Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGGCCGAGGCCTAATCAGTCCCCCGAAAAGCCGATTTTCTGTCACAGAATCCGACTCACAAAATAATGCCGCCGCCAATCCGCCGTCGATGCCCAATTACATGTCAGCAACCCGGCGATCCACGGCGGCGAGGGTGGTCAATCCCAAACAGCAGCAGACCACTCACACAAAACCCACTTTTGGTTCTAATGCTATTCGTGCAACCAAAAACAGTTCGCCAAAACCCACCCCCGTCGTGCCTTCCCGGCGGCGGCCCACATGGGCGCCAAATAATCCTAACGGCCACAACGACAATTCCACCACCAAATTAACGATCGCTAAAATTACCACAAGTAGAAACTCGAACGTTAATGGAGTTCAACAACAACCGCGTGGGCCAACACTAATTTCCGTTGCTTCTGGTTCCAGCCATGGATCGGGTCATCACCAAGATGCGAACAACAATAACATTGAAGGCGAAGAAGAAGATTCTACTACAGTGATCGGTCATCCTCATGTTATCAATCAATTACAACAGCTTTCTATAGACGGTGAGCTTATATAA
mRNA sequence
ATGAGAGGCCGAGGCCTAATCAGTCCCCCGAAAAGCCGATTTTCTGTCACAGAATCCGACTCACAAAATAATGCCGCCGCCAATCCGCCGTCGATGCCCAATTACATGTCAGCAACCCGGCGATCCACGGCGGCGAGGGTGGTCAATCCCAAACAGCAGCAGACCACTCACACAAAACCCACTTTTGGTTCTAATGCTATTCGTGCAACCAAAAACAGTTCGCCAAAACCCACCCCCGTCGTGCCTTCCCGGCGGCGGCCCACATGGGCGCCAAATAATCCTAACGGCCACAACGACAATTCCACCACCAAATTAACGATCGCTAAAATTACCACAAGTAGAAACTCGAACGTTAATGGAGTTCAACAACAACCGCGTGGGCCAACACTAATTTCCGTTGCTTCTGGTTCCAGCCATGGATCGGGTCATCACCAAGATGCGAACAACAATAACATTGAAGGCGAAGAAGAAGATTCTACTACAGTGATCGGTCATCCTCATGTTATCAATCAATTACAACAGCTTTCTATAGACGGTGAGCTTATATAA
Coding sequence (CDS)
ATGAGAGGCCGAGGCCTAATCAGTCCCCCGAAAAGCCGATTTTCTGTCACAGAATCCGACTCACAAAATAATGCCGCCGCCAATCCGCCGTCGATGCCCAATTACATGTCAGCAACCCGGCGATCCACGGCGGCGAGGGTGGTCAATCCCAAACAGCAGCAGACCACTCACACAAAACCCACTTTTGGTTCTAATGCTATTCGTGCAACCAAAAACAGTTCGCCAAAACCCACCCCCGTCGTGCCTTCCCGGCGGCGGCCCACATGGGCGCCAAATAATCCTAACGGCCACAACGACAATTCCACCACCAAATTAACGATCGCTAAAATTACCACAAGTAGAAACTCGAACGTTAATGGAGTTCAACAACAACCGCGTGGGCCAACACTAATTTCCGTTGCTTCTGGTTCCAGCCATGGATCGGGTCATCACCAAGATGCGAACAACAATAACATTGAAGGCGAAGAAGAAGATTCTACTACAGTGATCGGTCATCCTCATGTTATCAATCAATTACAACAGCTTTCTATAGACGGTGAGCTTATATAA
Protein sequence
MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKPTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITTSRNSNVNGVQQQPRGPTLISVASGSSHGSGHHQDANNNNIEGEEEDSTTVIGHPHVINQLQQLSIDGELI
Homology
BLAST of MC03g_new0377 vs. NCBI nr
Match:
XP_022137569.1 (uncharacterized protein LOC111008986 [Momordica charantia])
HSP 1 Score: 348 bits (892), Expect = 1.72e-118
Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 0
Query: 1 MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKP 60
MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKP
Sbjct: 4 MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKP 63
Query: 61 TFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITTSRNSNVNG 120
TFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITTSRNSNVNG
Sbjct: 64 TFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITTSRNSNVNG 123
Query: 121 VQQQPRGPTLISVASGSSHGSGHHQDANNNNIEGEEEDSTTVIGHPHVINQLQQLSIDGE 180
VQQQPRGPTLISVASGSSHGSGHHQDANNNNIEGEEEDSTTVIGHPHVINQLQQLSIDG+
Sbjct: 124 VQQQPRGPTLISVASGSSHGSGHHQDANNNNIEGEEEDSTTVIGHPHVINQLQQLSIDGK 183
BLAST of MC03g_new0377 vs. NCBI nr
Match:
XP_022137024.1 (uncharacterized protein LOC111008588 [Momordica charantia] >XP_022137025.1 uncharacterized protein LOC111008588 [Momordica charantia] >XP_022137026.1 uncharacterized protein LOC111008588 [Momordica charantia])
HSP 1 Score: 82.0 bits (201), Expect = 1.69e-14
Identity = 85/221 (38.46%), Postives = 104/221 (47.06%), Query Frame = 0
Query: 4 RGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKPTFG 63
RGLISPP+SR S + NN A NPPS PNYMS RR T A +Q TH KP+
Sbjct: 50 RGLISPPRSRSSPRDFRPHNNGAPNPPSRPNYMSPRRRPTTAE----QQHTQTHRKPS-- 109
Query: 64 SNAIRATKNS------SPKPT-PVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITTSRNS 123
+ A RATK S SPKPT P+VPSRR PN + HN T KI ++ S
Sbjct: 110 ATATRATKKSPPRIRPSPKPTAPIVPSRR-----PNPNDLHNQKKLDTKTTPKIGGAKPS 169
Query: 124 NV--------NGVQQQPRGPTLIS------------VASGS-----------------SH 180
+ NGV+ PRGPT IS +AS S S
Sbjct: 170 SPRTQPQRLRNGVEP-PRGPTPISKNTTPKPKPAIAIASASRSDSPAANSSPSSKHLPSP 229
BLAST of MC03g_new0377 vs. NCBI nr
Match:
XP_022137506.1 (uncharacterized protein LOC111008934 isoform X2 [Momordica charantia])
HSP 1 Score: 56.6 bits (135), Expect = 9.12e-06
Identity = 72/211 (34.12%), Postives = 92/211 (43.60%), Query Frame = 0
Query: 1 MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNY-MSATRRSTAARVVNPKQQQTTH-- 60
M RGLISPP++ FS NNAAANPP PNY MS R T VVNP +Q
Sbjct: 1 MTKRGLISPPRA-FS-----GPNNAAANPPMRPNYRMSPPPRPTT--VVNPSEQMFYEHW 60
Query: 61 TKPTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITTS---R 120
K T SNAIRAT + P P + +++ + +N+NS+TK T T R
Sbjct: 61 LKATSSSNAIRATHIAPPNPYDLQNHQKKLD------HNNNNNSSTKTTAPPPTRHQRLR 120
Query: 121 NSNV---NGVQQQPRGPTLISVASG-----------------------SSHGSGHHQDAN 179
N N +P+GPT S S HGSG Q N
Sbjct: 121 NGATLISNNTAPRPKGPTASGSRSDPLDANLIAPKFSDSPNNSSPNHLSIHGSGQRQ--N 180
BLAST of MC03g_new0377 vs. NCBI nr
Match:
XP_022137505.1 (uncharacterized protein LOC111008934 isoform X1 [Momordica charantia])
HSP 1 Score: 56.6 bits (135), Expect = 9.33e-06
Identity = 72/211 (34.12%), Postives = 92/211 (43.60%), Query Frame = 0
Query: 1 MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNY-MSATRRSTAARVVNPKQQQTTH-- 60
M RGLISPP++ FS NNAAANPP PNY MS R T VVNP +Q
Sbjct: 1 MTKRGLISPPRA-FS-----GPNNAAANPPMRPNYRMSPPPRPTT--VVNPSEQMFYEHW 60
Query: 61 TKPTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITTS---R 120
K T SNAIRAT + P P + +++ + +N+NS+TK T T R
Sbjct: 61 LKATSSSNAIRATHIAPPNPYDLQNHQKKLD------HNNNNNSSTKTTAPPPTRHQRLR 120
Query: 121 NSNV---NGVQQQPRGPTLISVASG-----------------------SSHGSGHHQDAN 179
N N +P+GPT S S HGSG Q N
Sbjct: 121 NGATLISNNTAPRPKGPTASGSRSDPLDANLIAPKFSDSPNNSSPNHLSIHGSGQRQ--N 180
BLAST of MC03g_new0377 vs. NCBI nr
Match:
XP_022994450.1 (sporozoite surface protein 2-like [Cucurbita maxima])
HSP 1 Score: 53.9 bits (128), Expect = 6.18e-05
Identity = 47/113 (41.59%), Postives = 56/113 (49.56%), Query Frame = 0
Query: 4 RGLISPPKSRFSVTESDS-QNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTK--- 63
RG+ISPP+SR S ES NN A NPPS PNYMS RR T +NP + +T H K
Sbjct: 3 RGIISPPRSRSSPRESRPFNNNGATNPPSKPNYMSPRRRPTTP--INPNELRT-HRKEPQ 62
Query: 64 PTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITT 112
PT + T SS P + PSR P+ P + N T K TT
Sbjct: 63 PTVVKRPTKPTDRSS-NPPRIDPSRPNSKLVPSRPAAPSPNEKKLDTKTKTTT 111
BLAST of MC03g_new0377 vs. ExPASy TrEMBL
Match:
A0A6J1C7L7 (uncharacterized protein LOC111008986 OS=Momordica charantia OX=3673 GN=LOC111008986 PE=4 SV=1)
HSP 1 Score: 348 bits (892), Expect = 8.33e-119
Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 0
Query: 1 MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKP 60
MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKP
Sbjct: 4 MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKP 63
Query: 61 TFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITTSRNSNVNG 120
TFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITTSRNSNVNG
Sbjct: 64 TFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITTSRNSNVNG 123
Query: 121 VQQQPRGPTLISVASGSSHGSGHHQDANNNNIEGEEEDSTTVIGHPHVINQLQQLSIDGE 180
VQQQPRGPTLISVASGSSHGSGHHQDANNNNIEGEEEDSTTVIGHPHVINQLQQLSIDG+
Sbjct: 124 VQQQPRGPTLISVASGSSHGSGHHQDANNNNIEGEEEDSTTVIGHPHVINQLQQLSIDGK 183
BLAST of MC03g_new0377 vs. ExPASy TrEMBL
Match:
A0A6J1C5Z8 (uncharacterized protein LOC111008588 OS=Momordica charantia OX=3673 GN=LOC111008588 PE=4 SV=1)
HSP 1 Score: 82.0 bits (201), Expect = 8.17e-15
Identity = 85/221 (38.46%), Postives = 104/221 (47.06%), Query Frame = 0
Query: 4 RGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKPTFG 63
RGLISPP+SR S + NN A NPPS PNYMS RR T A +Q TH KP+
Sbjct: 50 RGLISPPRSRSSPRDFRPHNNGAPNPPSRPNYMSPRRRPTTAE----QQHTQTHRKPS-- 109
Query: 64 SNAIRATKNS------SPKPT-PVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITTSRNS 123
+ A RATK S SPKPT P+VPSRR PN + HN T KI ++ S
Sbjct: 110 ATATRATKKSPPRIRPSPKPTAPIVPSRR-----PNPNDLHNQKKLDTKTTPKIGGAKPS 169
Query: 124 NV--------NGVQQQPRGPTLIS------------VASGS-----------------SH 180
+ NGV+ PRGPT IS +AS S S
Sbjct: 170 SPRTQPQRLRNGVEP-PRGPTPISKNTTPKPKPAIAIASASRSDSPAANSSPSSKHLPSP 229
BLAST of MC03g_new0377 vs. ExPASy TrEMBL
Match:
A0A6J1C6T8 (uncharacterized protein LOC111008934 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008934 PE=4 SV=1)
HSP 1 Score: 56.6 bits (135), Expect = 4.42e-06
Identity = 72/211 (34.12%), Postives = 92/211 (43.60%), Query Frame = 0
Query: 1 MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNY-MSATRRSTAARVVNPKQQQTTH-- 60
M RGLISPP++ FS NNAAANPP PNY MS R T VVNP +Q
Sbjct: 1 MTKRGLISPPRA-FS-----GPNNAAANPPMRPNYRMSPPPRPTT--VVNPSEQMFYEHW 60
Query: 61 TKPTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITTS---R 120
K T SNAIRAT + P P + +++ + +N+NS+TK T T R
Sbjct: 61 LKATSSSNAIRATHIAPPNPYDLQNHQKKLD------HNNNNNSSTKTTAPPPTRHQRLR 120
Query: 121 NSNV---NGVQQQPRGPTLISVASG-----------------------SSHGSGHHQDAN 179
N N +P+GPT S S HGSG Q N
Sbjct: 121 NGATLISNNTAPRPKGPTASGSRSDPLDANLIAPKFSDSPNNSSPNHLSIHGSGQRQ--N 180
BLAST of MC03g_new0377 vs. ExPASy TrEMBL
Match:
A0A6J1C6U3 (uncharacterized protein LOC111008934 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008934 PE=4 SV=1)
HSP 1 Score: 56.6 bits (135), Expect = 4.52e-06
Identity = 72/211 (34.12%), Postives = 92/211 (43.60%), Query Frame = 0
Query: 1 MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNY-MSATRRSTAARVVNPKQQQTTH-- 60
M RGLISPP++ FS NNAAANPP PNY MS R T VVNP +Q
Sbjct: 1 MTKRGLISPPRA-FS-----GPNNAAANPPMRPNYRMSPPPRPTT--VVNPSEQMFYEHW 60
Query: 61 TKPTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITTS---R 120
K T SNAIRAT + P P + +++ + +N+NS+TK T T R
Sbjct: 61 LKATSSSNAIRATHIAPPNPYDLQNHQKKLD------HNNNNNSSTKTTAPPPTRHQRLR 120
Query: 121 NSNV---NGVQQQPRGPTLISVASG-----------------------SSHGSGHHQDAN 179
N N +P+GPT S S HGSG Q N
Sbjct: 121 NGATLISNNTAPRPKGPTASGSRSDPLDANLIAPKFSDSPNNSSPNHLSIHGSGQRQ--N 180
BLAST of MC03g_new0377 vs. ExPASy TrEMBL
Match:
A0A6J1K179 (sporozoite surface protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111490168 PE=4 SV=1)
HSP 1 Score: 53.9 bits (128), Expect = 2.99e-05
Identity = 47/113 (41.59%), Postives = 56/113 (49.56%), Query Frame = 0
Query: 4 RGLISPPKSRFSVTESDS-QNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTK--- 63
RG+ISPP+SR S ES NN A NPPS PNYMS RR T +NP + +T H K
Sbjct: 3 RGIISPPRSRSSPRESRPFNNNGATNPPSKPNYMSPRRRPTTP--INPNELRT-HRKEPQ 62
Query: 64 PTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITT 112
PT + T SS P + PSR P+ P + N T K TT
Sbjct: 63 PTVVKRPTKPTDRSS-NPPRIDPSRPNSKLVPSRPAAPSPNEKKLDTKTKTTT 111
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_022137569.1 | 1.72e-118 | 99.44 | uncharacterized protein LOC111008986 [Momordica charantia] | [more] |
XP_022137024.1 | 1.69e-14 | 38.46 | uncharacterized protein LOC111008588 [Momordica charantia] >XP_022137025.1 uncha... | [more] |
XP_022137506.1 | 9.12e-06 | 34.12 | uncharacterized protein LOC111008934 isoform X2 [Momordica charantia] | [more] |
XP_022137505.1 | 9.33e-06 | 34.12 | uncharacterized protein LOC111008934 isoform X1 [Momordica charantia] | [more] |
XP_022994450.1 | 6.18e-05 | 41.59 | sporozoite surface protein 2-like [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1C7L7 | 8.33e-119 | 99.44 | uncharacterized protein LOC111008986 OS=Momordica charantia OX=3673 GN=LOC111008... | [more] |
A0A6J1C5Z8 | 8.17e-15 | 38.46 | uncharacterized protein LOC111008588 OS=Momordica charantia OX=3673 GN=LOC111008... | [more] |
A0A6J1C6T8 | 4.42e-06 | 34.12 | uncharacterized protein LOC111008934 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1C6U3 | 4.52e-06 | 34.12 | uncharacterized protein LOC111008934 isoform X1 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1K179 | 2.99e-05 | 41.59 | sporozoite surface protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111490168 PE... | [more] |
Match Name | E-value | Identity | Description | |