MC05g_new0165 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC05g_new0165
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC05: 8812315 .. 8814970 (+)
RNA-Seq ExpressionMC05g_new0165
SyntenyMC05g_new0165
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAATTGAGGTATTACACGTTACTTTGAAAACATTTCTTCCCTATTTCGCATTACGTTCCGCCTCCTCCCTCTCTCTCGTCTAACTCCGGCAAAACTCGATGCGCTCTCATTCTCTTTTGCAAAACTCTGACGGCCCTCTCGTTATTTTCGGTGAAAGTCCACGGCTTCCTCGTTCTCTTCAGTGAAACTCCAACCGCGCACAGATCTGGTGATTGCCTTCCTCTTCTCCAACTCGCGACTTCCTCTTCCACAGTGGGTGGACAGAGATCTGGTGACCACAATAGGACTCCACCAGCCGCGGCACGACTCCCTCTTCGACGGTGGCGCAACTCAAATCTGGTAATTGGCTTGACTCTCTATTTTTCTTGTCAAATTAAAGCAATAAAAAGGATATTAGGGCAAAAAAAAGTTTTATTTGCACAGTTTATTCCTCCATTCCTTCATTCTAGATGTAAACTTCAATTTATTTTTGTATAAACTTAGGGTTGCTGTCCATTTACGCCAAGTTTTGGGGCTGCTGTAAATATGTTTAATTTTTAGGGTTGCTATAAAATTATGAATGAACTAAGAATGAAGAAATTATGGAGAAAAAAGGTTTATTTACGTTTCAATTCCTAATTTTTTTCATTCTAGATTGGGGTGGTAATGTGTAAACTTGGGGTTGGTGTCAATTACTTTCAAGGTTTGAAGTTGCTGTCAATTTATTGAGTTTTGGATTACTGTAAATTGATGAATAATATTGTAAACACTACTGATTTTCTTCTTCAAGTTTCTTCTGATGAGTAGTTTTTCTTTTTGTCAACCTGATCATAATATTTAGGTAGTGACATTCCTTAAATATTGTCATGTAGACAAGATATTTTAACCCTTAATTGTTGGCAAGATAAGCGACTTGATTTATTTCGGTGCAAGTTAGTTATTTTTGTGCTATCATTGTCATGACTACAAAATATTCTATTATGAAATTGCATTGTAATGTTCCTGCTTCATTATCTCTAAAACATACAAGTCTAAACTCTGTAGTTTTGACTTTCTTATTGATTATTATTACCATGTTCTATTTGTTCATGATTACTTTGTTGTGGGAACATTGATTTCTAAGAGATGGAAGAGCCATGTCGGGAGGTATTGCACGCTGTCATCTGGTTGAGGAGCGGAAGTTGTGGTGGAAAATCATCTGCATGTCTTCTAGCTACAAATGTAGTAGAGGTTCCTTCCCAATTTCTTTGATTTTGACACTCATTTTCGGACTCGGTTTTCTACTTTTCGCAGAGGAATAGGCCATATTTAGGATATTGTGCATCCTACACTCCCATCTAATCCTCGGAAGTCAATTTTATATCGTCTTTTAGTGATACATTTTTTAGCTGTTAGTATGACAAGCATACTTTTTTTACACTTGCTACTTTGTTAAATGGTTCCATTTGTTATATTGGCTTACTGAGTATTGACTCTCCACTAGGACATATAACTGAACATCTTTAATTGGAAATACTAGTTGGTAAGGGTTTTATATTATCATGTATGTGAGCTTTATTTTGCAGTTTCTAGCTCCAATTTGATTTGCGAGGAGATGCCAAGTGATGGGGATCTCTTGTTATATTTGTCAGCTTCAGTTGAGTGGTTTCTTCTAAATTTTGTAGTTTATTATTTTCCACTCCTCACTGAGAACTGCAATATTTTCCTCAATAAGCTATCAATTTAACTTGATTTTACTTATTTACAGTTTCTTTAGTCCATCCATGAATGTAATATTATCATGTTGGTTAATAATAGTTTTCACTTAAAGTTGTTTGTTATACATCTTCGAGACAATTGTGTTTATGTATTAGACTCTCTAGGAAGTAAGATTGAAGAAAATTATAAGGGAATCATAAACACGTAAGTGTCTTGAACTCTTATAGTTATAATTTTTATAATTATGTCATTCTAATGTTTCAAGTTATTTAGATCATTGAAAATGTGGCAAGCCAAACATTCTATTCAACATTGTCACAGTACTACAAGTTGGAAACTTGTGAAGGTAAATTTGCATTGGATTACATTTTAAATATGCTCAAATTTGCATTGAAATCTTTTGTTAACTCATAATTATGTTATTTTTTAAATTTTCTATATGTAGTGTCCTCATCAACTAGGTTCTATAGAGTGTGGGTATTATTTGCAAAATTATATACAAGAAATAGTGCGGAACCCTAATACTCCCATAACTGAACTTGTACGTATTATCATATACCTTTATGTGTTTATATATGCTTTATCCTTATTAATCAGTATTATCTTTCTTTTTTTGTAGTTTAATACAAAAAATGCCTACAAACAAGAAGAAATCGACGAAGTTCGAATAGAATGGACATCATTTGTTGGACGATTTGTGTAGTACCTATGGATTCATTACTTTTGTTTATTTGATGTAAGTATTTTGTTCGGGTTACTTTCTGTAGTAGTACTTAGTAGATTTGAAATACCTTGTCTTGTTTATAATATATAGAACTTTGGATTGTTATGCTAAATGCAGTTTTGTTGGAGGGACGGGCGGTCCCATTTGTTTCTGTGTGGAAGGGTGTTAATATATAGAAGTGTTTGGTTGTTGCTGAATGTAGTATATTATTGCTTTCTAAGTTAATTTTGAGTTATTCTAAAGTAGAGAGGTC

mRNA sequence

ATGTCGGGAGGTATTGCACGCTGTCATCTGGTTGAGGAGCGGAAGTTGTGGTGGAAAATCATCTGCATGTCTTCTAGCTACAAATGTAGTAGAGTTTCTAGCTCCAATTTGATTTGCGAGGAGATGCCAAGTGATGGGGATCTCTTGTTATATTTGTCAGCTTCAATCATTGAAAATGTGGCAAGCCAAACATTCTATTCAACATTGTCACAGTACTACAAGTTGGAAACTTGTGAAGTGTCCTCATCAACTAGGTTCTATAGAGTGTGGGTATTATTTGCAAAATTATATACAAGAAATAGTGCGGAACCCTAA

Coding sequence (CDS)

ATGTCGGGAGGTATTGCACGCTGTCATCTGGTTGAGGAGCGGAAGTTGTGGTGGAAAATCATCTGCATGTCTTCTAGCTACAAATGTAGTAGAGTTTCTAGCTCCAATTTGATTTGCGAGGAGATGCCAAGTGATGGGGATCTCTTGTTATATTTGTCAGCTTCAATCATTGAAAATGTGGCAAGCCAAACATTCTATTCAACATTGTCACAGTACTACAAGTTGGAAACTTGTGAAGTGTCCTCATCAACTAGGTTCTATAGAGTGTGGGTATTATTTGCAAAATTATATACAAGAAATAGTGCGGAACCCTAA

Protein sequence

MSGGIARCHLVEERKLWWKIICMSSSYKCSRVSSSNLICEEMPSDGDLLLYLSASIIENVASQTFYSTLSQYYKLETCEVSSSTRFYRVWVLFAKLYTRNSAEP
Homology
[Close]
BLAST of MC05g_new0165 vs. NCBI nr
Match: KAA0059274.1 (uncharacterized protein E6C27_scaffold430G002130 [Cucumis melo var. makuwa])

HSP 1 Score: 49.7 bits (117), Expect = 3.41e-04
Identity = 24/47 (51.06%), Postives = 34/47 (72.34%), Query Frame = 0 

Query: 55  SIIENVASQTFYSTLSQYYKLETCEVSSSTRFYRVWVLFAKLYTRNS 101
           +++E++ S+T   TLS   K+ETC+V SS  FYRVWVL AK  T+N+
Sbjct: 500 NVVEDMTSETRSITLSINSKMETCKVPSSIGFYRVWVLHAKFNTKNA 546

[Close]
BLAST of MC05g_new0165 vs. NCBI nr
Match: KAA0026270.1 (hypothetical protein E6C27_scaffold19G002720 [Cucumis melo var. makuwa])

HSP 1 Score: 49.7 bits (117), Expect = 3.48e-04
Identity = 25/45 (55.56%), Postives = 33/45 (73.33%), Query Frame = 0 

Query: 57  IENVASQTFYSTLSQYYKLETCEVSSSTRFYRVWVLFAKLYTRNS 101
           +E++ S+T  +TLS   K+E CEVSSS  FYRVWVL AK  T+N+
Sbjct: 634 VEDMVSETRSTTLSINSKMEICEVSSSIGFYRVWVLRAKFNTKNA 678

[Close]
BLAST of MC05g_new0165 vs. ExPASy TrEMBL
Match: A0A5A7UW21 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G002130 PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.65e-04
Identity = 24/47 (51.06%), Postives = 34/47 (72.34%), Query Frame = 0 

Query: 55  SIIENVASQTFYSTLSQYYKLETCEVSSSTRFYRVWVLFAKLYTRNS 101
           +++E++ S+T   TLS   K+ETC+V SS  FYRVWVL AK  T+N+
Sbjct: 500 NVVEDMTSETRSITLSINSKMETCKVPSSIGFYRVWVLHAKFNTKNA 546

[Close]
BLAST of MC05g_new0165 vs. ExPASy TrEMBL
Match: A0A5A7SJ90 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G002720 PE=4 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.68e-04
Identity = 25/45 (55.56%), Postives = 33/45 (73.33%), Query Frame = 0 

Query: 57  IENVASQTFYSTLSQYYKLETCEVSSSTRFYRVWVLFAKLYTRNS 101
           +E++ S+T  +TLS   K+E CEVSSS  FYRVWVL AK  T+N+
Sbjct: 634 VEDMVSETRSTTLSINSKMEICEVSSSIGFYRVWVLRAKFNTKNA 678

The following BLAST results are available for this feature:
BLAST of MC05g_new0165 vs.
Match NameE-valueIdentityDescription
BLAST of MC05g_new0165 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0059274.13.41e-0451.06uncharacterized protein E6C27_scaffold430G002130 [Cucumis melo var. makuwa][more]
KAA0026270.13.48e-0455.56hypothetical protein E6C27_scaffold19G002720 [Cucumis melo var. makuwa][more]
BLAST of MC05g_new0165 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UW211.65e-0451.06ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A5A7SJ901.68e-0455.56DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
BLAST of MC05g_new0165 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC05g_new0165.1MC05g_new0165.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016787 hydrolase activity