Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CACGTGCCTTTGGAGGCCGTGAGGCCCTTACTGCTGGTCGGCAATCGAGCGATGGATGCATGTGTCGTTTCTAACCCGGATTTTGACTTAGAGGCATTCAATCATAATCCAGCGCACAGTAGCTTCGCGCCACTG
mRNA sequence
CACGTGCCTTTGGAGGCCGTGAGGCCCTTACTGCTGGTCGGCAATCGAGCGATGGATGCATGTGTCGTTTCTAACCCGGATTTTGACTTAGAGGCATTCAATCATAATCCAGCGCACAGTAGCTTCGCGCCACTG
Coding sequence (CDS)
CACGTGCCTTTGGAGGCCGTGAGGCCCTTACTGCTGGTCGGCAATCGAGCGATGGATGCATGTGTCGTTTCTAACCCGGATTTTGACTTAGAGGCATTCAATCATAATCCAGCGCACAGTAGCTTCGCGCCACTG
Protein sequence
HVPLEAVRPLLLVGNRAMDACVVSNPDFDLEAFNHNPAHSSFAPL
Homology
BLAST of MC04g0981 vs. NCBI nr
Match:
OPH47798.1 (hypothetical protein B4U81_25600, partial [Vibrio campbellii])
HSP 1 Score: 78.6 bits (192), Expect = 5.65e-17
Identity = 36/45 (80.00%), Postives = 38/45 (84.44%), Query Frame = 0
Query: 1 HVPLEAVRPLLLVGNRAMDACVVSNPDFDLEAFNHNPAHSSFAPL 45
HVPL AVRPLLLVG RA ACV S+PD DLEAF+HNPAH SFAPL
Sbjct: 76 HVPLGAVRPLLLVGKRAAGACVASSPDSDLEAFSHNPAHGSFAPL 120
BLAST of MC04g0981 vs. NCBI nr
Match:
GAV91288.1 (hypothetical protein CFOL_v3_34685, partial [Cephalotus follicularis])
HSP 1 Score: 75.9 bits (185), Expect = 4.15e-16
Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 0
Query: 1 HVPLEAVRPLLLVGNRAMDACVVSNPDFDLEAFNHNPAHSSFAPL 45
HVPL +RPLLLVG RA ACV S+PD DLEAF+HNPAH SFAPL
Sbjct: 58 HVPLGTLRPLLLVGKRAAGACVASSPDSDLEAFSHNPAHGSFAPL 102
BLAST of MC04g0981 vs. NCBI nr
Match:
GAV78408.1 (hypothetical protein CFOL_v3_21876, partial [Cephalotus follicularis])
HSP 1 Score: 73.2 bits (178), Expect = 4.77e-15
Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 0
Query: 1 HVPLEAVRPLLLVGNRAMDACVVSNPDFDLEAFNHNPAHSSFAPL 45
HVPL +RPLLLVG+RA+ C+ S+PD DLEAF+HNP H SFAPL
Sbjct: 58 HVPLGTLRPLLLVGSRAVGTCIASSPDSDLEAFSHNPPHGSFAPL 102
BLAST of MC04g0981 vs. NCBI nr
Match:
KAF7112645.1 (hypothetical protein RHSIM_RhsimUnG0208900 [Rhododendron simsii])
HSP 1 Score: 72.8 bits (177), Expect = 5.68e-15
Identity = 33/45 (73.33%), Postives = 36/45 (80.00%), Query Frame = 0
Query: 1 HVPLEAVRPLLLVGNRAMDACVVSNPDFDLEAFNHNPAHSSFAPL 45
HVPL A PLLLVG RA AC+ S+PD DLEAF+HNPAH SFAPL
Sbjct: 51 HVPLGAKWPLLLVGKRAAGACIASSPDSDLEAFSHNPAHGSFAPL 95
BLAST of MC04g0981 vs. NCBI nr
Match:
KAF7112644.1 (hypothetical protein RHSIM_RhsimUnG0208400 [Rhododendron simsii])
HSP 1 Score: 72.8 bits (177), Expect = 5.06e-14
Identity = 33/45 (73.33%), Postives = 36/45 (80.00%), Query Frame = 0
Query: 1 HVPLEAVRPLLLVGNRAMDACVVSNPDFDLEAFNHNPAHSSFAPL 45
HVPL A PLLLVG RA AC+ S+PD DLEAF+HNPAH SFAPL
Sbjct: 19 HVPLGAKWPLLLVGKRAAGACIASSPDSDLEAFSHNPAHGSFAPL 63
BLAST of MC04g0981 vs. ExPASy TrEMBL
Match:
A0A1Q3DGA9 (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_34685 PE=4 SV=1)
HSP 1 Score: 75.9 bits (185), Expect = 2.01e-16
Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 0
Query: 1 HVPLEAVRPLLLVGNRAMDACVVSNPDFDLEAFNHNPAHSSFAPL 45
HVPL +RPLLLVG RA ACV S+PD DLEAF+HNPAH SFAPL
Sbjct: 58 HVPLGTLRPLLLVGKRAAGACVASSPDSDLEAFSHNPAHGSFAPL 102
BLAST of MC04g0981 vs. ExPASy TrEMBL
Match:
A0A1Q3CE62 (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_21876 PE=4 SV=1)
HSP 1 Score: 73.2 bits (178), Expect = 2.31e-15
Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 0
Query: 1 HVPLEAVRPLLLVGNRAMDACVVSNPDFDLEAFNHNPAHSSFAPL 45
HVPL +RPLLLVG+RA+ C+ S+PD DLEAF+HNP H SFAPL
Sbjct: 58 HVPLGTLRPLLLVGSRAVGTCIASSPDSDLEAFSHNPPHGSFAPL 102
BLAST of MC04g0981 vs. ExPASy TrEMBL
Match:
A0A0V0XEH6 (Uncharacterized protein (Fragment) OS=Trichinella patagoniensis OX=990121 GN=T12_13365 PE=4 SV=1)
HSP 1 Score: 68.2 bits (165), Expect = 4.79e-14
Identity = 32/42 (76.19%), Postives = 34/42 (80.95%), Query Frame = 0
Query: 4 LEAVRPLLLVGNRAMDACVVSNPDFDLEAFNHNPAHSSFAPL 45
L A RPLL VGNRA ACV S+PD DLEAF+HNPAH SFAPL
Sbjct: 1 LGAGRPLLRVGNRAAGACVASSPDSDLEAFSHNPAHGSFAPL 42
BLAST of MC04g0981 vs. ExPASy TrEMBL
Match:
A0A1Q3BLS7 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_12488 PE=4 SV=1)
HSP 1 Score: 69.3 bits (168), Expect = 6.37e-14
Identity = 31/45 (68.89%), Postives = 35/45 (77.78%), Query Frame = 0
Query: 1 HVPLEAVRPLLLVGNRAMDACVVSNPDFDLEAFNHNPAHSSFAPL 45
HVPL +RPLLLVG RA+ AC S+ D DLE F+HNPAH SFAPL
Sbjct: 51 HVPLGTLRPLLLVGKRAVGACFASSLDSDLETFSHNPAHGSFAPL 95
BLAST of MC04g0981 vs. ExPASy TrEMBL
Match:
A0A7C9CPI8 (Uncharacterized protein (Fragment) OS=Opuntia streptacantha OX=393608 PE=4 SV=1)
HSP 1 Score: 68.6 bits (166), Expect = 1.22e-13
Identity = 33/45 (73.33%), Postives = 35/45 (77.78%), Query Frame = 0
Query: 1 HVPLEAVRPLLLVGNRAMDACVVSNPDFDLEAFNHNPAHSSFAPL 45
HVPL A PLL VGNRA A V S+PD DLEAF+HNPAH SFAPL
Sbjct: 57 HVPLGARGPLLRVGNRAAGARVASSPDSDLEAFSHNPAHGSFAPL 101
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| OPH47798.1 | 5.65e-17 | 80.00 | hypothetical protein B4U81_25600, partial [Vibrio campbellii] | [more] |
| GAV91288.1 | 4.15e-16 | 75.56 | hypothetical protein CFOL_v3_34685, partial [Cephalotus follicularis] | [more] |
| GAV78408.1 | 4.77e-15 | 68.89 | hypothetical protein CFOL_v3_21876, partial [Cephalotus follicularis] | [more] |
| KAF7112645.1 | 5.68e-15 | 73.33 | hypothetical protein RHSIM_RhsimUnG0208900 [Rhododendron simsii] | [more] |
| KAF7112644.1 | 5.06e-14 | 73.33 | hypothetical protein RHSIM_RhsimUnG0208400 [Rhododendron simsii] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A1Q3DGA9 | 2.01e-16 | 75.56 | Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3... | [more] |
| A0A1Q3CE62 | 2.31e-15 | 68.89 | Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3... | [more] |
| A0A0V0XEH6 | 4.79e-14 | 76.19 | Uncharacterized protein (Fragment) OS=Trichinella patagoniensis OX=990121 GN=T12... | [more] |
| A0A1Q3BLS7 | 6.37e-14 | 68.89 | Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_12488 PE=4... | [more] |
| A0A7C9CPI8 | 1.22e-13 | 73.33 | Uncharacterized protein (Fragment) OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
