGGCCTCTTTGAATGGCATAAGACTCATTCTTTGGATGTATACATTAAATCACAGAAAAACTTGATCAAATCATAAATCTTGAAGTTCTTCGCCTTCGCAAATTCTCTTAGTTGGTTTCGATTTACAAATTCTCTTGCTTTGTCTCCATGGGCAATTTGGCGCTGCCGTCAAAGCCTGCACCACGACCCTTTTCTCCATAGATTCAGGGCCAGTTGCAACAAGTATTCCTCCCTCGGATTTCTCATCGTCAAATTGTCTAGAAAACTTCCCCCCTATATTTATATCTTCATTCCCAGTTGCCTTCCTTGTTGTATCCTCCAAAAGATTATGGTCTTCAGACTCTGTTCTGCTAGTGATTGGAGACTGCAACCAAGACTTACACGGATTGGCTCCGGAATAACTTGCAGCATTTAATTTCTTTGCAACTTTGGTTGATGCTCCATACCAATGTCTCTTTTTAGTTCTTGAACTATTGTTCTGCAAGCATTTTGAGCCATGTTGAGTTCTAACCCGAGGAGCACCCGTCCCGCACCCGGGAGGAAAGCTTCTAATTGCTGAAAAACCCTTTCGAGGTGGATGAAACTTAGGCAAGCTGTCCACAAGTACAACATGTTCCTTTGGAACATTGACTATCTCATCTTCATTAGTACTTAAAACAGTAAGAGTGTCAACTATTAGTGCTGAATCAAGTACTGCATCCTTCATAATAGAAACAAAGGAGTTCTCTGGTTCCACCATCCTAGAAATTAATCTATGATTTCTACAACACTCCATCACAAAATCAAGAAGAGCATAAATCTTTTGATGCTGAACCTCCATCGAAGCCTCTGAAGTTGAAGACTCCATCGTGTTGCTAATTGAAAGCCTAACCCATAACAAAGTAAATCAGAACACAAGTCCAACCAAAACAAGATCAAAATAACTAAATCTAGAATCACAAGTGAAATAAAATAACCTTAGTAAATTATTACATTACATCAATGATTCATTAGATTATATTACTTTAAGTTACGAAGAAATCCACACACTCCTCTCCCCACACCTATCACTCCCGGGTCAAAATCATCCGCCAATCCTGAACAACCGAACCCGAGGAACATTTTATTTTTGTTTATTGTTAAACGGACAAGAACGCGAATAAGCTAGGATATAAATGCAAACAGAAACAGATTAATCAGATGGAGATTTGAGATGCACGATTTATGGAGATCTCTGCTTTGGAAATAAGAACGAAATAAAATAATTGGAAGAGAAAATAGAGTAAGATCCAACCTTAAAATCAAGAAAAGTGTTCTTATCTTGTCCCCCAATTTCTAGGGTTTGCTGAACTGCACGCTCCCTCTCCTGTCCTGTCCCATTCTTTTGGGCCTCCGTTGAAACTGAAATTTTGTTGCGACAAATGAATGTCAATTTTGTTGCCAAGAGGAAACAAAATCACTTCTTCATTTATAACTTCCACTCATACGATACGACGTAGCCTCGGCGGAAAAGGAAACCATTCCCTTTTCGTATTTAAAAATTACATATTTTAAATATTACACATAAGATAAGTTTTAAACGTGGACATTGAAATGGATATTTTTAAAATAATTATAAAAATAAAAAAATATATAAATTAATAATTATACTCAACTTGTGAATGTACCTATTCTCACTCCTACCTATTATACTCAAAACTAAATAAATAAAGTAGGGATAATAATATTTATATTATTTCAATCTTATTTTAATTATTATTTCAGGCGCAGATTTGAGTGACACATTGATGGATCGAATGGTAAGTAAGAAAATAAGACGCTTTCGTTTTTTTAAATATAGTGTCATTTTAAAATATAATTTTATTTTTTAAAATATAGAGTGAAATTTGTAGAGATTGGTCTTTGAATTGATGTGTTGTATATCAATCTTTCCCCAAATTTAGGTTAAAAAATATATTTAATCCCTGTACTCTCGCTAAAATAACAATTCAGTCCCTAAACTTTAGTTTGTAATGATTTAGTCCATGTATTTTCAAATTGGTAACAATTTAGTACTTGATTTAATATGTAACAATTTAGTGCTTGTAATTTAAAATTGGTAACGATCAATCCTTATCATAATTTTTTTTATTAAGTTTCCTGTATGTATAGATTGATAACTAGAGAGCGACCAAATATGTTTATGAATTAGAAAGGTTAAATTGTTATATGATAAAATTTTTGACACATAATTTAATAAAAGATTTTGCAATATGGACTAAATTGTTACAAATTTTAAATTACAGAGACAAAATCGTTACAAGTTAAAGTTCAGGGACTAAATTGTTACTTTCAAGAAAGTACAAGGGGTTAAATTGTTATGTCAATTACCGCCGTTGAGCTATACTCGCTTTGACAATTTCCTTTATTTATTAGTTAAACATCAATCATTTTTAAGATTTAAAAAAAAAAACTTTGTTTAAGGTATGTGTATAGGGTTATATTGAATGTCATATAAGTATGATTATGATTTTTTTTTATATAAACCATGATTATGATTTAGTTCTTAGTATAAACACTTTAATTTAGATGATAGATATATATATAGTTTATGATAAGATTACATGATATATTATATTATGTGAGTTTATAATATCAATGTATCACGTGACCATATTTAACATCTAAAAGAATAACCTCAAATAGCGGGTCTAAAATATTAAAACTTTACAAATAATGCGGATATATATAGGTTTTGAATGAAGCAAATTTGACCAATGCGGTGCTGGTTCGATCGGTGCTAACACGCAGTGATCTAGGCGGGGCCATTATCGAAGGTGCCGACTTTAGCGACGCTGTCATAGACCTTCCCCAGAAGCAGGTTCTTTCCGCTTTGCTATATTACAAATTTAGTCCTTATTTTAAGGAGTCTCTAACTTTTTAAAATGTATGGATAATCTTTGCAAAATTTCGAATAGGTAAGAAATTTGTGGAGTAAAGGTGTGATTGTGTGTAATTACAGGCCCTTTGCAAGTATGCAAGTGGGACGAATCCGGTGACTGGGGTGAGCACGAGAGCAAGCCTAGGGTGCGGAAACAGCCGGAGAAACGCGTACGGAACGCCGTCGTCTCCGCTGCTGAGCGCACCGCCGCAGCAGCTGCTGGACCACGACGGTTTCTGCGACCAAGGCACAGGTCTCTGTGAAGCCACTAAATAATTAAAATCACAATTAATTCTTTAATTATTTATTTGAATCTCCCACAACTCACAACTCTCCATCAAATCTCTTTTGTACAAATTAATTAAAATAACGCTTACGCTTCTACACTGCACCAAATGTTTGAATCGTCCAACAGCTACCGTTGGAACTTGTCATCATTTTTTTTTTCTTTCCTTCTTGCATTTCTTAATTCGAATTAGTAG

mRNA sequence

TGGTCAAACATTGATGGCTAATCCAATCTCAATCTCTCACATATTTGAGCTTTAATCATACAATCGGTAGCTAATGAAGTGTTAAAACAAATTATACTATTTAAATTGTAAATAAAAAATATGCTAGAGAAATGAATTTTGTATTTTGAAGCTTGAAGCTTGAACAACGGATACATGAAAACATGGGTGTCAAATGATGTTGGTAGAATAATGTTCCACGGATCAACTTCAAACAAGCTTCCGAGGAGAAATTGATGTCCGGCCCACTGGGCCTGAAATAAGGCCTATGCTAACCCAAACGGCCCATTACAAGTGGGCCTTAAGCCCTAAGACGGAAGTCAGGCCCACAAAGTAAGTCTGATAGAAGGAAATGATGCCAATGATGCTGAAGGGCTTCACTAGCAAAAGCAGCCCATATTCATATTTTCAGACAAAATATCAGCCATTGGTTGCCCAAGACCAAGAGCAAGCCAACACGAATGCAAATCCTGAATAAACTGATAAATCACTTTAACCACTAAAATTCTTCCTCTCCAATCGTTTTCTTTCCCCTCTTCCTCTCTTATCCAGAAAAACTTTCCTAAACTCTCTTCCAGCAGAAGGTCCCCCAATTCCCACTCATGGCACTTTCTTCTTTTTCCTCGCTATCAGTCAAATGCATACCCATTTCTTCTTCATCTAAATCAAAGCTTCCCAGTTCTCTGCAACCCAGAAAAACAATTTCCATAGTCTCTCACTCTCGACTAAACCCAGAAAAGACTCAAACTCAAGATTGTTTGGAGAAGAAACACATTGGTAAGATTTCAGAGCCTAAGAGATGGCAAAAGCTGGTATCGACTGCTTTGGCTGCTGCTGCAGTCATTAGTTTTAGCTCAGGCATGCCTTCAATTGCTGAACTCAACAAGTATGAGGCTGATACACGTGGTGAATTTGGAATTGGATCTGCCGCTCAATTTGGATCTGCAGATCTCAGGAAAGCAGTGCATGTGAACGAAAATTTCAGAAGAGCCAATTTCACATCTGCTGATATGAGGGAATCAGATTTCAGTGGTTGTACATTCAATGGCGCATACCTTGAGAAAGCTGTTGCATACAAAACAAATTTCTCAGGCGCAGATTTGAGTGACACATTGATGGATCGAATGGTTTTGAATGAAGCAAATTTGACCAATGCGGTGCTGGTTCGATCGGTGCTAACACGCAGTGATCTAGGCGGGGCCATTATCGAAGGTGCCGACTTTAGCGACGCTGTCATAGACCTTCCCCAGAAGCAGGCCCTTTGCAAGTATGCAAGTGGGACGAATCCGGTGACTGGGGTGAGCACGAGAGCAAGCCTAGGGTGCGGAAACAGCCGGAGAAACGCGTACGGAACGCCGTCGTCTCCGCTGCTGAGCGCACCGCCGCAGCAGCTGCTGGACCACGACGGTTTCTGCGACCAAGGCACAGGTCTCTGTGAAGCCACTAAATAATTAAAATCACAATTAATTCTTTAATTATTTATTTGAATCTCCCACAACTCACAACTCTCCATCAAATCTCTTTTGTACAAATTAATTAAAATAACGCTTACGCTTCTACACTGCACCAAATGTTTGAATCGTCCAACAGCTACCGTTGGAACTTGTCATCATTTTTTTTTTCTTTCCTTCTTGCATTTCTTAATTCGAATTAGTAG

Coding sequence (CDS)

ATGGCACTTTCTTCTTTTTCCTCGCTATCAGTCAAATGCATACCCATTTCTTCTTCATCTAAATCAAAGCTTCCCAGTTCTCTGCAACCCAGAAAAACAATTTCCATAGTCTCTCACTCTCGACTAAACCCAGAAAAGACTCAAACTCAAGATTGTTTGGAGAAGAAACACATTGGTAAGATTTCAGAGCCTAAGAGATGGCAAAAGCTGGTATCGACTGCTTTGGCTGCTGCTGCAGTCATTAGTTTTAGCTCAGGCATGCCTTCAATTGCTGAACTCAACAAGTATGAGGCTGATACACGTGGTGAATTTGGAATTGGATCTGCCGCTCAATTTGGATCTGCAGATCTCAGGAAAGCAGTGCATGTGAACGAAAATTTCAGAAGAGCCAATTTCACATCTGCTGATATGAGGGAATCAGATTTCAGTGGTTGTACATTCAATGGCGCATACCTTGAGAAAGCTGTTGCATACAAAACAAATTTCTCAGGCGCAGATTTGAGTGACACATTGATGGATCGAATGGTTTTGAATGAAGCAAATTTGACCAATGCGGTGCTGGTTCGATCGGTGCTAACACGCAGTGATCTAGGCGGGGCCATTATCGAAGGTGCCGACTTTAGCGACGCTGTCATAGACCTTCCCCAGAAGCAGGCCCTTTGCAAGTATGCAAGTGGGACGAATCCGGTGACTGGGGTGAGCACGAGAGCAAGCCTAGGGTGCGGAAACAGCCGGAGAAACGCGTACGGAACGCCGTCGTCTCCGCTGCTGAGCGCACCGCCGCAGCAGCTGCTGGACCACGACGGTTTCTGCGACCAAGGCACAGGTCTCTGTGAAGCCACTAAATAA

Protein sequence

MALSSFSSLSVKCIPISSSSKSKLPSSLQPRKTISIVSHSRLNPEKTQTQDCLEKKHIGKISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAIIEGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDHDGFCDQGTGLCEATK

Homology

[Close]

BLAST of MC06g1331 vs. ExPASy Swiss-Prot
Match: Q8H1Q1 (Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL20.3 PE=1 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 2.9e-98
Identity = 200/281 (71.17%), Postives = 227/281 (80.78%), Query Frame = 0


Query: 1   MALSSFSSLSVKCIPI--SSSSKSKLPSSLQPRKTISIVSHSRLNPEKTQTQDCLEKKHI 60
           MA SS S L +K + I  SSSS S+ P   Q      +   SR N E   + +   ++  
Sbjct: 1   MAFSSLSPLPMKSLDISRSSSSVSRSPYHFQRYLLRRLQLSSRSNLEIKDSSN--TREGC 60

Query: 61  GKISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLR 120
              +E   W++++S A+ AAAVI+ SSG+P++AELN++EADTRGEFGIGSAAQ+GSADL 
Sbjct: 61  CSSAESNTWKRILSAAM-AAAVIASSSGVPAMAELNRFEADTRGEFGIGSAAQYGSADLS 120

Query: 121 KAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLN 180
           K VH NENFRRANFTSADMRESDFSG TFNGAYLEKAVAYK NFSGADLSDTLMDRMVLN
Sbjct: 121 KTVHSNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLN 180

Query: 181 EANLTNAVLVRSVLTRSDLGGAIIEGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRAS 240
           EANLTNAVLVRSVLTRSDLGGA IEGADFSDAVIDL QKQALCKYA+GTNP+TGV TR S
Sbjct: 181 EANLTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKS 240

Query: 241 LGCGNSRRNAYGTPSSPLLSAPPQQLLDHDGFCDQGTGLCE 280
           LGCGNSRRNAYG+PSSPLLSAPPQ+LL  DGFCD+ TGLC+
Sbjct: 241 LGCGNSRRNAYGSPSSPLLSAPPQRLLGRDGFCDEKTGLCD 278

[Close]

BLAST of MC06g1331 vs. ExPASy Swiss-Prot
Match: B1WVN5 (Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=rfr32 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.1e-16
Identity = 53/135 (39.26%), Postives = 73/135 (54.07%), Query Frame = 0


Query: 107 GSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGAD 166
           GS+A +    L       ++   A FT+AD+ +S+FS     GA    +     +  GAD
Sbjct: 44  GSSASYEDVKLIGEDFSGKSLTYAQFTNADLTDSNFSEADLRGAVFNGSALIGADLHGAD 103

Query: 167 LSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAIIEGADFSDAVIDLPQKQALCKYASG 226
           L++ L        A+LTNAVL  +++ R+    A I GADFS AV+D+ +   LC  A G
Sbjct: 104 LTNGLAYLTSFKGADLTNAVLTEAIMMRTKFDDAKITGADFSLAVLDVYEVDKLCDRADG 163

Query: 227 TNPVTGVSTRASLGC 242
            NP TGVSTR SLGC
Sbjct: 164 VNPKTGVSTRESLGC 178

[Close]

BLAST of MC06g1331 vs. ExPASy Swiss-Prot
Match: Q52118 (Uncharacterized protein in mobD 3'region OS=Pantoea stewartii subsp. stewartii OX=66271 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.4e-06
Identity = 37/104 (35.58%), Postives = 61/104 (58.65%), Query Frame = 0


Query: 108 SAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKA---VAY--KTNF 167
           S A   +ADL++A   N N   A+ T+A++ ++D      +GA L  A   +AY  + + 
Sbjct: 170 SNANLSNADLKRADLSNANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADL 229

Query: 168 SGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAIIEGAD 207
           S A+LS+  + R  L++ANL++A L    L R+DL  AI++GA+
Sbjct: 230 SNANLSNADLKRADLSDANLSDANLTNVDLKRADLSNAILKGAN 273

[Close]

BLAST of MC06g1331 vs. ExPASy Swiss-Prot
Match: Q55837 (Uncharacterized protein slr0516 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr0516 PE=4 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 4.9e-05
Identity = 32/88 (36.36%), Postives = 48/88 (54.55%), Query Frame = 0


Query: 126 NFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEAN---- 185
           + R  N  +A +  SD SG   +G  L +A+  + N +GA+LS+T +    L EAN    
Sbjct: 49  DLREFNLENARLNRSDLSGANLSGVNLRRALLDRANLTGANLSETDLTEAALTEANLAGA 108

Query: 186 -LTNAVLVRSVLTRSDLGGAIIEGADFS 209
            L+ A L RS L   DL GA ++GA+ +
Sbjct: 109 DLSGANLERSFLRDVDLTGANLKGANLA 136

[Close]

BLAST of MC06g1331 vs. ExPASy Swiss-Prot
Match: P81760 (Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL17 PE=1 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 3.2e-04
Identity = 44/173 (25.43%), Postives = 76/173 (43.93%), Query Frame = 0


Query: 73  TALAAAAVISFSSGMPSIA-ELNKYE-ADTRGEFGIGSAAQFGSADLRKAVHVNE--NFR 132
           T   A+ VI+ +  +P ++ E ++ E A      G  +       DLR   + N+  N +
Sbjct: 68  TLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRFCDYTNDQTNLK 127

Query: 133 RANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLV 192
               ++A M  + F G       + KA A + +F G + ++ ++DR+   ++NL  AV  
Sbjct: 128 GKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVNFGKSNLKGAVFR 187

Query: 193 RSVLTRSDLGGAIIEGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC 242
            +VL+ S    A +E   F D +I     Q +C+     N       R  LGC
Sbjct: 188 NTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICR-----NESINEEGRLVLGC 235

[Close]

BLAST of MC06g1331 vs. NCBI nr
Match: XP_022156469.1 (thylakoid lumenal protein TL20.3, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 547 bits (1410), Expect = 4.12e-196
Identity = 281/282 (99.65%), Postives = 281/282 (99.65%), Query Frame = 0


Query: 1   MALSSFSSLSVKCIPISSSSKSKLPSSLQPRKTISIVSHSRLNPEKTQTQDCLEKKHIGK 60
           MALSSFSSLSVKCIPISSSSKSKLPSSLQPRKTISIVSHSRLNPEKTQTQDCLEKKHIGK
Sbjct: 1   MALSSFSSLSVKCIPISSSSKSKLPSSLQPRKTISIVSHSRLNPEKTQTQDCLEKKHIGK 60

Query: 61  ISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA 120
           ISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA
Sbjct: 61  ISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA 120

Query: 121 VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA 180
           VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA
Sbjct: 121 VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA 180

Query: 181 NLTNAVLVRSVLTRSDLGGAIIEGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG 240
           NLTNAVLVRSVLTRSDLGGAIIEGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG
Sbjct: 181 NLTNAVLVRSVLTRSDLGGAIIEGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG 240

Query: 241 CGNSRRNAYGTPSSPLLSAPPQQLLDHDGFCDQGTGLCEATK 282
           CGNSRRNAYGTPSSPLLSAPPQQLLD DGFCDQGTGLCEATK
Sbjct: 241 CGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 282

[Close]

BLAST of MC06g1331 vs. NCBI nr
Match: XP_038875985.1 (thylakoid lumenal protein TL20.3, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 505 bits (1300), Expect = 2.15e-179
Identity = 261/282 (92.55%), Postives = 270/282 (95.74%), Query Frame = 0


Query: 1   MALSSFSSLSVKCIPISSSSKSKLPSSLQPRKTISIVSHSRLNPEKTQTQDCLEKKHIGK 60
           MALSS SSLSVKC+P+SSS KSKLPS LQPRK IS+V  S++NP+K QTQDC E+KHIGK
Sbjct: 1   MALSSISSLSVKCLPLSSS-KSKLPSCLQPRKPISLV--SQINPQKDQTQDCSERKHIGK 60

Query: 61  ISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA 120
            +EPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEA+TRGEFGIGSAAQFGSADLRKA
Sbjct: 61  STEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEAETRGEFGIGSAAQFGSADLRKA 120

Query: 121 VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA 180
           VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA
Sbjct: 121 VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA 180

Query: 181 NLTNAVLVRSVLTRSDLGGAIIEGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG 240
           N TNAVLVRSVLTRSDLGGAII GADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG
Sbjct: 181 NFTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG 240

Query: 241 CGNSRRNAYGTPSSPLLSAPPQQLLDHDGFCDQGTGLCEATK 282
           CGNSRRNAYGTPSSPLLSAPPQQLLD DGFCDQGTGLCEATK
Sbjct: 241 CGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 279

[Close]

BLAST of MC06g1331 vs. NCBI nr
Match: XP_022922205.1 (thylakoid lumenal protein TL20.3, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 499 bits (1286), Expect = 2.92e-177
Identity = 260/282 (92.20%), Postives = 270/282 (95.74%), Query Frame = 0


Query: 1   MALSSFSSLSVKCIPISSSSKSKLPSSLQPRKTISIVSHSRLNPEKTQTQDCLEKKHIGK 60
           MALSS SSLS+KC+P SSSSKSK+PSSLQPRK+ SIV  S++N +K QTQDC E+KHIGK
Sbjct: 1   MALSSVSSLSLKCLP-SSSSKSKVPSSLQPRKSFSIV--SQVNLQKDQTQDCSERKHIGK 60

Query: 61  ISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA 120
           ISEPKRWQK VSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA
Sbjct: 61  ISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA 120

Query: 121 VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA 180
           VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA
Sbjct: 121 VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA 180

Query: 181 NLTNAVLVRSVLTRSDLGGAIIEGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG 240
           NLTNAVLVRSVLTRSDLGGA I GADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG
Sbjct: 181 NLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG 240

Query: 241 CGNSRRNAYGTPSSPLLSAPPQQLLDHDGFCDQGTGLCEATK 282
           CGNSRRNAYGTPSSPLLSAPPQQLL+ DGFCD+GTGLCEATK
Sbjct: 241 CGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK 279

[Close]

BLAST of MC06g1331 vs. NCBI nr
Match: XP_022969875.1 (thylakoid lumenal protein TL20.3, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 499 bits (1285), Expect = 4.15e-177
Identity = 260/282 (92.20%), Postives = 270/282 (95.74%), Query Frame = 0


Query: 1   MALSSFSSLSVKCIPISSSSKSKLPSSLQPRKTISIVSHSRLNPEKTQTQDCLEKKHIGK 60
           MALSS SSLS+KC+P SSSSKSK+PSSLQPRK  SIV  S++N +K QTQDC E+KHIGK
Sbjct: 1   MALSSVSSLSLKCLP-SSSSKSKVPSSLQPRKPFSIV--SQVNLQKGQTQDCSERKHIGK 60

Query: 61  ISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA 120
           ISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA
Sbjct: 61  ISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA 120

Query: 121 VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA 180
           VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA
Sbjct: 121 VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA 180

Query: 181 NLTNAVLVRSVLTRSDLGGAIIEGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG 240
           NLTNAVLVRSVLTRSDLGGA I GADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG
Sbjct: 181 NLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG 240

Query: 241 CGNSRRNAYGTPSSPLLSAPPQQLLDHDGFCDQGTGLCEATK 282
           CGNSRRNAYGTPSSPLLSAPPQQLL+ DGFCD+GTGLCEA+K
Sbjct: 241 CGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEASK 279

[Close]

BLAST of MC06g1331 vs. NCBI nr
Match: XP_023550716.1 (thylakoid lumenal protein TL20.3, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 499 bits (1284), Expect = 5.90e-177
Identity = 260/282 (92.20%), Postives = 269/282 (95.39%), Query Frame = 0


Query: 1   MALSSFSSLSVKCIPISSSSKSKLPSSLQPRKTISIVSHSRLNPEKTQTQDCLEKKHIGK 60
           MALSS SSLS+KC+P SSSSKSK+PSSLQPRK  SIV  S++N +K QTQDC E+KHIGK
Sbjct: 1   MALSSVSSLSLKCLP-SSSSKSKVPSSLQPRKPFSIV--SQVNLQKDQTQDCSERKHIGK 60

Query: 61  ISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA 120
           ISEPKRWQK VSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA
Sbjct: 61  ISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA 120

Query: 121 VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA 180
           VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA
Sbjct: 121 VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA 180

Query: 181 NLTNAVLVRSVLTRSDLGGAIIEGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG 240
           NLTNAVLVRSVLTRSDLGGA I GADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG
Sbjct: 181 NLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG 240

Query: 241 CGNSRRNAYGTPSSPLLSAPPQQLLDHDGFCDQGTGLCEATK 282
           CGNSRRNAYGTPSSPLLSAPPQQLL+ DGFCD+GTGLCEATK
Sbjct: 241 CGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK 279

[Close]

BLAST of MC06g1331 vs. ExPASy TrEMBL
Match: A0A6J1DTJ6 (thylakoid lumenal protein TL20.3, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023358 PE=4 SV=1)

HSP 1 Score: 547 bits (1410), Expect = 1.99e-196
Identity = 281/282 (99.65%), Postives = 281/282 (99.65%), Query Frame = 0


Query: 1   MALSSFSSLSVKCIPISSSSKSKLPSSLQPRKTISIVSHSRLNPEKTQTQDCLEKKHIGK 60
           MALSSFSSLSVKCIPISSSSKSKLPSSLQPRKTISIVSHSRLNPEKTQTQDCLEKKHIGK
Sbjct: 1   MALSSFSSLSVKCIPISSSSKSKLPSSLQPRKTISIVSHSRLNPEKTQTQDCLEKKHIGK 60

Query: 61  ISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA 120
           ISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA
Sbjct: 61  ISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA 120

Query: 121 VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA 180
           VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA
Sbjct: 121 VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA 180

Query: 181 NLTNAVLVRSVLTRSDLGGAIIEGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG 240
           NLTNAVLVRSVLTRSDLGGAIIEGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG
Sbjct: 181 NLTNAVLVRSVLTRSDLGGAIIEGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG 240

Query: 241 CGNSRRNAYGTPSSPLLSAPPQQLLDHDGFCDQGTGLCEATK 282
           CGNSRRNAYGTPSSPLLSAPPQQLLD DGFCDQGTGLCEATK
Sbjct: 241 CGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 282

[Close]

BLAST of MC06g1331 vs. ExPASy TrEMBL
Match: A0A6J1E828 (thylakoid lumenal protein TL20.3, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430263 PE=4 SV=1)

HSP 1 Score: 499 bits (1286), Expect = 1.42e-177
Identity = 260/282 (92.20%), Postives = 270/282 (95.74%), Query Frame = 0


Query: 1   MALSSFSSLSVKCIPISSSSKSKLPSSLQPRKTISIVSHSRLNPEKTQTQDCLEKKHIGK 60
           MALSS SSLS+KC+P SSSSKSK+PSSLQPRK+ SIV  S++N +K QTQDC E+KHIGK
Sbjct: 1   MALSSVSSLSLKCLP-SSSSKSKVPSSLQPRKSFSIV--SQVNLQKDQTQDCSERKHIGK 60

Query: 61  ISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA 120
           ISEPKRWQK VSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA
Sbjct: 61  ISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA 120

Query: 121 VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA 180
           VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA
Sbjct: 121 VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA 180

Query: 181 NLTNAVLVRSVLTRSDLGGAIIEGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG 240
           NLTNAVLVRSVLTRSDLGGA I GADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG
Sbjct: 181 NLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG 240

Query: 241 CGNSRRNAYGTPSSPLLSAPPQQLLDHDGFCDQGTGLCEATK 282
           CGNSRRNAYGTPSSPLLSAPPQQLL+ DGFCD+GTGLCEATK
Sbjct: 241 CGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK 279

[Close]

BLAST of MC06g1331 vs. ExPASy TrEMBL
Match: A0A6J1I174 (thylakoid lumenal protein TL20.3, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468942 PE=4 SV=1)

HSP 1 Score: 499 bits (1285), Expect = 2.01e-177
Identity = 260/282 (92.20%), Postives = 270/282 (95.74%), Query Frame = 0


Query: 1   MALSSFSSLSVKCIPISSSSKSKLPSSLQPRKTISIVSHSRLNPEKTQTQDCLEKKHIGK 60
           MALSS SSLS+KC+P SSSSKSK+PSSLQPRK  SIV  S++N +K QTQDC E+KHIGK
Sbjct: 1   MALSSVSSLSLKCLP-SSSSKSKVPSSLQPRKPFSIV--SQVNLQKGQTQDCSERKHIGK 60

Query: 61  ISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA 120
           ISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA
Sbjct: 61  ISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA 120

Query: 121 VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA 180
           VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA
Sbjct: 121 VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA 180

Query: 181 NLTNAVLVRSVLTRSDLGGAIIEGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG 240
           NLTNAVLVRSVLTRSDLGGA I GADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG
Sbjct: 181 NLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG 240

Query: 241 CGNSRRNAYGTPSSPLLSAPPQQLLDHDGFCDQGTGLCEATK 282
           CGNSRRNAYGTPSSPLLSAPPQQLL+ DGFCD+GTGLCEA+K
Sbjct: 241 CGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEASK 279

[Close]

BLAST of MC06g1331 vs. ExPASy TrEMBL
Match: A0A1S3ATE2 (thylakoid lumenal protein TL20.3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103482643 PE=4 SV=1)

HSP 1 Score: 496 bits (1276), Expect = 5.09e-176
Identity = 257/284 (90.49%), Postives = 268/284 (94.37%), Query Frame = 0


Query: 1   MALSSFSSLSVKCIPISSSSKSKLPSSLQPRKTISIVSHSRLNPEKTQTQDCLEKKH--I 60
           MALSS SSLS KC+P++SS KSK PSSLQPRK IS V  S++NP+K QTQDC E+KH  I
Sbjct: 1   MALSSISSLSAKCLPLNSS-KSKHPSSLQPRKRISTV--SQINPQKDQTQDCSERKHAHI 60

Query: 61  GKISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLR 120
           GKI+EPKRWQKLVSTALAAAAVI FSSGMPS+AELNKYEADTRGEFGIGSAAQ+GSADLR
Sbjct: 61  GKITEPKRWQKLVSTALAAAAVIGFSSGMPSVAELNKYEADTRGEFGIGSAAQYGSADLR 120

Query: 121 KAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLN 180
           KAVH+NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLN
Sbjct: 121 KAVHINENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLN 180

Query: 181 EANLTNAVLVRSVLTRSDLGGAIIEGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRAS 240
           EAN TNAVLVRSVLTRSDLGGAII GADFSDAVIDLPQKQALCKYASGTNPVTGVSTRAS
Sbjct: 181 EANFTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRAS 240

Query: 241 LGCGNSRRNAYGTPSSPLLSAPPQQLLDHDGFCDQGTGLCEATK 282
           LGCGNSRRNAYGTPSSPLLSAPPQQLLD DGFCDQGTGLCEATK
Sbjct: 241 LGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 281

[Close]

BLAST of MC06g1331 vs. ExPASy TrEMBL
Match: A0A6J1E2Q9 (thylakoid lumenal protein TL20.3, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430263 PE=4 SV=1)

HSP 1 Score: 495 bits (1274), Expect = 1.06e-175
Identity = 258/283 (91.17%), Postives = 268/283 (94.70%), Query Frame = 0


Query: 1   MALSSFSSLSVKCIPISSSSKSKLPSSLQPRKTISIVSHSRLNPEKTQTQ-DCLEKKHIG 60
           MALSS SSLS+KC+P SSSSKSK+PSSLQPRK+ SIVS   L  ++TQ + DC E+KHIG
Sbjct: 1   MALSSVSSLSLKCLP-SSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQGEYDCSERKHIG 60

Query: 61  KISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRK 120
           KISEPKRWQK VSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRK
Sbjct: 61  KISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRK 120

Query: 121 AVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNE 180
           AVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNE
Sbjct: 121 AVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNE 180

Query: 181 ANLTNAVLVRSVLTRSDLGGAIIEGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASL 240
           ANLTNAVLVRSVLTRSDLGGA I GADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASL
Sbjct: 181 ANLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASL 240

Query: 241 GCGNSRRNAYGTPSSPLLSAPPQQLLDHDGFCDQGTGLCEATK 282
           GCGNSRRNAYGTPSSPLLSAPPQQLL+ DGFCD+GTGLCEATK
Sbjct: 241 GCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK 282

[Close]

BLAST of MC06g1331 vs. TAIR 10
Match: AT1G12250.1 (Pentapeptide repeat-containing protein )

HSP 1 Score: 359.8 bits (922), Expect = 2.1e-99
Identity = 200/281 (71.17%), Postives = 227/281 (80.78%), Query Frame = 0


Query: 1   MALSSFSSLSVKCIPI--SSSSKSKLPSSLQPRKTISIVSHSRLNPEKTQTQDCLEKKHI 60
           MA SS S L +K + I  SSSS S+ P   Q      +   SR N E   + +   ++  
Sbjct: 1   MAFSSLSPLPMKSLDISRSSSSVSRSPYHFQRYLLRRLQLSSRSNLEIKDSSN--TREGC 60

Query: 61  GKISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLR 120
              +E   W++++S A+ AAAVI+ SSG+P++AELN++EADTRGEFGIGSAAQ+GSADL 
Sbjct: 61  CSSAESNTWKRILSAAM-AAAVIASSSGVPAMAELNRFEADTRGEFGIGSAAQYGSADLS 120

Query: 121 KAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLN 180
           K VH NENFRRANFTSADMRESDFSG TFNGAYLEKAVAYK NFSGADLSDTLMDRMVLN
Sbjct: 121 KTVHSNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLN 180

Query: 181 EANLTNAVLVRSVLTRSDLGGAIIEGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRAS 240
           EANLTNAVLVRSVLTRSDLGGA IEGADFSDAVIDL QKQALCKYA+GTNP+TGV TR S
Sbjct: 181 EANLTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKS 240

Query: 241 LGCGNSRRNAYGTPSSPLLSAPPQQLLDHDGFCDQGTGLCE 280
           LGCGNSRRNAYG+PSSPLLSAPPQ+LL  DGFCD+ TGLC+
Sbjct: 241 LGCGNSRRNAYGSPSSPLLSAPPQRLLGRDGFCDEKTGLCD 278

[Close]

BLAST of MC06g1331 vs. TAIR 10
Match: AT1G12250.2 (Pentapeptide repeat-containing protein )

HSP 1 Score: 350.5 bits (898), Expect = 1.2e-96
Identity = 177/203 (87.19%), Postives = 190/203 (93.60%), Query Frame = 0


Query: 77  AAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSAD 136
           AAAVI+ SSG+P++AELN++EADTRGEFGIGSAAQ+GSADL K VH NENFRRANFTSAD
Sbjct: 2   AAAVIASSSGVPAMAELNRFEADTRGEFGIGSAAQYGSADLSKTVHSNENFRRANFTSAD 61

Query: 137 MRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSD 196
           MRESDFSG TFNGAYLEKAVAYK NFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSD
Sbjct: 62  MRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSD 121

Query: 197 LGGAIIEGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPL 256
           LGGA IEGADFSDAVIDL QKQALCKYA+GTNP+TGV TR SLGCGNSRRNAYG+PSSPL
Sbjct: 122 LGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGCGNSRRNAYGSPSSPL 181

Query: 257 LSAPPQQLLDHDGFCDQGTGLCE 280
           LSAPPQ+LL  DGFCD+ TGLC+
Sbjct: 182 LSAPPQRLLGRDGFCDEKTGLCD 204

[Close]

BLAST of MC06g1331 vs. TAIR 10
Match: AT5G53490.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 47.4 bits (111), Expect = 2.3e-05
Identity = 44/173 (25.43%), Postives = 76/173 (43.93%), Query Frame = 0


Query: 73  TALAAAAVISFSSGMPSIA-ELNKYE-ADTRGEFGIGSAAQFGSADLRKAVHVNE--NFR 132
           T   A+ VI+ +  +P ++ E ++ E A      G  +       DLR   + N+  N +
Sbjct: 67  TLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRFCDYTNDQTNLK 126

Query: 133 RANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLV 192
               ++A M  + F G       + KA A + +F G + ++ ++DR+   ++NL  AV  
Sbjct: 127 GKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVNFGKSNLKGAVFR 186

Query: 193 RSVLTRSDLGGAIIEGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC 242
            +VL+ S    A +E   F D +I     Q +C+     N       R  LGC
Sbjct: 187 NTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICR-----NESINEEGRLVLGC 234

[Close]

BLAST of MC06g1331 vs. TAIR 10
Match: AT5G53490.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 47.4 bits (111), Expect = 2.3e-05
Identity = 44/173 (25.43%), Postives = 76/173 (43.93%), Query Frame = 0


Query: 73  TALAAAAVISFSSGMPSIA-ELNKYE-ADTRGEFGIGSAAQFGSADLRKAVHVNE--NFR 132
           T   A+ VI+ +  +P ++ E ++ E A      G  +       DLR   + N+  N +
Sbjct: 68  TLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRFCDYTNDQTNLK 127

Query: 133 RANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLV 192
               ++A M  + F G       + KA A + +F G + ++ ++DR+   ++NL  AV  
Sbjct: 128 GKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVNFGKSNLKGAVFR 187

Query: 193 RSVLTRSDLGGAIIEGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC 242
            +VL+ S    A +E   F D +I     Q +C+     N       R  LGC
Sbjct: 188 NTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICR-----NESINEEGRLVLGC 235

[Close]

BLAST of MC06g1331 vs. TAIR 10
Match: AT5G53490.3 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 47.4 bits (111), Expect = 2.3e-05
Identity = 44/173 (25.43%), Postives = 76/173 (43.93%), Query Frame = 0


Query: 73  TALAAAAVISFSSGMPSIA-ELNKYE-ADTRGEFGIGSAAQFGSADLRKAVHVNE--NFR 132
           T   A+ VI+ +  +P ++ E ++ E A      G  +       DLR   + N+  N +
Sbjct: 82  TLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRFCDYTNDQTNLK 141

Query: 133 RANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLV 192
               ++A M  + F G       + KA A + +F G + ++ ++DR+   ++NL  AV  
Sbjct: 142 GKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVNFGKSNLKGAVFR 201

Query: 193 RSVLTRSDLGGAIIEGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC 242
            +VL+ S    A +E   F D +I     Q +C+     N       R  LGC
Sbjct: 202 NTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICR-----NESINEEGRLVLGC 249

The following BLAST results are available for this feature:

BLAST of MC06g1331 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H1Q1	2.9e-98	71.17	Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
B1WVN5	2.1e-16	39.26	Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 ...	[more]
Q52118	3.4e-06	35.58	Uncharacterized protein in mobD 3'region OS=Pantoea stewartii subsp. stewartii O...	[more]
Q55837	4.9e-05	36.36	Uncharacterized protein slr0516 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) ...	[more]
P81760	3.2e-04	25.43	Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]

BLAST of MC06g1331 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156469.1	4.12e-196	99.65	thylakoid lumenal protein TL20.3, chloroplastic isoform X1 [Momordica charantia]	[more]
XP_038875985.1	2.15e-179	92.55	thylakoid lumenal protein TL20.3, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_022922205.1	2.92e-177	92.20	thylakoid lumenal protein TL20.3, chloroplastic isoform X2 [Cucurbita moschata]	[more]
XP_022969875.1	4.15e-177	92.20	thylakoid lumenal protein TL20.3, chloroplastic isoform X2 [Cucurbita maxima]	[more]
XP_023550716.1	5.90e-177	92.20	thylakoid lumenal protein TL20.3, chloroplastic isoform X2 [Cucurbita pepo subsp...	[more]

BLAST of MC06g1331 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DTJ6	1.99e-196	99.65	thylakoid lumenal protein TL20.3, chloroplastic isoform X1 OS=Momordica charanti...	[more]
A0A6J1E828	1.42e-177	92.20	thylakoid lumenal protein TL20.3, chloroplastic isoform X2 OS=Cucurbita moschata...	[more]
A0A6J1I174	2.01e-177	92.20	thylakoid lumenal protein TL20.3, chloroplastic isoform X2 OS=Cucurbita maxima O...	[more]
A0A1S3ATE2	5.09e-176	90.49	thylakoid lumenal protein TL20.3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1E2Q9	1.06e-175	91.17	thylakoid lumenal protein TL20.3, chloroplastic isoform X1 OS=Cucurbita moschata...	[more]

BLAST of MC06g1331 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12250.1	2.1e-99	71.17	Pentapeptide repeat-containing protein	[more]
AT1G12250.2	1.2e-96	87.19	Pentapeptide repeat-containing protein	[more]
AT5G53490.2	2.3e-05	25.43	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G53490.1	2.3e-05	25.43	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G53490.3	2.3e-05	25.43	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.160.20.80		coord: 106..249 e-value: 2.2E-27 score: 96.9
None	No IPR available	PANTHER	PTHR47121	THYLAKOID LUMENAL PROTEIN TL20.3, CHLOROPLASTIC	coord: 1..280
None	No IPR available	SUPERFAMILY	141571	Pentapeptide repeat-like	coord: 110..211
IPR001646	Pentapeptide repeat	PFAM	PF00805	Pentapeptide	coord: 135..171 e-value: 7.9E-9 score: 35.0 coord: 177..209 e-value: 7.6E-7 score: 28.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g1331.1	MC06g1331.1	mRNA