MC05g1013 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC05g1013
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionHydroxymethylglutaryl-CoA lyase
LocationMC05: 13429516 .. 13432878 (+)
RNA-Seq ExpressionMC05g1013
SyntenyMC05g1013
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAACTCGCCCATGGTTTTAATTACACCAACCTACGTGATTCCGTGCCAGATTTGTTGTAGTTCAATTCAATTGGGGGTATATCCATAATTACAGAATCTCTAAAATGTCAGAAAAGTTAAAATTGGATCAGTTGAGTCAATTTTTATAATTTAAGTTATTTGAGCAAAATAGAAAAATTTTTCAGGTCAGCTGAGTCAATTTCTCGATATTCTCTCGTACTCAAAATACAAAAACAAAAAAAGAAGAAAAAAATTAACCGACGCGAGCTCGAGCGACCAACCCAGCACCCTCACGACCTTCGGTATCTCCCTCGTGATCTTCGTCCTCCCGGCGGTACGATCCCCGACCGATCACACTCACGCCGACGGATCTTTCTGCGGCGGCGTAACCCCGACCCACGGCAGCCAGATATGCAGCGGTAACTTCCTTCCGGTCATAAACCAGCACAAACCGAAGCAATTTAAGCGGTAAAACTTTAGTTAACCAAGTTCGTTAACGTTGATTTAATTGGTTCTGTTTAGAATTCGGCCTGAATAGCTTCTGAACAATGAAAACCTCGTCTTTGTTTATTTTAGAAACTTCATTTCAGTCGAAATTTGTTTTCGTTAAAGGATTAAGATAAGTGGTTCCTTACTTGAATGGCTTGTTAAGTATGTAATTGATGCAAATTATTGATACTTAAGCCAGTTTTATAAACGTGGAGTTGATATAGCATGTTGGAATCGCTGATGAGAATATGTTTGGTGAATATACTGTGTGATGTATTTTCATGATGTGTGTAGTTATGAATTTTTGATATTGAAGTTGGATTATGGATTTGGGTTTTAGTTTCCTGAATCCTTGTGAAGAAAAATGCATAATTTGTTGAGTATGTGAAGCACATACTTTCATGATAGTAAAATGCATAATTAGTTTGGCTATGTTGAGCATATACATTCATATTAGTTTGGATTAGTTGAAAAGCAAGCATGTTGTTTCATTTAGACGAGATTGAATTTAGTATGCTTAAAGAAGAGGTTAATCTGGTTTACGCTTATCAAGAATTGGAATGGTATTAGTTTAGTCAATTTTATTATGTTGTGTAAGCTTGGTGACTATTGAAGTAGAACTTGCATTTTAAATAAGGATGGAGTCGTTTCAGTTTGATTTTTCATGCTAGTTTGATTGGAATTAAACGAAATGAACGAACACCAGTTCATTGATGGTTCAAAATTTATATGTTGAACCAATACATGAAATATATACATGTATACATGTCTATATAATCTTAGTTGGTTATAGAAGAAATTTTTTTTATGTAATCTTGACGTCGTCCTTTTTCTTGCTTTCTTACAATCTTACCAGATATTCATTGTTAGTATTGTTTACTGAAATGCAATGCAAGCTGCAAGGGTCTCTGCTAAATTGACTCGACGAGGTTTGTCTTGTTGCCATGCATATAATCCAACCATGGACACTTCAGGCCGATTTCTTGTTTCAACTTCTTCGCATGTGGGAGTCAACTTCTTCAAAAGACTTCCGATGAATAGCACAGAACGAGAAGTTGATGATTGCTGGTATGGACGAAAAACTTATTCATCTAAAACTCATGACCCAGTATATATGATTGCAATTATATAGTCTGATTATGATTTATGAGCTATGGGAAATCCTACAGTAAGTAGAATTAACCATAGCTTGTCGATTTGGTGTGACGTGAATATGGGCCATAGCTTTGAAGATTTTGTTTTGTATATAATTACTCGACTGTCAGCAATATCATGACTCATGGAAATGTGTTATAGGATTTTCCTTGGGTAAATGCAATAGAAACCTTACTTTGGGTCTGGTTAGGAAGAAACAACATTTGCATTTCCATTGAATATGTTGTTTAAGAAGAAACAACATATTCAATGGAAAGGCAAATGGTTGAAGGGGTTATTAGAATTAGAAAAATGTCAATTTCGCTTTGTTTTCCTACACATGGTGAATTTAACAATTACTGTCCCTTTGCAATTTATACAAATTAGGGCAGACTTCTGTAAGCTCTGTGGGGAGTTTGCTCCCTTATATGCATCATGCAATATACTTGGTTTATTGGGATCTGTAACTTGTGTACTAAAATCTAAAACTGTACTTTATCCATTATTACTTTTCTAATGACGTATACATTTAGATTAACCGTGGAATTTTTAGTATCTATTTCATGATTTTAAGTCTCATACTTTGGTTTGAATGTAACGCTGCATTTCTTCTTTCCAGTCAACAGGATGGAAGAGATGCAGCCCCTTTGAGAGAAAATAGCAGGAGATTGTCCCAGAGTGATATTCTAAAATGGGTAGTTCCTAGTACGAGATGTAAATATAGAGAGTCGAGTAATATTCATGACACCTGGCATTTATCGAATTGTCAAATGTCCACGATGACCTCAACAAAGGTGTTCCAAATTTTGGAATGACTTTTTTCCTTTGTTCTATTCTTGAGTTCCTATTCCAGTCAAGATCCCTATCCTTCTCTTATTTGTACCCTTGTCTCTTTATGTTATTCGCGAAAGAGTTGAAATGAGCTTTATTTTTTTTTAAATATCTGTAATTGTAACTTCTTGCAATGTTGTTTTCGATTGTAATTGTTATTGCCTATTATTGGGTTGTTTGATGAATTGTTGTTTCTGCTCTCCCAGTATTTATGCAATATTCCACAGTTCGTGAAGATTGTTGAAGTTGGTCCAAGAGACGGACTACAAAATGAAAAGCACATTATACCAACTTCTGTTAAGGTTGAATTGATAAAGATGCTAGTCTCTTCTGGGTTGCCTATTGTTGAAGCCACGAGTTTTGTCTCTCCAAAATGGGTACCGCAGGTAATTGGGTTTGATATTCTATGAACATGTTGATGGGTATATTTTCTGTTCCTGAAACAGTTCCTTTCTATCATTGTTCGTTCTTCTGGTGCTGCTCTTCCACTTTTCATGTGCTTTACCTTCATGTCTGTGTTTCTTGTACATATACTTATAATCTCCTGTCATATTTTCCTCATATTTTTCTCAGTTAGCAGATGCAAAAGATGTTATGGGGGGAATTAAAAATGTTGAAGGTGCTCGATTTCCTGTGTTAACTCCAAATATTAAAGTATGCATTCTTCAAGAGTAATAAAAAGTTAGGACTAATCTGGAAAGAATTTTGTGATAATTGATGAGGTTTTTGGATCTTTTTGTCTAGGGTTTTGAAGCAGCTGTTTCAGCTGGAGCAAAGGAAGTTGCCATCTTTGCTTCAGCTTCCGAATCCTTCTCAAAGTCAAACATAAATTGCAGCATAGAAGAAAGTCTACGCCGTTACCATGAAGTTGCTGTTGCTGCAAGAAAACACGCCCTTCCAGTTCGTGG

mRNA sequence

GGAACTCGCCCATGGTTTTAATTACACCAACCTACGTGATTCCGTGCCAGATTTGTTGTAGTTCAATTCAATTGGGGGTATATCCATAATTACAGAATCTCTAAAATGTCAGAAAAGTTAAAATTGGATCAGTTGAGTCAATTTTTATAATTTAAGTTATTTGAGCAAAATAGAAAAATTTTTCAGGTCAGCTGAGTCAATTTCTCGATATTCTCTCGTACTCAAAATACAAAAACAAAAAAAGAAGAAAAAAATTAACCGACGCGAGCTCGAGCGACCAACCCAGCACCCTCACGACCTTCGGTATCTCCCTCGTGATCTTCGTCCTCCCGGCGGTACGATCCCCGACCGATCACACTCACGCCGACGGATCTTTCTGCGGCGGCGTAACCCCGACCCACGGCAGCCAGATATGCAGCGGTAACTTCCTTCCGGTCATAAACCAGCACAAACCGAAGCAATTTAAGCGATATTCATTGTTAGTATTGTTTACTGAAATGCAATGCAAGCTGCAAGGGTCTCTGCTAAATTGACTCGACGAGGTTTGTCTTGTTGCCATGCATATAATCCAACCATGGACACTTCAGGCCGATTTCTTGTTTCAACTTCTTCGCATGTGGGAGTCAACTTCTTCAAAAGACTTCCGATGAATAGCACAGAACGAGAAGTTGATGATTGCTGTCAACAGGATGGAAGAGATGCAGCCCCTTTGAGAGAAAATAGCAGGAGATTGTCCCAGAGTGATATTCTAAAATGGTATTTATGCAATATTCCACAGTTCGTGAAGATTGTTGAAGTTGGTCCAAGAGACGGACTACAAAATGAAAAGCACATTATACCAACTTCTGTTAAGGTTGAATTGATAAAGATGCTAGTCTCTTCTGGGTTGCCTATTGTTGAAGCCACGAGTTTTGTCTCTCCAAAATGGGTACCGCAGTTAGCAGATGCAAAAGATGTTATGGGGGGAATTAAAAATGTTGAAGGTGCTCGATTTCCTGTGTTAACTCCAAATATTAAAGGTTTTGAAGCAGCTGTTTCAGCTGGAGCAAAGGAAGTTGCCATCTTTGCTTCAGCTTCCGAATCCTTCTCAAAGTCAAACATAAATTGCAGCATAGAAGAAAGTCTACGCCGTTACCATGAAGTTGCTGTTGCTGCAAGAAAACACGCCCTTCCAGTTCGTGG

Coding sequence (CDS)

ATGCAAGCTGCAAGGGTCTCTGCTAAATTGACTCGACGAGGTTTGTCTTGTTGCCATGCATATAATCCAACCATGGACACTTCAGGCCGATTTCTTGTTTCAACTTCTTCGCATGTGGGAGTCAACTTCTTCAAAAGACTTCCGATGAATAGCACAGAACGAGAAGTTGATGATTGCTGTCAACAGGATGGAAGAGATGCAGCCCCTTTGAGAGAAAATAGCAGGAGATTGTCCCAGAGTGATATTCTAAAATGGTATTTATGCAATATTCCACAGTTCGTGAAGATTGTTGAAGTTGGTCCAAGAGACGGACTACAAAATGAAAAGCACATTATACCAACTTCTGTTAAGGTTGAATTGATAAAGATGCTAGTCTCTTCTGGGTTGCCTATTGTTGAAGCCACGAGTTTTGTCTCTCCAAAATGGGTACCGCAGTTAGCAGATGCAAAAGATGTTATGGGGGGAATTAAAAATGTTGAAGGTGCTCGATTTCCTGTGTTAACTCCAAATATTAAAGGTTTTGAAGCAGCTGTTTCAGCTGGAGCAAAGGAAGTTGCCATCTTTGCTTCAGCTTCCGAATCCTTCTCAAAGTCAAACATAAATTGCAGCATAGAAGAAAGTCTACGCCGTTACCATGAAGTTGCTGTTGCTGCAAGAAAACACGCCCTTCCAGTTCGTGG

Protein sequence

MQAARVSAKLTRRGLSCCHAYNPTMDTSGRFLVSTSSHVGVNFFKRLPMNSTEREVDDCCQQDGRDAAPLRENSRRLSQSDILKWYLCNIPQFVKIVEVGPRDGLQNEKHIIPTSVKVELIKMLVSSGLPIVEATSFVSPKWVPQLADAKDVMGGIKNVEGARFPVLTPNIKGFEAAVSAGAKEVAIFASASESFSKSNINCSIEESLRRYHEVAVAARKHALPVR
Homology
BLAST of MC05g1013 vs. ExPASy Swiss-Prot
Match: O81027 (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HMGCL PE=1 SV=2)

HSP 1 Score: 221.5 bits (563), Expect = 9.8e-57
Identity = 111/137 (81.02%), Postives = 126/137 (91.97%), Query Frame = 0

Query: 90  IPQFVKIVEVGPRDGLQNEKHIIPTSVKVELIKMLVSSGLPIVEATSFVSPKWVPQLADA 149
           IP+FVKIVEVGPRDGLQNEK+I+PTSVKVELI+ LVSSGLP+VEATSFVSPKWVPQLADA
Sbjct: 164 IPKFVKIVEVGPRDGLQNEKNIVPTSVKVELIQRLVSSGLPVVEATSFVSPKWVPQLADA 223

Query: 150 KDVMGGIKNVEGARFPVLTPNIKGFEAAVSAGAKEVAIFASASESFSKSNINCSIEESLR 209
           KDVM  +  ++GAR PVLTPN+KGF+AAVSAGAKEVAIFASASESFS SNINC+IEESL 
Sbjct: 224 KDVMDAVNTLDGARLPVLTPNLKGFQAAVSAGAKEVAIFASASESFSLSNINCTIEESLL 283

Query: 210 RYHEVAVAARKHALPVR 227
           RY  VA AA++H++PVR
Sbjct: 284 RYRVVATAAKEHSVPVR 300

BLAST of MC05g1013 vs. ExPASy Swiss-Prot
Match: P35915 (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Gallus gallus OX=9031 GN=HMGCL PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.2e-46
Identity = 91/136 (66.91%), Postives = 112/136 (82.35%), Query Frame = 0

Query: 91  PQFVKIVEVGPRDGLQNEKHIIPTSVKVELIKMLVSSGLPIVEATSFVSPKWVPQLADAK 150
           PQ VK+VEVGPRDGLQNEK ++PT VK+ LI ML  +GLP++EATSFVSP+WVPQ+AD  
Sbjct: 3   PQRVKVVEVGPRDGLQNEKSVVPTPVKIRLIDMLSETGLPVIEATSFVSPRWVPQMADHA 62

Query: 151 DVMGGIKNVEGARFPVLTPNIKGFEAAVSAGAKEVAIFASASESFSKSNINCSIEESLRR 210
           +VM GI  + G  +PVLTPN+KGF+AAV+AGAKEV+IF +ASE F+K NINCSIEESL R
Sbjct: 63  EVMQGINKLPGVSYPVLTPNLKGFQAAVAAGAKEVSIFGAASELFTKKNINCSIEESLER 122

Query: 211 YHEVAVAARKHALPVR 227
           + EV  AAR  ++PVR
Sbjct: 123 FSEVMNAARAASIPVR 138

BLAST of MC05g1013 vs. ExPASy Swiss-Prot
Match: Q29448 (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Bos taurus OX=9913 GN=HMGCL PE=2 SV=2)

HSP 1 Score: 184.9 bits (468), Expect = 1.0e-45
Identity = 91/136 (66.91%), Postives = 112/136 (82.35%), Query Frame = 0

Query: 91  PQFVKIVEVGPRDGLQNEKHIIPTSVKVELIKMLVSSGLPIVEATSFVSPKWVPQLADAK 150
           P+ VKIVEVGPRDGLQNEK+I+PT VK++LI ML  +GLP+VEATSFVSPKWVPQ+AD  
Sbjct: 30  PKQVKIVEVGPRDGLQNEKNIVPTPVKIKLIDMLSEAGLPVVEATSFVSPKWVPQMADHA 89

Query: 151 DVMGGIKNVEGARFPVLTPNIKGFEAAVSAGAKEVAIFASASESFSKSNINCSIEESLRR 210
           +V+ GI+   G  +PVLTPN KGF+AAV+AGAKEVAIF +ASE F+K NINCSI+ESL+R
Sbjct: 90  EVLKGIQKFPGVNYPVLTPNFKGFQAAVAAGAKEVAIFGAASELFTKKNINCSIDESLQR 149

Query: 211 YHEVAVAARKHALPVR 227
           + E+  AAR   + VR
Sbjct: 150 FDEILKAARAAGISVR 165

BLAST of MC05g1013 vs. ExPASy Swiss-Prot
Match: A8WG57 (3-hydroxy-3-methylglutaryl-CoA lyase, cytoplasmic OS=Danio rerio OX=7955 GN=hmgcll1 PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.0e-45
Identity = 89/140 (63.57%), Postives = 113/140 (80.71%), Query Frame = 0

Query: 87  LCNIPQFVKIVEVGPRDGLQNEKHIIPTSVKVELIKMLVSSGLPIVEATSFVSPKWVPQL 146
           L  +P +VKIVEVGPRDGLQNEK I+PT VK++LI +L  +GLP++EATSFVS KWV Q+
Sbjct: 36  LPKLPVYVKIVEVGPRDGLQNEKEIVPTEVKIQLIDLLSQTGLPVIEATSFVSSKWVAQM 95

Query: 147 ADAKDVMGGIKNVEGARFPVLTPNIKGFEAAVSAGAKEVAIFASASESFSKSNINCSIEE 206
           AD   V+ GIK     R+PVLTPNI+GF+AAV+AGA EVA+F SASE+FS+ NINCSIEE
Sbjct: 96  ADHTAVLKGIKRSPDVRYPVLTPNIQGFQAAVAAGANEVAVFGSASETFSRKNINCSIEE 155

Query: 207 SLRRYHEVAVAARKHALPVR 227
           SL+R+ +V  AA++  +PVR
Sbjct: 156 SLQRFEQVVSAAKQEGIPVR 175

BLAST of MC05g1013 vs. ExPASy Swiss-Prot
Match: P97519 (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcl PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.9e-44
Identity = 88/137 (64.23%), Postives = 111/137 (81.02%), Query Frame = 0

Query: 90  IPQFVKIVEVGPRDGLQNEKHIIPTSVKVELIKMLVSSGLPIVEATSFVSPKWVPQLADA 149
           +P+ VKIVEVGPRDGLQNEK I+PT VK++LI ML  +GLP++EATSFVSPKWVPQ+AD 
Sbjct: 29  LPKRVKIVEVGPRDGLQNEKSIVPTPVKIKLIDMLSEAGLPVIEATSFVSPKWVPQMADH 88

Query: 150 KDVMGGIKNVEGARFPVLTPNIKGFEAAVSAGAKEVAIFASASESFSKSNINCSIEESLR 209
            DV+ GI+   G  +PVLTPN+KGFE AV+AGAKEV+IF +ASE F++ N+NCSIEES +
Sbjct: 89  SDVLKGIQKFPGINYPVLTPNMKGFEEAVAAGAKEVSIFGAASELFTRKNVNCSIEESFQ 148

Query: 210 RYHEVAVAARKHALPVR 227
           R+  V  AAR  ++ VR
Sbjct: 149 RFDGVMQAARAASISVR 165

BLAST of MC05g1013 vs. NCBI nr
Match: XP_022153949.1 (hydroxymethylglutaryl-CoA lyase, mitochondrial-like [Momordica charantia] >XP_022153950.1 hydroxymethylglutaryl-CoA lyase, mitochondrial-like [Momordica charantia])

HSP 1 Score: 428 bits (1100), Expect = 1.60e-147
Identity = 226/259 (87.26%), Postives = 226/259 (87.26%), Query Frame = 0

Query: 1   MQAARVSAKLTRRGLSCCHAYNPTMDTSGRFLVSTSSHVGVNFFKRLPMNSTEREVDDCC 60
           MQAARVSAKLTRRGLSCCHAYNPTMDTSGRFLVSTSSHVGVNFFKRLPMNSTEREVDDCC
Sbjct: 1   MQAARVSAKLTRRGLSCCHAYNPTMDTSGRFLVSTSSHVGVNFFKRLPMNSTEREVDDCC 60

Query: 61  QQDGRDAAPLRENSRRLSQSDILKW---------------------------------YL 120
           QQDGRDAAPLRENSRRLSQSDILKW                                 YL
Sbjct: 61  QQDGRDAAPLRENSRRLSQSDILKWVVPSTRCKYRESSNIHDTWHLSNCQMSTMTSTKYL 120

Query: 121 CNIPQFVKIVEVGPRDGLQNEKHIIPTSVKVELIKMLVSSGLPIVEATSFVSPKWVPQLA 180
           CNIPQFVKIVEVGPRDGLQNEKHIIPTSVKVELIKMLVSSGLPIVEATSFVSPKWVPQLA
Sbjct: 121 CNIPQFVKIVEVGPRDGLQNEKHIIPTSVKVELIKMLVSSGLPIVEATSFVSPKWVPQLA 180

Query: 181 DAKDVMGGIKNVEGARFPVLTPNIKGFEAAVSAGAKEVAIFASASESFSKSNINCSIEES 226
           DAKDVMGGIKNVEGARFPVLTPNIKGFEAAVSAGAKEVAIFASASESFSKSNINCSIEES
Sbjct: 181 DAKDVMGGIKNVEGARFPVLTPNIKGFEAAVSAGAKEVAIFASASESFSKSNINCSIEES 240

BLAST of MC05g1013 vs. NCBI nr
Match: KAG6580930.1 (Hydroxymethylglutaryl-CoA lyase, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 330 bits (847), Expect = 6.36e-110
Identity = 182/227 (80.18%), Postives = 194/227 (85.46%), Query Frame = 0

Query: 1   MQAARVSAKLTRRGLSCCHAYNPTMDTSGRFLVSTS-SHVGVNFFKRLPMNSTEREVDDC 60
           MQAA+VSAKLTRRGLS  H YNPTM  S RFL S+S SHVGV+    L +     EVD+C
Sbjct: 1   MQAAKVSAKLTRRGLSWRHGYNPTMRISSRFLSSSSASHVGVSSTNGLGIQG---EVDNC 60

Query: 61  CQQDGRDAAPLRENSRRLSQSDILKWYLCNIPQFVKIVEVGPRDGLQNEKHIIPTSVKVE 120
           CQQDG DA   REN RRLSQ      YL +IPQFVKIVEVGPRDGLQNEKHI+PT+VKVE
Sbjct: 61  CQQDGGDAVLSRENKRRLSQ------YLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVE 120

Query: 121 LIKMLVSSGLPIVEATSFVSPKWVPQLADAKDVMGGIKNVEGARFPVLTPNIKGFEAAVS 180
           LIKMLVSSGL +VEATSFVSPKWVPQLADA DVM GI+NVEGARFPVLTPNIKGFEAAV+
Sbjct: 121 LIKMLVSSGLRVVEATSFVSPKWVPQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVA 180

Query: 181 AGAKEVAIFASASESFSKSNINCSIEESLRRYHEVAVAARKHALPVR 226
           AGAKEVAIFASASESFSKSNINCSIEESLRRYHEVAVAARKH+LPVR
Sbjct: 181 AGAKEVAIFASASESFSKSNINCSIEESLRRYHEVAVAARKHSLPVR 218

BLAST of MC05g1013 vs. NCBI nr
Match: XP_023526450.1 (hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023526451.1 hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327 bits (839), Expect = 1.53e-108
Identity = 182/227 (80.18%), Postives = 192/227 (84.58%), Query Frame = 0

Query: 1   MQAARVSAKLTRRGLSCCHAYNPTMDTSGRFLVSTS-SHVGVNFFKRLPMNSTEREVDDC 60
           MQAA+VSAKLTRRGLS  H YNPTM  S RFL S+S SHVGV     L +     EVD+C
Sbjct: 1   MQAAKVSAKLTRRGLSWRHGYNPTMRISSRFLSSSSASHVGVTSTNGLGIQG---EVDNC 60

Query: 61  CQQDGRDAAPLRENSRRLSQSDILKWYLCNIPQFVKIVEVGPRDGLQNEKHIIPTSVKVE 120
           CQQDG DA   REN RRLSQ      YL +IPQFVKIVEVGPRDGLQNEKHI+PT+VKVE
Sbjct: 61  CQQDGGDAVLSRENKRRLSQ------YLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVE 120

Query: 121 LIKMLVSSGLPIVEATSFVSPKWVPQLADAKDVMGGIKNVEGARFPVLTPNIKGFEAAVS 180
           LIKMLVSSGL IVEATSFVSPKWVPQLADA DVM GI+NVEGARFPVLTPNIKGFEAAV+
Sbjct: 121 LIKMLVSSGLRIVEATSFVSPKWVPQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVA 180

Query: 181 AGAKEVAIFASASESFSKSNINCSIEESLRRYHEVAVAARKHALPVR 226
           AGAKEVAIFASASESFSKSNINCSIEESLRRY EVAVAARKH+LPVR
Sbjct: 181 AGAKEVAIFASASESFSKSNINCSIEESLRRYREVAVAARKHSLPVR 218

BLAST of MC05g1013 vs. NCBI nr
Match: XP_022934490.1 (hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 326 bits (835), Expect = 6.16e-108
Identity = 180/227 (79.30%), Postives = 192/227 (84.58%), Query Frame = 0

Query: 1   MQAARVSAKLTRRGLSCCHAYNPTMDTSGRFLVSTS-SHVGVNFFKRLPMNSTEREVDDC 60
           MQAA+VSAKLTRRGLS  H YNPTM  S RFL S+S SHVGV+    L +     EVD+C
Sbjct: 1   MQAAKVSAKLTRRGLSWRHGYNPTMRISSRFLSSSSASHVGVSSTNGLGIQG---EVDNC 60

Query: 61  CQQDGRDAAPLRENSRRLSQSDILKWYLCNIPQFVKIVEVGPRDGLQNEKHIIPTSVKVE 120
           CQQDG D    REN RRLSQ      YL +IPQFVKIVEVGPRDGLQNEKHI+PT+VKVE
Sbjct: 61  CQQDGGDVVLSRENKRRLSQ------YLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVE 120

Query: 121 LIKMLVSSGLPIVEATSFVSPKWVPQLADAKDVMGGIKNVEGARFPVLTPNIKGFEAAVS 180
           LIKMLVSSGL +VEATSFVSPKWVPQLADA DVM GI+NVEGARFPVLTPNIKGFEAAV+
Sbjct: 121 LIKMLVSSGLRVVEATSFVSPKWVPQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVA 180

Query: 181 AGAKEVAIFASASESFSKSNINCSIEESLRRYHEVAVAARKHALPVR 226
           AGAKEVAIFASASESFSKSNINCSIEESLRRY EVAVAARKH+LPVR
Sbjct: 181 AGAKEVAIFASASESFSKSNINCSIEESLRRYREVAVAARKHSLPVR 218

BLAST of MC05g1013 vs. NCBI nr
Match: XP_022983796.1 (hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 322 bits (825), Expect = 1.58e-107
Identity = 180/227 (79.30%), Postives = 191/227 (84.14%), Query Frame = 0

Query: 1   MQAARVSAKLTRRGLSCCHAYNPTMDTSGRFLVSTS-SHVGVNFFKRLPMNSTEREVDDC 60
           MQAA+VSAKLTRRGLS  H YNPTM  S RFL S+S SHVGV+    L +     EV +C
Sbjct: 2   MQAAKVSAKLTRRGLSWRHGYNPTMRISSRFLSSSSASHVGVSSTNGLGIQG---EVHNC 61

Query: 61  CQQDGRDAAPLRENSRRLSQSDILKWYLCNIPQFVKIVEVGPRDGLQNEKHIIPTSVKVE 120
           CQQDG DA   REN RRLSQ      YL +IPQFVKIVEVGPRDGLQNEKHI+PT+VKVE
Sbjct: 62  CQQDGGDAVLSRENKRRLSQ------YLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVE 121

Query: 121 LIKMLVSSGLPIVEATSFVSPKWVPQLADAKDVMGGIKNVEGARFPVLTPNIKGFEAAVS 180
           LIKMLVSSGL IVEATSFVSPKWVPQLADA DVM GI+NVEGARFPVLTPNIKGFEAAV+
Sbjct: 122 LIKMLVSSGLRIVEATSFVSPKWVPQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVA 181

Query: 181 AGAKEVAIFASASESFSKSNINCSIEESLRRYHEVAVAARKHALPVR 226
           AGAKEVAIFASASESFSKSNINCSIEESLRRY EVAVAARK +LPVR
Sbjct: 182 AGAKEVAIFASASESFSKSNINCSIEESLRRYREVAVAARKQSLPVR 219

BLAST of MC05g1013 vs. ExPASy TrEMBL
Match: A0A6J1DIA6 (Hydroxymethylglutaryl-CoA lyase OS=Momordica charantia OX=3673 GN=LOC111021337 PE=3 SV=1)

HSP 1 Score: 428 bits (1100), Expect = 7.73e-148
Identity = 226/259 (87.26%), Postives = 226/259 (87.26%), Query Frame = 0

Query: 1   MQAARVSAKLTRRGLSCCHAYNPTMDTSGRFLVSTSSHVGVNFFKRLPMNSTEREVDDCC 60
           MQAARVSAKLTRRGLSCCHAYNPTMDTSGRFLVSTSSHVGVNFFKRLPMNSTEREVDDCC
Sbjct: 1   MQAARVSAKLTRRGLSCCHAYNPTMDTSGRFLVSTSSHVGVNFFKRLPMNSTEREVDDCC 60

Query: 61  QQDGRDAAPLRENSRRLSQSDILKW---------------------------------YL 120
           QQDGRDAAPLRENSRRLSQSDILKW                                 YL
Sbjct: 61  QQDGRDAAPLRENSRRLSQSDILKWVVPSTRCKYRESSNIHDTWHLSNCQMSTMTSTKYL 120

Query: 121 CNIPQFVKIVEVGPRDGLQNEKHIIPTSVKVELIKMLVSSGLPIVEATSFVSPKWVPQLA 180
           CNIPQFVKIVEVGPRDGLQNEKHIIPTSVKVELIKMLVSSGLPIVEATSFVSPKWVPQLA
Sbjct: 121 CNIPQFVKIVEVGPRDGLQNEKHIIPTSVKVELIKMLVSSGLPIVEATSFVSPKWVPQLA 180

Query: 181 DAKDVMGGIKNVEGARFPVLTPNIKGFEAAVSAGAKEVAIFASASESFSKSNINCSIEES 226
           DAKDVMGGIKNVEGARFPVLTPNIKGFEAAVSAGAKEVAIFASASESFSKSNINCSIEES
Sbjct: 181 DAKDVMGGIKNVEGARFPVLTPNIKGFEAAVSAGAKEVAIFASASESFSKSNINCSIEES 240

BLAST of MC05g1013 vs. ExPASy TrEMBL
Match: A0A6J1F7V0 (Hydroxymethylglutaryl-CoA lyase OS=Cucurbita moschata OX=3662 GN=LOC111441653 PE=3 SV=1)

HSP 1 Score: 326 bits (835), Expect = 2.98e-108
Identity = 180/227 (79.30%), Postives = 192/227 (84.58%), Query Frame = 0

Query: 1   MQAARVSAKLTRRGLSCCHAYNPTMDTSGRFLVSTS-SHVGVNFFKRLPMNSTEREVDDC 60
           MQAA+VSAKLTRRGLS  H YNPTM  S RFL S+S SHVGV+    L +     EVD+C
Sbjct: 1   MQAAKVSAKLTRRGLSWRHGYNPTMRISSRFLSSSSASHVGVSSTNGLGIQG---EVDNC 60

Query: 61  CQQDGRDAAPLRENSRRLSQSDILKWYLCNIPQFVKIVEVGPRDGLQNEKHIIPTSVKVE 120
           CQQDG D    REN RRLSQ      YL +IPQFVKIVEVGPRDGLQNEKHI+PT+VKVE
Sbjct: 61  CQQDGGDVVLSRENKRRLSQ------YLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVE 120

Query: 121 LIKMLVSSGLPIVEATSFVSPKWVPQLADAKDVMGGIKNVEGARFPVLTPNIKGFEAAVS 180
           LIKMLVSSGL +VEATSFVSPKWVPQLADA DVM GI+NVEGARFPVLTPNIKGFEAAV+
Sbjct: 121 LIKMLVSSGLRVVEATSFVSPKWVPQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVA 180

Query: 181 AGAKEVAIFASASESFSKSNINCSIEESLRRYHEVAVAARKHALPVR 226
           AGAKEVAIFASASESFSKSNINCSIEESLRRY EVAVAARKH+LPVR
Sbjct: 181 AGAKEVAIFASASESFSKSNINCSIEESLRRYREVAVAARKHSLPVR 218

BLAST of MC05g1013 vs. ExPASy TrEMBL
Match: A0A6J1J3E3 (Hydroxymethylglutaryl-CoA lyase OS=Cucurbita maxima OX=3661 GN=LOC111482306 PE=3 SV=1)

HSP 1 Score: 322 bits (825), Expect = 7.65e-108
Identity = 180/227 (79.30%), Postives = 191/227 (84.14%), Query Frame = 0

Query: 1   MQAARVSAKLTRRGLSCCHAYNPTMDTSGRFLVSTS-SHVGVNFFKRLPMNSTEREVDDC 60
           MQAA+VSAKLTRRGLS  H YNPTM  S RFL S+S SHVGV+    L +     EV +C
Sbjct: 2   MQAAKVSAKLTRRGLSWRHGYNPTMRISSRFLSSSSASHVGVSSTNGLGIQG---EVHNC 61

Query: 61  CQQDGRDAAPLRENSRRLSQSDILKWYLCNIPQFVKIVEVGPRDGLQNEKHIIPTSVKVE 120
           CQQDG DA   REN RRLSQ      YL +IPQFVKIVEVGPRDGLQNEKHI+PT+VKVE
Sbjct: 62  CQQDGGDAVLSRENKRRLSQ------YLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVE 121

Query: 121 LIKMLVSSGLPIVEATSFVSPKWVPQLADAKDVMGGIKNVEGARFPVLTPNIKGFEAAVS 180
           LIKMLVSSGL IVEATSFVSPKWVPQLADA DVM GI+NVEGARFPVLTPNIKGFEAAV+
Sbjct: 122 LIKMLVSSGLRIVEATSFVSPKWVPQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVA 181

Query: 181 AGAKEVAIFASASESFSKSNINCSIEESLRRYHEVAVAARKHALPVR 226
           AGAKEVAIFASASESFSKSNINCSIEESLRRY EVAVAARK +LPVR
Sbjct: 182 AGAKEVAIFASASESFSKSNINCSIEESLRRYREVAVAARKQSLPVR 219

BLAST of MC05g1013 vs. ExPASy TrEMBL
Match: A0A6J1J8Q9 (Hydroxymethylglutaryl-CoA lyase OS=Cucurbita maxima OX=3661 GN=LOC111482306 PE=3 SV=1)

HSP 1 Score: 322 bits (825), Expect = 1.01e-106
Identity = 180/227 (79.30%), Postives = 191/227 (84.14%), Query Frame = 0

Query: 1   MQAARVSAKLTRRGLSCCHAYNPTMDTSGRFLVSTS-SHVGVNFFKRLPMNSTEREVDDC 60
           MQAA+VSAKLTRRGLS  H YNPTM  S RFL S+S SHVGV+    L +     EV +C
Sbjct: 2   MQAAKVSAKLTRRGLSWRHGYNPTMRISSRFLSSSSASHVGVSSTNGLGIQG---EVHNC 61

Query: 61  CQQDGRDAAPLRENSRRLSQSDILKWYLCNIPQFVKIVEVGPRDGLQNEKHIIPTSVKVE 120
           CQQDG DA   REN RRLSQ      YL +IPQFVKIVEVGPRDGLQNEKHI+PT+VKVE
Sbjct: 62  CQQDGGDAVLSRENKRRLSQ------YLRHIPQFVKIVEVGPRDGLQNEKHIVPTAVKVE 121

Query: 121 LIKMLVSSGLPIVEATSFVSPKWVPQLADAKDVMGGIKNVEGARFPVLTPNIKGFEAAVS 180
           LIKMLVSSGL IVEATSFVSPKWVPQLADA DVM GI+NVEGARFPVLTPNIKGFEAAV+
Sbjct: 122 LIKMLVSSGLRIVEATSFVSPKWVPQLADANDVMEGIRNVEGARFPVLTPNIKGFEAAVA 181

Query: 181 AGAKEVAIFASASESFSKSNINCSIEESLRRYHEVAVAARKHALPVR 226
           AGAKEVAIFASASESFSKSNINCSIEESLRRY EVAVAARK +LPVR
Sbjct: 182 AGAKEVAIFASASESFSKSNINCSIEESLRRYREVAVAARKQSLPVR 219

BLAST of MC05g1013 vs. ExPASy TrEMBL
Match: A0A0A0LHM6 (Hydroxymethylglutaryl-CoA lyase OS=Cucumis sativus OX=3659 GN=Csa_3G823050 PE=3 SV=1)

HSP 1 Score: 300 bits (767), Expect = 5.93e-98
Identity = 167/227 (73.57%), Postives = 186/227 (81.94%), Query Frame = 0

Query: 1   MQAARVSAKLTRRGLSCCHAYNPTMDTSGRFLVSTSS-HVGVNFFKRLPMNSTEREVDDC 60
           MQAA++SAK TR+  S  HAYN +M+T   FLVS S+  VGV+   R P    +RE  +C
Sbjct: 1   MQAAKLSAKFTRQSFSWRHAYNLSMETPTPFLVSPSATDVGVSSI-RTP--GIQREFYNC 60

Query: 61  CQQDGRDAAPLRENSRRLSQSDILKWYLCNIPQFVKIVEVGPRDGLQNEKHIIPTSVKVE 120
            QQDGRDA   REN   LSQ      YLC IP FVKIVEVGPRDGLQNEKHI+PT+VKV+
Sbjct: 61  SQQDGRDAVLSRENKGGLSQ------YLCRIPPFVKIVEVGPRDGLQNEKHIVPTAVKVD 120

Query: 121 LIKMLVSSGLPIVEATSFVSPKWVPQLADAKDVMGGIKNVEGARFPVLTPNIKGFEAAVS 180
           LIKMLVSSGLP+VEATSFVSPKWVPQLADAK+VM GI+NVEGARFPVLTPN+KGFEAAV+
Sbjct: 121 LIKMLVSSGLPVVEATSFVSPKWVPQLADAKEVMEGIRNVEGARFPVLTPNLKGFEAAVA 180

Query: 181 AGAKEVAIFASASESFSKSNINCSIEESLRRYHEVAVAARKHALPVR 226
           AGAKEVAIFASASESFSKSNINCSIEESL RY +VA AARKH+LPVR
Sbjct: 181 AGAKEVAIFASASESFSKSNINCSIEESLHRYRQVADAARKHSLPVR 218

BLAST of MC05g1013 vs. TAIR 10
Match: AT2G26800.1 (Aldolase superfamily protein )

HSP 1 Score: 221.5 bits (563), Expect = 7.0e-58
Identity = 111/137 (81.02%), Postives = 126/137 (91.97%), Query Frame = 0

Query: 90  IPQFVKIVEVGPRDGLQNEKHIIPTSVKVELIKMLVSSGLPIVEATSFVSPKWVPQLADA 149
           IP+FVKIVEVGPRDGLQNEK+I+PTSVKVELI+ LVSSGLP+VEATSFVSPKWVPQLADA
Sbjct: 129 IPKFVKIVEVGPRDGLQNEKNIVPTSVKVELIQRLVSSGLPVVEATSFVSPKWVPQLADA 188

Query: 150 KDVMGGIKNVEGARFPVLTPNIKGFEAAVSAGAKEVAIFASASESFSKSNINCSIEESLR 209
           KDVM  +  ++GAR PVLTPN+KGF+AAVSAGAKEVAIFASASESFS SNINC+IEESL 
Sbjct: 189 KDVMDAVNTLDGARLPVLTPNLKGFQAAVSAGAKEVAIFASASESFSLSNINCTIEESLL 248

Query: 210 RYHEVAVAARKHALPVR 227
           RY  VA AA++H++PVR
Sbjct: 249 RYRVVATAAKEHSVPVR 265

BLAST of MC05g1013 vs. TAIR 10
Match: AT2G26800.3 (Aldolase superfamily protein )

HSP 1 Score: 221.5 bits (563), Expect = 7.0e-58
Identity = 111/137 (81.02%), Postives = 126/137 (91.97%), Query Frame = 0

Query: 90  IPQFVKIVEVGPRDGLQNEKHIIPTSVKVELIKMLVSSGLPIVEATSFVSPKWVPQLADA 149
           IP+FVKIVEVGPRDGLQNEK+I+PTSVKVELI+ LVSSGLP+VEATSFVSPKWVPQLADA
Sbjct: 164 IPKFVKIVEVGPRDGLQNEKNIVPTSVKVELIQRLVSSGLPVVEATSFVSPKWVPQLADA 223

Query: 150 KDVMGGIKNVEGARFPVLTPNIKGFEAAVSAGAKEVAIFASASESFSKSNINCSIEESLR 209
           KDVM  +  ++GAR PVLTPN+KGF+AAVSAGAKEVAIFASASESFS SNINC+IEESL 
Sbjct: 224 KDVMDAVNTLDGARLPVLTPNLKGFQAAVSAGAKEVAIFASASESFSLSNINCTIEESLL 283

Query: 210 RYHEVAVAARKHALPVR 227
           RY  VA AA++H++PVR
Sbjct: 284 RYRVVATAAKEHSVPVR 300

BLAST of MC05g1013 vs. TAIR 10
Match: AT2G26800.2 (Aldolase superfamily protein )

HSP 1 Score: 221.5 bits (563), Expect = 7.0e-58
Identity = 111/137 (81.02%), Postives = 126/137 (91.97%), Query Frame = 0

Query: 90  IPQFVKIVEVGPRDGLQNEKHIIPTSVKVELIKMLVSSGLPIVEATSFVSPKWVPQLADA 149
           IP+FVKIVEVGPRDGLQNEK+I+PTSVKVELI+ LVSSGLP+VEATSFVSPKWVPQLADA
Sbjct: 164 IPKFVKIVEVGPRDGLQNEKNIVPTSVKVELIQRLVSSGLPVVEATSFVSPKWVPQLADA 223

Query: 150 KDVMGGIKNVEGARFPVLTPNIKGFEAAVSAGAKEVAIFASASESFSKSNINCSIEESLR 209
           KDVM  +  ++GAR PVLTPN+KGF+AAVSAGAKEVAIFASASESFS SNINC+IEESL 
Sbjct: 224 KDVMDAVNTLDGARLPVLTPNLKGFQAAVSAGAKEVAIFASASESFSLSNINCTIEESLL 283

Query: 210 RYHEVAVAARKHALPVR 227
           RY  VA AA++H++PVR
Sbjct: 284 RYRVVATAAKEHSVPVR 300

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
O810279.8e-5781.02Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Arabidopsis thaliana OX=3702 G... [more]
P359151.2e-4666.91Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Gallus gallus OX=9031 GN=HMGCL... [more]
Q294481.0e-4566.91Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Bos taurus OX=9913 GN=HMGCL PE... [more]
A8WG573.0e-4563.573-hydroxy-3-methylglutaryl-CoA lyase, cytoplasmic OS=Danio rerio OX=7955 GN=hmgc... [more]
P975191.9e-4464.23Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Rattus norvegicus OX=10116 GN=... [more]
Match NameE-valueIdentityDescription
XP_022153949.11.60e-14787.26hydroxymethylglutaryl-CoA lyase, mitochondrial-like [Momordica charantia] >XP_02... [more]
KAG6580930.16.36e-11080.18Hydroxymethylglutaryl-CoA lyase, mitochondrial, partial [Cucurbita argyrosperma ... [more]
XP_023526450.11.53e-10880.18hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X1 [Cucurbita pepo s... [more]
XP_022934490.16.16e-10879.30hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X1 [Cucurbita moscha... [more]
XP_022983796.11.58e-10779.30hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X3 [Cucurbita maxima... [more]
Match NameE-valueIdentityDescription
A0A6J1DIA67.73e-14887.26Hydroxymethylglutaryl-CoA lyase OS=Momordica charantia OX=3673 GN=LOC111021337 P... [more]
A0A6J1F7V02.98e-10879.30Hydroxymethylglutaryl-CoA lyase OS=Cucurbita moschata OX=3662 GN=LOC111441653 PE... [more]
A0A6J1J3E37.65e-10879.30Hydroxymethylglutaryl-CoA lyase OS=Cucurbita maxima OX=3661 GN=LOC111482306 PE=3... [more]
A0A6J1J8Q91.01e-10679.30Hydroxymethylglutaryl-CoA lyase OS=Cucurbita maxima OX=3661 GN=LOC111482306 PE=3... [more]
A0A0A0LHM65.93e-9873.57Hydroxymethylglutaryl-CoA lyase OS=Cucumis sativus OX=3659 GN=Csa_3G823050 PE=3 ... [more]
Match NameE-valueIdentityDescription
AT2G26800.17.0e-5881.02Aldolase superfamily protein [more]
AT2G26800.37.0e-5881.02Aldolase superfamily protein [more]
AT2G26800.27.0e-5881.02Aldolase superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000891Pyruvate carboxyltransferasePFAMPF00682HMGL-likecoord: 94..222
e-value: 7.7E-18
score: 65.0
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70Aldolase class Icoord: 90..226
e-value: 6.5E-47
score: 162.3
NoneNo IPR availablePANTHERPTHR42738:SF15HYDROXYMETHYLGLUTARYL-COA LYASEcoord: 53..226
NoneNo IPR availableSUPERFAMILY51569Aldolasecoord: 85..225
IPR043594HMG-CoA lyasePANTHERPTHR42738HYDROXYMETHYLGLUTARYL-COA LYASEcoord: 53..226

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC05g1013.1MC05g1013.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046951 ketone body biosynthetic process
biological_process GO:0006552 leucine catabolic process
biological_process GO:0006629 lipid metabolic process
molecular_function GO:0004419 hydroxymethylglutaryl-CoA lyase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0016833 oxo-acid-lyase activity