MC04g1125 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g1125
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	rRNA-processing protein UTP23 homolog
Location	MC04: 19300854 .. 19307473 (-)
RNA-Seq Expression	MC04g1125
Synteny	MC04g1125

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CGATGGAATCGTCCATTTCGATATATAAAAAATGATAAATTTGAAAAAGCTGTTAGAAAAAAACAAAGTAAATTAATAATATAAAAATTAATACATAAGCTAAATACAACAAGATATAAGAGGAGATTCGACCACCTCCTACATATTTAATACTTTCTGCTACAAAAAAATTTAAAATACCCCCCGCGTTTGTAATTCCATCAATTACCCGTCGATCAAAAAAATAAGTTAATTCAGCTAATACTCTTATACCACCAATTAAGGATAGTCTATAAAAAGCATCTATGTAACCACGATTATATGACCAATTATATATTATATTTATAATTTTTTCAAAAAAAAAAATTTTAGTAAAACTTTTAACAAATGAATTACGAAAATTCAAATTTTGTAAAGATGAATAAGCGGGCTTATAGAAGAAAGACGCTATAAAGATTCCGAAAAAAGCTATACTCACTGAAAAAGTTGCATTTTTAACAAATTCATACCTACCTCAAACTTCAGGACCAGAACTGTTCATTTTGAAATTACAGGGACCAAATAGACACGTACGTTAAACCTCATCAAAGGTAAGTCAATAGGGGCAAAAACCTAAAAAACCGGTCACGTCGATCAAATCAACTCCGGTTGGTCGGATTTATGGGCGGTTCGGTCCGACTGATGACAATTAACCGAACAATTAAAACGGAAGAAAAAATGGAAAAACTCAGTTCCATAAGCCCTTGAAACCCTTGCCACCCTCGACTCCACAGTCGACCATTGCATTCGAGCTCGCGCTCCGGCCCTTATCCGATCTCAATTGGCAATTGCACGAAAACGCTTCCTCTCACTGTTTTCAATTGCTAGAATCCAGAGTTTCATCGCCAGTTGCAGGAACCAGAAGAACCTCTCCTCTCTCTCACGGTATTTTCCCATCAAATCTCGCATTCCCGATTATTTTCGCTGTAGAATCGCTAATTCTGTGAACTCGATCACTGCGTAGTAGTTTGGTGAATAATGAAAGCAGTGGCTGCCATTTTGATTGAGGGTTTCATGTTTTTTTTTTTTGAAGCTTATGGCATTCGCTTGCCATATGAACGTGAGCCACATAGTGTTATGATTTGGGTTTTTTTTTTGTTTGTTTGTGACGACTGTACACTGAAGACTACTAATGTCGTAATGGAATGATTTGATCCAAATTACAAATATGTTGAGTTTCCTATAGTCCTGTTAAAGAACTCATATGCTCATATTGCTGAATTAAGCTATTCAAATTTCAGATAGTGCATGAATATAATAGGTTCATGGTGGGAATTGGCATGAGTCAATTCTTTGCATTTACTGTTTTTATCACAACTTATTTTGCATTTTTTGTTTTCTGCTTTGTATGTTGATTTTTGATAGATGAGATTCAAAAGGCAAAAGCGTCACCGGAGAGTTGTGAGATTTTACGCTGCATGTTTTGGATTCAGGCAGCCATTTAAAGTCCTATGTGATGGAACTTTTGTGCATCACCTTCTCTCCAATCGTATAGTGCCTGCTGATAATGCCCTTGCCAAAACAATTGGTGGCCCAATCAAGCTTTTCACTACCAGGTCTGTTCCTTTTATTGAGTCAATCACCGCATGTTCTTCCTATGCCCATTTGAAATGTAATTTTTCTTTGTCCCCTGGCTTTGTAGATGTGTACTCTCAGAGTTGAAGGCTCTTGGCCAATCCTATTCAGAAGCTTTTGATGCGGCTAGTAGGCTGCTTATTGCTAGGTCAGCCACAGGCTTATTTCCATCCTTGAATTTGAATAGTTTCTCTTCTCGATGACTGGTGTCAAATCTTGACTTTGTCGTGTTCTTGTTGTATCAGCATCTATAAATATGGGGCAGTATTAATTTGCTTATCCAATCCCGTCTCATCTTAGTTGGAATTACACTTTGTTGTTAGATGTGACCATGAGAGAAGAAAGAGTGCTGAGGCATGCATCAGTGACGTGATTGGCGAGTCAAATGCTGAGCATTTTTTTGTTGCCACTCAGGATACTGATCTCAGGAAGAAGCTGCAAGAGGTCAGTGTATTTCACGAGCTCATACCCATGAATAGTAATTTTCTGTTACAATTATACTCCTTTCATTTGTTTCAGATTTGATTATTTCACAATTGCAAATTATGATCTTTTTCCAACCTTCTAGTTTATGAGCGGTCTCTGATGTCTGCTTTCTTTTTATATACAAGTTTCATTCTGTTTTTGAAAAATAAAATAACTTCTTACAAATAAATTTAGTGTATATAAAAATGTAGTGTGAAATTAATAGTAAGTTCTCTTGGAAGTCGAATTATGTTTATCTGGAGCGATATTTTTATTACTGGTGGCCATTATTTTATTATGTTTCGTTTGAATTCTCCATACCACTTATATGGATGATGAATATGTGAAGGGCTGAAATCTTTAACTTGAAGCCATGTCAACCTGTAACTCTTTTATGTATACGTTAGCAGATACCTGGGGTTCCACTCGTATATGGTCTGAGAAATGCACTTTTCATGGAGCAACCATCTGTCTTGCAACGTCAGTTTGTCAAATCTTCAGAAGAAGAAAGACTGCACATGTCTGAGCTGGAACGTGATCTATTAAAGAAAAGGAAGTACAGAGTGGAAACTGAGGAAACTAATGAAGATAGGGGTTTGGGAGATCAAAATTTAGAGACACAAGCTATGAAAAAGAGAAGCACTTCAAATGAACTGAAGGATAAAATTCAATTTAAGAGAAAGAAAGCAAAGGTACTGTCTATAGTGGCATTTTCTCTCTTCATTGAGACTTGATTTCTGCTTTGATTCTTCACTTTGTTGATCTATCACTTCCTTTACTAGTTTTTGATTTTGATGTTGTAGTCGGCTATATTTTGAGCTTTCTATATTAAAATAACAAGGAATGAAAGAGTGTGTTTTTTTATATTATCTTTCTGGGGAGTGCTTTTAACTTTATTCTGTTTACTAAAAAGGGATTGATTGAACAAAATTTCAGTTGACTATGATTGTATGACGTTGTGATGTGTACTCTGGCTGGTGTCAAATTGTCGAATGCATGTATATATTATCACAGCTTTGACCACACTCTTGGGTTTTCAAGCTTTTTAGCCTAGTATTTGATATGAAAACTTCTTAAACCTTCAAATTGGTTATGACTGATCAAAACTTAACTCTAATATAATAACATGAACAAAACTTTTCTTGAGTTTTAATACATTCCGACACTTGCAGATGATGATAAAGAGACATTTTTCCAGTTTATTACATTACATTAATGAAACTAAATGATTTTCTTCTTGACATGTACTTTTTGATTTCTATTCGGATGTGGGATTGGACTGGTTCATGGTGAAATTCTGTCTGACAATTTTGCTTTCAGATTTGCAATGTTCAATGTTGAAGCATTTAAACTGTGTAGTGTTTGTTTTATTTACTTTTTGATGGTTGAAGTTTACCACTGATTTAGTAATTATGCAATGAGGCACGGTGGTATTCTGCTGCTGCTTTTAGTATGTTTATTATACATTTTCATGATCTATGCATTTACTTTTATTTTCTAACCTCTCCACAAAATTCTTCAGGGTCCGAATCCTCTTTCGTGTAAGAAGAAAAAGGAGAATCCAAGCCAACATCCGGTTTCAGAGAAGGTAGTTTTCATTTTATATAATCTTAGTACTTCTGAATACCCAAGTGTCTGATCCAGAAAACGGATCGGAGGCAAAATTCATTAATAAAATCAAAACCAATACCTAAGAAGCACGGACACGGACACGACAGGACACGGCGATACGTCAATTTCTAAAAAACTAGGACACGGACACGCTGGGGATACGTTATTTATTTATTATTTTTTTTAGGATATAGGTAAATTTAACATAAAAATGCTAAATATACTTCGCTAAAAAACATAAATGTCAAGTAAATTTATTGGGTTGAAGATGTACCCCACTAAAAAGCATAAAAATAGTAAATGTAATCCACTAAAAAATCCTAGAGAAGGATTTGAATTTGATTATTGGGTCGAAGTTGTCATCCTAATTTAGTACATCATATTCTACTCCAGTTTAATTCATATGAAATTAGGGAAAAAAGGAAGTAAGAATAGAGCTTATTTAATTTAACTCGCACAAACAGAAGGGTGGGTCACTAGGTAGCGTTTTAGGGTTTTTTTTTTTGTAGTTTAAGTTGTTGAGATTTCAGCCAAACTTCTTGGACTTCCAAAATTGGGCTAAGGAAACAATATTTTTTTATCTGGCGTGTCCCTCCCGTGTCCAAAACGTGTCCCCACGTGTCTGAAATTAAAATAAAAAATTTAATATTCGGACACTTTAAATTGCGTGTCGGACACGTGTCCGGAGCGTGTCCGGATGTATCCGTGTCCGACACGTGTCCGACACAGACACTCCTCCTTTTTTGCCGTGTCCGTGTTTTATAGACCAATACAAAGGATAGGGGAGATAAGATGACCATTCAATCATGGCCAGGGGAACCTGGCATTGCTTTCACTAGTCATAACAGAAATATACTGAGTTTTGATTCTTTTGAGACTTGTGTCTCTCCTTTGACTTGATATAGTATAGCCTTTTTCTCAGTAGTTATTAAGTTGATCCATAGTTGTTTTCTAATGTGGAAAGCGCATAGCGCTAAATAACACAATTTGAATTTTTTACTAGAATTGTTTCTATAAAAATGATGTAGGAGTACGTATGGGAGACCAGAGATTCAACTCTTTGGGGCTACTTGGTTCACGTGAATCATAGATTATCTAAAAAATTCAATATTCCAACATTTTTCCTTTGAGATTTGTTTTTGAAAATTGAGGGAGACGTCTTATGTAGCATAAGAGAAAACCCTTAAAATAGTCCCTTACTTCTCCACAGCGACATTTTTATTTGAAGTTTTGTCTTGCTAAACTTGTATTAGTAGTTAGCTCTTGGAGTCGAGTTGGTAAGGTTTTCTTTGAACTCGAAAACCAAGATTGTTGATTGTGAAGTCCTCAACTGCATTTTTATGCATGGCTGCTTTATGCTAGTTGGAATCATCTATCCAAGACCTTTAGGCTTCTTCATGAGATTTTTTACTTCTTTTCTAAGCTTCTCTCTTGGTGGTAAAACCAGAAAGTTCATCTTTTAATGTGAGGAAAGCTCTTCGTTAGAACATTTGGATCAATGAGAGTTCGTTGATCTTATTCATTTATTGCATCTAATAGATCACATCAGAAGCTCAATCCTCCTAGATTGCAATTATTCTCTCTCCATAATCAATCCCAGCTGGAGTATTTTGTTTGTTTGGTTTTCTTGTAAAAAAAGTTCACAATCTTTTTTAGTTTCATCTTGCACACTAGACACAAGATAATTACCTTATATTTCTTTGCACTGCATTTTAATGTTGGTATGAATATATATCCATCCTCCTTATGCAGCATAAGAAGGATAATGATAGTGCTGCTGAAAGCAGGACACGGAAACGAAAGCGGTCTCGTAAAGCCAAAATGCCAGCAACGACTATGGGCACACCATAGTTGGGGTCCTCCTCTGTTGTGGCTTTGGAAGTTTTGCTGCTTTGAGGTAAATGTTAAAAGTGATTTTGTTTTAACTTAAGGTATTCCCTGGTTAGAGAGGATTAGAAGTTGGAATTTAGATGGGAGTTTTTGCTCTTCCCTACTAAGAAATTGGAGCTTCCATTTATAAGGAAATTGTATTACTCCACTAGTCCATATTATTTTGTGTTCTTCTGATTATATAGTCCAAGGAAATTGATTCTTCCTTTCGCTTGTGTTAGATTTTCTTTAAAAAATTATTTTTTTGGGTATAATTCCTCATTTTAGTCCCGGCTTTTAGAATGTTTCTATTTTAACTTTTTAACTTCAAAAAATGTATATTTTAGTCCATAATTTTATTCTATTTTAGTATTTGGACTTCTGAAATATCTATTTTAGTTTTTTACCTTAAAAAATTATTTTGCTCTTAATTGTCTAATAGATTTATAATATGACTTTGGGATGTGTACTTGATTGGAGTCTCATAGGTTGACTAGGGCGGGGCTTTTTTTTTTATTTATTTATGGATAACTGGAAGTAAGCTCCCCTATACGTGTGATGCCTGCCATAAAGTCTAAACCTTAGAGACATAAAAGATTTTTGGTATTAAGCTTACCAGAAAGTTCAAATTTTTTAGGTCTCTTAGTTGGTATGACGAAGAGACTCCAAGTCATTGTCAATTGGATTGTCTTTTGTTTGGGCAAATTGGGGGTATTAGGTGACTAGAGATGACCAAAATTGTTGTGCAAAAGTTGAGGGACTAAAATGATTATTATCTTAAACTTTTAATTGTTTTATTTTAGTTCTTTTTAACTTTCCATTGGTGTAACTTGTTGCAACTTCAAATATTGGTCTATTTAGATATTTGTTAATCTAAGTGAACAATAGAATACATGTCCAATTTATGTTGAATATTTTACTTAAACTTAATAGCAAGGATTAAATTGGGTTGTAATTCAAAGTTCTATAACTAAAATTCCAATGAATAAGATTCACATTAGATAAATTTTTTCACCTATTATTGTCTGTTGTAAATAATGTCTAAACTTGTTTAATATGGTGTGAGACACATTTATTTCAAC

mRNA sequence

CGATGGAATCGTCCATTTCGATATATAAAAAATGATAAATTTGAAAAAGCTGTTAGAAAAAAACAAAGTAAATTAATAATATAAAAATTAATACATAAGCTAAATACAACAAGATATAAGAGGAGATTCGACCACCTCCTACATATTTAATACTTTCTGCTACAAAAAAATTTAAAATACCCCCCGCGTTTGTAATTCCATCAATTACCCGTCGATCAAAAAAATAAGTTAATTCAGCTAATACTCTTATACCACCAATTAAGGATAGTCTATAAAAAGCATCTATGTAACCACGATTATATGACCAATTATATATTATATTTATAATTTTTTCAAAAAAAAAAATTTTAGTAAAACTTTTAACAAATGAATTACGAAAATTCAAATTTTGTAAAGATGAATAAGCGGGCTTATAGAAGAAAGACGCTATAAAGATTCCGAAAAAAGCTATACTCACTGAAAAAGTTGCATTTTTAACAAATTCATACCTACCTCAAACTTCAGGACCAGAACTGTTCATTTTGAAATTACAGGGACCAAATAGACACGTACGTTAAACCTCATCAAAGGTAAGTCAATAGGGGCAAAAACCTAAAAAACCGGTCACGTCGATCAAATCAACTCCGGTTGGTCGGATTTATGGGCGGTTCGGTCCGACTGATGACAATTAACCGAACAATTAAAACGGAAGAAAAAATGGAAAAACTCAGTTCCATAAGCCCTTGAAACCCTTGCCACCCTCGACTCCACAGTCGACCATTGCATTCGAGCTCGCGCTCCGGCCCTTATCCGATCTCAATTGGCAATTGCACGAAAACGCTTCCTCTCACTGTTTTCAATTGCTAGAATCCAGAGTTTCATCGCCAGTTGCAGGAACCAGAAGAACCTCTCCTCTCTCTCACGATGAGATTCAAAAGGCAAAAGCGTCACCGGAGAGTTGTGAGATTTTACGCTGCATGTTTTGGATTCAGGCAGCCATTTAAAGTCCTATGTGATGGAACTTTTGTGCATCACCTTCTCTCCAATCGTATAGTGCCTGCTGATAATGCCCTTGCCAAAACAATTGGTGGCCCAATCAAGCTTTTCACTACCAGATGTGTACTCTCAGAGTTGAAGGCTCTTGGCCAATCCTATTCAGAAGCTTTTGATGCGGCTAGTAGGCTGCTTATTGCTAGATGTGACCATGAGAGAAGAAAGAGTGCTGAGGCATGCATCAGTGACGTGATTGGCGAGTCAAATGCTGAGCATTTTTTTGTTGCCACTCAGGATACTGATCTCAGGAAGAAGCTGCAAGAGATACCTGGGGTTCCACTCGTATATGGTCTGAGAAATGCACTTTTCATGGAGCAACCATCTGTCTTGCAACGTCAGTTTGTCAAATCTTCAGAAGAAGAAAGACTGCACATGTCTGAGCTGGAACGTGATCTATTAAAGAAAAGGAAGTACAGAGTGGAAACTGAGGAAACTAATGAAGATAGGGGTTTGGGAGATCAAAATTTAGAGACACAAGCTATGAAAAAGAGAAGCACTTCAAATGAACTGAAGGATAAAATTCAATTTAAGAGAAAGAAAGCAAAGGGTCCGAATCCTCTTTCGTGTAAGAAGAAAAAGGAGAATCCAAGCCAACATCCGGTTTCAGAGAAGCATAAGAAGGATAATGATAGTGCTGCTGAAAGCAGGACACGGAAACGAAAGCGGTCTCGTAAAGCCAAAATGCCAGCAACGACTATGGGCACACCATAGTTGGGGTCCTCCTCTGTTGTGGCTTTGGAAGTTTTGCTGCTTTGAGGTAAATGTTAAAAGTGATTTTGTTTTAACTTAAGGTATTCCCTGGTTAGAGAGGATTAGAAGTTGGAATTTAGATGGGAGTTTTTGCTCTTCCCTACTAAGAAATTGGAGCTTCCATTTATAAGGAAATTGTATTACTCCACTAGTCCATATTATTTTGTGTTCTTCTGATTATATAGTCCAAGGAAATTGATTCTTCCTTTCGCTTGTGTTAGATTTTCTTTAAAAAATTATTTTTTTGGGTATAATTCCTCATTTTAGTCCCGGCTTTTAGAATGTTTCTATTTTAACTTTTTAACTTCAAAAAATGTATATTTTAGTCCATAATTTTATTCTATTTTAGTATTTGGACTTCTGAAATATCTATTTTAGTTTTTTACCTTAAAAAATTATTTTGCTCTTAATTGTCTAATAGATTTATAATATGACTTTGGGATGTGTACTTGATTGGAGTCTCATAGGTTGACTAGGGCGGGGCTTTTTTTTTTATTTATTTATGGATAACTGGAAGTAAGCTCCCCTATACGTGTGATGCCTGCCATAAAGTCTAAACCTTAGAGACATAAAAGATTTTTGGTATTAAGCTTACCAGAAAGTTCAAATTTTTTAGGTCTCTTAGTTGGTATGACGAAGAGACTCCAAGTCATTGTCAATTGGATTGTCTTTTGTTTGGGCAAATTGGGGGTATTAGGTGACTAGAGATGACCAAAATTGTTGTGCAAAAGTTGAGGGACTAAAATGATTATTATCTTAAACTTTTAATTGTTTTATTTTAGTTCTTTTTAACTTTCCATTGGTGTAACTTGTTGCAACTTCAAATATTGGTCTATTTAGATATTTGTTAATCTAAGTGAACAATAGAATACATGTCCAATTTATGTTGAATATTTTACTTAAACTTAATAGCAAGGATTAAATTGGGTTGTAATTCAAAGTTCTATAACTAAAATTCCAATGAATAAGATTCACATTAGATAAATTTTTTCACCTATTATTGTCTGTTGTAAATAATGTCTAAACTTGTTTAATATGGTGTGAGACACATTTATTTCAAC

Coding sequence (CDS)

ATGAGATTCAAAAGGCAAAAGCGTCACCGGAGAGTTGTGAGATTTTACGCTGCATGTTTTGGATTCAGGCAGCCATTTAAAGTCCTATGTGATGGAACTTTTGTGCATCACCTTCTCTCCAATCGTATAGTGCCTGCTGATAATGCCCTTGCCAAAACAATTGGTGGCCCAATCAAGCTTTTCACTACCAGATGTGTACTCTCAGAGTTGAAGGCTCTTGGCCAATCCTATTCAGAAGCTTTTGATGCGGCTAGTAGGCTGCTTATTGCTAGATGTGACCATGAGAGAAGAAAGAGTGCTGAGGCATGCATCAGTGACGTGATTGGCGAGTCAAATGCTGAGCATTTTTTTGTTGCCACTCAGGATACTGATCTCAGGAAGAAGCTGCAAGAGATACCTGGGGTTCCACTCGTATATGGTCTGAGAAATGCACTTTTCATGGAGCAACCATCTGTCTTGCAACGTCAGTTTGTCAAATCTTCAGAAGAAGAAAGACTGCACATGTCTGAGCTGGAACGTGATCTATTAAAGAAAAGGAAGTACAGAGTGGAAACTGAGGAAACTAATGAAGATAGGGGTTTGGGAGATCAAAATTTAGAGACACAAGCTATGAAAAAGAGAAGCACTTCAAATGAACTGAAGGATAAAATTCAATTTAAGAGAAAGAAAGCAAAGGGTCCGAATCCTCTTTCGTGTAAGAAGAAAAAGGAGAATCCAAGCCAACATCCGGTTTCAGAGAAGCATAAGAAGGATAATGATAGTGCTGCTGAAAGCAGGACACGGAAACGAAAGCGGTCTCGTAAAGCCAAAATGCCAGCAACGACTATGGGCACACCATAG

Protein sequence

MRFKRQKRHRRVVRFYAACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPIKLFTTRCVLSELKALGQSYSEAFDAASRLLIARCDHERRKSAEACISDVIGESNAEHFFVATQDTDLRKKLQEIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKRKYRVETEETNEDRGLGDQNLETQAMKKRSTSNELKDKIQFKRKKAKGPNPLSCKKKKENPSQHPVSEKHKKDNDSAAESRTRKRKRSRKAKMPATTMGTP

Homology

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BLAST of MC04g1125 vs. ExPASy Swiss-Prot
Match: Q9BRU9 (rRNA-processing protein UTP23 homolog OS=Homo sapiens OX=9606 GN=UTP23 PE=1 SV=2)

HSP 1 Score: 119.8 bits (299), Expect = 5.0e-26
Identity = 93/273 (34.07%), Postives = 138/273 (50.55%), Query Frame = 0


Query: 1   MRFKRQKRHRRVVRFYAACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPIKL 60
           M+  RQK  ++ + F+   FG R+P+++L DGTF    L  RI   +  L + + G  +L
Sbjct: 1   MKITRQKHAKKHLGFFRNNFGVREPYQILLDGTFCQAALRGRIQLREQ-LPRYLMGETQL 60

Query: 61  FTTRCVLSELKALGQSYSEAFDAASRLLIARCDH-ERRKSAEACISDVIGESNAEHFFVA 120
            TTRCVL EL+ LG+    A   A +  +  C H +   S   C+  ++ E N  H+FVA
Sbjct: 61  CTTRCVLKELETLGKDLYGAKLIAQKCQVRNCPHFKNAVSGSECLLSMVEEGNPHHYFVA 120

Query: 121 TQDTDLRKKLQEIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKR 180
           TQD +L  K+++ PGVPL++ ++N + +++PS     FVK+ E  +L +S  E++ +K  
Sbjct: 121 TQDQNLSVKVKKKPGVPLMFIIQNTMVLDKPSPKTIAFVKAVESGQL-VSVHEKESIKHL 180

Query: 181 KYRVETEETNEDRGLGDQNLETQAMKKRSTSNELKDKIQFKRKKAKGPNPLSCKKKKENP 240
           K                   E Q + K +  +  K     KRKK  GPNPLSC KKK   
Sbjct: 181 K-------------------EEQGLVKNTEQSRRK-----KRKKISGPNPLSCLKKK--- 237

Query: 241 SQHPVSEKHKKDNDSAAESRTRKRKRSRKAKMP 273
                  K   D  S+A  + RKRKR R    P
Sbjct: 241 -------KKAPDTQSSASEKKRKRKRIRNRSNP 237

[Close]

BLAST of MC04g1125 vs. ExPASy Swiss-Prot
Match: Q9CX11 (rRNA-processing protein UTP23 homolog OS=Mus musculus OX=10090 GN=Utp23 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.5e-25
Identity = 91/268 (33.96%), Postives = 140/268 (52.24%), Query Frame = 0


Query: 1   MRFKRQKRHRRVVRFYAACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPIKL 60
           M+  RQK  ++ + F+   FG R+P+++L DGTF    L  RI   D  L + + G  +L
Sbjct: 1   MKITRQKHAKKHLGFFRNNFGVREPYQILLDGTFCQAALRGRIQLRDQ-LPRYLMGETQL 60

Query: 61  FTTRCVLSELKALGQSYSEAFDAASRLLIARCDHERRK-SAEACISDVIGESNAEHFFVA 120
            TTRCVL EL+ LG+    A   A +  +  C H +   S   C+  ++ E N  H+FVA
Sbjct: 61  CTTRCVLKELETLGKELYGAKLIAQKCQVRNCPHFKSPVSGSECLLSMVDEGNPHHYFVA 120

Query: 121 TQDTDLRKKLQEIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKR 180
           TQD +L  K++  PG+PL++ ++N + +++PS     FVK+ E  +L +S  E+  +K+ 
Sbjct: 121 TQDQNLSVKVKRTPGIPLMFIIQNTIVLDKPSPRTVAFVKAVEAGQL-VSVHEKQSIKQL 180

Query: 181 KYRVETEETNEDRGLGDQNLETQAMKKRSTSNELKDKIQFKRKKAKGPNPLSCKKKKENP 240
           K         E++GL    +    +++R          + K+KK  GPNPLSC KKK   
Sbjct: 181 K---------EEQGL----VRNPDLRRR----------RRKKKKVGGPNPLSCLKKK--- 233

Query: 241 SQHPVSEKHKKDNDSAAESRTRKRKRSR 268
                  K  +D  S A  + RKRKR R
Sbjct: 241 -------KKAQDTKSPASEKKRKRKRIR 233

[Close]

BLAST of MC04g1125 vs. ExPASy Swiss-Prot
Match: Q08DU1 (rRNA-processing protein UTP23 homolog OS=Bos taurus OX=9913 GN=UTP23 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.7e-24
Identity = 87/268 (32.46%), Postives = 141/268 (52.61%), Query Frame = 0


Query: 1   MRFKRQKRHRRVVRFYAACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPIKL 60
           M+  RQK  ++ + F+   FG R+P+++L DGTF    L  RI   +  L + +    +L
Sbjct: 1   MKITRQKHAKKHLGFFRNNFGVREPYQILLDGTFCQAALRGRIQLREQ-LPRYLMAETQL 60

Query: 61  FTTRCVLSELKALGQSYSEAFDAASRLLIARCDH-ERRKSAEACISDVIGESNAEHFFVA 120
            TTRCVL EL+ LG+    A   A +  +  C H +   S   C+  ++ + N  H+F+A
Sbjct: 61  CTTRCVLKELETLGKDLYGAKLIAQKCQVRNCPHFKNAVSGSECLLSMVEDGNPHHYFLA 120

Query: 121 TQDTDLRKKLQEIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKR 180
           TQD +L  K+++ PG+PL++ ++N + +++PS     FVK+ E  +L +S  E+  +++ 
Sbjct: 121 TQDQNLSMKVKKKPGIPLMFIIQNTIVLDKPSPKTIAFVKAVESGQL-VSVHEKQSIRQL 180

Query: 181 KYRVETEETNEDRGLGDQNLETQAMKKRSTSNELKDKIQFKRKKAKGPNPLSCKKKKENP 240
           K         E++GL    ++    ++R            KRKK  GPNPLSC KKK   
Sbjct: 181 K---------EEQGL----VKDPEQRRRK-----------KRKKVSGPNPLSCLKKK--- 232

Query: 241 SQHPVSEKHKKDNDSAAESRTRKRKRSR 268
                  K  +D +S+A  + RKRKR R
Sbjct: 241 -------KKTQDTNSSASEKKRKRKRIR 232

[Close]

BLAST of MC04g1125 vs. ExPASy Swiss-Prot
Match: O74862 (rRNA-processing protein utp23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=utp23 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.2e-19
Identity = 86/271 (31.73%), Postives = 129/271 (47.60%), Query Frame = 0


Query: 1   MRFKRQKRHRRVVRFYAACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPIKL 60
           MR KR K +R+++  Y   FGFR+P++VL D  F+   LS + +    ALA+T+ G IK 
Sbjct: 1   MRQKRAKNYRKLMHTYQLLFGFREPYQVLVDADFLKD-LSQQKIDIQAALARTVQGAIKP 60

Query: 61  FTTRCVLSELKALGQSYSEAFDAASRLLIARCDH-ERRKSAEACISDV--IGESNAEHFF 120
             T+C + +L +      +    A      RC H +   S   CI  V  I   N   + 
Sbjct: 61  MITQCCIRQLYSKSDELKQEIRIAKSFERRRCGHIDEALSPSECIQSVVNINGRNKHRYV 120

Query: 121 VATQDTDLRKKLQEIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLK 180
           VATQD +LR+ L+ +PGVPL+Y  R+ + +E  S        + E  ++ MS+ E+ LL 
Sbjct: 121 VATQDPELRQALRSVPGVPLIYMKRSVVILEPASRATLLEKHNKESVQMGMSKEEKLLLS 180

Query: 181 KRKYRVETEETNEDRGLGDQNLETQAMKKRSTSNELKDKIQFKRKKAKGPNPLSCKKKKE 240
            +K        NE   L   + +T+     + + +   K   KRK  KGPNPLS KK+  
Sbjct: 181 GKK-----RSANE---LAIDDQDTKESTDLAGTEDSAPKANKKRKGPKGPNPLSIKKR-- 240

Query: 241 NPSQHPVSEKHKKDNDSAAESRTRKRKRSRK 269
           +   H   E     N        +K +R RK
Sbjct: 241 SSKNHTTDEPTLPVNIIGDVGERKKHRRKRK 260

[Close]

BLAST of MC04g1125 vs. ExPASy Swiss-Prot
Match: Q12339 (rRNA-processing protein UTP23 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UTP23 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.9e-18
Identity = 87/280 (31.07%), Postives = 138/280 (49.29%), Query Frame = 0


Query: 1   MRFKRQKRHRRVVRFYAACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPIKL 60
           MR KR K +R+ +  Y+  F FR+P++VL D   V    +N      + L +T+   +K+
Sbjct: 1   MRQKRAKSYRKQLLVYSHTFKFREPYQVLVDNQLVLE-CNNSNFNLPSGLKRTLQADVKV 60

Query: 61  FTTRCVLSELKALGQSYSE-AFDAASRLLIARCDHERR--KSAEACISDVIGES--NAEH 120
             T+C    ++AL ++ ++ A + A +    RC+H  +  KS   CI  V+  S  N   
Sbjct: 61  MITQCC---IQALYETRNDGAINLAKQFERRRCNHSFKDPKSPAECIESVVNISGANKHR 120

Query: 121 FFVATQDTDLRKKLQEIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDL 180
           + VA+QD DLR+KL+ +PGVPL++  R+ + ME  S    +  K +EE++L+        
Sbjct: 121 YVVASQDIDLRRKLRTVPGVPLIHLTRSVMVMEPLSTASAKASKITEEQKLY-------- 180

Query: 181 LKKRKYRVETEETNEDRGLGDQNLETQAMKKRSTSNELKDKIQFKRKKA-KGPNPLSCKK 240
                           +GL D N+E     + S     K+ I  KRK   K PNPLS KK
Sbjct: 181 ----------------KGLNDPNIE---KLQESGDGSGKESITKKRKLGPKAPNPLSVKK 240

Query: 241 KKENPSQHPVSEKHKKDNDSAAESRTRKRKRSRKAKMPAT 275
           KK+  S  P  E   K++ S  + + R+RK      +P +
Sbjct: 241 KKKVNS--PSDEVKDKEDTSKEKKKRRRRKHKSNTNVPVS 247

[Close]

BLAST of MC04g1125 vs. NCBI nr
Match: XP_022141733.1 (rRNA-processing protein UTP23 homolog [Momordica charantia])

HSP 1 Score: 528 bits (1361), Expect = 9.62e-189
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0


Query: 1   MRFKRQKRHRRVVRFYAACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPIKL 60
           MRFKRQKRHRRVVRFYAACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPIKL
Sbjct: 1   MRFKRQKRHRRVVRFYAACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPIKL 60

Query: 61  FTTRCVLSELKALGQSYSEAFDAASRLLIARCDHERRKSAEACISDVIGESNAEHFFVAT 120
           FTTRCVLSELKALGQSYSEAFDAASRLLIARCDHERRKSAEACISDVIGESNAEHFFVAT
Sbjct: 61  FTTRCVLSELKALGQSYSEAFDAASRLLIARCDHERRKSAEACISDVIGESNAEHFFVAT 120

Query: 121 QDTDLRKKLQEIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKRK 180
           QDTDLRKKLQEIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKRK
Sbjct: 121 QDTDLRKKLQEIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKRK 180

Query: 181 YRVETEETNEDRGLGDQNLETQAMKKRSTSNELKDKIQFKRKKAKGPNPLSCKKKKENPS 240
           YRVETEETNEDRGLGDQNLETQAMKKRSTSNELKDKIQFKRKKAKGPNPLSCKKKKENPS
Sbjct: 181 YRVETEETNEDRGLGDQNLETQAMKKRSTSNELKDKIQFKRKKAKGPNPLSCKKKKENPS 240

Query: 241 QHPVSEKHKKDNDSAAESRTRKRKRSRKAKMPATTMGTP 279
           QHPVSEKHKKDNDSAAESRTRKRKRSRKAKMPATTMGTP
Sbjct: 241 QHPVSEKHKKDNDSAAESRTRKRKRSRKAKMPATTMGTP 279

[Close]

BLAST of MC04g1125 vs. NCBI nr
Match: XP_004143766.1 (rRNA-processing protein UTP23 homolog isoform X1 [Cucumis sativus] >XP_011655273.1 rRNA-processing protein UTP23 homolog isoform X1 [Cucumis sativus] >XP_011655274.1 rRNA-processing protein UTP23 homolog isoform X1 [Cucumis sativus] >XP_031742195.1 rRNA-processing protein UTP23 homolog isoform X1 [Cucumis sativus] >XP_031742196.1 rRNA-processing protein UTP23 homolog isoform X1 [Cucumis sativus] >XP_031742197.1 rRNA-processing protein UTP23 homolog isoform X1 [Cucumis sativus] >XP_031742198.1 rRNA-processing protein UTP23 homolog isoform X1 [Cucumis sativus] >KAE8648473.1 hypothetical protein Csa_007759 [Cucumis sativus])

HSP 1 Score: 374 bits (961), Expect = 8.21e-128
Identity = 203/279 (72.76%), Postives = 235/279 (84.23%), Query Frame = 0


Query: 1   MRFKRQKRHRRVVRFYAACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPIKL 60
           MR K+QKR RR VRFY  C GFR PFK+ CDGTFV+HLLSN+I+PAD A+AKT+G  +KL
Sbjct: 1   MRIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60

Query: 61  FTTRCVLSELKALGQSYSEAFDAASRLLIARCDHERRKSAEACISDVIGESNAEHFFVAT 120
           FTTRCVL ELKALGQSYS AF+AAS+L  ARCDHE+RKSAEACI DVIGESN EHFFVAT
Sbjct: 61  FTTRCVLLELKALGQSYSGAFEAASQLFTARCDHEKRKSAEACILDVIGESNPEHFFVAT 120

Query: 121 QDTDLRKKLQEIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKR- 180
           QDT+LRK+LQ+IPGVPL++GLRNALFMEQPS +QRQFVKS EE+R+H+SE+ERDLLKK+ 
Sbjct: 121 QDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDVQRQFVKSLEEKRMHVSEVERDLLKKKT 180

Query: 181 KYRVETEETNEDRGLGDQNLETQAMKKRSTS--NELKDKIQFKRKKAKGPNPLSCKKKKE 240
           KY VE E+TNED  L DQNL+T  +KK+  +  + LKD+ QFKR KAKGPNPLSC KKK 
Sbjct: 181 KYVVEAEKTNEDEDLEDQNLDTLVLKKKKKNIPSNLKDRPQFKRNKAKGPNPLSCLKKKV 240

Query: 241 NPSQHPVSEKHKKDNDSAAESRTRKRKRSRKAKMPATTM 276
            PS HPVSEK KKD+DS A+ RTRKRKRSRKAK P  T+
Sbjct: 241 KPSPHPVSEK-KKDDDSVAQKRTRKRKRSRKAKAPTETV 278

[Close]

BLAST of MC04g1125 vs. NCBI nr
Match: XP_008465424.1 (PREDICTED: rRNA-processing protein UTP23 homolog [Cucumis melo] >XP_008465433.1 PREDICTED: rRNA-processing protein UTP23 homolog [Cucumis melo] >XP_008465440.1 PREDICTED: rRNA-processing protein UTP23 homolog [Cucumis melo] >XP_008465448.1 PREDICTED: rRNA-processing protein UTP23 homolog [Cucumis melo] >XP_008465455.1 PREDICTED: rRNA-processing protein UTP23 homolog [Cucumis melo] >XP_008465460.1 PREDICTED: rRNA-processing protein UTP23 homolog [Cucumis melo])

HSP 1 Score: 374 bits (960), Expect = 1.13e-127
Identity = 202/278 (72.66%), Postives = 232/278 (83.45%), Query Frame = 0


Query: 1   MRFKRQKRHRRVVRFYAACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPIKL 60
           MR K+QKR RR VRFY  C GFR PFK+ CDGTFV+HLLSN+I+PAD A+AKT+G  +KL
Sbjct: 1   MRIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60

Query: 61  FTTRCVLSELKALGQSYSEAFDAASRLLIARCDHERRKSAEACISDVIGESNAEHFFVAT 120
           FTTRCVL ELKALGQSY+ AF+AAS+L  ARCDHE+RKSAEACI DVIGESN EHFFVAT
Sbjct: 61  FTTRCVLLELKALGQSYAGAFEAASQLFTARCDHEKRKSAEACILDVIGESNPEHFFVAT 120

Query: 121 QDTDLRKKLQEIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKR- 180
           QDT+LRK+LQ+IPGVPL++GLRN LFMEQPS +QRQFVKS EE+R+HMSE ERDLLKK+ 
Sbjct: 121 QDTNLRKQLQQIPGVPLIFGLRNTLFMEQPSDVQRQFVKSLEEKRMHMSEAERDLLKKKM 180

Query: 181 KYRVETEETNEDRGLGDQNLETQAMKKRSTS-NELKDKIQFKRKKAKGPNPLSCKKKKEN 240
           KY VE E+TNED  LGDQNL+ Q +KK+    + LKD+ QFKR KAKGPNPLSC KKK  
Sbjct: 181 KYVVEAEKTNEDEDLGDQNLDAQVLKKKKNILSNLKDRPQFKRNKAKGPNPLSCLKKKVK 240

Query: 241 PSQHPVSEKHKKDNDSAAESRTRKRKRSRKAKMPATTM 276
           PS HPVSEK KKD+D  A+ RTRKRKRSRKAK P  T+
Sbjct: 241 PSPHPVSEK-KKDDDDLAQKRTRKRKRSRKAKAPTETV 277

[Close]

BLAST of MC04g1125 vs. NCBI nr
Match: XP_011655276.1 (rRNA-processing protein UTP23 homolog isoform X2 [Cucumis sativus])

HSP 1 Score: 373 bits (957), Expect = 3.22e-127
Identity = 202/279 (72.40%), Postives = 234/279 (83.87%), Query Frame = 0


Query: 1   MRFKRQKRHRRVVRFYAACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPIKL 60
           MR K+QKR RR VRFY  C GFR PFK+ CDGTFV+HLLSN+I+PAD A+AKT+G  +KL
Sbjct: 1   MRIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60

Query: 61  FTTRCVLSELKALGQSYSEAFDAASRLLIARCDHERRKSAEACISDVIGESNAEHFFVAT 120
           FTTRCVL ELKALGQSYS AF+AAS+L  ARCDHE+RKSAEACI DVIGESN EHFFVAT
Sbjct: 61  FTTRCVLLELKALGQSYSGAFEAASQLFTARCDHEKRKSAEACILDVIGESNPEHFFVAT 120

Query: 121 QDTDLRKKLQEIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKR- 180
           QDT+LRK+LQ+IPGVPL++GLRNALFMEQPS +QRQFVKS EE+R+H+SE+ERDLLKK+ 
Sbjct: 121 QDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDVQRQFVKSLEEKRMHVSEVERDLLKKKT 180

Query: 181 KYRVETEETNEDRGLGDQNLETQAMKKRSTS--NELKDKIQFKRKKAKGPNPLSCKKKKE 240
           KY VE E+TNED  L DQNL+T  +KK+  +  + LKD+ QFKR KAKGPNPLSC KKK 
Sbjct: 181 KYVVEAEKTNEDEDLEDQNLDTLVLKKKKKNIPSNLKDRPQFKRNKAKGPNPLSCLKKKV 240

Query: 241 NPSQHPVSEKHKKDNDSAAESRTRKRKRSRKAKMPATTM 276
            PS HPVSEK  KD+DS A+ RTRKRKRSRKAK P  T+
Sbjct: 241 KPSPHPVSEK--KDDDSVAQKRTRKRKRSRKAKAPTETV 277

[Close]

BLAST of MC04g1125 vs. NCBI nr
Match: KAG7032659.1 (rRNA-processing protein UTP23-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 350 bits (897), Expect = 4.90e-118
Identity = 194/283 (68.55%), Postives = 228/283 (80.57%), Query Frame = 0


Query: 1   MRFKRQKRHRRVVRFYAACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPIKL 60
           MRFK+QKRHR+ VRFY  CFGFR+PFKVLCDGTFVHHLLSN+I+PAD ALAK +GG +K+
Sbjct: 1   MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKV 60

Query: 61  FTTRCVLSELKALGQSYSEAFDAASRLLIARCDHERRKSAEACISDVIGESNAEHFFVAT 120
           FTTRCVL ELKALG SYS+AF+AAS L  ARCDHE RK A  CI +VIG+SNAEHFFVAT
Sbjct: 61  FTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHAVTCIMEVIGKSNAEHFFVAT 120

Query: 121 QDTDLRKKLQEIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKK-- 180
           QDTDL+K+LQEIPGVPL++GLRNALFMEQP+ L+RQFVKSSEE+R H+SE+E +LL+K  
Sbjct: 121 QDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLRKVT 180

Query: 181 RKYRVETEETNEDRGLGDQNLETQAM----KKRSTSNELKDKIQFKRKKAKGPNPLSC-- 240
           +    ETE+TNED  L D+N E Q +    KK+   N+LKD+ QFKRKK KGPNPLSC  
Sbjct: 181 KDDEEETEKTNEDGDLVDKNSEMQVLEKKKKKKGNLNDLKDRPQFKRKKTKGPNPLSCLK 240

Query: 241 KKKKENPSQHPVSEKHKKDNDSAAESRTRKRKRSRKAKMPATT 275
           KKKK +P+QHPVSEK   DN +    RTRKRKR+RK K  A T
Sbjct: 241 KKKKVDPNQHPVSEKKADDNTTK---RTRKRKRARKTKTTAET 280

[Close]

BLAST of MC04g1125 vs. ExPASy TrEMBL
Match: A0A6J1CLD6 (rRNA-processing protein UTP23 homolog OS=Momordica charantia OX=3673 GN=LOC111012016 PE=4 SV=1)

HSP 1 Score: 528 bits (1361), Expect = 4.66e-189
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0


Query: 1   MRFKRQKRHRRVVRFYAACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPIKL 60
           MRFKRQKRHRRVVRFYAACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPIKL
Sbjct: 1   MRFKRQKRHRRVVRFYAACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPIKL 60

Query: 61  FTTRCVLSELKALGQSYSEAFDAASRLLIARCDHERRKSAEACISDVIGESNAEHFFVAT 120
           FTTRCVLSELKALGQSYSEAFDAASRLLIARCDHERRKSAEACISDVIGESNAEHFFVAT
Sbjct: 61  FTTRCVLSELKALGQSYSEAFDAASRLLIARCDHERRKSAEACISDVIGESNAEHFFVAT 120

Query: 121 QDTDLRKKLQEIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKRK 180
           QDTDLRKKLQEIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKRK
Sbjct: 121 QDTDLRKKLQEIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKRK 180

Query: 181 YRVETEETNEDRGLGDQNLETQAMKKRSTSNELKDKIQFKRKKAKGPNPLSCKKKKENPS 240
           YRVETEETNEDRGLGDQNLETQAMKKRSTSNELKDKIQFKRKKAKGPNPLSCKKKKENPS
Sbjct: 181 YRVETEETNEDRGLGDQNLETQAMKKRSTSNELKDKIQFKRKKAKGPNPLSCKKKKENPS 240

Query: 241 QHPVSEKHKKDNDSAAESRTRKRKRSRKAKMPATTMGTP 279
           QHPVSEKHKKDNDSAAESRTRKRKRSRKAKMPATTMGTP
Sbjct: 241 QHPVSEKHKKDNDSAAESRTRKRKRSRKAKMPATTMGTP 279

[Close]

BLAST of MC04g1125 vs. ExPASy TrEMBL
Match: A0A1S3CNY6 (rRNA-processing protein UTP23 homolog OS=Cucumis melo OX=3656 GN=LOC103503039 PE=4 SV=1)

HSP 1 Score: 374 bits (960), Expect = 5.45e-128
Identity = 202/278 (72.66%), Postives = 232/278 (83.45%), Query Frame = 0


Query: 1   MRFKRQKRHRRVVRFYAACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPIKL 60
           MR K+QKR RR VRFY  C GFR PFK+ CDGTFV+HLLSN+I+PAD A+AKT+G  +KL
Sbjct: 1   MRIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60

Query: 61  FTTRCVLSELKALGQSYSEAFDAASRLLIARCDHERRKSAEACISDVIGESNAEHFFVAT 120
           FTTRCVL ELKALGQSY+ AF+AAS+L  ARCDHE+RKSAEACI DVIGESN EHFFVAT
Sbjct: 61  FTTRCVLLELKALGQSYAGAFEAASQLFTARCDHEKRKSAEACILDVIGESNPEHFFVAT 120

Query: 121 QDTDLRKKLQEIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKR- 180
           QDT+LRK+LQ+IPGVPL++GLRN LFMEQPS +QRQFVKS EE+R+HMSE ERDLLKK+ 
Sbjct: 121 QDTNLRKQLQQIPGVPLIFGLRNTLFMEQPSDVQRQFVKSLEEKRMHMSEAERDLLKKKM 180

Query: 181 KYRVETEETNEDRGLGDQNLETQAMKKRSTS-NELKDKIQFKRKKAKGPNPLSCKKKKEN 240
           KY VE E+TNED  LGDQNL+ Q +KK+    + LKD+ QFKR KAKGPNPLSC KKK  
Sbjct: 181 KYVVEAEKTNEDEDLGDQNLDAQVLKKKKNILSNLKDRPQFKRNKAKGPNPLSCLKKKVK 240

Query: 241 PSQHPVSEKHKKDNDSAAESRTRKRKRSRKAKMPATTM 276
           PS HPVSEK KKD+D  A+ RTRKRKRSRKAK P  T+
Sbjct: 241 PSPHPVSEK-KKDDDDLAQKRTRKRKRSRKAKAPTETV 277

[Close]

BLAST of MC04g1125 vs. ExPASy TrEMBL
Match: A0A6J1JT87 (rRNA-processing protein UTP23 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487635 PE=4 SV=1)

HSP 1 Score: 348 bits (893), Expect = 9.62e-118
Identity = 197/287 (68.64%), Postives = 229/287 (79.79%), Query Frame = 0


Query: 1   MRFKRQKRHRRVVRFYAACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPIKL 60
           MRFK+QKRHR+ VRFY  CFGFR+PFKVLCDGTFVHHLLSN+I+PAD ALAK +GG +K+
Sbjct: 1   MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKV 60

Query: 61  FTTRCVLSELKALGQSYSEAFDAASRLLIARCDHERRKSAEACISDVIGESNAEHFFVAT 120
           FTTRCVL ELKALG SYS+AF+AAS L  ARCDHE RK A  CI +VIG+SNAEHFFVAT
Sbjct: 61  FTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHAVTCIMEVIGKSNAEHFFVAT 120

Query: 121 QDTDLRKKLQEIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKK-- 180
           QDTDL+K+LQEIPGVPL++GLRNALFMEQP+ L+RQFVKSSEE+R H+SE+E +LL+K  
Sbjct: 121 QDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVT 180

Query: 181 RKYRVETEETNEDRGLGDQNLETQAM----KKRSTSNELKDKIQFKRKKAKGPNPLSC-- 240
           +    ETE TNED  L  +N E Q +    KKR   N+LKD+ QFKRKK KGPNPLSC  
Sbjct: 181 KDDEEETEITNEDGDLVGKNSEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLK 240

Query: 241 KKKKENPSQHPVSEKHKKDNDSAAESRTRKRKRSRKAKMPATTMGTP 279
           KKKK +P+QHPVSEK   DN +    RTRKRKR+RK K  A T GTP
Sbjct: 241 KKKKVDPNQHPVSEKKADDNTTK---RTRKRKRARKTKTTAET-GTP 283

[Close]

BLAST of MC04g1125 vs. ExPASy TrEMBL
Match: A0A6J1E579 (rRNA-processing protein UTP23 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430840 PE=4 SV=1)

HSP 1 Score: 347 bits (889), Expect = 3.90e-117
Identity = 195/286 (68.18%), Postives = 227/286 (79.37%), Query Frame = 0


Query: 1   MRFKRQKRHRRVVRFYAACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPIKL 60
           MRFK+QKRHR+ VRFY  CFGFR+PFKVLCDGTFVHHLLSN+I+PAD ALAK +GG +K+
Sbjct: 1   MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKV 60

Query: 61  FTTRCVLSELKALGQSYSEAFDAASRLLIARCDHERRKSAEACISDVIGESNAEHFFVAT 120
           FTTRCVL ELKALG SYS+AF+AAS L  ARCDHE RK A  CI +VIG+SNAEHFFVAT
Sbjct: 61  FTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHAVTCIMEVIGKSNAEHFFVAT 120

Query: 121 QDTDLRKKLQEIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKK-- 180
           QDTDL+K+LQEIPGVPL++GLRNALFMEQP+ L+RQFVKSSEE+R H+SE+E +LL+K  
Sbjct: 121 QDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVT 180

Query: 181 RKYRVETEETNEDRGLGDQNLETQAM----KKRSTSNELKDKIQFKRKKAKGPNPLSC-- 240
           +    ETE TNED  L  +N E Q +    KKR   N+LKD+ QFKRKK KGPNPLSC  
Sbjct: 181 KDDEEETEITNEDGDLVGKNSEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLK 240

Query: 241 KKKKENPSQHPVSEKHKKDNDSAAESRTRKRKRSRKAKMPATTMGT 278
           KKKK +P+QHPVSEK   DN +    RTRKRKR+RK K  A T  T
Sbjct: 241 KKKKVDPNQHPVSEKKADDNTTK---RTRKRKRARKTKTTAETGAT 283

[Close]

BLAST of MC04g1125 vs. ExPASy TrEMBL
Match: A0A6J1JRB3 (rRNA-processing protein UTP23 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487635 PE=4 SV=1)

HSP 1 Score: 346 bits (888), Expect = 5.35e-117
Identity = 196/287 (68.29%), Postives = 227/287 (79.09%), Query Frame = 0


Query: 1   MRFKRQKRHRRVVRFYAACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPIKL 60
           MRFK+QKRHR+ VRFY  CFGFR+PFKVLCDGTFVHHLLSN+I+PAD ALAK +GG +K+
Sbjct: 1   MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKV 60

Query: 61  FTTRCVLSELKALGQSYSEAFDAASRLLIARCDHERRKSAEACISDVIGESNAEHFFVAT 120
           FTTRCVL ELKALG SYS+AF+AAS L  ARCDHE RK A  CI +VIG+SNAEHFFVAT
Sbjct: 61  FTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHAVTCIMEVIGKSNAEHFFVAT 120

Query: 121 QDTDLRKKLQEIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKK-- 180
           QDTDL+K+LQEIPGVPL++GLRNALFMEQP+ L+RQFVKSSEE+R H+SE+E +LL+K  
Sbjct: 121 QDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVT 180

Query: 181 RKYRVETEETNEDRGLGDQNLETQAM----KKRSTSNELKDKIQFKRKKAKGPNPLSC-- 240
           +    ETE TNED  L  +N E Q +    KKR   N+LKD+ QFKRKK KGPNPLSC  
Sbjct: 181 KDDEEETEITNEDGDLVGKNSEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLK 240

Query: 241 KKKKENPSQHPVSEKHKKDNDSAAESRTRKRKRSRKAKMPATTMGTP 279
           KKKK +P+QHPVSEK     D     RTRKRKR+RK K  A T GTP
Sbjct: 241 KKKKVDPNQHPVSEKA----DDNTTKRTRKRKRARKTKTTAET-GTP 282

[Close]

BLAST of MC04g1125 vs. TAIR 10
Match: AT2G34570.1 (PIN domain-like family protein )

HSP 1 Score: 251.1 bits (640), Expect = 1.0e-66
Identity = 140/277 (50.54%), Postives = 191/277 (68.95%), Query Frame = 0


Query: 1   MRFKRQKRHRRVVRFYAACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPIKL 60
           MR KRQK++RR VRF+  C+GFRQP+KVLCDGTFVHHL++N I PAD A+++ +GGP+KL
Sbjct: 1   MRVKRQKKNRRTVRFFTVCYGFRQPYKVLCDGTFVHHLVTNEITPADTAVSELLGGPVKL 60

Query: 61  FTTRCVLSELKALGQSYSEAFDAASRLLIARCDHERRKSAEACISDVIGESNAEHFFVAT 120
           FTTRCV++EL+ LG+ ++E+ +AA  L  A C+HE  K+A+ C+S+VIG  N EHFF+ T
Sbjct: 61  FTTRCVIAELEKLGKDFAESLEAAQTLNTATCEHEEAKTADECLSEVIGVQNTEHFFLGT 120

Query: 121 QDTDLRKKLQEIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKRK 180
           QD + R+KLQ+   VPLV+GLRN L ++QPS  QRQ  K SE +RL M++ E+ LL KR 
Sbjct: 121 QDAEFRRKLQQESIVPLVFGLRNILLIDQPSDFQRQSAKDSENKRLTMTDTEKKLLVKRT 180

Query: 181 YRVETEETNEDRGLGDQNLETQAMKKRSTSNEL--KDKIQFKRKKAKGPNPLSC-KKKKE 240
            ++      E       N E    +  ST N L  KD+ QFKR +AKGPNPLSC KKKKE
Sbjct: 181 AKIIASNRKE---ATIANEEWGMPRVVSTKNGLGVKDRPQFKRNRAKGPNPLSCMKKKKE 240

Query: 241 NPSQHPVSEKH----KKDNDSAAESRTRKRKRSRKAK 271
           NP     ++ +    K+  +  ++++ R RKRS+K K
Sbjct: 241 NPQSKSKADSNSNAQKEKKEGGSDTQKRSRKRSKKGK 274

[Close]

BLAST of MC04g1125 vs. TAIR 10
Match: AT2G46230.1 (PIN domain-like family protein )

HSP 1 Score: 60.1 bits (144), Expect = 3.3e-09
Identity = 37/117 (31.62%), Postives = 62/117 (52.99%), Query Frame = 0


Query: 25  PFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPIKLFTTRCVLSELKALGQSYSEAFDAA 84
           P++VL D  F++  + N+I   +  +   +        T CV++EL+ LGQ Y  A   A
Sbjct: 62  PYRVLVDTNFINFSIQNKI-DLEKGMRDCLYANCTPCITDCVMAELEKLGQKYRVALRIA 121

Query: 85  SRLLIAR--CDHERRKSAEACISDVIGESNAEHFFVATQDTDLRKKLQEIPGVPLVY 140
                 R  C H +   A+ C+ D + +     F VAT D DL++++++IPGVP++Y
Sbjct: 122 KDPHFERLPCIH-KGTYADDCLVDRVTQHKC--FIVATCDRDLKRRIRKIPGVPIMY 174

The following BLAST results are available for this feature:

BLAST of MC04g1125 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9BRU9	5.0e-26	34.07	rRNA-processing protein UTP23 homolog OS=Homo sapiens OX=9606 GN=UTP23 PE=1 SV=2	[more]
Q9CX11	2.5e-25	33.96	rRNA-processing protein UTP23 homolog OS=Mus musculus OX=10090 GN=Utp23 PE=2 SV=...	[more]
Q08DU1	2.7e-24	32.46	rRNA-processing protein UTP23 homolog OS=Bos taurus OX=9913 GN=UTP23 PE=2 SV=1	[more]
O74862	1.2e-19	31.73	rRNA-processing protein utp23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
Q12339	2.9e-18	31.07	rRNA-processing protein UTP23 OS=Saccharomyces cerevisiae (strain ATCC 204508 / ...	[more]

BLAST of MC04g1125 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141733.1	9.62e-189	100.00	rRNA-processing protein UTP23 homolog [Momordica charantia]	[more]
XP_004143766.1	8.21e-128	72.76	rRNA-processing protein UTP23 homolog isoform X1 [Cucumis sativus] >XP_011655273...	[more]
XP_008465424.1	1.13e-127	72.66	PREDICTED: rRNA-processing protein UTP23 homolog [Cucumis melo] >XP_008465433.1 ...	[more]
XP_011655276.1	3.22e-127	72.40	rRNA-processing protein UTP23 homolog isoform X2 [Cucumis sativus]	[more]
KAG7032659.1	4.90e-118	68.55	rRNA-processing protein UTP23-like protein [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of MC04g1125 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CLD6	4.66e-189	100.00	rRNA-processing protein UTP23 homolog OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A1S3CNY6	5.45e-128	72.66	rRNA-processing protein UTP23 homolog OS=Cucumis melo OX=3656 GN=LOC103503039 PE...	[more]
A0A6J1JT87	9.62e-118	68.64	rRNA-processing protein UTP23 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1E579	3.90e-117	68.18	rRNA-processing protein UTP23 homolog isoform X1 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1JRB3	5.35e-117	68.29	rRNA-processing protein UTP23 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of MC04g1125 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34570.1	1.0e-66	50.54	PIN domain-like family protein	[more]
AT2G46230.1	3.3e-09	31.62	PIN domain-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.1010		coord: 1..158 e-value: 7.7E-50 score: 170.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..260
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..279
None	No IPR available	PANTHER	PTHR12416	UNCHARACTERIZED	coord: 1..271
None	No IPR available	PANTHER	PTHR12416:SF3	RRNA-PROCESSING PROTEIN UTP23 HOMOLOG	coord: 1..271
None	No IPR available	CDD	cd08553	PIN_Fcf1-like	coord: 26..148 e-value: 2.30869E-56 score: 175.461
IPR006984	rRNA-processing protein Fcf1/Utp23	PFAM	PF04900	Fcf1	coord: 52..149 e-value: 1.9E-26 score: 92.2
IPR029060	PIN-like domain superfamily	SUPERFAMILY	88723	PIN domain-like	coord: 25..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g1125.1	MC04g1125.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0070181	small ribosomal subunit rRNA binding