MC05g0852 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC05g0852
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	40S ribosomal protein S23-like
Location	MC05: 7475803 .. 7476099 (+)
RNA-Seq Expression	MC05g0852
Synteny	MC05g0852

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTCTCACCTTGGAAATGAAGGGAAGAAGCCATTTGCCGGTTCTTCTCATGCAAAAGGCATTGTTTTGGAAAAGATTGGTATTGAGGCTAAGCAGACAAATGATGGTATTGAAACAAAATTGCCGCATTTGTGCCTAATGAGATATATGGTTGTCTTAACCAAATTGAGGAGAATGATGAAGTATTGATTGCCGGATTCGGTCGTGAAGGACATGCCGTCGGAGACATTCCTGATGTTGGATTCAAGGTTGTCTCTCCTTGCACTTTTTAAGGAAAAGAAGGAGAAGCTAAGGTCT

mRNA sequence

AAGTCTCACCTTGGAAATGAAGGGAAGAAGCCATTTGCCGGTTCTTCTCATGCAAAAGGCATTGTTTTGGAAAAGATTGGTATTGAGGCTAAGCAGACAAATGATGGTATTGAAAAAATTGCCGCATTTGTGCCTAATGAGATATATGGTTGTCTTAACCAAATTGAGGAGAATGATGAAGTATTGATTGCCGGATTCGGTCGTGAAGGACATGCCGTCGGAGACATTCCTGATGTTGGATTCAAGGTTGTCCTCCTTGCACTTTTTAAGGAAAAGAAGGAGAAGCTAAGGTCT

Coding sequence (CDS)

AAGTCTCACCTTGGAAATGAAGGGAAGAAGCCATTTGCCGGTTCTTCTCATGCAAAAGGCATTGTTTTGGAAAAGATTGGTATTGAGGCTAAGCAGACAAATGATGGTATTGAAAAAATTGCCGCATTTGTGCCTAATGAGATATATGGTTGTCTTAACCAAATTGAGGAGAATGATGAAGTATTGATTGCCGGATTCGGTCGTGAAGGACATGCCGTCGGAGACATTCCTGATGTTGGATTCAAGGTTGTCCTCCTTGCACTTTTTAAGGAAAAGAAGGAGAAGCTAAGGTCT

Protein sequence

KSHLGNEGKKPFAGSSHAKGIVLEKIGIEAKQTNDGIEKIAAFVPNEIYGCLNQIEENDEVLIAGFGREGHAVGDIPDVGFKVVLLALFKEKKEKLRS

Homology

[Close]

BLAST of MC05g0852 vs. ExPASy Swiss-Prot
Match: P49201 (40S ribosomal protein S23-2 OS=Arabidopsis thaliana OX=3702 GN=RPS23B PE=2 SV=2)

HSP 1 Score: 149.4 bits (376), Expect = 2.1e-35
Identity = 85/116 (73.28%), Postives = 88/116 (75.86%), Query Frame = 0


Query: 1   KSHLGNEGKKPFAGSSHAKGIVLEKIGIEAKQTNDGI------------EKIAAFVPNEI 60
           KSHLGNE KKPFAGSSHAKGIVLEKIGIEAKQ N  I            +KIAAFVPN+ 
Sbjct: 29  KSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPND- 88

Query: 61  YGCLNQIEENDEVLIAGFGREGHAVGDIPDVGFKVV------LLALFKEKKEKLRS 99
            GCLN IEENDEVLIAGFGR+GHAVGDIP V FKVV      LLALFKEKKEK RS
Sbjct: 89  -GCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 142

[Close]

BLAST of MC05g0852 vs. ExPASy Swiss-Prot
Match: Q9M5Z9 (40S ribosomal protein S23 OS=Euphorbia esula OX=3993 GN=RPS23 PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.1e-35
Identity = 85/116 (73.28%), Postives = 88/116 (75.86%), Query Frame = 0


Query: 1   KSHLGNEGKKPFAGSSHAKGIVLEKIGIEAKQTNDGI------------EKIAAFVPNEI 60
           KSHLGNE KKPFAGSSHAKGIVLEKIGIEAKQ N  I            +KIAAFVPN+ 
Sbjct: 29  KSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPND- 88

Query: 61  YGCLNQIEENDEVLIAGFGREGHAVGDIPDVGFKVV------LLALFKEKKEKLRS 99
            GCLN IEENDEVLIAGFGR+GHAVGDIP V FKVV      LLALFKEKKEK RS
Sbjct: 89  -GCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 142

[Close]

BLAST of MC05g0852 vs. ExPASy Swiss-Prot
Match: P46297 (40S ribosomal protein S23 OS=Fragaria ananassa OX=3747 GN=RPS23 PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.1e-35
Identity = 85/116 (73.28%), Postives = 88/116 (75.86%), Query Frame = 0


Query: 1   KSHLGNEGKKPFAGSSHAKGIVLEKIGIEAKQTNDGI------------EKIAAFVPNEI 60
           KSHLGNE KKPFAGSSHAKGIVLEKIGIEAKQ N  I            +KIAAFVPN+ 
Sbjct: 29  KSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPND- 88

Query: 61  YGCLNQIEENDEVLIAGFGREGHAVGDIPDVGFKVV------LLALFKEKKEKLRS 99
            GCLN IEENDEVLIAGFGR+GHAVGDIP V FKVV      LLALFKEKKEK RS
Sbjct: 89  -GCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 142

[Close]

BLAST of MC05g0852 vs. ExPASy Swiss-Prot
Match: Q9SF35 (40S ribosomal protein S23-1 OS=Arabidopsis thaliana OX=3702 GN=RPS23A PE=2 SV=2)

HSP 1 Score: 141.0 bits (354), Expect = 7.3e-33
Identity = 82/116 (70.69%), Postives = 86/116 (74.14%), Query Frame = 0


Query: 1   KSHLGNEGKKPFAGSSHAKGIVLEKIGIEAKQTNDGI------------EKIAAFVPNEI 60
           KS+ GNE KKPFA SSHAKGIVLEKIGIEAKQ N  I            +KIAAFVPN+ 
Sbjct: 29  KSNRGNEWKKPFACSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPND- 88

Query: 61  YGCLNQIEENDEVLIAGFGREGHAVGDIPDVGFKVV------LLALFKEKKEKLRS 99
            GCLN IEENDEVLIAGFGR+GHAVGDIP V FKVV      LLALFKEKKEK RS
Sbjct: 89  -GCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 142

[Close]

BLAST of MC05g0852 vs. ExPASy Swiss-Prot
Match: Q86FP7 (40S ribosomal protein S23 OS=Dermacentor variabilis OX=34621 GN=RpS23 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 8.4e-29
Identity = 72/117 (61.54%), Postives = 82/117 (70.09%), Query Frame = 0


Query: 1   KSHLGNEGK-KPFAGSSHAKGIVLEKIGIEAKQTNDGI------------EKIAAFVPNE 60
           K+HLG   K  PF G+SHAKGIVLEK+G+EAKQ N  I            +KI AFVP +
Sbjct: 29  KAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRD 88

Query: 61  IYGCLNQIEENDEVLIAGFGREGHAVGDIPDVGFKVV------LLALFKEKKEKLRS 99
             GCLN IEENDEVL+AGFGR+GHAVGDIP V FKVV      LLAL+KEKKE+ RS
Sbjct: 89  --GCLNYIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 143

[Close]

BLAST of MC05g0852 vs. NCBI nr
Match: XP_022145774.1 (40S ribosomal protein S23-like [Momordica charantia])

HSP 1 Score: 161 bits (408), Expect = 9.42e-49
Identity = 89/116 (76.72%), Postives = 91/116 (78.45%), Query Frame = 0


Query: 1   KSHLGNEGKKPFAGSSHAKGIVLEKIGIEAKQTNDGI------------EKIAAFVPNEI 60
           KSHLGNE KKPFAGSSHAKGIVLEKIGIEAKQ N  I            +KIAAFVPNEI
Sbjct: 29  KSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNEI 88

Query: 61  YGCLNQIEENDEVLIAGFGREGHAVGDIPDVGFKVV------LLALFKEKKEKLRS 98
           YGCLNQIEENDEVLIAGFGR+GHAVGDIP V FKVV      LLALFKEKKEK RS
Sbjct: 89  YGCLNQIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 144

[Close]

BLAST of MC05g0852 vs. NCBI nr
Match: KCW49709.1 (hypothetical protein EUGRSUZ_K03211 [Eucalyptus grandis])

HSP 1 Score: 152 bits (383), Expect = 4.28e-45
Identity = 85/107 (79.44%), Postives = 87/107 (81.31%), Query Frame = 0


Query: 1   KSHLGNEGKKPFAGSSHAKGIVLEKIGIEAKQTNDGIEK---IAAFVPNEIYGCLNQIEE 60
           KSHLGNE KKPFAGSSHAKGIVLEKIGIEAKQ N  I K   IAAFVPN+  GCLN IEE
Sbjct: 29  KSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARIAAFVPND--GCLNYIEE 88

Query: 61  NDEVLIAGFGREGHAVGDIPDVGFKVV------LLALFKEKKEKLRS 98
           NDEVLIAGFGR+GHAVGDIP V FKVV      LLALFKEKKEK RS
Sbjct: 89  NDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 133

[Close]

BLAST of MC05g0852 vs. NCBI nr
Match: ACF83276.1 (unknown [Zea mays] >KAG2618720.1 hypothetical protein PVAP13_3NG079762 [Panicum virgatum] >OEL15056.1 40S ribosomal protein S23 [Dichanthelium oligosanthes] >CAB3461235.1 unnamed protein product [Digitaria exilis] >ACL53616.1 unknown [Zea mays])

HSP 1 Score: 149 bits (375), Expect = 7.77e-44
Identity = 85/116 (73.28%), Postives = 88/116 (75.86%), Query Frame = 0


Query: 1   KSHLGNEGKKPFAGSSHAKGIVLEKIGIEAKQTNDGI------------EKIAAFVPNEI 60
           KSHLGNE KKPFAGSSHAKGIVLEKIGIEAKQ N  I            +KIAAFVPN+ 
Sbjct: 23  KSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLVKNGKKIAAFVPND- 82

Query: 61  YGCLNQIEENDEVLIAGFGREGHAVGDIPDVGFKVV------LLALFKEKKEKLRS 98
            GCLN IEENDEVLIAGFGR+GHAVGDIP V FKVV      LLALFKEKKEK RS
Sbjct: 83  -GCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 136

[Close]

BLAST of MC05g0852 vs. NCBI nr
Match: GER49127.1 (40S ribosomal protein S23 [Striga asiatica])

HSP 1 Score: 149 bits (375), Expect = 7.77e-44
Identity = 85/116 (73.28%), Postives = 88/116 (75.86%), Query Frame = 0


Query: 1   KSHLGNEGKKPFAGSSHAKGIVLEKIGIEAKQTNDGI------------EKIAAFVPNEI 60
           KSHLGNE KKPFAGSSHAKGIVLEKIGIEAKQ N  I            +KIAAFVPN+ 
Sbjct: 23  KSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPND- 82

Query: 61  YGCLNQIEENDEVLIAGFGREGHAVGDIPDVGFKVV------LLALFKEKKEKLRS 98
            GCLN IEENDEVLIAGFGR+GHAVGDIP V FKVV      LLALFKEKKEK RS
Sbjct: 83  -GCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 136

[Close]

BLAST of MC05g0852 vs. NCBI nr
Match: KAF7805552.1 (40S ribosomal protein S23 [Senna tora])

HSP 1 Score: 149 bits (375), Expect = 7.77e-44
Identity = 85/116 (73.28%), Postives = 88/116 (75.86%), Query Frame = 0


Query: 1   KSHLGNEGKKPFAGSSHAKGIVLEKIGIEAKQTNDGI------------EKIAAFVPNEI 60
           KSHLGNE KKPFAGSSHAKGIVLEKIGIEAKQ N  I            +KIAAFVPN+ 
Sbjct: 23  KSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPND- 82

Query: 61  YGCLNQIEENDEVLIAGFGREGHAVGDIPDVGFKVV------LLALFKEKKEKLRS 98
            GCLN IEENDEVLIAGFGR+GHAVGDIP V FKVV      LLALFKEKKEK RS
Sbjct: 83  -GCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 136

[Close]

BLAST of MC05g0852 vs. ExPASy TrEMBL
Match: A0A6J1CW97 (40S ribosomal protein S23-like OS=Momordica charantia OX=3673 GN=LOC111015149 PE=3 SV=1)

HSP 1 Score: 161 bits (408), Expect = 4.56e-49
Identity = 89/116 (76.72%), Postives = 91/116 (78.45%), Query Frame = 0


Query: 1   KSHLGNEGKKPFAGSSHAKGIVLEKIGIEAKQTNDGI------------EKIAAFVPNEI 60
           KSHLGNE KKPFAGSSHAKGIVLEKIGIEAKQ N  I            +KIAAFVPNEI
Sbjct: 29  KSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNEI 88

Query: 61  YGCLNQIEENDEVLIAGFGREGHAVGDIPDVGFKVV------LLALFKEKKEKLRS 98
           YGCLNQIEENDEVLIAGFGR+GHAVGDIP V FKVV      LLALFKEKKEK RS
Sbjct: 89  YGCLNQIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 144

[Close]

BLAST of MC05g0852 vs. ExPASy TrEMBL
Match: A0A059A7J6 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K03211 PE=3 SV=1)

HSP 1 Score: 152 bits (383), Expect = 2.07e-45
Identity = 85/107 (79.44%), Postives = 87/107 (81.31%), Query Frame = 0


Query: 1   KSHLGNEGKKPFAGSSHAKGIVLEKIGIEAKQTNDGIEK---IAAFVPNEIYGCLNQIEE 60
           KSHLGNE KKPFAGSSHAKGIVLEKIGIEAKQ N  I K   IAAFVPN+  GCLN IEE
Sbjct: 29  KSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARIAAFVPND--GCLNYIEE 88

Query: 61  NDEVLIAGFGREGHAVGDIPDVGFKVV------LLALFKEKKEKLRS 98
           NDEVLIAGFGR+GHAVGDIP V FKVV      LLALFKEKKEK RS
Sbjct: 89  NDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 133

[Close]

BLAST of MC05g0852 vs. ExPASy TrEMBL
Match: A0A6A6L6X2 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_027795 PE=3 SV=1)

HSP 1 Score: 149 bits (375), Expect = 3.76e-44
Identity = 85/116 (73.28%), Postives = 88/116 (75.86%), Query Frame = 0


Query: 1   KSHLGNEGKKPFAGSSHAKGIVLEKIGIEAKQTNDGI------------EKIAAFVPNEI 60
           KSHLGNE KKPFAGSSHAKGIVLEKIGIEAKQ N  I            +KIAAFVPN+ 
Sbjct: 23  KSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPND- 82

Query: 61  YGCLNQIEENDEVLIAGFGREGHAVGDIPDVGFKVV------LLALFKEKKEKLRS 98
            GCLN IEENDEVLIAGFGR+GHAVGDIP V FKVV      LLALFKEKKEK RS
Sbjct: 83  -GCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 136

[Close]

BLAST of MC05g0852 vs. ExPASy TrEMBL
Match: A0A151TV24 (40S ribosomal protein S23 OS=Cajanus cajan OX=3821 GN=KK1_010082 PE=3 SV=1)

HSP 1 Score: 149 bits (375), Expect = 3.76e-44
Identity = 85/116 (73.28%), Postives = 88/116 (75.86%), Query Frame = 0


Query: 1   KSHLGNEGKKPFAGSSHAKGIVLEKIGIEAKQTNDGI------------EKIAAFVPNEI 60
           KSHLGNE KKPFAGSSHAKGIVLEKIGIEAKQ N  I            +KIAAFVPN+ 
Sbjct: 23  KSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPND- 82

Query: 61  YGCLNQIEENDEVLIAGFGREGHAVGDIPDVGFKVV------LLALFKEKKEKLRS 98
            GCLN IEENDEVLIAGFGR+GHAVGDIP V FKVV      LLALFKEKKEK RS
Sbjct: 83  -GCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 136

[Close]

BLAST of MC05g0852 vs. ExPASy TrEMBL
Match: A0A072VW19 (40S ribosomal protein S23-1 OS=Medicago truncatula OX=3880 GN=25484043 PE=3 SV=1)

HSP 1 Score: 149 bits (375), Expect = 3.76e-44
Identity = 85/116 (73.28%), Postives = 88/116 (75.86%), Query Frame = 0


Query: 1   KSHLGNEGKKPFAGSSHAKGIVLEKIGIEAKQTNDGI------------EKIAAFVPNEI 60
           KSHLGNE KKPFAGSSHAKGIVLEKIGIEAKQ N  I            +KIAAFVPN+ 
Sbjct: 23  KSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPND- 82

Query: 61  YGCLNQIEENDEVLIAGFGREGHAVGDIPDVGFKVV------LLALFKEKKEKLRS 98
            GCLN IEENDEVLIAGFGR+GHAVGDIP V FKVV      LLALFKEKKEK RS
Sbjct: 83  -GCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 136

[Close]

BLAST of MC05g0852 vs. TAIR 10
Match: AT5G02960.1 (Ribosomal protein S12/S23 family protein )

HSP 1 Score: 149.4 bits (376), Expect = 1.5e-36
Identity = 85/116 (73.28%), Postives = 88/116 (75.86%), Query Frame = 0


Query: 1   KSHLGNEGKKPFAGSSHAKGIVLEKIGIEAKQTNDGI------------EKIAAFVPNEI 60
           KSHLGNE KKPFAGSSHAKGIVLEKIGIEAKQ N  I            +KIAAFVPN+ 
Sbjct: 29  KSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPND- 88

Query: 61  YGCLNQIEENDEVLIAGFGREGHAVGDIPDVGFKVV------LLALFKEKKEKLRS 99
            GCLN IEENDEVLIAGFGR+GHAVGDIP V FKVV      LLALFKEKKEK RS
Sbjct: 89  -GCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 142

[Close]

BLAST of MC05g0852 vs. TAIR 10
Match: AT3G09680.1 (Ribosomal protein S12/S23 family protein )

HSP 1 Score: 141.0 bits (354), Expect = 5.2e-34
Identity = 82/116 (70.69%), Postives = 86/116 (74.14%), Query Frame = 0


Query: 1   KSHLGNEGKKPFAGSSHAKGIVLEKIGIEAKQTNDGI------------EKIAAFVPNEI 60
           KS+ GNE KKPFA SSHAKGIVLEKIGIEAKQ N  I            +KIAAFVPN+ 
Sbjct: 29  KSNRGNEWKKPFACSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPND- 88

Query: 61  YGCLNQIEENDEVLIAGFGREGHAVGDIPDVGFKVV------LLALFKEKKEKLRS 99
            GCLN IEENDEVLIAGFGR+GHAVGDIP V FKVV      LLALFKEKKEK RS
Sbjct: 89  -GCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 142

The following BLAST results are available for this feature:

BLAST of MC05g0852 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49201	2.1e-35	73.28	40S ribosomal protein S23-2 OS=Arabidopsis thaliana OX=3702 GN=RPS23B PE=2 SV=2	[more]
Q9M5Z9	2.1e-35	73.28	40S ribosomal protein S23 OS=Euphorbia esula OX=3993 GN=RPS23 PE=2 SV=1	[more]
P46297	2.1e-35	73.28	40S ribosomal protein S23 OS=Fragaria ananassa OX=3747 GN=RPS23 PE=2 SV=1	[more]
Q9SF35	7.3e-33	70.69	40S ribosomal protein S23-1 OS=Arabidopsis thaliana OX=3702 GN=RPS23A PE=2 SV=2	[more]
Q86FP7	8.4e-29	61.54	40S ribosomal protein S23 OS=Dermacentor variabilis OX=34621 GN=RpS23 PE=2 SV=1	[more]

BLAST of MC05g0852 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145774.1	9.42e-49	76.72	40S ribosomal protein S23-like [Momordica charantia]	[more]
KCW49709.1	4.28e-45	79.44	hypothetical protein EUGRSUZ_K03211 [Eucalyptus grandis]	[more]
ACF83276.1	7.77e-44	73.28	unknown [Zea mays] >KAG2618720.1 hypothetical protein PVAP13_3NG079762 [Panicum ...	[more]
GER49127.1	7.77e-44	73.28	40S ribosomal protein S23 [Striga asiatica]	[more]
KAF7805552.1	7.77e-44	73.28	40S ribosomal protein S23 [Senna tora]	[more]

BLAST of MC05g0852 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CW97	4.56e-49	76.72	40S ribosomal protein S23-like OS=Momordica charantia OX=3673 GN=LOC111015149 PE...	[more]
A0A059A7J6	2.07e-45	79.44	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K03211 PE=3 SV...	[more]
A0A6A6L6X2	3.76e-44	73.28	Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_027795 PE=3 SV=1	[more]
A0A151TV24	3.76e-44	73.28	40S ribosomal protein S23 OS=Cajanus cajan OX=3821 GN=KK1_010082 PE=3 SV=1	[more]
A0A072VW19	3.76e-44	73.28	40S ribosomal protein S23-1 OS=Medicago truncatula OX=3880 GN=25484043 PE=3 SV=1	[more]

BLAST of MC05g0852 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02960.1	1.5e-36	73.28	Ribosomal protein S12/S23 family protein	[more]
AT3G09680.1	5.2e-34	70.69	Ribosomal protein S12/S23 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006032	Ribosomal protein S12/S23	PFAM	PF00164	Ribosom_S12_S23	coord: 8..95 e-value: 5.8E-21 score: 74.3
IPR006032	Ribosomal protein S12/S23	PANTHER	PTHR11652	30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER	coord: 1..98
None	No IPR available	GENE3D	2.40.50.140		coord: 1..98 e-value: 1.8E-16 score: 61.6
None	No IPR available	PANTHER	PTHR11652:SF59	BNACNNG03140D PROTEIN	coord: 1..98
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 9..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC05g0852.1	MC05g0852.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome