MC05g1611 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAATGGCGTTTACAACGGCAGCGACCAACAGCCGATGGAGCTTAACAGCATTGAGGGCAGCGCTACCTTCTGTGGGAGTAGAGATTCATACTCCCGCTCGCGTCAGCTTCCCGTCGGCCACTGGTCGAGTCAGTTGCAGAACCTGCAGCAAACCGATCGCCTCTTTTTCGGGTCTATGCCCTTTGAACCCTCTCATTTCTACTGGTTTATCAGGTAATTCCATTTACTCTCACTCGTTTTTTATATGGCCCCATCTAATTTGATTTTTCCTCTGCTAATTCATGCGTCTACTCTGCTTCTTATGGCAAACTGATTCATACCCTACTAATCGAATGGTTCTGCAATGTTTTATCGTTTAAAGTTTGATTTCTATTTGAATTGATTCGTCTCTTCTATTCGGCAGTGTTCTATATAAATTTTGTAGTGAAGTCGCCTGCTAATTTTGGTAACAATGGGAAATCTTAAGTTCATATTCGCTGAAAATGAAACATTGTTCACAGTTTCGTTCCACACCTATCAGGAAACAATTCGAGCGAATCTCTCTTGCCTAGCCGTGCTGCATTTTGTCTGTGGTACTCTTGTCAACCACAGGATTGGATTGGCTGGTATCCCGTGGTCCATCGTAGTTCAGAATTCTTTCAAAGGGTGGTTGGTAGGAATCTTGGGATTACCATAGGAACGACATTTAGTATTTGGTTAGTATTTTGATTGAATTCCTAGGCCTGGAATTATGATAAATATGCCCATTGATTGAAGTAGGTGGATTTTGCGGATTTCTATCATTAAGTATCCATCCTCCATTAACTTTCATTTTCTACTCCTACCCATTGACAAGCACGATAGCTCAAATATTTTCTTCCCTCGCGCTGCAACTACCTACGGGTCCTAGATTGAATTTCTTAGCGTCCCATCCGTTGCTCCTTTGCTTAGTGTTTCCCCTTGCCCTAATGTATTCAGACCTGAATTGAACACCTGTCTCTTGGGCACCACAATTTTATTCCCAACATTTTGTATCCATAGTACCGAGTGGTCTATAATGCGCTTGATTAATACATGGTTGAATATAAATTCTTCATATTAGATTAAAGTCTTGTGCATATGATATAATTGTTTCCCTCTATGGAGCCTATTATTACTTTCACATATTAATTGACAAGCTATGTTTATATTCCAACATTATTCTATGAAAGATAATACAAATTCCTAGATGCATTTGTTATACAAATACTCAATGCATTTCAGGTTATGAATTCAAGCCTTAGTCGATGAGGATTGTACAAGTTTCTTGACAGTGAATATCGTGGAGTTAGGCAATTAGCTTGTGAAATTAGATGATGTATGATATAAGCTAGCTCAGACGCCCATAATTTTAATAAGAATGATATGTAATCATCATGAGTTGATTTAGTTATCTTTAAGGTCCAATGTAAATAGTAAAAAGCTTAGAGAGAATAAGTTCAAACCATAGTGGCTACCTACCTATGATTTAATAGCTTATGAGTTACTTTGACAACCAAATGTAATAGGGTTAGTCAGTTGTCCTATGAGATTAGTTGAGGTGCACGGCCTGAACACTCACGGATATTAGAAAAATATAGAATAAGAATGATATGTTGTTATTTGTTACATAATTTTATCAAATAAATTCAGTTATTTTAATCCCGAGTTTCATACAAGTTCATGGGAGCAAGATCTTCAGACAGCTTTTTATTCAGTGTACTAACTACTGTAGAACCTGTGATGCGCTTGTCCAACATGCAGATTTTGACAGCTTTGAACATAATTTTACAATTGTTGATAGTGGTTGTCGATATTTTGCCATGAGACATGGCAAGCGGGTACCTAAGCTCAATAGGCCTCCTGACCAACGGCGTGCACTATTGCGAGGGCTCACTACCCAACTCCTTAAGCATGGTCGGATCAAAACCACCAGAGCGAGAGCAAGTGCTATGCGTAAGTATGTTGACAAAATGATAACATTAGCAAAGGAAGGTTCTTTGCATAAAAGGAGACAGGCTTTAGGGTTCGTCTACGAAAAACAAATTGTCCATGCTTTATTTGCAGAAGTCCAAGATAGGTATGGGGAGAGAAATGGTGGATATACCAGAATTATTAGAACACTGCCAAGGCGAGGGGACAATGCGCCTATGGCATACATTGAACTTGTC ATGGCAATGGCGTTTACAACGGCAGCGACCAACAGCCGATGGAGCTTAACAGCATTGAGGGCAGCGCTACCTTCTGTGGGAGTAGAGATTCATACTCCCGCTCGCGTCAGCTTCCCGTCGGCCACTGGTCGAGTCAGTTGCAGAACCTGCAGCAAACCGATCGCCTCTTTTTCGGGTCTATGCCCTTTGAACCCTCTCATTTCTACTGGTTTATCAGATTTTGACAGCTTTGAACATAATTTTACAATTGTTGATAGTGGTTGTCGATATTTTGCCATGAGACATGGCAAGCGGGTACCTAAGCTCAATAGGCCTCCTGACCAACGGCGTGCACTATTGCGAGGGCTCACTACCCAACTCCTTAAGCATGGTCGGATCAAAACCACCAGAGCGAGAGCAAGTGCTATGCGTAAGTATGTTGACAAAATGATAACATTAGCAAAGGAAGGTTCTTTGCATAAAAGGAGACAGGCTTTAGGGTTCGTCTACGAAAAACAAATTGTCCATGCTTTATTTGCAGAAGTCCAAGATAGGTATGGGGAGAGAAATGGTGGATATACCAGAATTATTAGAACACTGCCAAGGCGAGGGGACAATGCGCCTATGGCATACATTGAACTTGTC ATGGCAATGGCGTTTACAACGGCAGCGACCAACAGCCGATGGAGCTTAACAGCATTGAGGGCAGCGCTACCTTCTGTGGGAGTAGAGATTCATACTCCCGCTCGCGTCAGCTTCCCGTCGGCCACTGGTCGAGTCAGTTGCAGAACCTGCAGCAAACCGATCGCCTCTTTTTCGGGTCTATGCCCTTTGAACCCTCTCATTTCTACTGGTTTATCAGATTTTGACAGCTTTGAACATAATTTTACAATTGTTGATAGTGGTTGTCGATATTTTGCCATGAGACATGGCAAGCGGGTACCTAAGCTCAATAGGCCTCCTGACCAACGGCGTGCACTATTGCGAGGGCTCACTACCCAACTCCTTAAGCATGGTCGGATCAAAACCACCAGAGCGAGAGCAAGTGCTATGCGTAAGTATGTTGACAAAATGATAACATTAGCAAAGGAAGGTTCTTTGCATAAAAGGAGACAGGCTTTAGGGTTCGTCTACGAAAAACAAATTGTCCATGCTTTATTTGCAGAAGTCCAAGATAGGTATGGGGAGAGAAATGGTGGATATACCAGAATTATTAGAACACTGCCAAGGCGAGGGGACAATGCGCCTATGGCATACATTGAACTTGTC MAMAFTTAATNSRWSLTALRAALPSVGVEIHTPARVSFPSATGRVSCRTCSKPIASFSGLCPLNPLISTGLSDFDSFEHNFTIVDSGCRYFAMRHGKRVPKLNRPPDQRRALLRGLTTQLLKHGRIKTTRARASAMRKYVDKMITLAKEGSLHKRRQALGFVYEKQIVHALFAEVQDRYGERNGGYTRIIRTLPRRGDNAPMAYIELV Homology
BLAST of MC05g1611 vs. ExPASy Swiss-Prot
Match: Q9M385 (50S ribosomal protein L17, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL17 PE=2 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 8.7e-76 Identity = 150/208 (72.12%), Postives = 172/208 (82.69%), Query Frame = 0
BLAST of MC05g1611 vs. ExPASy Swiss-Prot
Match: O80363 (50S ribosomal protein L17, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPL17 PE=2 SV=1) HSP 1 Score: 276.9 bits (707), Expect = 1.8e-73 Identity = 140/204 (68.63%), Postives = 168/204 (82.35%), Query Frame = 0
BLAST of MC05g1611 vs. ExPASy Swiss-Prot
Match: P82194 (50S ribosomal protein L17, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL17 PE=1 SV=2) HSP 1 Score: 224.9 bits (572), Expect = 8.2e-58 Identity = 108/126 (85.71%), Postives = 122/126 (96.83%), Query Frame = 0
BLAST of MC05g1611 vs. ExPASy Swiss-Prot
Match: B1XJI3 (50S ribosomal protein L17 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=rplQ PE=3 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 1.2e-40 Identity = 79/116 (68.10%), Postives = 101/116 (87.07%), Query Frame = 0
BLAST of MC05g1611 vs. ExPASy Swiss-Prot
Match: A2CC52 (50S ribosomal protein L17 OS=Prochlorococcus marinus (strain MIT 9303) OX=59922 GN=rplQ PE=3 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 2.0e-40 Identity = 80/116 (68.97%), Postives = 98/116 (84.48%), Query Frame = 0
BLAST of MC05g1611 vs. NCBI nr
Match: XP_022157331.1 (50S ribosomal protein L17, chloroplastic [Momordica charantia]) HSP 1 Score: 411 bits (1056), Expect = 1.28e-144 Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0
BLAST of MC05g1611 vs. NCBI nr
Match: XP_038906261.1 (50S ribosomal protein L17, chloroplastic [Benincasa hispida]) HSP 1 Score: 357 bits (917), Expect = 1.98e-123 Identity = 181/208 (87.02%), Postives = 190/208 (91.35%), Query Frame = 0
BLAST of MC05g1611 vs. NCBI nr
Match: XP_008442307.1 (PREDICTED: 50S ribosomal protein L17 [Cucumis melo]) HSP 1 Score: 351 bits (901), Expect = 5.44e-121 Identity = 179/208 (86.06%), Postives = 187/208 (89.90%), Query Frame = 0
BLAST of MC05g1611 vs. NCBI nr
Match: XP_004137669.1 (50S ribosomal protein L17, chloroplastic [Cucumis sativus] >KGN58675.1 hypothetical protein Csa_001558 [Cucumis sativus]) HSP 1 Score: 348 bits (892), Expect = 1.37e-119 Identity = 177/208 (85.10%), Postives = 186/208 (89.42%), Query Frame = 0
BLAST of MC05g1611 vs. NCBI nr
Match: XP_022971252.1 (50S ribosomal protein L17, chloroplastic [Cucurbita maxima] >KAG7027848.1 50S ribosomal protein L17, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 347 bits (889), Expect = 3.93e-119 Identity = 177/210 (84.29%), Postives = 193/210 (91.90%), Query Frame = 0
BLAST of MC05g1611 vs. ExPASy TrEMBL
Match: A0A6J1DXR7 (50S ribosomal protein L17, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111024059 PE=3 SV=1) HSP 1 Score: 411 bits (1056), Expect = 6.21e-145 Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0
BLAST of MC05g1611 vs. ExPASy TrEMBL
Match: A0A1S3B652 (50S ribosomal protein L17 OS=Cucumis melo OX=3656 GN=LOC103486218 PE=3 SV=1) HSP 1 Score: 351 bits (901), Expect = 2.63e-121 Identity = 179/208 (86.06%), Postives = 187/208 (89.90%), Query Frame = 0
BLAST of MC05g1611 vs. ExPASy TrEMBL
Match: A0A0A0L9N9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G727930 PE=3 SV=1) HSP 1 Score: 348 bits (892), Expect = 6.65e-120 Identity = 177/208 (85.10%), Postives = 186/208 (89.42%), Query Frame = 0
BLAST of MC05g1611 vs. ExPASy TrEMBL
Match: A0A6J1I1G7 (50S ribosomal protein L17, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470028 PE=3 SV=1) HSP 1 Score: 347 bits (889), Expect = 1.90e-119 Identity = 177/210 (84.29%), Postives = 193/210 (91.90%), Query Frame = 0
BLAST of MC05g1611 vs. ExPASy TrEMBL
Match: A0A6J1GDC0 (50S ribosomal protein L17, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452972 PE=3 SV=1) HSP 1 Score: 343 bits (879), Expect = 6.36e-118 Identity = 175/210 (83.33%), Postives = 191/210 (90.95%), Query Frame = 0
BLAST of MC05g1611 vs. TAIR 10
Match: AT3G54210.1 (Ribosomal protein L17 family protein ) HSP 1 Score: 284.6 bits (727), Expect = 6.2e-77 Identity = 150/208 (72.12%), Postives = 172/208 (82.69%), Query Frame = 0
BLAST of MC05g1611 vs. TAIR 10
Match: AT5G09770.1 (Ribosomal protein L17 family protein ) HSP 1 Score: 107.8 bits (268), Expect = 1.0e-23 Identity = 54/108 (50.00%), Postives = 72/108 (66.67%), Query Frame = 0
BLAST of MC05g1611 vs. TAIR 10
Match: AT5G64650.1 (Ribosomal protein L17 family protein ) HSP 1 Score: 105.5 bits (262), Expect = 5.1e-23 Identity = 53/108 (49.07%), Postives = 72/108 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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