MC05g0988 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC05g0988
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC05: 11349009 .. 11349392 (+)
RNA-Seq ExpressionMC05g0988
SyntenyMC05g0988
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCTCGAAGAGTGGGAACTCCTCGATTGCAATGAAGACATGGATCAGAAGATAGCTTCCAGTTTAGATCGATCAATTGGCAGAGACGCATTCGATGAACACGAGATCGGTGTGCAAGATGATGAGGACGCCGTTTCACAAGTTTCCGGCGCCATGAAAAAGGACTCGCCTAGGTTTTCGATCGCGGCGGAATCAGATGTGGAGGAGGAGGTAGAAGGCAAGGAGGACGTGAATTCAGGAAAAATGAATACGGCGATGGAGAAGAGAGGTTTGGCGGTACAAAAATGGGGGAGAGCGGCCATGTGCTCGTTCGGAATTGCTGTGGCCGCTACAATTTGCAGTGTGTTATTGGGAAGCCATGGGCACCAAGGTGGGGGAAGC

mRNA sequence

ATGGGTCTCGAAGAGTGGGAACTCCTCGATTGCAATGAAGACATGGATCAGAAGATAGCTTCCAGTTTAGATCGATCAATTGGCAGAGACGCATTCGATGAACACGAGATCGGTGTGCAAGATGATGAGGACGCCGTTTCACAAGTTTCCGGCGCCATGAAAAAGGACTCGCCTAGGTTTTCGATCGCGGCGGAATCAGATGTGGAGGAGGAGGTAGAAGGCAAGGAGGACGTGAATTCAGGAAAAATGAATACGGCGATGGAGAAGAGAGGTTTGGCGGTACAAAAATGGGGGAGAGCGGCCATGTGCTCGTTCGGAATTGCTGTGGCCGCTACAATTTGCAGTGTGTTATTGGGAAGCCATGGGCACCAAGGTGGGGGAAGC

Coding sequence (CDS)

ATGGGTCTCGAAGAGTGGGAACTCCTCGATTGCAATGAAGACATGGATCAGAAGATAGCTTCCAGTTTAGATCGATCAATTGGCAGAGACGCATTCGATGAACACGAGATCGGTGTGCAAGATGATGAGGACGCCGTTTCACAAGTTTCCGGCGCCATGAAAAAGGACTCGCCTAGGTTTTCGATCGCGGCGGAATCAGATGTGGAGGAGGAGGTAGAAGGCAAGGAGGACGTGAATTCAGGAAAAATGAATACGGCGATGGAGAAGAGAGGTTTGGCGGTACAAAAATGGGGGAGAGCGGCCATGTGCTCGTTCGGAATTGCTGTGGCCGCTACAATTTGCAGTGTGTTATTGGGAAGCCATGGGCACCAAGGTGGGGGAAGC

Protein sequence

MGLEEWELLDCNEDMDQKIASSLDRSIGRDAFDEHEIGVQDDEDAVSQVSGAMKKDSPRFSIAAESDVEEEVEGKEDVNSGKMNTAMEKRGLAVQKWGRAAMCSFGIAVAATICSVLLGSHGHQGGGS
Homology
[Close]
BLAST of MC05g0988 vs. NCBI nr
Match: KGN59752.1 (hypothetical protein Csa_001232 [Cucumis sativus])

HSP 1 Score: 82.8 bits (203), Expect = 1.45e-17
Identity = 59/128 (46.09%), Postives = 72/128 (56.25%), Query Frame = 0 

Query: 1   MGLEEWELLDCNEDMDQKIASSLDRSIGRDAFDEHEIGVQDDEDAVSQVSGAMKKDSPRF 60
           MGL++WELLDC+ED DQ+ +              HE  V   +  +      M+      
Sbjct: 1   MGLDDWELLDCHEDHDQEKSRP------------HENVVISGQKLIGDTKNEME------ 60

Query: 61  SIAAESDVEEEVEGKEDVNS-GKMNTAMEKRGLAVQKWGRAAMCSFGIAVAATICSVLLG 120
              AE DVEEE    E V+S G M+ AMEKR    ++WGR  +CSFGIAVAATICSVLLG
Sbjct: 61  -AVAEFDVEEE----EKVDSRGGMDMAMEKR----KQWGRTVVCSFGIAVAATICSVLLG 101

Query: 121 SHGHQGGG 127
           SH H  GG
Sbjct: 121 SHSHHHGG 101

[Close]
BLAST of MC05g0988 vs. NCBI nr
Match: KAA0057194.1 (hypothetical protein E6C27_scaffold280G00230 [Cucumis melo var. makuwa] >TYK18767.1 hypothetical protein E5676_scaffold257G00740 [Cucumis melo var. makuwa])

HSP 1 Score: 72.4 bits (176), Expect = 1.61e-13
Identity = 54/127 (42.52%), Postives = 71/127 (55.91%), Query Frame = 0 

Query: 1   MGLEEWELLDCNEDMDQKIASSLDRSIGRDAFDEHEIGVQDDEDAVSQVSGAMKKDSPRF 60
           MGL++WELLDC+ED ++K                HE  V   +  ++     ++      
Sbjct: 1   MGLDDWELLDCHEDREEK--------------SRHENEVISGQKLIADTKKELE------ 60

Query: 61  SIAAESDVEEEVEGKEDVNSGKMNTAMEKRGLAVQKWGRAAMCSFGIAVAATICSVLLGS 120
            I AE +VEEE   KE+   G M+ A EK+    ++ GRA +CSFGIAVAATICSVLLGS
Sbjct: 61  -IVAEFEVEEEE--KENSRRG-MDMATEKK----KQRGRAVVCSFGIAVAATICSVLLGS 99

Query: 121 HGHQGGG 127
           H H  GG
Sbjct: 121 HSHHHGG 99

[Close]
BLAST of MC05g0988 vs. ExPASy TrEMBL
Match: A0A0A0LG95 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G842740 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 7.04e-18
Identity = 59/128 (46.09%), Postives = 72/128 (56.25%), Query Frame = 0 

Query: 1   MGLEEWELLDCNEDMDQKIASSLDRSIGRDAFDEHEIGVQDDEDAVSQVSGAMKKDSPRF 60
           MGL++WELLDC+ED DQ+ +              HE  V   +  +      M+      
Sbjct: 1   MGLDDWELLDCHEDHDQEKSRP------------HENVVISGQKLIGDTKNEME------ 60

Query: 61  SIAAESDVEEEVEGKEDVNS-GKMNTAMEKRGLAVQKWGRAAMCSFGIAVAATICSVLLG 120
              AE DVEEE    E V+S G M+ AMEKR    ++WGR  +CSFGIAVAATICSVLLG
Sbjct: 61  -AVAEFDVEEE----EKVDSRGGMDMAMEKR----KQWGRTVVCSFGIAVAATICSVLLG 101

Query: 121 SHGHQGGG 127
           SH H  GG
Sbjct: 121 SHSHHHGG 101

[Close]
BLAST of MC05g0988 vs. ExPASy TrEMBL
Match: A0A5D3D5E0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold257G00740 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 7.80e-14
Identity = 54/127 (42.52%), Postives = 71/127 (55.91%), Query Frame = 0 

Query: 1   MGLEEWELLDCNEDMDQKIASSLDRSIGRDAFDEHEIGVQDDEDAVSQVSGAMKKDSPRF 60
           MGL++WELLDC+ED ++K                HE  V   +  ++     ++      
Sbjct: 1   MGLDDWELLDCHEDREEK--------------SRHENEVISGQKLIADTKKELE------ 60

Query: 61  SIAAESDVEEEVEGKEDVNSGKMNTAMEKRGLAVQKWGRAAMCSFGIAVAATICSVLLGS 120
            I AE +VEEE   KE+   G M+ A EK+    ++ GRA +CSFGIAVAATICSVLLGS
Sbjct: 61  -IVAEFEVEEEE--KENSRRG-MDMATEKK----KQRGRAVVCSFGIAVAATICSVLLGS 99

Query: 121 HGHQGGG 127
           H H  GG
Sbjct: 121 HSHHHGG 99

The following BLAST results are available for this feature:
BLAST of MC05g0988 vs.
Match NameE-valueIdentityDescription
BLAST of MC05g0988 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN59752.11.45e-1746.09hypothetical protein Csa_001232 [Cucumis sativus][more]
KAA0057194.11.61e-1342.52hypothetical protein E6C27_scaffold280G00230 [Cucumis melo var. makuwa] >TYK1876... [more]
BLAST of MC05g0988 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LG957.04e-1846.09Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G842740 PE=4 SV=1[more]
A0A5D3D5E07.80e-1442.52Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MC05g0988 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..82

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC05g0988.1MC05g0988.1mRNA