MC04g0259 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g0259
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	ATP-dependent RNA helicase MAK5
Location	MC04: 2021912 .. 2022334 (-)
RNA-Seq Expression	MC04g0259
Synteny	MC04g0259

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATTCTAATCTCAGCTTCTCTGCTCTCTGCCATGGTGTTGTACTCTTCTCTCCTCCCTTTTCTCCACTCTCTCAACCTCTACATCTCTGCAACTATCCATAAAAACTACATCTTTTTGCTCTGCAATGGCCTCCTCGTCTTCATTGTCAGAAATTCCGGCCTCATCGGCGGCTCCGGCGAGGAACAGGGCGGCGGAGGCAAAGTTGAGAGCAAAGTTGAAGATGGAGAAGAGAGGGAAAATGGGTTGGTTGCAGAACAAGAAGAGAGTGAAAAATTGATAACAGAGGATGAAGAACATGAAGAAGAAGAAGAAGAAGAAGATGGGGGTTTGAGCAATGAGGAATTGAACCAAAAATGTGAAGAATTTATTAGGAAAATGAAGGCAGAAATCAAATTTGAATTACAGCAAGTGCTTGTT

mRNA sequence

ATGAAGATTCTAATCTCAGCTTCTCTGCTCTCTGCCATGGTGTTGTACTCTTCTCTCCTCCCTTTTCTCCACTCTCTCAACCTCTACATCTCTGCAACTATCCATAAAAACTACATCTTTTTGCTCTGCAATGGCCTCCTCGTCTTCATTGTCAGAAATTCCGGCCTCATCGGCGGCTCCGGCGAGGAACAGGGCGGCGGAGGCAAAGTTGAGAGCAAAGTTGAAGATGGAGAAGAGAGGGAAAATGGGTTGGTTGCAGAACAAGAAGAGAGTGAAAAATTGATAACAGAGGATGAAGAACATGAAGAAGAAGAAGAAGAAGAAGATGGGGGTTTGAGCAATGAGGAATTGAACCAAAAATGTGAAGAATTTATTAGGAAAATGAAGGCAGAAATCAAATTTGAATTACAGCAAGTGCTTGTT

Coding sequence (CDS)

ATGAAGATTCTAATCTCAGCTTCTCTGCTCTCTGCCATGGTGTTGTACTCTTCTCTCCTCCCTTTTCTCCACTCTCTCAACCTCTACATCTCTGCAACTATCCATAAAAACTACATCTTTTTGCTCTGCAATGGCCTCCTCGTCTTCATTGTCAGAAATTCCGGCCTCATCGGCGGCTCCGGCGAGGAACAGGGCGGCGGAGGCAAAGTTGAGAGCAAAGTTGAAGATGGAGAAGAGAGGGAAAATGGGTTGGTTGCAGAACAAGAAGAGAGTGAAAAATTGATAACAGAGGATGAAGAACATGAAGAAGAAGAAGAAGAAGAAGATGGGGGTTTGAGCAATGAGGAATTGAACCAAAAATGTGAAGAATTTATTAGGAAAATGAAGGCAGAAATCAAATTTGAATTACAGCAAGTGCTTGTT

Protein sequence

MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGSGEEQGGGGKVESKVEDGEERENGLVAEQEESEKLITEDEEHEEEEEEEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLV

Homology

[Close]

BLAST of MC04g0259 vs. NCBI nr
Match: XP_022136122.1 (ATP-dependent RNA helicase MAK5 [Momordica charantia])

HSP 1 Score: 240 bits (613), Expect = 3.15e-79
Identity = 141/143 (98.60%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 1   MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGS 60
           MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGS
Sbjct: 1   MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGS 60

Query: 61  GEEQGGGGKVESKVEDGEERENGLVAEQEESEKLITEDEEHEEEEEEE--DGGLSNEELN 120
           GEEQGGGGKVESKVEDGEERENGLVAEQEESEKLITEDEEHEEEEEEE  DGGLSNEELN
Sbjct: 61  GEEQGGGGKVESKVEDGEERENGLVAEQEESEKLITEDEEHEEEEEEEEEDGGLSNEELN 120

Query: 121 QKCEEFIRKMKAEIKFELQQVLV 141
           QKCEEFIRKMKAEIKFELQQVLV
Sbjct: 121 QKCEEFIRKMKAEIKFELQQVLV 143

[Close]

BLAST of MC04g0259 vs. NCBI nr
Match: XP_038888415.1 (histone H3.v1-like [Benincasa hispida])

HSP 1 Score: 167 bits (423), Expect = 4.50e-50
Identity = 108/159 (67.92%), Postives = 123/159 (77.36%), Query Frame = 0


Query: 1   MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGS 60
           MK++ISASLLSAMV YSSLLPFLHSLNLYIS TIHKNY+FLLCNGLLVFIVRNSGLIG S
Sbjct: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISTTIHKNYMFLLCNGLLVFIVRNSGLIGNS 60

Query: 61  GEEQGGGG------------KVESKVEDGEERENGLVAEQEESEKLITEDEEHEE----- 120
            +EQ G              K+ESKVE  EERENGL+A++EE+E+LIT+DE+ EE     
Sbjct: 61  SDEQSGRNEALGAAMADGNRKIESKVEIEEERENGLIAKEEENEELITKDEDEEERFNFY 120

Query: 121 -EEEEEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLV 141
            EEEEE+    +EELN+KCEEFIRKMK  IKFE QQV V
Sbjct: 121 EEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQVFV 159

[Close]

BLAST of MC04g0259 vs. NCBI nr
Match: XP_022969273.1 (sodium/potassium/calcium exchanger 1-like [Cucurbita maxima])

HSP 1 Score: 166 bits (421), Expect = 1.20e-49
Identity = 113/168 (67.26%), Postives = 127/168 (75.60%), Query Frame = 0


Query: 1   MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGS 60
           MK++ISAS+LSAMV YSSLLPFLHSLNLYISATIHKNY+FLLCNGLLVFIVRNSGLI  S
Sbjct: 1   MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS 60

Query: 61  GEEQ-GGGGK----------------VESKVEDGEERENGLVAEQE-ESEKLITEDE--- 120
           G EQ GG G                 +E KVEDGEERENG +AE+E ESE+L+TE+E   
Sbjct: 61  GREQCGGHGSREAEALGAAMEDSTTIIERKVEDGEERENGFIAEEEQESERLVTEEEQQQ 120

Query: 121 EHEEEEEEED------GGLSNEELNQKCEEFIRKMKAEIKFELQQVLV 141
           EHEEE+EEE       G LSNEEL++K EEFIRKMKA IK E QQVL+
Sbjct: 121 EHEEEQEEEKAEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLI 168

[Close]

BLAST of MC04g0259 vs. NCBI nr
Match: KAG7011863.1 (hypothetical protein SDJN02_26769, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 166 bits (421), Expect = 1.32e-49
Identity = 113/171 (66.08%), Postives = 128/171 (74.85%), Query Frame = 0


Query: 1   MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGS 60
           MK++ISAS+LSAMV YSSLLPFLHSLNLYISATIHKNY+FLLCNGLLVFIVRNSGLI  S
Sbjct: 1   MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS 60

Query: 61  GEEQ-GGGGK----------------VESKVEDGEERENGLVAE--QEESEKLITEDE-- 120
           G EQ GG G                 +E KVEDGEERENG +AE  QEESE+L+TE+E  
Sbjct: 61  GREQCGGHGSREAESPGAAMEDSTTIIERKVEDGEERENGFIAEEEQEESERLVTEEEQQ 120

Query: 121 -EHEEEEEEED--------GGLSNEELNQKCEEFIRKMKAEIKFELQQVLV 141
            EHEE+EE+E+        G LSNEEL++K EEFIRKMKA IK E QQVL+
Sbjct: 121 QEHEEQEEQEEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLI 171

[Close]

BLAST of MC04g0259 vs. NCBI nr
Match: KAG6572225.1 (hypothetical protein SDJN03_28953, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 164 bits (416), Expect = 8.84e-49
Identity = 113/176 (64.20%), Postives = 128/176 (72.73%), Query Frame = 0


Query: 1   MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGS 60
           MK++ISAS+LSAMV YSSLLPFLHSLNLYISATIHKNY+FLLCNGLLVFIVRNSGLI  S
Sbjct: 1   MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS 60

Query: 61  GEEQ-GGGGK----------------VESKVEDGEERENGLVAE--QEESEKLITEDE-- 120
           G EQ GG G                 +E KVEDGEERENG +AE  QEESE+L+TE+E  
Sbjct: 61  GREQCGGHGSREAESPGAAMEDSTTIIERKVEDGEERENGFIAEEEQEESERLVTEEEQQ 120

Query: 121 -EHEEEEEEED-------------GGLSNEELNQKCEEFIRKMKAEIKFELQQVLV 141
            EHEE+EE+E+             G LSNEEL++K EEFIRKMKA IK E QQVL+
Sbjct: 121 QEHEEQEEQEEEEEEEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLI 176

[Close]

BLAST of MC04g0259 vs. ExPASy TrEMBL
Match: A0A6J1C4P4 (ATP-dependent RNA helicase MAK5 OS=Momordica charantia OX=3673 GN=LOC111007892 PE=4 SV=1)

HSP 1 Score: 240 bits (613), Expect = 1.53e-79
Identity = 141/143 (98.60%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 1   MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGS 60
           MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGS
Sbjct: 1   MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGS 60

Query: 61  GEEQGGGGKVESKVEDGEERENGLVAEQEESEKLITEDEEHEEEEEEE--DGGLSNEELN 120
           GEEQGGGGKVESKVEDGEERENGLVAEQEESEKLITEDEEHEEEEEEE  DGGLSNEELN
Sbjct: 61  GEEQGGGGKVESKVEDGEERENGLVAEQEESEKLITEDEEHEEEEEEEEEDGGLSNEELN 120

Query: 121 QKCEEFIRKMKAEIKFELQQVLV 141
           QKCEEFIRKMKAEIKFELQQVLV
Sbjct: 121 QKCEEFIRKMKAEIKFELQQVLV 143

[Close]

BLAST of MC04g0259 vs. ExPASy TrEMBL
Match: A0A6J1I0H9 (sodium/potassium/calcium exchanger 1-like OS=Cucurbita maxima OX=3661 GN=LOC111468328 PE=4 SV=1)

HSP 1 Score: 166 bits (421), Expect = 5.81e-50
Identity = 113/168 (67.26%), Postives = 127/168 (75.60%), Query Frame = 0


Query: 1   MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGS 60
           MK++ISAS+LSAMV YSSLLPFLHSLNLYISATIHKNY+FLLCNGLLVFIVRNSGLI  S
Sbjct: 1   MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS 60

Query: 61  GEEQ-GGGGK----------------VESKVEDGEERENGLVAEQE-ESEKLITEDE--- 120
           G EQ GG G                 +E KVEDGEERENG +AE+E ESE+L+TE+E   
Sbjct: 61  GREQCGGHGSREAEALGAAMEDSTTIIERKVEDGEERENGFIAEEEQESERLVTEEEQQQ 120

Query: 121 EHEEEEEEED------GGLSNEELNQKCEEFIRKMKAEIKFELQQVLV 141
           EHEEE+EEE       G LSNEEL++K EEFIRKMKA IK E QQVL+
Sbjct: 121 EHEEEQEEEKAEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLI 168

[Close]

BLAST of MC04g0259 vs. ExPASy TrEMBL
Match: A0A6J1EJY9 (uncharacterized protein LOC111435260 OS=Cucurbita moschata OX=3662 GN=LOC111435260 PE=4 SV=1)

HSP 1 Score: 164 bits (414), Expect = 4.93e-49
Identity = 103/158 (65.19%), Postives = 121/158 (76.58%), Query Frame = 0


Query: 1   MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGS 60
           MK+LISASLLSAMV YSSLLPFLHS NLYISAT HKNY+FLLCNGLLVFIVRNSGLI  S
Sbjct: 1   MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCS 60

Query: 61  GEEQGGG----------------GKVESKVEDGEERENGLVAEQEESEKLITEDEEHEEE 120
           G+   GG                 K+ESKVED EER NGL+ + EESE+ I ED++++++
Sbjct: 61  GDRHSGGDSRGAEALEASMADGSSKIESKVEDREERGNGLIQKDEESERSIVEDDDNDDD 120

Query: 121 EEEED-GGLSNEELNQKCEEFIRKMKAEIKFELQQVLV 141
           ++EE+ G LS EELN+KCEEFIRKMKA IK E QQ+LV
Sbjct: 121 DDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLV 158

[Close]

BLAST of MC04g0259 vs. ExPASy TrEMBL
Match: A0A0A0K349 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G032240 PE=4 SV=1)

HSP 1 Score: 151 bits (382), Expect = 3.46e-44
Identity = 101/161 (62.73%), Postives = 119/161 (73.91%), Query Frame = 0


Query: 1   MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGS 60
           MK++ISASLLSAMV YSSLLPFLHSLNLYIS+TIHKNY+FLLCNGLLVFIVRNSGLIG +
Sbjct: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT 60

Query: 61  GEEQGGGG-------------KVESKVEDGEERENGLVAEQEESEKLITEDE-------E 120
            +E+  G              K+ESKVE  EER NGLV  +++ E LIT++E        
Sbjct: 61  SDERSSGNEALGAATMADGNRKIESKVEIEEERGNGLVVNEDKIENLITDNEVEEERFMS 120

Query: 121 HEEEEEEEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLV 141
           +EEEEEEE     +EELN+KCEEFIRKMKA IKFE QQ+ +
Sbjct: 121 YEEEEEEE----IDEELNKKCEEFIRKMKAGIKFESQQLFI 157

[Close]

BLAST of MC04g0259 vs. ExPASy TrEMBL
Match: A0A1S3CG16 (gem-associated protein 2-like OS=Cucumis melo OX=3656 GN=LOC103500515 PE=4 SV=1)

HSP 1 Score: 137 bits (344), Expect = 2.08e-38
Identity = 95/158 (60.13%), Postives = 107/158 (67.72%), Query Frame = 0


Query: 13  MVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGSGEEQG------- 72
           MV YSSLLPFLHSLNLYIS+TIHKNY+FLLCNGLLVFIVRNSGLIG +  EQ        
Sbjct: 1   MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTCNEQSSRNEALG 60

Query: 73  ------GGGKVESKVEDG--EERENGLVAEQEESEKLIT--------------EDEEHEE 132
                 G  K+ESKVE    EER NGLV  +E+ E LIT              E+EE EE
Sbjct: 61  AVTMADGNRKIESKVEVEVEEERRNGLVVNEEKFENLITDNEDEEERFISYEEEEEEEEE 120

Query: 133 EEEEEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLV 141
           EEEEE+    +EELN+KCEEFIRKMKA IKFE QQ+ +
Sbjct: 121 EEEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFI 158

[Close]

BLAST of MC04g0259 vs. TAIR 10
Match: AT2G04495.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 2.3e-06
Identity = 64/184 (34.78%), Postives = 90/184 (48.91%), Query Frame = 0


Query: 2   KILISASLLSAMVLYSSLLPF----LHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLI 61
           KI+  AS+ S ++ YSSL+      LH L++Y S  + K Y+FLLCNG++ FI+   G  
Sbjct: 18  KIIALASIFSFILSYSSLISSLQQRLHLLSMY-SNLVDKKYMFLLCNGIVGFIL---GSF 77

Query: 62  GGSGEEQGGGGKV---------------ESKV--------------EDGEERENGLVA-- 121
            G+ E    G  +               E+K+              E+ EE E G V   
Sbjct: 78  HGNSESLSQGKAINIIEQTKEVGIKDLKETKLKKVVALLEEKSVSKEEEEEEEGGRVVLF 137

Query: 122 ---EQEESEKLITEDEE-------------HEEEEEEEDGGLSNEELNQKCEEFIRKMKA 135
              E+EE   ++  DEE             H ++EE  D  LS E+LN+KCE+FIRKMKA
Sbjct: 138 RGIEEEEVSLVVEVDEEILVQDLAIIRVDDHHDDEEINDSLLSVEDLNKKCEDFIRKMKA 197

[Close]

BLAST of MC04g0259 vs. TAIR 10
Match: AT2G04515.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04495.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 1.5e-05
Identity = 58/178 (32.58%), Postives = 89/178 (50.00%), Query Frame = 0


Query: 2   KILISASLLSAMVLYSSLLPF----LHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLI 61
           KI+  AS+ S ++ YSSL+      LH L +Y S  + K Y+FLLCNG++ FI+   G  
Sbjct: 18  KIIAFASIFSFILSYSSLISSLQQRLHLLAMY-SNLVDKKYMFLLCNGIVGFIL---GSF 77

Query: 62  GGSGEEQGGGGKVE------------------------------SKVEDG-------EER 121
            G+ +    G  +                               SK E+G       EE 
Sbjct: 78  HGNSDSLSHGKAINIVEQTKEVGIKDLKETKVNKVVALLEESNVSKEEEGRVVLSREEEE 137

Query: 122 ENGLVAEQEE----SEKLITEDEEHEEEEEEEDGGLSNEELNQKCEEFIRKMKAEIKF 135
           E  LV +++E     +  IT  ++H++++   D  LS+E+LN+KCE+FIRKMKAEI++
Sbjct: 138 EVALVVKEDEGILVQDLSITRLDDHDDDDAINDSLLSSEDLNKKCEDFIRKMKAEIRY 191

The following BLAST results are available for this feature:

BLAST of MC04g0259 vs.


Match Name	E-value	Identity	Description

BLAST of MC04g0259 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136122.1	3.15e-79	98.60	ATP-dependent RNA helicase MAK5 [Momordica charantia]	[more]
XP_038888415.1	4.50e-50	67.92	histone H3.v1-like [Benincasa hispida]	[more]
XP_022969273.1	1.20e-49	67.26	sodium/potassium/calcium exchanger 1-like [Cucurbita maxima]	[more]
KAG7011863.1	1.32e-49	66.08	hypothetical protein SDJN02_26769, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6572225.1	8.84e-49	64.20	hypothetical protein SDJN03_28953, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MC04g0259 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C4P4	1.53e-79	98.60	ATP-dependent RNA helicase MAK5 OS=Momordica charantia OX=3673 GN=LOC111007892 P...	[more]
A0A6J1I0H9	5.81e-50	67.26	sodium/potassium/calcium exchanger 1-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1EJY9	4.93e-49	65.19	uncharacterized protein LOC111435260 OS=Cucurbita moschata OX=3662 GN=LOC1114352...	[more]
A0A0A0K349	3.46e-44	62.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G032240 PE=4 SV=1	[more]
A0A1S3CG16	2.08e-38	60.13	gem-associated protein 2-like OS=Cucumis melo OX=3656 GN=LOC103500515 PE=4 SV=1	[more]

BLAST of MC04g0259 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04495.1	2.3e-06	34.78	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G04515.1	1.5e-05	32.58	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 84..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..117
None	No IPR available	PANTHER	PTHR34947:SF3	TRANSMEMBRANE PROTEIN	coord: 74..140
None	No IPR available	PANTHER	PTHR34947	TRANSMEMBRANE PROTEIN	coord: 74..140
None	No IPR available	PANTHER	PTHR34947:SF3	TRANSMEMBRANE PROTEIN	coord: 1..65
None	No IPR available	PANTHER	PTHR34947	TRANSMEMBRANE PROTEIN	coord: 1..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g0259.1	MC04g0259.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004386	helicase activity