MC04g0239 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC04g0239
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
LocationMC04: 1867093 .. 1870939 (+)
RNA-Seq ExpressionMC04g0239
SyntenyMC04g0239
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTAATTAAAAAGAAAGAAAGAAAAATGGAGAAACTCCCATTGTTCTCGAGAAGCGGCGGCAGGGTTTAGCATTTGAATGCCCTAAATCTTGAACGGAAGTCTGTTCATCGTGGCTGGCTCTGGACAATTTTTCGCCGCGTTCTCAGATTAACCGATGGCTTCCTCCGCCGCCAGGGCCATTTTCCGATCCTGCTCCGCCTCAGGTTTCAAGGCAACCTCTCGTCTGGCCACCGGAGCCAGAGCAGCCCCAGCTCGTTCACCATTTCGCATTTCGACTAAACCAAGTTTCTCTCAATGTGCTGTAAGGTAATTTGCTCAAAAGCATCGGATTTCGACTCTTCCGAGTATACAAGCATCGACTGAGGATCGAGAATAGGGCACGCACTTGTGCCAACATTGAATTGGAAACTTCTGTTGAAATGAGTAGAAAAATAAGCTAATTGTTCCGTTTTTTATGTTTTTTTTTCTTCTTCCGATGAAGGATTCCTGTGGAAATGAGCTTCTGTGTGGAGTCGATGCTTCCGTTCCATTCGGCTACTTCTTCGGCATTGATGACTTCAATGCTTTCTGTCTCTCCACGTAGTTATGGTTGGCTTTCAGAAGGTACTTTCAGTCTCTTCTTGTTCTTCCAGTAGTTCCTCGGGATCGGACTAGGTTATGGGCTAAGAACATATGTTTTCGTGTTCTGAAACTTTGCTAGGGTGAATTTTACTTCTTCAATGTTCTTGTTATACTGATAGGTTATTCTTTGGGCTTCTGATTTTTGTTGGCGGAAAATTGAATGTGCTGTGTTCGTTGAACAGCTTTATAATTTACTTGGATTGCCTTTGTGATGTACAACACAATGGAGGATAACATGTGATCTACACACCTGACCCTTTAAATTTGGATCTTATAGTGCAGGATGAAAAAGAGGGGGGAATGTAGTGAAAGGGAGTGTATAACTATATGGAAGAACCAAGGGGTTAGCTTTTATAATTCATTCATGATTCAATCACGATTCACAATTTCCTAAAACTGTTTGAAATCTTAAATAGAAAACTATTTTGAAAACAATTTTCCAAATAGTCTCCGACTGATTCAGCTCAAATGTCCTCGTTGAACCAATCCCAGTATTTTGGGCCAAGTATATTTCCCAACTGCTTTCTTGCTCTTTTGGCTAGATTGGGCAAATATCTTATCTTGCCCTTTTTTTGCTACTTTTTTCATATCAACGATGTTTAGCTTATTGTCTTAAGATAGCGATTAAATGCTGCATTATGAACTAGGATCCAACTTTGCCAAAGCTAAAGAAACAATTGGTAATAAATGGCTTTCATCCCACTGTAAGTTATGAATTTGTTGTTCTTGTCATGCTTGCATGTTACACGGACACGAATATCTCATCCACGTACTTGATCTTAAATATGAGGTTACTAATTGTAGTGTTTGATCAGTATTCAATGATGATGTGTGATAAATGGTCGAGGGGATTCCAAGAAAGTTTTGTATGCAGAGTTACACACTGTGACAGTGCCCGCTGATAAATTAGATGAGCTGATGCACAGGGATTTGGTTTTCCATGAGCTGACTCAGTCAAGTTTGCATATCTTTAATTCTTAACTTGTGTAACTATGGACTACTAGAATGTATAGGAAGATCTTACAGTAGACAGACATTTGAGTTTTATCTGAAAATGAAGGCTTAGAACCATTATGTTGAATTCCTTTATAGAGTTATCTTGCAATCGTGAAATAAAAATGCTTACTGAGGTAAGACTTGGAGGATTCTTCTCTAGCAGTCTTTATATTATCTTGTATGTTACTCTATCATTGCTCAGGCAATGTAGGTACTTCATATCTTACCACTTTAAAAGTTGTTATATACTAATATTAATCATATGAACTCGGAAAGATTTATCAAAGTTGAGCTATATGCAAGTTTGCATTCTAAGATAAAGTTTCTTGTTATAATGTAAATTCAGTACACATTATTATTGCGTCAAAGTTAAATATCACAATTGTTTTTTCACCATAAATTAAGCTAACAGAACAAATATATGCAGTGATAAAACCCTCTATTTACTTTTCCAATTGATACGATGAGAAAGTAGGACTTGCACTTCCCTTTCCAGATCCAAATTATAGTCCCAGCAATAATCAGCTAATATTACCCTTTCAGCAAGATTTGTGTTGCTATATAAAACTGTATCCCAGTTAATAGCAGCAGTCCTCCACCACACAATAGAAAGTAAATCCATGATAAATCAACATCGCATTATTTGAAGTCACTCTTCAACGTTAACTAATTCATATTCAACCAGAGAGAGATTGTTGTCCTCTTTAACCTCAAAGTTAGCTGGTTCGGCAACTTCAATTCGTCCCCATTTATCAACTGCTAACCTCATCGAGCCTTTAAACATGTCAATCTTTGCATTCCGCAGGGTCACGGTGTTACCTGGCTTCATGATATCAACTGCAAAAATTACGACCATTTGTTTAGACAACAAAACATTAGAAGCATTGAACTTGGGAGGGGGAATATAACAGTAAAACTGGAACATATAGATGATAGTGAACGGGTTGTTCGCCATCCTCTTTCCACCATAACCCACAAAGGATTGAAATAGGTTCTTAATACCAAGCAGATACCAAAAGCATGAAATAAAGAAACGGCTATGCACTTGTAGTCTTGTACTAACAACAGATTTTAAGTCAAAAGCAACATTAAGGTACGAGACATAAAGGAACAAAGCATTGTCCACACCCACATGATTAACAATTTATTAATCCACTATCTCAAAGCTCCTTGAATTACAAGAGATGAACAAAAATGAGCTCCATCTTGACCAATAACATCCCCCGTACCTCCGGGAGCTCGAGAACTCGTTTCGAACTTATTTTGAACAACAGTCATACACATGATCTTCCTCCATAGATTAAAGTCTTCTGCCCAAAAAGTATTTCTATTTCGAATTCAAACCTTATTAATTCCATTTTGAAGTTTTCTTGAATTCCATCGATTTACTGTTATACATCGGAACCAAGCTCTGATACCACTCGTTGTTGTGCAATTATCTCAACACCCAATTTCGATATATATAAAGTAAGAAAACATAACCATTCAAAAACAGATGAAAGGAACAAAAGATTCAGGGTAATTCAGCACAGCAGAGTCCTCGAGCTTAGATAATTATTGTTGAGAGATTTCTTTGATGGGTAATTTTTTGCAATACCCCCTAAAGGGAATTTTCAAATATCAACGAAAAAGTTTCTATTTTCGAGTTAAAAAACAACCTGCAGAGAAGAATACATAATTCAGCGGAAAAGAGATGAAATTCACAAACGAAAGAGATAACTCACTGTTCCAAAAATTCTCAATCACTTCAAACATTCAAATAGAAAGGAAGAGACCACAATATAAGAGCCACATGTTCTAAAAAATATCCAAGGAAAAGGAGGCTAATAGCAACCATACAGAAACATTTCAGCAAGCATGTAGGAGCATCTAACAGATACAGCCCCGTAAGATGGAGAAAAATTCGACTCGCAAACAATTCAAGGGCTGCACAGACACGTACCTTGGTCATTTCGAGCTGTGAAGACTATGGAACCAGTTTCATCACCAACAAGACATTCAGAGATACGAGTTAATTGCTGAGGGCGAGCCGTGAGCATCGCGGATCGTCCACCTTTATTGACCATCTTCACATTTTTGGAGCTCACCACCTTGACGATGAGAGTATGGCCGCTCGTACCAGGCTTAAGCTCTTCTACTTTTATGAAGACCGGCTTCCTCTTTGCCGGGGCATTGACTGCTGCCGTCGCCATGGAAATTGAAGTAACAGAACGAAACCCTGTTGCCGAT

mRNA sequence

GGTAATTAAAAAGAAAGAAAGAAAAATGGAGAAACTCCCATTGTTCTCGAGAAGCGGCGGCAGGGTTTAGCATTTGAATGCCCTAAATCTTGAACGGAAGTCTGTTCATCGTGGCTGGCTCTGGACAATTTTTCGCCGCGTTCTCAGATTAACCGATGGCTTCCTCCGCCGCCAGGGCCATTTTCCGATCCTGCTCCGCCTCAGGTTTCAAGGCAACCTCTCGTCTGGCCACCGGAGCCAGAGCAGCCCCAGCTCGTTCACCATTTCGCATTTCGACTAAACCAAGTTTCTCTCAATGTGCTGTAAGGATTCCTGTGGAAATGAGCTTCTGTGTGGAGTCGATGCTTCCGTTCCATTCGGCTACTTCTTCGGCATTGATGACTTCAATGCTTTCTGTCTCTCCACGTAGTTATGGTTGGCTTTCAGAAGGTACTTTCAGTCTCTTCTTGTTCTTCCAGTAGTTCCTCGGGATCGGACTAGGTTATGGGCTAAGAACATATGTTTTCGTGTTCTGAAACTTTGCTAGGGTGAATTTTACTTCTTCAATGTTCTTGTTATACTGATAGGTTATTCTTTGGGCTTCTGATTTTTGTTGGCGGAAAATTGAATGTGCTGTGTTCGTTGAACAGCTTTATAATTTACTTGGATTGCCTTTGTGATGTACAACACAATGGAGGATAACATGTGATCTACACACCTGACCCTTTAAATTTGGATCTTATAGTGCAGGATGAAAAAGAGGGGGGAATGTAGTGAAAGGGAGTGTATAACTATATGGAAGAACCAAGGGGTTAGCTTTTATAATTCATTCATGATTCAATCACGATTCACAATTTCCTAAAACTGTTTGAAATCTTAAATAGAAAACTATTTTGAAAACAATTTTCCAAATAGTCTCCGACTGATTCAGCTCAAATGTCCTCGTTGAACCAATCCCAGTATTTTGGGCCAAGTATATTTCCCAACTGCTTTCTTGCTCTTTTGGCTAGATTGGGCAAATATCTTATCTTGCCCTTTTTTTGCTACTTTTTTCATATCAACGATGTTTAGCTTATTGTCTTAAGATAGCGATTAAATGCTGCATTATGAACTAGGATCCAACTTTGCCAAAGCTAAAGAAACAATTGGTAATAAATGGCTTTCATCCCACTGTAAGTTATGAATTTGTTGTTCTTGTCATGCTTGCATGTTACACGGACACGAATATCTCATCCACGTACTTGATCTTAAATATGAGGTTACTAATTGTAGTGTTTGATCAGTATTCAATGATGATGTGTGATAAATGGTCGAGGGGATTCCAAGAAAGTTTTGTATGCAGAGTTACACACTGTGACAGTGCCCGCTGATAAATTAGATGAGCTGATGCACAGGGATTTGGTTTTCCATGAGCTGACTCAGTCAAGTTTGCATATCTTTAATTCTTAACTTGTGTAACTATGGACTACTAGAATGTATAGGAAGATCTTACAGTAGACAGACATTTGAGTTTTATCTGAAAATGAAGGCTTAGAACCATTATGTTGAATTCCTTTATAGAGTTATCTTGCAATCGTGAAATAAAAATGCTTACTGAGGTAAGACTTGGAGGATTCTTCTCTAGCAGTCTTTATATTATCTTGTATGTTACTCTATCATTGCTCAGGCAATGTAGGTACTTCATATCTTACCACTTTAAAAGTTGTTATATACTAATATTAATCATATGAACTCGGAAAGATTTATCAAAGTTGAGCTATATGCAAGTTTGCATTCTAAGATAAAGTTTCTTGTTATAATGTAAATTCAGTACACATTATTATTGCGTCAAAGTTAAATATCACAATTGTTTTTTCACCATAAATTAAGCTAACAGAACAAATATATGCAGTGATAAAACCCTCTATTTACTTTTCCAATTGATACGATGAGAAAGTAGGACTTGCACTTCCCTTTCCAGATCCAAATTATAGTCCCAGCAATAATCAGCTAATATTACCCTTTCAGCAAGATTTGTGTTGCTATATAAAACTGTATCCCAGTTAATAGCAGCAGTCCTCCACCACACAATAGAAAGTAAATCCATGATAAATCAACATCGCATTATTTGAAGTCACTCTTCAACGTTAACTAATTCATATTCAACCAGAGAGAGATTGTTGTCCTCTTTAACCTCAAAGTTAGCTGGTTCGGCAACTTCAATTCGTCCCCATTTATCAACTGCTAACCTCATCGAGCCTTTAAACATGTCAATCTTTGCATTCCGCAGGGTCACGGTGTTACCTGGCTTCATGATATCAACTGCAAAAATTACGACCATTTGTTTAGACAACAAAACATTAGAAGCATTGAACTTGGGAGGGGGAATATAACAGTAAAACTGGAACATATAGATGATAGTGAACGGGTTGTTCGCCATCCTCTTTCCACCATAACCCACAAAGGATTGAAATAGGTTCTTAATACCAAGCAGATACCAAAAGCATGAAATAAAGAAACGGCTATGCACTTGTAGTCTTGTACTAACAACAGATTTTAAGTCAAAAGCAACATTAAGGTACGAGACATAAAGGAACAAAGCATTGTCCACACCCACATGATTAACAATTTATTAATCCACTATCTCAAAGCTCCTTGAATTACAAGAGATGAACAAAAATGAGCTCCATCTTGACCAATAACATCCCCCGTACCTCCGGGAGCTCGAGAACTCGTTTCGAACTTATTTTGAACAACAGTCATACACATGATCTTCCTCCATAGATTAAAGTCTTCTGCCCAAAAAGTATTTCTATTTCGAATTCAAACCTTATTAATTCCATTTTGAAGTTTTCTTGAATTCCATCGATTTACTGTTATACATCGGAACCAAGCTCTGATACCACTCGTTGTTGTGCAATTATCTCAACACCCAATTTCGATATATATAAAGTAAGAAAACATAACCATTCAAAAACAGATGAAAGGAACAAAAGATTCAGGGTAATTCAGCACAGCAGAGTCCTCGAGCTTAGATAATTATTGTTGAGAGATTTCTTTGATGGGTAATTTTTTGCAATACCCCCTAAAGGGAATTTTCAAATATCAACGAAAAAGTTTCTATTTTCGAGTTAAAAAACAACCTGCAGAGAAGAATACATAATTCAGCGGAAAAGAGATGAAATTCACAAACGAAAGAGATAACTCACTGTTCCAAAAATTCTCAATCACTTCAAACATTCAAATAGAAAGGAAGAGACCACAATATAAGAGCCACATGTTCTAAAAAATATCCAAGGAAAAGGAGGCTAATAGCAACCATACAGAAACATTTCAGCAAGCATGTAGGAGCATCTAACAGATACAGCCCCGTAAGATGGAGAAAAATTCGACTCGCAAACAATTCAAGGGCTGCACAGACACGTACCTTGGTCATTTCGAGCTGTGAAGACTATGGAACCAGTTTCATCACCAACAAGACATTCAGAGATACGAGTTAATTGCTGAGGGCGAGCCGTGAGCATCGCGGATCGTCCACCTTTATTGACCATCTTCACATTTTTGGAGCTCACCACCTTGACGATGAGAGTATGGCCGCTCGTACCAGGCTTAAGCTCTTCTACTTTTATGAAGACCGGCTTCCTCTTTGCCGGGGCATTGACTGCTGCCGTCGCCATGGAAATTGAAGTAACAGAACGAAACCCTGTTGCCGAT

Coding sequence (CDS)

ATGGCTTCCTCCGCCGCCAGGGCCATTTTCCGATCCTGCTCCGCCTCAGGTTTCAAGGCAACCTCTCGTCTGGCCACCGGAGCCAGAGCAGCCCCAGCTCGTTCACCATTTCGCATTTCGACTAAACCAAGTTTCTCTCAATGTGCTGTAAGGATTCCTGTGGAAATGAGCTTCTGTGTGGAGTCGATGCTTCCGTTCCATTCGGCTACTTCTTCGGCATTGATGACTTCAATGCTTTCTGTCTCTCCACGTAGTTATGGTTGGCTTTCAGAAGGTACTTTCAGTCTCTTCTTGTTCTTCCAGTAG

Protein sequence

MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSPRSYGWLSEGTFSLFLFFQ
Homology
[Close]
BLAST of MC04g0239 vs. ExPASy Swiss-Prot
Match: Q93ZJ3 (Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD6 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.9e-12
Identity = 45/89 (50.56%), Postives = 64/89 (71.91%), Query Frame = 0 

Query: 4  SAARAIFRSCSA-SGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCVES 63
          S AR++ R+ S+ S   +T R A+ A++AP    FR + + S     +R PVE+SFCVES
Sbjct: 8  SGARSMLRAASSRSAAASTGRFASQAKSAPPL--FRATARRSPLLSPLRNPVELSFCVES 67

Query: 64 MLPFHSATSSALMTSMLSVSPRSYGWLSE 92
          +LP+HSAT+SALMTS LS+S ++YGWLS+
Sbjct: 68 LLPYHSATASALMTSKLSISGQTYGWLSD 94

[Close]
BLAST of MC04g0239 vs. NCBI nr
Match: XP_022136010.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Momordica charantia])

HSP 1 Score: 174 bits (441), Expect = 3.75e-54
Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0 

Query: 1  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCV 60
          MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCV
Sbjct: 1  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCV 60

Query: 61 ESMLPFHSATSSALMTSMLSVSPRSYGWLSEGT 93
          ESMLPFHSATSSALMTSMLSVSPRSYGWLSEG+
Sbjct: 61 ESMLPFHSATSSALMTSMLSVSPRSYGWLSEGS 93

[Close]
BLAST of MC04g0239 vs. NCBI nr
Match: XP_022136012.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 [Momordica charantia])

HSP 1 Score: 171 bits (434), Expect = 2.66e-53
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0 

Query: 1  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCV 60
          MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCV
Sbjct: 1  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCV 60

Query: 61 ESMLPFHSATSSALMTSMLSVSPRSYGWLSE 91
          ESMLPFHSATSSALMTSMLSVSPRSYGWLSE
Sbjct: 61 ESMLPFHSATSSALMTSMLSVSPRSYGWLSE 91

[Close]
BLAST of MC04g0239 vs. NCBI nr
Match: XP_022136011.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Momordica charantia])

HSP 1 Score: 171 bits (434), Expect = 2.92e-53
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0 

Query: 1  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCV 60
          MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCV
Sbjct: 1  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCV 60

Query: 61 ESMLPFHSATSSALMTSMLSVSPRSYGWLSE 91
          ESMLPFHSATSSALMTSMLSVSPRSYGWLSE
Sbjct: 61 ESMLPFHSATSSALMTSMLSVSPRSYGWLSE 91

[Close]
BLAST of MC04g0239 vs. NCBI nr
Match: TYK15251.1 (protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa])

HSP 1 Score: 133 bits (334), Expect = 5.96e-38
Identity = 75/100 (75.00%), Postives = 81/100 (81.00%), Query Frame = 0 

Query: 1   MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCV 60
           MAS AARAIFRS S    KA + L+ GARAAPARSPFRI++K  FS  + RIP+EMSFCV
Sbjct: 1   MASFAARAIFRSSSG---KAATLLSAGARAAPARSPFRIASKRPFSHSSFRIPIEMSFCV 60

Query: 61  ESMLPFHSATSSALMTSMLSVSPRSYGWLSEGTFSLFLFF 100
           ESMLPFHSATSSALMTSMLSVSP SYGWLSEG  S F FF
Sbjct: 61  ESMLPFHSATSSALMTSMLSVSPHSYGWLSEGILSAFFFF 97

[Close]
BLAST of MC04g0239 vs. NCBI nr
Match: XP_038887457.1 (protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X3 [Benincasa hispida])

HSP 1 Score: 126 bits (317), Expect = 1.62e-35
Identity = 71/92 (77.17%), Postives = 77/92 (83.70%), Query Frame = 0 

Query: 1  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCV 60
          MAS A RAIFRS S    KA + L+ GARAAPARSPFRI++K  FSQC+VRIPVEMSFCV
Sbjct: 1  MASFAGRAIFRSSSG---KAATLLSVGARAAPARSPFRIASKRPFSQCSVRIPVEMSFCV 60

Query: 61 ESMLPFHSATSSALMTSMLSVSPRSYGWLSEG 92
          ESMLPFHSATSSALM SMLSVS  +YGWLSEG
Sbjct: 61 ESMLPFHSATSSALMISMLSVSRHNYGWLSEG 89

[Close]
BLAST of MC04g0239 vs. ExPASy TrEMBL
Match: A0A6J1C2N3 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007816 PE=4 SV=1)

HSP 1 Score: 174 bits (441), Expect = 1.82e-54
Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0 

Query: 1  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCV 60
          MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCV
Sbjct: 1  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCV 60

Query: 61 ESMLPFHSATSSALMTSMLSVSPRSYGWLSEGT 93
          ESMLPFHSATSSALMTSMLSVSPRSYGWLSEG+
Sbjct: 61 ESMLPFHSATSSALMTSMLSVSPRSYGWLSEGS 93

[Close]
BLAST of MC04g0239 vs. ExPASy TrEMBL
Match: A0A6J1C4D4 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111007816 PE=4 SV=1)

HSP 1 Score: 171 bits (434), Expect = 1.29e-53
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0 

Query: 1  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCV 60
          MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCV
Sbjct: 1  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCV 60

Query: 61 ESMLPFHSATSSALMTSMLSVSPRSYGWLSE 91
          ESMLPFHSATSSALMTSMLSVSPRSYGWLSE
Sbjct: 61 ESMLPFHSATSSALMTSMLSVSPRSYGWLSE 91

[Close]
BLAST of MC04g0239 vs. ExPASy TrEMBL
Match: A0A6J1C2B4 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007816 PE=4 SV=1)

HSP 1 Score: 171 bits (434), Expect = 1.41e-53
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0 

Query: 1  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCV 60
          MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCV
Sbjct: 1  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCV 60

Query: 61 ESMLPFHSATSSALMTSMLSVSPRSYGWLSE 91
          ESMLPFHSATSSALMTSMLSVSPRSYGWLSE
Sbjct: 61 ESMLPFHSATSSALMTSMLSVSPRSYGWLSE 91

[Close]
BLAST of MC04g0239 vs. ExPASy TrEMBL
Match: A0A5D3CTR8 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00250 PE=4 SV=1)

HSP 1 Score: 133 bits (334), Expect = 2.88e-38
Identity = 75/100 (75.00%), Postives = 81/100 (81.00%), Query Frame = 0 

Query: 1   MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCV 60
           MAS AARAIFRS S    KA + L+ GARAAPARSPFRI++K  FS  + RIP+EMSFCV
Sbjct: 1   MASFAARAIFRSSSG---KAATLLSAGARAAPARSPFRIASKRPFSHSSFRIPIEMSFCV 60

Query: 61  ESMLPFHSATSSALMTSMLSVSPRSYGWLSEGTFSLFLFF 100
           ESMLPFHSATSSALMTSMLSVSP SYGWLSEG  S F FF
Sbjct: 61  ESMLPFHSATSSALMTSMLSVSPHSYGWLSEGILSAFFFF 97

[Close]
BLAST of MC04g0239 vs. ExPASy TrEMBL
Match: A0A5A7TDD1 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G003170 PE=4 SV=1)

HSP 1 Score: 126 bits (317), Expect = 8.82e-36
Identity = 71/94 (75.53%), Postives = 77/94 (81.91%), Query Frame = 0 

Query: 1  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCV 60
          MAS AARAIFRS S    KA + L+ GARAAPARSPFRI++K  FS  + RIP+EMSFCV
Sbjct: 1  MASFAARAIFRSSSG---KAATLLSAGARAAPARSPFRIASKRPFSHSSFRIPIEMSFCV 60

Query: 61 ESMLPFHSATSSALMTSMLSVSPRSYGWLSEGTF 94
          ESMLPFHSATSSALMTSMLSVSP SYGWLSE  F
Sbjct: 61 ESMLPFHSATSSALMTSMLSVSPHSYGWLSEAAF 91

[Close]
BLAST of MC04g0239 vs. TAIR 10
Match: AT2G20585.3 (nuclear fusion defective 6 )

HSP 1 Score: 75.5 bits (184), Expect = 2.8e-14
Identity = 46/90 (51.11%), Postives = 65/90 (72.22%), Query Frame = 0 

Query: 4  SAARAIFRSCSA-SGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCVES 63
          S AR++ R+ S+ S   +T R A+ A++AP    FR + + S     +R PVE+SFCVES
Sbjct: 8  SGARSMLRAASSRSAAASTGRFASQAKSAPPL--FRATARRSPLLSPLRNPVELSFCVES 67

Query: 64 MLPFHSATSSALMTSMLSVSPRSYGWLSEG 93
          +LP+HSAT+SALMTS LS+S ++YGWLS+G
Sbjct: 68 LLPYHSATASALMTSKLSISGQTYGWLSDG 95

[Close]
BLAST of MC04g0239 vs. TAIR 10
Match: AT2G20585.1 (nuclear fusion defective 6 )

HSP 1 Score: 73.2 bits (178), Expect = 1.4e-13
Identity = 45/89 (50.56%), Postives = 64/89 (71.91%), Query Frame = 0 

Query: 4  SAARAIFRSCSA-SGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCVES 63
          S AR++ R+ S+ S   +T R A+ A++AP    FR + + S     +R PVE+SFCVES
Sbjct: 8  SGARSMLRAASSRSAAASTGRFASQAKSAPPL--FRATARRSPLLSPLRNPVELSFCVES 67

Query: 64 MLPFHSATSSALMTSMLSVSPRSYGWLSE 92
          +LP+HSAT+SALMTS LS+S ++YGWLS+
Sbjct: 68 LLPYHSATASALMTSKLSISGQTYGWLSD 94

[Close]
BLAST of MC04g0239 vs. TAIR 10
Match: AT2G20585.2 (nuclear fusion defective 6 )

HSP 1 Score: 73.2 bits (178), Expect = 1.4e-13
Identity = 45/89 (50.56%), Postives = 64/89 (71.91%), Query Frame = 0 

Query: 4  SAARAIFRSCSA-SGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFCVES 63
          S AR++ R+ S+ S   +T R A+ A++AP    FR + + S     +R PVE+SFCVES
Sbjct: 8  SGARSMLRAASSRSAAASTGRFASQAKSAPPL--FRATARRSPLLSPLRNPVELSFCVES 67

Query: 64 MLPFHSATSSALMTSMLSVSPRSYGWLSE 92
          +LP+HSAT+SALMTS LS+S ++YGWLS+
Sbjct: 68 LLPYHSATASALMTSKLSISGQTYGWLSD 94

[Close]
BLAST of MC04g0239 vs. TAIR 10
Match: AT1G28395.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.4 bits (163), Expect = 7.5e-12
Identity = 41/91 (45.05%), Postives = 59/91 (64.84%), Query Frame = 0 

Query: 4  SAARAIFRSCSASGFKATSRLATGARAAP--ARSPFRISTKPSFSQCAVRIPVEMSFCVE 63
          SAAR++FRS ++       R + G +  P  AR+ FR+  +   +    R PVE+S CVE
Sbjct: 2  SAARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVE 61

Query: 64 SMLPFHSATSSALMTSMLSVSPRSYGWLSEG 93
          +MLP+H+AT+SAL+ SMLSVS R  GW+ +G
Sbjct: 62 TMLPYHTATASALLNSMLSVSRR--GWIVDG 90

[Close]
BLAST of MC04g0239 vs. TAIR 10
Match: AT1G28395.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.4 bits (163), Expect = 7.5e-12
Identity = 41/91 (45.05%), Postives = 59/91 (64.84%), Query Frame = 0 

Query: 4  SAARAIFRSCSASGFKATSRLATGARAAP--ARSPFRISTKPSFSQCAVRIPVEMSFCVE 63
          SAAR++FRS ++       R + G +  P  AR+ FR+  +   +    R PVE+S CVE
Sbjct: 2  SAARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVE 61

Query: 64 SMLPFHSATSSALMTSMLSVSPRSYGWLSEG 93
          +MLP+H+AT+SAL+ SMLSVS R  GW+ +G
Sbjct: 62 TMLPYHTATASALLNSMLSVSRR--GWIVDG 90

The following BLAST results are available for this feature:
BLAST of MC04g0239 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q93ZJ31.9e-1250.56Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=370... [more]
BLAST of MC04g0239 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022136010.13.75e-5498.92protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ... [more]
XP_022136012.12.66e-53100.00protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 ... [more]
XP_022136011.12.92e-53100.00protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 ... [more]
TYK15251.15.96e-3875.00protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa][more]
XP_038887457.11.62e-3577.17protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X3 [Benincasa his... [more]
BLAST of MC04g0239 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C2N31.82e-5498.92protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ... [more]
A0A6J1C4D41.29e-53100.00protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 ... [more]
A0A6J1C2B41.41e-53100.00protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 ... [more]
A0A5D3CTR82.88e-3875.00Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A5A7TDD18.82e-3675.53Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... [more]
BLAST of MC04g0239 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G20585.32.8e-1451.11nuclear fusion defective 6 [more]
AT2G20585.11.4e-1350.56nuclear fusion defective 6 [more]
AT2G20585.21.4e-1350.56nuclear fusion defective 6 [more]
AT1G28395.27.5e-1245.05unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G28395.17.5e-1245.05unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043459NFD6/NOXY2-likePANTHERPTHR33156OS02G0230000 PROTEINcoord: 3..92
IPR033251Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrialPANTHERPTHR33156:SF48PROTEIN NUCLEAR FUSION DEFECTIVE 6, CHLOROPLASTIC/MITOCHONDRIALcoord: 3..92

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC04g0239.1MC04g0239.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000741 karyogamy
cellular_component GO:0016021 integral component of membrane