MC04g0239 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: utr5CDSpolypeptideutr3 Hold the cursor over a type above to highlight its positions in the sequence below.GGTAATTAAAAAGAAAGAAAGAAAAATGGAGAAACTCCCATTGTTCTCGAGAAGCGGCGGCAGGGTTTAGCATTTGAATGCCCTAAATCTTGAACGGAAGTCTGTTCATCGTGGCTGGCTCTGGACAATTTTTCGCCGCGTTCTCAGATTAACCGATGGCTTCCTCCGCCGCCAGGGCCATTTTCCGATCCTGCTCCGCCTCAGGTTTCAAGGCAACCTCTCGTCTGGCCACCGGAGCCAGAGCAGCCCCAGCTCGTTCACCATTTCGCATTTCGACTAAACCAAGTTTCTCTCAATGTGCTGTAAGGTAATTTGCTCAAAAGCATCGGATTTCGACTCTTCCGAGTATACAAGCATCGACTGAGGATCGAGAATAGGGCACGCACTTGTGCCAACATTGAATTGGAAACTTCTGTTGAAATGAGTAGAAAAATAAGCTAATTGTTCCGTTTTTTATGTTTTTTTTTCTTCTTCCGATGAAGGATTCCTGTGGAAATGAGCTTCTGTGTGGAGTCGATGCTTCCGTTCCATTCGGCTACTTCTTCGGCATTGATGACTTCAATGCTTTCTGTCTCTCCACGTAGTTATGGTTGGCTTTCAGAAGGTACTTTCAGTCTCTTCTTGTTCTTCCAGTAGTTCCTCGGGATCGGACTAGGTTATGGGCTAAGAACATATGTTTTCGTGTTCTGAAACTTTGCTAGGGTGAATTTTACTTCTTCAATGTTCTTGTTATACTGATAGGTTATTCTTTGGGCTTCTGATTTTTGTTGGCGGAAAATTGAATGTGCTGTGTTCGTTGAACAGCTTTATAATTTACTTGGATTGCCTTTGTGATGTACAACACAATGGAGGATAACATGTGATCTACACACCTGACCCTTTAAATTTGGATCTTATAGTGCAGGATGAAAAAGAGGGGGGAATGTAGTGAAAGGGAGTGTATAACTATATGGAAGAACCAAGGGGTTAGCTTTTATAATTCATTCATGATTCAATCACGATTCACAATTTCCTAAAACTGTTTGAAATCTTAAATAGAAAACTATTTTGAAAACAATTTTCCAAATAGTCTCCGACTGATTCAGCTCAAATGTCCTCGTTGAACCAATCCCAGTATTTTGGGCCAAGTATATTTCCCAACTGCTTTCTTGCTCTTTTGGCTAGATTGGGCAAATATCTTATCTTGCCCTTTTTTTGCTACTTTTTTCATATCAACGATGTTTAGCTTATTGTCTTAAGATAGCGATTAAATGCTGCATTATGAACTAGGATCCAACTTTGCCAAAGCTAAAGAAACAATTGGTAATAAATGGCTTTCATCCCACTGTAAGTTATGAATTTGTTGTTCTTGTCATGCTTGCATGTTACACGGACACGAATATCTCATCCACGTACTTGATCTTAAATATGAGGTTACTAATTGTAGTGTTTGATCAGTATTCAATGATGATGTGTGATAAATGGTCGAGGGGATTCCAAGAAAGTTTTGTATGCAGAGTTACACACTGTGACAGTGCCCGCTGATAAATTAGATGAGCTGATGCACAGGGATTTGGTTTTCCATGAGCTGACTCAGTCAAGTTTGCATATCTTTAATTCTTAACTTGTGTAACTATGGACTACTAGAATGTATAGGAAGATCTTACAGTAGACAGACATTTGAGTTTTATCTGAAAATGAAGGCTTAGAACCATTATGTTGAATTCCTTTATAGAGTTATCTTGCAATCGTGAAATAAAAATGCTTACTGAGGTAAGACTTGGAGGATTCTTCTCTAGCAGTCTTTATATTATCTTGTATGTTACTCTATCATTGCTCAGGCAATGTAGGTACTTCATATCTTACCACTTTAAAAGTTGTTATATACTAATATTAATCATATGAACTCGGAAAGATTTATCAAAGTTGAGCTATATGCAAGTTTGCATTCTAAGATAAAGTTTCTTGTTATAATGTAAATTCAGTACACATTATTATTGCGTCAAAGTTAAATATCACAATTGTTTTTTCACCATAAATTAAGCTAACAGAACAAATATATGCAGTGATAAAACCCTCTATTTACTTTTCCAATTGATACGATGAGAAAGTAGGACTTGCACTTCCCTTTCCAGATCCAAATTATAGTCCCAGCAATAATCAGCTAATATTACCCTTTCAGCAAGATTTGTGTTGCTATATAAAACTGTATCCCAGTTAATAGCAGCAGTCCTCCACCACACAATAGAAAGTAAATCCATGATAAATCAACATCGCATTATTTGAAGTCACTCTTCAACGTTAACTAATTCATATTCAACCAGAGAGAGATTGTTGTCCTCTTTAACCTCAAAGTTAGCTGGTTCGGCAACTTCAATTCGTCCCCATTTATCAACTGCTAACCTCATCGAGCCTTTAAACATGTCAATCTTTGCATTCCGCAGGGTCACGGTGTTACCTGGCTTCATGATATCAACTGCAAAAATTACGACCATTTGTTTAGACAACAAAACATTAGAAGCATTGAACTTGGGAGGGGGAATATAACAGTAAAACTGGAACATATAGATGATAGTGAACGGGTTGTTCGCCATCCTCTTTCCACCATAACCCACAAAGGATTGAAATAGGTTCTTAATACCAAGCAGATACCAAAAGCATGAAATAAAGAAACGGCTATGCACTTGTAGTCTTGTACTAACAACAGATTTTAAGTCAAAAGCAACATTAAGGTACGAGACATAAAGGAACAAAGCATTGTCCACACCCACATGATTAACAATTTATTAATCCACTATCTCAAAGCTCCTTGAATTACAAGAGATGAACAAAAATGAGCTCCATCTTGACCAATAACATCCCCCGTACCTCCGGGAGCTCGAGAACTCGTTTCGAACTTATTTTGAACAACAGTCATACACATGATCTTCCTCCATAGATTAAAGTCTTCTGCCCAAAAAGTATTTCTATTTCGAATTCAAACCTTATTAATTCCATTTTGAAGTTTTCTTGAATTCCATCGATTTACTGTTATACATCGGAACCAAGCTCTGATACCACTCGTTGTTGTGCAATTATCTCAACACCCAATTTCGATATATATAAAGTAAGAAAACATAACCATTCAAAAACAGATGAAAGGAACAAAAGATTCAGGGTAATTCAGCACAGCAGAGTCCTCGAGCTTAGATAATTATTGTTGAGAGATTTCTTTGATGGGTAATTTTTTGCAATACCCCCTAAAGGGAATTTTCAAATATCAACGAAAAAGTTTCTATTTTCGAGTTAAAAAACAACCTGCAGAGAAGAATACATAATTCAGCGGAAAAGAGATGAAATTCACAAACGAAAGAGATAACTCACTGTTCCAAAAATTCTCAATCACTTCAAACATTCAAATAGAAAGGAAGAGACCACAATATAAGAGCCACATGTTCTAAAAAATATCCAAGGAAAAGGAGGCTAATAGCAACCATACAGAAACATTTCAGCAAGCATGTAGGAGCATCTAACAGATACAGCCCCGTAAGATGGAGAAAAATTCGACTCGCAAACAATTCAAGGGCTGCACAGACACGTACCTTGGTCATTTCGAGCTGTGAAGACTATGGAACCAGTTTCATCACCAACAAGACATTCAGAGATACGAGTTAATTGCTGAGGGCGAGCCGTGAGCATCGCGGATCGTCCACCTTTATTGACCATCTTCACATTTTTGGAGCTCACCACCTTGACGATGAGAGTATGGCCGCTCGTACCAGGCTTAAGCTCTTCTACTTTTATGAAGACCGGCTTCCTCTTTGCCGGGGCATTGACTGCTGCCGTCGCCATGGAAATTGAAGTAACAGAACGAAACCCTGTTGCCGAT GGTAATTAAAAAGAAAGAAAGAAAAATGGAGAAACTCCCATTGTTCTCGAGAAGCGGCGGCAGGGTTTAGCATTTGAATGCCCTAAATCTTGAACGGAAGTCTGTTCATCGTGGCTGGCTCTGGACAATTTTTCGCCGCGTTCTCAGATTAACCGATGGCTTCCTCCGCCGCCAGGGCCATTTTCCGATCCTGCTCCGCCTCAGGTTTCAAGGCAACCTCTCGTCTGGCCACCGGAGCCAGAGCAGCCCCAGCTCGTTCACCATTTCGCATTTCGACTAAACCAAGTTTCTCTCAATGTGCTGTAAGGATTCCTGTGGAAATGAGCTTCTGTGTGGAGTCGATGCTTCCGTTCCATTCGGCTACTTCTTCGGCATTGATGACTTCAATGCTTTCTGTCTCTCCACGTAGTTATGGTTGGCTTTCAGAAGGTACTTTCAGTCTCTTCTTGTTCTTCCAGTAGTTCCTCGGGATCGGACTAGGTTATGGGCTAAGAACATATGTTTTCGTGTTCTGAAACTTTGCTAGGGTGAATTTTACTTCTTCAATGTTCTTGTTATACTGATAGGTTATTCTTTGGGCTTCTGATTTTTGTTGGCGGAAAATTGAATGTGCTGTGTTCGTTGAACAGCTTTATAATTTACTTGGATTGCCTTTGTGATGTACAACACAATGGAGGATAACATGTGATCTACACACCTGACCCTTTAAATTTGGATCTTATAGTGCAGGATGAAAAAGAGGGGGGAATGTAGTGAAAGGGAGTGTATAACTATATGGAAGAACCAAGGGGTTAGCTTTTATAATTCATTCATGATTCAATCACGATTCACAATTTCCTAAAACTGTTTGAAATCTTAAATAGAAAACTATTTTGAAAACAATTTTCCAAATAGTCTCCGACTGATTCAGCTCAAATGTCCTCGTTGAACCAATCCCAGTATTTTGGGCCAAGTATATTTCCCAACTGCTTTCTTGCTCTTTTGGCTAGATTGGGCAAATATCTTATCTTGCCCTTTTTTTGCTACTTTTTTCATATCAACGATGTTTAGCTTATTGTCTTAAGATAGCGATTAAATGCTGCATTATGAACTAGGATCCAACTTTGCCAAAGCTAAAGAAACAATTGGTAATAAATGGCTTTCATCCCACTGTAAGTTATGAATTTGTTGTTCTTGTCATGCTTGCATGTTACACGGACACGAATATCTCATCCACGTACTTGATCTTAAATATGAGGTTACTAATTGTAGTGTTTGATCAGTATTCAATGATGATGTGTGATAAATGGTCGAGGGGATTCCAAGAAAGTTTTGTATGCAGAGTTACACACTGTGACAGTGCCCGCTGATAAATTAGATGAGCTGATGCACAGGGATTTGGTTTTCCATGAGCTGACTCAGTCAAGTTTGCATATCTTTAATTCTTAACTTGTGTAACTATGGACTACTAGAATGTATAGGAAGATCTTACAGTAGACAGACATTTGAGTTTTATCTGAAAATGAAGGCTTAGAACCATTATGTTGAATTCCTTTATAGAGTTATCTTGCAATCGTGAAATAAAAATGCTTACTGAGGTAAGACTTGGAGGATTCTTCTCTAGCAGTCTTTATATTATCTTGTATGTTACTCTATCATTGCTCAGGCAATGTAGGTACTTCATATCTTACCACTTTAAAAGTTGTTATATACTAATATTAATCATATGAACTCGGAAAGATTTATCAAAGTTGAGCTATATGCAAGTTTGCATTCTAAGATAAAGTTTCTTGTTATAATGTAAATTCAGTACACATTATTATTGCGTCAAAGTTAAATATCACAATTGTTTTTTCACCATAAATTAAGCTAACAGAACAAATATATGCAGTGATAAAACCCTCTATTTACTTTTCCAATTGATACGATGAGAAAGTAGGACTTGCACTTCCCTTTCCAGATCCAAATTATAGTCCCAGCAATAATCAGCTAATATTACCCTTTCAGCAAGATTTGTGTTGCTATATAAAACTGTATCCCAGTTAATAGCAGCAGTCCTCCACCACACAATAGAAAGTAAATCCATGATAAATCAACATCGCATTATTTGAAGTCACTCTTCAACGTTAACTAATTCATATTCAACCAGAGAGAGATTGTTGTCCTCTTTAACCTCAAAGTTAGCTGGTTCGGCAACTTCAATTCGTCCCCATTTATCAACTGCTAACCTCATCGAGCCTTTAAACATGTCAATCTTTGCATTCCGCAGGGTCACGGTGTTACCTGGCTTCATGATATCAACTGCAAAAATTACGACCATTTGTTTAGACAACAAAACATTAGAAGCATTGAACTTGGGAGGGGGAATATAACAGTAAAACTGGAACATATAGATGATAGTGAACGGGTTGTTCGCCATCCTCTTTCCACCATAACCCACAAAGGATTGAAATAGGTTCTTAATACCAAGCAGATACCAAAAGCATGAAATAAAGAAACGGCTATGCACTTGTAGTCTTGTACTAACAACAGATTTTAAGTCAAAAGCAACATTAAGGTACGAGACATAAAGGAACAAAGCATTGTCCACACCCACATGATTAACAATTTATTAATCCACTATCTCAAAGCTCCTTGAATTACAAGAGATGAACAAAAATGAGCTCCATCTTGACCAATAACATCCCCCGTACCTCCGGGAGCTCGAGAACTCGTTTCGAACTTATTTTGAACAACAGTCATACACATGATCTTCCTCCATAGATTAAAGTCTTCTGCCCAAAAAGTATTTCTATTTCGAATTCAAACCTTATTAATTCCATTTTGAAGTTTTCTTGAATTCCATCGATTTACTGTTATACATCGGAACCAAGCTCTGATACCACTCGTTGTTGTGCAATTATCTCAACACCCAATTTCGATATATATAAAGTAAGAAAACATAACCATTCAAAAACAGATGAAAGGAACAAAAGATTCAGGGTAATTCAGCACAGCAGAGTCCTCGAGCTTAGATAATTATTGTTGAGAGATTTCTTTGATGGGTAATTTTTTGCAATACCCCCTAAAGGGAATTTTCAAATATCAACGAAAAAGTTTCTATTTTCGAGTTAAAAAACAACCTGCAGAGAAGAATACATAATTCAGCGGAAAAGAGATGAAATTCACAAACGAAAGAGATAACTCACTGTTCCAAAAATTCTCAATCACTTCAAACATTCAAATAGAAAGGAAGAGACCACAATATAAGAGCCACATGTTCTAAAAAATATCCAAGGAAAAGGAGGCTAATAGCAACCATACAGAAACATTTCAGCAAGCATGTAGGAGCATCTAACAGATACAGCCCCGTAAGATGGAGAAAAATTCGACTCGCAAACAATTCAAGGGCTGCACAGACACGTACCTTGGTCATTTCGAGCTGTGAAGACTATGGAACCAGTTTCATCACCAACAAGACATTCAGAGATACGAGTTAATTGCTGAGGGCGAGCCGTGAGCATCGCGGATCGTCCACCTTTATTGACCATCTTCACATTTTTGGAGCTCACCACCTTGACGATGAGAGTATGGCCGCTCGTACCAGGCTTAAGCTCTTCTACTTTTATGAAGACCGGCTTCCTCTTTGCCGGGGCATTGACTGCTGCCGTCGCCATGGAAATTGAAGTAACAGAACGAAACCCTGTTGCCGAT ATGGCTTCCTCCGCCGCCAGGGCCATTTTCCGATCCTGCTCCGCCTCAGGTTTCAAGGCAACCTCTCGTCTGGCCACCGGAGCCAGAGCAGCCCCAGCTCGTTCACCATTTCGCATTTCGACTAAACCAAGTTTCTCTCAATGTGCTGTAAGGATTCCTGTGGAAATGAGCTTCTGTGTGGAGTCGATGCTTCCGTTCCATTCGGCTACTTCTTCGGCATTGATGACTTCAATGCTTTCTGTCTCTCCACGTAGTTATGGTTGGCTTTCAGAAGGTACTTTCAGTCTCTTCTTGTTCTTCCAGTAG MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSPRSYGWLSEGTFSLFLFFQ Homology
BLAST of MC04g0239 vs. ExPASy Swiss-Prot
Match: Q93ZJ3 (Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD6 PE=3 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.9e-12 Identity = 45/89 (50.56%), Postives = 64/89 (71.91%), Query Frame = 0
BLAST of MC04g0239 vs. NCBI nr
Match: XP_022136010.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Momordica charantia]) HSP 1 Score: 174 bits (441), Expect = 3.75e-54 Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of MC04g0239 vs. NCBI nr
Match: XP_022136012.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 [Momordica charantia]) HSP 1 Score: 171 bits (434), Expect = 2.66e-53 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of MC04g0239 vs. NCBI nr
Match: XP_022136011.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Momordica charantia]) HSP 1 Score: 171 bits (434), Expect = 2.92e-53 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of MC04g0239 vs. NCBI nr
Match: TYK15251.1 (protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]) HSP 1 Score: 133 bits (334), Expect = 5.96e-38 Identity = 75/100 (75.00%), Postives = 81/100 (81.00%), Query Frame = 0
BLAST of MC04g0239 vs. NCBI nr
Match: XP_038887457.1 (protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X3 [Benincasa hispida]) HSP 1 Score: 126 bits (317), Expect = 1.62e-35 Identity = 71/92 (77.17%), Postives = 77/92 (83.70%), Query Frame = 0
BLAST of MC04g0239 vs. ExPASy TrEMBL
Match: A0A6J1C2N3 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007816 PE=4 SV=1) HSP 1 Score: 174 bits (441), Expect = 1.82e-54 Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of MC04g0239 vs. ExPASy TrEMBL
Match: A0A6J1C4D4 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111007816 PE=4 SV=1) HSP 1 Score: 171 bits (434), Expect = 1.29e-53 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of MC04g0239 vs. ExPASy TrEMBL
Match: A0A6J1C2B4 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007816 PE=4 SV=1) HSP 1 Score: 171 bits (434), Expect = 1.41e-53 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of MC04g0239 vs. ExPASy TrEMBL
Match: A0A5D3CTR8 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00250 PE=4 SV=1) HSP 1 Score: 133 bits (334), Expect = 2.88e-38 Identity = 75/100 (75.00%), Postives = 81/100 (81.00%), Query Frame = 0
BLAST of MC04g0239 vs. ExPASy TrEMBL
Match: A0A5A7TDD1 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G003170 PE=4 SV=1) HSP 1 Score: 126 bits (317), Expect = 8.82e-36 Identity = 71/94 (75.53%), Postives = 77/94 (81.91%), Query Frame = 0
BLAST of MC04g0239 vs. TAIR 10
Match: AT2G20585.3 (nuclear fusion defective 6 ) HSP 1 Score: 75.5 bits (184), Expect = 2.8e-14 Identity = 46/90 (51.11%), Postives = 65/90 (72.22%), Query Frame = 0
BLAST of MC04g0239 vs. TAIR 10
Match: AT2G20585.1 (nuclear fusion defective 6 ) HSP 1 Score: 73.2 bits (178), Expect = 1.4e-13 Identity = 45/89 (50.56%), Postives = 64/89 (71.91%), Query Frame = 0
BLAST of MC04g0239 vs. TAIR 10
Match: AT2G20585.2 (nuclear fusion defective 6 ) HSP 1 Score: 73.2 bits (178), Expect = 1.4e-13 Identity = 45/89 (50.56%), Postives = 64/89 (71.91%), Query Frame = 0
BLAST of MC04g0239 vs. TAIR 10
Match: AT1G28395.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 67.4 bits (163), Expect = 7.5e-12 Identity = 41/91 (45.05%), Postives = 59/91 (64.84%), Query Frame = 0
BLAST of MC04g0239 vs. TAIR 10
Match: AT1G28395.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 67.4 bits (163), Expect = 7.5e-12 Identity = 41/91 (45.05%), Postives = 59/91 (64.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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