MC05g0019 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC05g0019
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description60S acidic ribosomal protein P1-like
LocationMC05: 158633 .. 160450 (+)
RNA-Seq ExpressionMC05g0019
SyntenyMC05g0019
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGGGTTTGGAATGATAGCATCTGGATATGGGGTGGAACAGAATCTGGCTGATTTGAAGATGCATTGAAGCAATTTTATCTCCACCATCAATAGCAGCCATTGAATATTTTCAACTCTTTTAAATTCATTCACCCCCATTAAACATATATATATATATATATATATATATATGAGATTGGAGTTAGGGCCATTTTCAGTTTTCAGTTCGGTATCTATTTTGTTCAAGTTTGACTTTGACCACAGTTTTTGGTTCGCTCGTTCTTTATTTGACAATTTCAACACCACTGACTGTCCACTGCCATTCTACGGTAAACGACGTCGTCCTTTAATTTTGGGCCGTATGCTCACTGTGGGCCTGTCCAAGCAGGGCTCCACAAATAACGCAAGCCCATATCCGATGCTTCAATAAAAACGCAACCTCGACAACATCCCAAACCCTAGAACCGCTTCCGTGTTGCGCAGCGAAGAACAGACTGTCTACGGCCTCCGCCATCGCCCATTTCTTCTGGTAATTTCTCTCTCTCAATCTCCAAGTTTTATTCCATATTTTTGTTCACTTCAACTGTTGTTCCAAAAATTAGTTTGTTGTAATGCATATAATTCTTAACGTTTCGTGGTTTCGACTGTTTTTCTTTGTTTCTGCGTCTTCTTCCGTAATTTGGCTCTCCTTTGAATGTGCAGTGTAAGATGTCGACCGCAGAAATCGCTTGCTCCTACGCTGCTATGATCCTCTACGACGATGGCATCTCGATTACAGTATGATTCTCTTCAATTCTGGCATCGTCCTTCAGTATTTCATTCCTTTCTTAGTTATTACTTTCTGGATCTCGTTTACCAGTTTCAAAGTAATTAGCGGGGATGTTACCATGTATTATTCAAAGTGGTTGGTGTGGATGTCAGGAAAGGAGTATTAATTTTTGTGTGACTGCCATTCTAAATTGATAAAATAAGAAACATGGAGTATTATTCAAACTATCGTTCTCTTTTTTGTTACAAGTCTTGTTTTCTAGATCTTGTTCTTCTGCCATGATTCCTTTTCTAGCCTGTTTATATCATTGGTTCATATTTGCGATCATGGTTTTATTCTTAATTTTCTTAATAGCGATTGTTATCATGCGGTCGTATCTGTCTAGTTCACATAAATTGTATGGAAATAAGATTTCAAAATGTGTGTTTTCATCAGGCAGAGAAGATTGCCGCCCTTGTAAAAGCAGCTAATGTGAGTGGTGTGGATTCGTACTGGTATAGCCTTTTCGCTAAGCTGGCTGAGAAGCGCAACATTGGGGATTTGATTATGAATGTTGGGGCTGGTGGAGGTGCGGCAGTCGCTGCTGCTGTCCCAGCCGGTGGGGCTGCTGGCGGTGCTGCTGCTGCAGCCGCTCCTCCACCCGAAGAGAAAAAGGTAAGCGGATACCCATTTGGTTTCCAAGAAGGAAATTGTTGCATATGTTATCATGGATAAAGCTTGGTTTTGTGGTGGTAGTACATCATTGTGACATGGGATTGTTTTGTTATTTGCAGGAAGAGCCAAAGGAAGAGAGTGACGATGACATGGGATTCAGTTTGTTTGACTAGGTCAATGTGGCTTTGCAATTTACATATTTTGATCTAGGTTAATTATCCTCTTAAATGCCGGAGGGCTCCTTTGTTATTTCACATATATGTAATTTTGGACAAATTTGTGACAAGTTTTGATTTGAATGTTATCTGAATGCATCTTTTCTTTTGAGATATATTTATGTTGCTTGCCCTCGCTAGGTGCAATACGTTTTAGAAGATTGTTGCTTTTCTTTATATGCCTTTTATCTATTATGCAT

mRNA sequence

GTGGGTTTGGAATGATAGCATCTGGATATGGGGTGGAACAGAATCTGGCTGATTTGAAGATGCATTGAAGCAATTTTATCTCCACCATCAATAGCAGCCATTGAATATTTTCAACTCTTTTAAATTCATTCACCCCCATTAAACATATATATATATATATATATATATATATGAGATTGGAGTTAGGGCCATTTTCAGTTTTCAGTTCGGTATCTATTTTGTTCAAGTTTGACTTTGACCACAGTTTTTGGTTCGCTCGTTCTTTATTTGACAATTTCAACACCACTGACTGTCCACTGCCATTCTACGGTAAACGACGTCGTCCTTTAATTTTGGGCCGTATGCTCACTGTGGGCCTGTCCAAGCAGGGCTCCACAAATAACGCAAGCCCATATCCGATGCTTCAATAAAAACGCAACCTCGACAACATCCCAAACCCTAGAACCGCTTCCGTGTTGCGCAGCGAAGAACAGACTGTCTACGGCCTCCGCCATCGCCCATTTCTTCTGTGTAAGATGTCGACCGCAGAAATCGCTTGCTCCTACGCTGCTATGATCCTCTACGACGATGGCATCTCGATTACAGCAGAGAAGATTGCCGCCCTTGTAAAAGCAGCTAATGTGAGTGGTGTGGATTCGTACTGGTATAGCCTTTTCGCTAAGCTGGCTGAGAAGCGCAACATTGGGGATTTGATTATGAATGTTGGGGCTGGTGGAGGTGCGGCAGTCGCTGCTGCTGTCCCAGCCGGTGGGGCTGCTGGCGGTGCTGCTGCTGCAGCCGCTCCTCCACCCGAAGAGAAAAAGGAAGAGCCAAAGGAAGAGAGTGACGATGACATGGGATTCAGTTTGTTTGACTAGGTCAATGTGGCTTTGCAATTTACATATTTTGATCTAGGTTAATTATCCTCTTAAATGCCGGAGGGCTCCTTTGTTATTTCACATATATGTAATTTTGGACAAATTTGTGACAAGTTTTGATTTGAATGTTATCTGAATGCATCTTTTCTTTTGAGATATATTTATGTTGCTTGCCCTCGCTAGGTGCAATACGTTTTAGAAGATTGTTGCTTTTCTTTATATGCCTTTTATCTATTATGCAT

Coding sequence (CDS)

ATGTCGACCGCAGAAATCGCTTGCTCCTACGCTGCTATGATCCTCTACGACGATGGCATCTCGATTACAGCAGAGAAGATTGCCGCCCTTGTAAAAGCAGCTAATGTGAGTGGTGTGGATTCGTACTGGTATAGCCTTTTCGCTAAGCTGGCTGAGAAGCGCAACATTGGGGATTTGATTATGAATGTTGGGGCTGGTGGAGGTGCGGCAGTCGCTGCTGCTGTCCCAGCCGGTGGGGCTGCTGGCGGTGCTGCTGCTGCAGCCGCTCCTCCACCCGAAGAGAAAAAGGAAGAGCCAAAGGAAGAGAGTGACGATGACATGGGATTCAGTTTGTTTGACTAG

Protein sequence

MSTAEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDLIMNVGAGGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD
Homology
[Close]
BLAST of MC05g0019 vs. ExPASy Swiss-Prot
Match: P52855 (60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 7.1e-32
Identity = 83/114 (72.81%), Postives = 96/114 (84.21%), Query Frame = 0 

Query: 1   MSTAEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDLI 60
           M++ E+AC YAA+IL DDGI+ITAEKIA +VKAAN+  V+SYW +LFAKL EKRN+ DLI
Sbjct: 1   MASGELACRYAALILSDDGIAITAEKIATIVKAANIK-VESYWPALFAKLLEKRNVEDLI 60

Query: 61  MNVGAGGGAA-VAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           ++VG+GGGAA VAAA P    AGGAAAAAAP  EEKKEE KEESDDDMGFSLFD
Sbjct: 61  LSVGSGGGAAPVAAAAP----AGGAAAAAAPAVEEKKEEAKEESDDDMGFSLFD 109

[Close]
BLAST of MC05g0019 vs. ExPASy Swiss-Prot
Match: Q8LEQ0 (60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 SV=2)

HSP 1 Score: 125.9 bits (315), Expect = 2.8e-28
Identity = 80/116 (68.97%), Postives = 92/116 (79.31%), Query Frame = 0 

Query: 1   MST-AEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDL 60
           MST  E+ACSYA MIL D+GI+ITA+KIA LVKAA V+ ++SYW  LFAK+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVT-IESYWPMLFAKMAEKRNVTDL 60

Query: 61  IMNVGA--GGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           IMNVGA  GGGA VAAA PA G  GGAAAAA    E+KK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGAPVAAAAPAAG--GGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

[Close]
BLAST of MC05g0019 vs. ExPASy Swiss-Prot
Match: Q8LCW9 (60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 SV=2)

HSP 1 Score: 124.8 bits (312), Expect = 6.3e-28
Identity = 80/116 (68.97%), Postives = 91/116 (78.45%), Query Frame = 0 

Query: 1   MST-AEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDL 60
           MST  E+ACSYA MIL D+GI+ITA+KIA LVKAA VS ++SYW  LFAK+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVS-IESYWPMLFAKMAEKRNVTDL 60

Query: 61  IMNVGA--GGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           IMNVGA  GGGA VAAA P   AAGG AAAA    E+KK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGAPVAAAAP---AAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112

[Close]
BLAST of MC05g0019 vs. ExPASy Swiss-Prot
Match: O23095 (60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 SV=2)

HSP 1 Score: 124.8 bits (312), Expect = 6.3e-28
Identity = 76/114 (66.67%), Postives = 87/114 (76.32%), Query Frame = 0 

Query: 1   MST-AEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDL 60
           MST  E+ACSYA MIL D+GI+IT++KIA LVKAA V  ++SYW  LFAK+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITSDKIATLVKAAGVE-IESYWPMLFAKMAEKRNVTDL 60

Query: 61  IMNVGAGGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           IMNVGAGGG   A    A  AA G AAAAAP  EEKK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGGAPVSAAAPAAAGGAAAAAPAKEEKKDEPAEESDGDLGFGLFD 113

[Close]
BLAST of MC05g0019 vs. ExPASy Swiss-Prot
Match: Q9HGV0 (60S acidic ribosomal protein P1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=AFUA_1G06830 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.0e-25
Identity = 71/113 (62.83%), Postives = 83/113 (73.45%), Query Frame = 0 

Query: 1   MSTAEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDLI 60
           MSTAE+ACSYAA+IL DDG+ ITA+KI  L+ AA V+ V+  W SLFAK  E ++I DL+
Sbjct: 1   MSTAELACSYAALILADDGVEITADKIQTLLGAAKVADVEPIWTSLFAKALEGKDIKDLL 60

Query: 61  MNVGAGGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
            NVG+GG AA AA    G AAG AA A A   EEKKEE KEESD+DMGF LFD
Sbjct: 61  TNVGSGGAAAPAAV--GGAAAGAAAPAEAAAAEEKKEEEKEESDEDMGFGLFD 111

[Close]
BLAST of MC05g0019 vs. NCBI nr
Match: XP_022144008.1 (60S acidic ribosomal protein P1-like [Momordica charantia])

HSP 1 Score: 205 bits (522), Expect = 2.72e-66
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MSTAEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDLI 60
           MSTAEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDLI
Sbjct: 1   MSTAEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDLI 60

Query: 61  MNVGAGGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113
           MNVGAGGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  MNVGAGGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]
BLAST of MC05g0019 vs. NCBI nr
Match: XP_008437779.1 (PREDICTED: 60S acidic ribosomal protein P1-like [Cucumis melo] >KAA0048820.1 60S acidic ribosomal protein P1-like [Cucumis melo var. makuwa] >TYK20773.1 60S acidic ribosomal protein P1-like [Cucumis melo var. makuwa])

HSP 1 Score: 187 bits (476), Expect = 2.82e-59
Identity = 103/113 (91.15%), Postives = 106/113 (93.81%), Query Frame = 0 

Query: 1   MSTAEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDLI 60
           MST EIACSYAA+ILYDD I ITAEKIA LVKAANVS V+SYWYSLFAKLAEKRNIGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAANVSDVESYWYSLFAKLAEKRNIGDLI 60

Query: 61  MNVGAGGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113
           +NVGAGGGAAVAAAVPAGGAA G AAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  LNVGAGGGAAVAAAVPAGGAAAGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]
BLAST of MC05g0019 vs. NCBI nr
Match: XP_004133766.1 (60S acidic ribosomal protein P1 [Cucumis sativus] >KGN56349.1 hypothetical protein Csa_009966 [Cucumis sativus])

HSP 1 Score: 182 bits (463), Expect = 2.71e-57
Identity = 100/113 (88.50%), Postives = 104/113 (92.04%), Query Frame = 0 

Query: 1   MSTAEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDLI 60
           MST EIACSYAA+ILYDD I ITAEKIA LVKAA VS V+SYWY LFAKLAEKR+IGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLI 60

Query: 61  MNVGAGGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113
           +NVGAGGGAAVAAA PAGGAAGG AAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  LNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]
BLAST of MC05g0019 vs. NCBI nr
Match: XP_038883955.1 (60S acidic ribosomal protein P1-like [Benincasa hispida])

HSP 1 Score: 182 bits (461), Expect = 5.47e-57
Identity = 99/113 (87.61%), Postives = 104/113 (92.04%), Query Frame = 0 

Query: 1   MSTAEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDLI 60
           MST EIACSYAA+ILYDD I ITAEKIA +VKAANV  V+SYW+ LFAKLAEKRNIGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATIVKAANVPDVESYWFGLFAKLAEKRNIGDLI 60

Query: 61  MNVGAGGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113
           +NVGAGGGAAVAAAVPA G AGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  LNVGAGGGAAVAAAVPASGVAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]
BLAST of MC05g0019 vs. NCBI nr
Match: XP_022974253.1 (60S acidic ribosomal protein P1-like [Cucurbita maxima] >XP_022975257.1 60S acidic ribosomal protein P1-like [Cucurbita maxima] >XP_023538866.1 60S acidic ribosomal protein P1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 172 bits (437), Expect = 2.34e-53
Identity = 98/113 (86.73%), Postives = 103/113 (91.15%), Query Frame = 0 

Query: 1   MSTAEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDLI 60
           MS  EIACSYAA+ILYDD I +TAEK+A LVKAA V   +SYW+SLFAKLAEKRNIGDLI
Sbjct: 1   MSVGEIACSYAALILYDDNIPVTAEKLATLVKAAGVDA-ESYWFSLFAKLAEKRNIGDLI 60

Query: 61  MNVGAGGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113
           MNVGAGGGAAVAAAVPAGGA GGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  MNVGAGGGAAVAAAVPAGGA-GGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 111

[Close]
BLAST of MC05g0019 vs. ExPASy TrEMBL
Match: A0A6J1CS45 (60S acidic ribosomal protein P1-like OS=Momordica charantia OX=3673 GN=LOC111013791 PE=3 SV=1)

HSP 1 Score: 205 bits (522), Expect = 1.32e-66
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MSTAEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDLI 60
           MSTAEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDLI
Sbjct: 1   MSTAEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDLI 60

Query: 61  MNVGAGGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113
           MNVGAGGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  MNVGAGGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]
BLAST of MC05g0019 vs. ExPASy TrEMBL
Match: A0A5D3DB57 (60S acidic ribosomal protein P1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00330 PE=3 SV=1)

HSP 1 Score: 187 bits (476), Expect = 1.37e-59
Identity = 103/113 (91.15%), Postives = 106/113 (93.81%), Query Frame = 0 

Query: 1   MSTAEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDLI 60
           MST EIACSYAA+ILYDD I ITAEKIA LVKAANVS V+SYWYSLFAKLAEKRNIGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAANVSDVESYWYSLFAKLAEKRNIGDLI 60

Query: 61  MNVGAGGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113
           +NVGAGGGAAVAAAVPAGGAA G AAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  LNVGAGGGAAVAAAVPAGGAAAGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]
BLAST of MC05g0019 vs. ExPASy TrEMBL
Match: A0A1S3AUG9 (60S acidic ribosomal protein P1-like OS=Cucumis melo OX=3656 GN=LOC103483111 PE=3 SV=1)

HSP 1 Score: 187 bits (476), Expect = 1.37e-59
Identity = 103/113 (91.15%), Postives = 106/113 (93.81%), Query Frame = 0 

Query: 1   MSTAEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDLI 60
           MST EIACSYAA+ILYDD I ITAEKIA LVKAANVS V+SYWYSLFAKLAEKRNIGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAANVSDVESYWYSLFAKLAEKRNIGDLI 60

Query: 61  MNVGAGGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113
           +NVGAGGGAAVAAAVPAGGAA G AAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  LNVGAGGGAAVAAAVPAGGAAAGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]
BLAST of MC05g0019 vs. ExPASy TrEMBL
Match: A0A0A0L5M7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116860 PE=3 SV=1)

HSP 1 Score: 182 bits (463), Expect = 1.31e-57
Identity = 100/113 (88.50%), Postives = 104/113 (92.04%), Query Frame = 0 

Query: 1   MSTAEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDLI 60
           MST EIACSYAA+ILYDD I ITAEKIA LVKAA VS V+SYWY LFAKLAEKR+IGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLI 60

Query: 61  MNVGAGGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113
           +NVGAGGGAAVAAA PAGGAAGG AAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  LNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]
BLAST of MC05g0019 vs. ExPASy TrEMBL
Match: A0A6J1ICK4 (60S acidic ribosomal protein P1-like OS=Cucurbita maxima OX=3661 GN=LOC111474378 PE=3 SV=1)

HSP 1 Score: 172 bits (437), Expect = 1.13e-53
Identity = 98/113 (86.73%), Postives = 103/113 (91.15%), Query Frame = 0 

Query: 1   MSTAEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDLI 60
           MS  EIACSYAA+ILYDD I +TAEK+A LVKAA V   +SYW+SLFAKLAEKRNIGDLI
Sbjct: 1   MSVGEIACSYAALILYDDNIPVTAEKLATLVKAAGVDA-ESYWFSLFAKLAEKRNIGDLI 60

Query: 61  MNVGAGGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113
           MNVGAGGGAAVAAAVPAGGA GGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  MNVGAGGGAAVAAAVPAGGA-GGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 111

[Close]
BLAST of MC05g0019 vs. TAIR 10
Match: AT5G47700.1 (60S acidic ribosomal protein family )

HSP 1 Score: 125.9 bits (315), Expect = 2.0e-29
Identity = 80/116 (68.97%), Postives = 92/116 (79.31%), Query Frame = 0 

Query: 1   MST-AEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDL 60
           MST  E+ACSYA MIL D+GI+ITA+KIA LVKAA V+ ++SYW  LFAK+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVT-IESYWPMLFAKMAEKRNVTDL 60

Query: 61  IMNVGA--GGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           IMNVGA  GGGA VAAA PA G  GGAAAAA    E+KK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGAPVAAAAPAAG--GGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

[Close]
BLAST of MC05g0019 vs. TAIR 10
Match: AT5G47700.2 (60S acidic ribosomal protein family )

HSP 1 Score: 125.9 bits (315), Expect = 2.0e-29
Identity = 80/116 (68.97%), Postives = 92/116 (79.31%), Query Frame = 0 

Query: 1   MST-AEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDL 60
           MST  E+ACSYA MIL D+GI+ITA+KIA LVKAA V+ ++SYW  LFAK+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVT-IESYWPMLFAKMAEKRNVTDL 60

Query: 61  IMNVGA--GGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           IMNVGA  GGGA VAAA PA G  GGAAAAA    E+KK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGAPVAAAAPAAG--GGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

[Close]
BLAST of MC05g0019 vs. TAIR 10
Match: AT1G01100.1 (60S acidic ribosomal protein family )

HSP 1 Score: 124.8 bits (312), Expect = 4.4e-29
Identity = 80/116 (68.97%), Postives = 91/116 (78.45%), Query Frame = 0 

Query: 1   MST-AEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDL 60
           MST  E+ACSYA MIL D+GI+ITA+KIA LVKAA VS ++SYW  LFAK+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVS-IESYWPMLFAKMAEKRNVTDL 60

Query: 61  IMNVGA--GGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           IMNVGA  GGGA VAAA P   AAGG AAAA    E+KK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGAPVAAAAP---AAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112

[Close]
BLAST of MC05g0019 vs. TAIR 10
Match: AT1G01100.2 (60S acidic ribosomal protein family )

HSP 1 Score: 124.8 bits (312), Expect = 4.4e-29
Identity = 80/116 (68.97%), Postives = 91/116 (78.45%), Query Frame = 0 

Query: 1   MST-AEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDL 60
           MST  E+ACSYA MIL D+GI+ITA+KIA LVKAA VS ++SYW  LFAK+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVS-IESYWPMLFAKMAEKRNVTDL 60

Query: 61  IMNVGA--GGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           IMNVGA  GGGA VAAA P   AAGG AAAA    E+KK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGAPVAAAAP---AAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112

[Close]
BLAST of MC05g0019 vs. TAIR 10
Match: AT1G01100.4 (60S acidic ribosomal protein family )

HSP 1 Score: 124.8 bits (312), Expect = 4.4e-29
Identity = 80/116 (68.97%), Postives = 91/116 (78.45%), Query Frame = 0 

Query: 1   MST-AEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDL 60
           MST  E+ACSYA MIL D+GI+ITA+KIA LVKAA VS ++SYW  LFAK+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVS-IESYWPMLFAKMAEKRNVTDL 60

Query: 61  IMNVGA--GGGAAVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           IMNVGA  GGGA VAAA P   AAGG AAAA    E+KK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGAPVAAAAP---AAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112

The following BLAST results are available for this feature:
BLAST of MC05g0019 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P528557.1e-3272.8160S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1[more]
Q8LEQ02.8e-2868.9760S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 ... [more]
Q8LCW96.3e-2868.9760S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 ... [more]
O230956.3e-2866.6760S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 ... [more]
Q9HGV05.0e-2562.8360S acidic ribosomal protein P1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / ... [more]
BLAST of MC05g0019 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022144008.12.72e-66100.0060S acidic ribosomal protein P1-like [Momordica charantia][more]
XP_008437779.12.82e-5991.15PREDICTED: 60S acidic ribosomal protein P1-like [Cucumis melo] >KAA0048820.1 60S... [more]
XP_004133766.12.71e-5788.5060S acidic ribosomal protein P1 [Cucumis sativus] >KGN56349.1 hypothetical prote... [more]
XP_038883955.15.47e-5787.6160S acidic ribosomal protein P1-like [Benincasa hispida][more]
XP_022974253.12.34e-5386.7360S acidic ribosomal protein P1-like [Cucurbita maxima] >XP_022975257.1 60S acid... [more]
BLAST of MC05g0019 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CS451.32e-66100.0060S acidic ribosomal protein P1-like OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A5D3DB571.37e-5991.1560S acidic ribosomal protein P1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A1S3AUG91.37e-5991.1560S acidic ribosomal protein P1-like OS=Cucumis melo OX=3656 GN=LOC103483111 PE=... [more]
A0A0A0L5M71.31e-5788.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116860 PE=3 SV=1[more]
A0A6J1ICK41.13e-5386.7360S acidic ribosomal protein P1-like OS=Cucurbita maxima OX=3661 GN=LOC111474378... [more]
BLAST of MC05g0019 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G47700.12.0e-2968.9760S acidic ribosomal protein family [more]
AT5G47700.22.0e-2968.9760S acidic ribosomal protein family [more]
AT1G01100.14.4e-2968.9760S acidic ribosomal protein family [more]
AT1G01100.24.4e-2968.9760S acidic ribosomal protein family [more]
AT1G01100.44.4e-2968.9760S acidic ribosomal protein family [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF00428Ribosomal_60scoord: 21..112
e-value: 8.7E-25
score: 87.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..113
NoneNo IPR availablePANTHERPTHR4569660S ACIDIC RIBOSOMAL PROTEIN P1coord: 1..113
NoneNo IPR availablePANTHERPTHR45696:SF2260S ACIDIC RIBOSOMAL PROTEIN P1-1-RELATEDcoord: 1..113
NoneNo IPR availableCDDcd05831Ribosomal_P1coord: 5..112
e-value: 2.21767E-23
score: 84.6807
IPR038716Ribosomal protein P1/P2, N-terminal domainGENE3D1.10.10.1410coord: 1..64
e-value: 2.2E-28
score: 99.9
IPR027534Ribosomal protein L12/P1/P2 familyHAMAPMF_01478Ribosomal_L12_archcoord: 6..113
score: 14.462992

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC05g0019.1MC05g0019.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032147 activation of protein kinase activity
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0006414 translational elongation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0030295 protein kinase activator activity
molecular_function GO:0043021 ribonucleoprotein complex binding
molecular_function GO:0003735 structural constituent of ribosome