MC04g0405 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTACCATATAGGGTAAAGTCATTTTCTCTCGTTGTCATTATTTTATTTTAGATGCATTGGATTACTTGTCTCCCAGATACCTTAACAAAACTCTTTTAGAACTTGCAAAGCTTTTTGATGGTGCTGTTATTTTTGTCGGTAAGCCC CTACCATATAGGGTAAAGTCATTTTCTCTCGTTGTCATTATTTTAGATGCATTGGATTACTTGTCTCCCAGATACCTTAACAAAACTCTTTTAGAACTTGCAAAGCTTTTTGATGGTGCTGTTATTTTTGTCGGTAAGCCC CTACCATATAGGGTAAAGTCATTTTCTCTCGTTGTCATTATTTTAGATGCATTGGATTACTTGTCTCCCAGATACCTTAACAAAACTCTTTTAGAACTTGCAAAGCTTTTTGATGGTGCTGTTATTTTTGTCGGTAAGCCC LPYRVKSFSLVVIILDALDYLSPRYLNKTLLELAKLFDGAVIFVGKP Homology
BLAST of MC04g0405 vs. ExPASy Swiss-Prot
Match: Q9M2Y6 (Probable pectin methylesterase CGR2 OS=Arabidopsis thaliana OX=3702 GN=CGR2 PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 2.1e-09 Identity = 33/48 (68.75%), Postives = 39/48 (81.25%), Query Frame = 0
BLAST of MC04g0405 vs. ExPASy Swiss-Prot
Match: Q0WPN7 (Probable pectin methylesterase CGR3 OS=Arabidopsis thaliana OX=3702 GN=CGR3 PE=2 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 4.6e-09 Identity = 33/48 (68.75%), Postives = 38/48 (79.17%), Query Frame = 0
BLAST of MC04g0405 vs. NCBI nr
Match: MBA0760954.1 (hypothetical protein [Gossypium trilobum]) HSP 1 Score: 67.4 bits (163), Expect = 1.74e-12 Identity = 35/48 (72.92%), Postives = 40/48 (83.33%), Query Frame = 0
BLAST of MC04g0405 vs. NCBI nr
Match: KAE8671485.1 (Pentatricopeptide repeat (PPR) superfamily protein [Hibiscus syriacus]) HSP 1 Score: 65.5 bits (158), Expect = 2.08e-12 Identity = 35/48 (72.92%), Postives = 39/48 (81.25%), Query Frame = 0
BLAST of MC04g0405 vs. NCBI nr
Match: MBA0760953.1 (hypothetical protein [Gossypium trilobum]) HSP 1 Score: 67.4 bits (163), Expect = 2.89e-12 Identity = 35/48 (72.92%), Postives = 40/48 (83.33%), Query Frame = 0
BLAST of MC04g0405 vs. NCBI nr
Match: XP_024923413.1 (uncharacterized protein At3g49720-like, partial [Ziziphus jujuba]) HSP 1 Score: 67.0 bits (162), Expect = 5.82e-12 Identity = 35/48 (72.92%), Postives = 40/48 (83.33%), Query Frame = 0
BLAST of MC04g0405 vs. NCBI nr
Match: TYG75493.1 (hypothetical protein ES288_D03G035800v1 [Gossypium darwinii]) HSP 1 Score: 66.2 bits (160), Expect = 8.09e-12 Identity = 34/48 (70.83%), Postives = 40/48 (83.33%), Query Frame = 0
BLAST of MC04g0405 vs. ExPASy TrEMBL
Match: A0A7J9DK63 (Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_023664 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 8.45e-13 Identity = 35/48 (72.92%), Postives = 40/48 (83.33%), Query Frame = 0
BLAST of MC04g0405 vs. ExPASy TrEMBL
Match: A0A6A2XX73 (Pentatricopeptide repeat (PPR) superfamily protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111947pilonHSYRG00093 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.00e-12 Identity = 35/48 (72.92%), Postives = 39/48 (81.25%), Query Frame = 0
BLAST of MC04g0405 vs. ExPASy TrEMBL
Match: A0A7J9DJQ7 (Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_023664 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.40e-12 Identity = 35/48 (72.92%), Postives = 40/48 (83.33%), Query Frame = 0
BLAST of MC04g0405 vs. ExPASy TrEMBL
Match: A0A2P2JEP8 (Uncharacterized protein At3g49720-like OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.40e-12 Identity = 35/48 (72.92%), Postives = 39/48 (81.25%), Query Frame = 0
BLAST of MC04g0405 vs. ExPASy TrEMBL
Match: A0A6P6FNU3 (uncharacterized protein At3g49720-like OS=Ziziphus jujuba OX=326968 GN=LOC112489316 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.82e-12 Identity = 35/48 (72.92%), Postives = 40/48 (83.33%), Query Frame = 0
BLAST of MC04g0405 vs. TAIR 10
Match: AT3G49720.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 62.0 bits (149), Expect = 1.5e-10 Identity = 33/48 (68.75%), Postives = 39/48 (81.25%), Query Frame = 0
BLAST of MC04g0405 vs. TAIR 10
Match: AT3G49720.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 62.0 bits (149), Expect = 1.5e-10 Identity = 33/48 (68.75%), Postives = 39/48 (81.25%), Query Frame = 0
BLAST of MC04g0405 vs. TAIR 10
Match: AT5G65810.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49720.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 60.8 bits (146), Expect = 3.3e-10 Identity = 33/48 (68.75%), Postives = 38/48 (79.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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