MC04g0609 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: utr5CDSpolypeptideutr3 Hold the cursor over a type above to highlight its positions in the sequence below.CCAAAATCCCCTCAAAACCAACATCCGTAGACACAAACAAAAGCATGGATCACCCAAAGGTCATAAACGCTATTGCACTCATTCTCGCTCTCTCGTTGCTGAGTCTTTCATGTTTCGTTCACTCAAGAACTCTCTCGACCGCTCCATCGCCGGCACCTGTAAGTTCTCTCTTTCCTTAAAGTTTACAAAACCATAAATTTTTGCCAACATGAGCGTAGCTCAGCGATAATTGACATATATCTATCACCAAGAGGTCATGAGTCCTTTCTGAACATATATCGTCATATATTCTAACGTCTAGTTCTTTGAAAGATACACTTGTATATATTTACATTTTCTTTCTTCTCTTTTCAATGACTGCAAGTAGTTTTCCGAGTGATATGCATCTTTCTTAGACCAGTTTGTTACTTTTTTCAATAGGAAGGAGGGGGAATTGGAAGCCATAAAGGAGTGTTTGAAACGAGGCATATGAGGAAGGGCTCATTTCCAGCAGTGTGTGATTCAAAGTGCAACCATTGCAAACCTTGCATACTTGTTCAAGTATCAGTTAGATCCATGGAATTGGCTGAGAATATTGAATACTATCCTCAAGTATGGAGGTGCATGTGTCATCACGATATATTTTTTCCATAAAATAAAGTCCTACGTCAATATCAATGAAAATATCAAAATCTCGATTTCATCATATGTGAATAAAAATGCATGTTGGAGGTGTCGATGAATATTTCTATAAAAAAAAAATTATGAAAAGCAAGAGAAAGTCATACAAATTATTTAAAGTTATATACAGATACATGTATATTTTTTGTTTTTCTAAATATTAGTACTTATATTATAGGGCTCAAGTATTTACAAAATCTGTCCTGGGATTACACATGTTATAAAGTTTAAAGTTAGAAGGTAAATAATATATACATATTGCTATTAATTATCTATATTATATATATATAACTTGGAGAGAATATACTTGTCAATCTCCACTTGAAGGTGCAAAACATGTAATCCTTGTCCCATCTACACACAAAGTTAAATAAATAGAAAAATTATATGGGTA CCAAAATCCCCTCAAAACCAACATCCGTAGACACAAACAAAAGCATGGATCACCCAAAGGTCATAAACGCTATTGCACTCATTCTCGCTCTCTCGTTGCTGAGTCTTTCATGTTTCGTTCACTCAAGAACTCTCTCGACCGCTCCATCGCCGGCACCTGAAGGAGGGGGAATTGGAAGCCATAAAGGAGTGTTTGAAACGAGGCATATGAGGAAGGGCTCATTTCCAGCAGTGTGTGATTCAAAGTGCAACCATTGCAAACCTTGCATACTTGTTCAAGTATCAGTTAGATCCATGGAATTGGCTGAGAATATTGAATACTATCCTCAAGTATGGAGGTGCATGTGTCATCACGATATATTTTTTCCATAAAATAAAGTCCTACGTCAATATCAATGAAAATATCAAAATCTCGATTTCATCATATGTGAATAAAAATGCATGTTGGAGGTGTCGATGAATATTTCTATAAAAAAAAAATTATGAAAAGCAAGAGAAAGTCATACAAATTATTTAAAGTTATATACAGATACATGTATATTTTTTGTTTTTCTAAATATTAGTACTTATATTATAGGGCTCAAGTATTTACAAAATCTGTCCTGGGATTACACATGTTATAAAGTTTAAAGTTAGAAGGTAAATAATATATACATATTGCTATTAATTATCTATATTATATATATATAACTTGGAGAGAATATACTTGTCAATCTCCACTTGAAGGTGCAAAACATGTAATCCTTGTCCCATCTACACACAAAGTTAAATAAATAGAAAAATTATATGGGTA ATGGATCACCCAAAGGTCATAAACGCTATTGCACTCATTCTCGCTCTCTCGTTGCTGAGTCTTTCATGTTTCGTTCACTCAAGAACTCTCTCGACCGCTCCATCGCCGGCACCTGAAGGAGGGGGAATTGGAAGCCATAAAGGAGTGTTTGAAACGAGGCATATGAGGAAGGGCTCATTTCCAGCAGTGTGTGATTCAAAGTGCAACCATTGCAAACCTTGCATACTTGTTCAAGTATCAGTTAGATCCATGGAATTGGCTGAGAATATTGAATACTATCCTCAAGTATGGAGGTGCATGTGTCATCACGATATATTTTTTCCATAA MDHPKVINAIALILALSLLSLSCFVHSRTLSTAPSPAPEGGGIGSHKGVFETRHMRKGSFPAVCDSKCNHCKPCILVQVSVRSMELAENIEYYPQVWRCMCHHDIFFP Homology
BLAST of MC04g0609 vs. ExPASy Swiss-Prot
Match: Q2V3I3 (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 5.8e-07 Identity = 36/105 (34.29%), Postives = 50/105 (47.62%), Query Frame = 0
BLAST of MC04g0609 vs. ExPASy Swiss-Prot
Match: Q9LUH9 (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EPFL5 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 7.6e-07 Identity = 34/106 (32.08%), Postives = 49/106 (46.23%), Query Frame = 0
BLAST of MC04g0609 vs. ExPASy Swiss-Prot
Match: Q1G3V9 (EPIDERMAL PATTERNING FACTOR-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=EPFL8 PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.2e-04 Identity = 22/67 (32.84%), Postives = 32/67 (47.76%), Query Frame = 0
BLAST of MC04g0609 vs. NCBI nr
Match: KAG7011608.1 (EPIDERMAL PATTERNING FACTOR-like protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 164 bits (416), Expect = 2.76e-50 Identity = 79/105 (75.24%), Postives = 85/105 (80.95%), Query Frame = 0
BLAST of MC04g0609 vs. NCBI nr
Match: KAG6571922.1 (EPIDERMAL PATTERNING FACTOR-like protein 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 164 bits (416), Expect = 4.03e-50 Identity = 79/105 (75.24%), Postives = 85/105 (80.95%), Query Frame = 0
BLAST of MC04g0609 vs. NCBI nr
Match: KAE8645843.1 (hypothetical protein Csa_017281 [Cucumis sativus]) HSP 1 Score: 131 bits (329), Expect = 2.23e-37 Identity = 60/76 (78.95%), Postives = 65/76 (85.53%), Query Frame = 0
BLAST of MC04g0609 vs. NCBI nr
Match: KAB1208372.1 (EPIDERMAL PATTERNING FACTOR-like protein 4 [Morella rubra]) HSP 1 Score: 110 bits (275), Expect = 9.16e-29 Identity = 60/114 (52.63%), Postives = 73/114 (64.04%), Query Frame = 0
BLAST of MC04g0609 vs. NCBI nr
Match: XP_021617896.1 (EPIDERMAL PATTERNING FACTOR-like protein 4 [Manihot esculenta] >OAY45413.1 hypothetical protein MANES_07G058600v8 [Manihot esculenta]) HSP 1 Score: 103 bits (256), Expect = 6.85e-26 Identity = 53/101 (52.48%), Postives = 63/101 (62.38%), Query Frame = 0
BLAST of MC04g0609 vs. ExPASy TrEMBL
Match: A0A6A1V6A3 (Epidermal patterning factor-like protein OS=Morella rubra OX=262757 GN=CJ030_MR7G001341 PE=3 SV=1) HSP 1 Score: 110 bits (275), Expect = 4.43e-29 Identity = 60/114 (52.63%), Postives = 73/114 (64.04%), Query Frame = 0
BLAST of MC04g0609 vs. ExPASy TrEMBL
Match: A0A2C9VK80 (Epidermal patterning factor-like protein OS=Manihot esculenta OX=3983 GN=MANES_07G058600 PE=3 SV=1) HSP 1 Score: 103 bits (256), Expect = 3.32e-26 Identity = 53/101 (52.48%), Postives = 63/101 (62.38%), Query Frame = 0
BLAST of MC04g0609 vs. ExPASy TrEMBL
Match: A0A5D2RAU7 (Epidermal patterning factor-like protein OS=Gossypium tomentosum OX=34277 GN=ES332_A03G218100v1 PE=3 SV=1) HSP 1 Score: 101 bits (252), Expect = 1.01e-25 Identity = 56/109 (51.38%), Postives = 72/109 (66.06%), Query Frame = 0
BLAST of MC04g0609 vs. ExPASy TrEMBL
Match: A0A2P5XK54 (Epidermal patterning factor-like protein OS=Gossypium barbadense OX=3634 GN=ES319_A03G198300v1 PE=3 SV=1) HSP 1 Score: 100 bits (250), Expect = 2.03e-25 Identity = 56/109 (51.38%), Postives = 72/109 (66.06%), Query Frame = 0
BLAST of MC04g0609 vs. ExPASy TrEMBL
Match: A0A5D2H9D7 (Epidermal patterning factor-like protein OS=Gossypium darwinii OX=34276 GN=ES288_A03G223300v1 PE=3 SV=1) HSP 1 Score: 100 bits (250), Expect = 2.03e-25 Identity = 56/109 (51.38%), Postives = 72/109 (66.06%), Query Frame = 0
BLAST of MC04g0609 vs. TAIR 10
Match: AT4G14723.1 (BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 55.1 bits (131), Expect = 4.1e-08 Identity = 36/105 (34.29%), Postives = 50/105 (47.62%), Query Frame = 0
BLAST of MC04g0609 vs. TAIR 10
Match: AT3G22820.1 (allergen-related ) HSP 1 Score: 54.7 bits (130), Expect = 5.4e-08 Identity = 34/106 (32.08%), Postives = 49/106 (46.23%), Query Frame = 0
BLAST of MC04g0609 vs. TAIR 10
Match: AT1G80133.1 (unknown protein; LOCATED IN: endomembrane system; Has 154 Blast hits to 154 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 154; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.4 bits (111), Expect = 8.6e-06 Identity = 22/67 (32.84%), Postives = 32/67 (47.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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