MC03g_new0377 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC03g_new0377
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC03: 15782437 .. 15782985 (-)
RNA-Seq ExpressionMC03g_new0377
SyntenyMC03g_new0377
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGGCCGAGGCCTAATCAGTCCCCCGAAAAGCCGATTTTCTGTCACAGAATCCGACTCACAAAATAATGCCGCCGCCAATCCGCCGTCGATGCCCAATTACATGTCAGCAACCCGGCGATCCACGGCGGCGAGGGTGGTCAATCCCAAACAGCAGCAGACCACTCACACAAAACCCACTTTTGGTTCTAATGCTATTCGTGCAACCAAAAACAGTTCGCCAAAACCCACCCCCGTCGTGCCTTCCCGGCGGCGGCCCACATGGGCGCCAAATAATCCTAACGGCCACAACGACAATTCCACCACCAAATTAACGATCGCTAAAATTACCACAAGTAGAAACTCGAACGTTAATGGAGTTCAACAACAACCGCGTGGGCCAACACTAATTTCCGTTGCTTCTGGTTCCAGCCATGGATCGGGTCATCACCAAGATGCGAACAACAATAACATTGAAGGCGAAGAAGAAGATTCTACTACAGTGATCGGTCATCCTCATGTTATCAATCAATTACAACAGCTTTCTATAGACGGTGAGCTTATATAA

mRNA sequence

ATGAGAGGCCGAGGCCTAATCAGTCCCCCGAAAAGCCGATTTTCTGTCACAGAATCCGACTCACAAAATAATGCCGCCGCCAATCCGCCGTCGATGCCCAATTACATGTCAGCAACCCGGCGATCCACGGCGGCGAGGGTGGTCAATCCCAAACAGCAGCAGACCACTCACACAAAACCCACTTTTGGTTCTAATGCTATTCGTGCAACCAAAAACAGTTCGCCAAAACCCACCCCCGTCGTGCCTTCCCGGCGGCGGCCCACATGGGCGCCAAATAATCCTAACGGCCACAACGACAATTCCACCACCAAATTAACGATCGCTAAAATTACCACAAGTAGAAACTCGAACGTTAATGGAGTTCAACAACAACCGCGTGGGCCAACACTAATTTCCGTTGCTTCTGGTTCCAGCCATGGATCGGGTCATCACCAAGATGCGAACAACAATAACATTGAAGGCGAAGAAGAAGATTCTACTACAGTGATCGGTCATCCTCATGTTATCAATCAATTACAACAGCTTTCTATAGACGGTGAGCTTATATAA

Coding sequence (CDS)

ATGAGAGGCCGAGGCCTAATCAGTCCCCCGAAAAGCCGATTTTCTGTCACAGAATCCGACTCACAAAATAATGCCGCCGCCAATCCGCCGTCGATGCCCAATTACATGTCAGCAACCCGGCGATCCACGGCGGCGAGGGTGGTCAATCCCAAACAGCAGCAGACCACTCACACAAAACCCACTTTTGGTTCTAATGCTATTCGTGCAACCAAAAACAGTTCGCCAAAACCCACCCCCGTCGTGCCTTCCCGGCGGCGGCCCACATGGGCGCCAAATAATCCTAACGGCCACAACGACAATTCCACCACCAAATTAACGATCGCTAAAATTACCACAAGTAGAAACTCGAACGTTAATGGAGTTCAACAACAACCGCGTGGGCCAACACTAATTTCCGTTGCTTCTGGTTCCAGCCATGGATCGGGTCATCACCAAGATGCGAACAACAATAACATTGAAGGCGAAGAAGAAGATTCTACTACAGTGATCGGTCATCCTCATGTTATCAATCAATTACAACAGCTTTCTATAGACGGTGAGCTTATATAA

Protein sequence

MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKPTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITTSRNSNVNGVQQQPRGPTLISVASGSSHGSGHHQDANNNNIEGEEEDSTTVIGHPHVINQLQQLSIDGELI
Homology
BLAST of MC03g_new0377 vs. NCBI nr
Match: XP_022137569.1 (uncharacterized protein LOC111008986 [Momordica charantia])

HSP 1 Score: 348 bits (892), Expect = 1.72e-118
Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 0

Query: 1   MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKP 60
           MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKP
Sbjct: 4   MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKP 63

Query: 61  TFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITTSRNSNVNG 120
           TFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITTSRNSNVNG
Sbjct: 64  TFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITTSRNSNVNG 123

Query: 121 VQQQPRGPTLISVASGSSHGSGHHQDANNNNIEGEEEDSTTVIGHPHVINQLQQLSIDGE 180
           VQQQPRGPTLISVASGSSHGSGHHQDANNNNIEGEEEDSTTVIGHPHVINQLQQLSIDG+
Sbjct: 124 VQQQPRGPTLISVASGSSHGSGHHQDANNNNIEGEEEDSTTVIGHPHVINQLQQLSIDGK 183

BLAST of MC03g_new0377 vs. NCBI nr
Match: XP_022137024.1 (uncharacterized protein LOC111008588 [Momordica charantia] >XP_022137025.1 uncharacterized protein LOC111008588 [Momordica charantia] >XP_022137026.1 uncharacterized protein LOC111008588 [Momordica charantia])

HSP 1 Score: 82.0 bits (201), Expect = 1.69e-14
Identity = 85/221 (38.46%), Postives = 104/221 (47.06%), Query Frame = 0

Query: 4   RGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKPTFG 63
           RGLISPP+SR S  +    NN A NPPS PNYMS  RR T A     +Q   TH KP+  
Sbjct: 50  RGLISPPRSRSSPRDFRPHNNGAPNPPSRPNYMSPRRRPTTAE----QQHTQTHRKPS-- 109

Query: 64  SNAIRATKNS------SPKPT-PVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITTSRNS 123
           + A RATK S      SPKPT P+VPSRR     PN  + HN       T  KI  ++ S
Sbjct: 110 ATATRATKKSPPRIRPSPKPTAPIVPSRR-----PNPNDLHNQKKLDTKTTPKIGGAKPS 169

Query: 124 NV--------NGVQQQPRGPTLIS------------VASGS-----------------SH 180
           +         NGV+  PRGPT IS            +AS S                 S 
Sbjct: 170 SPRTQPQRLRNGVEP-PRGPTPISKNTTPKPKPAIAIASASRSDSPAANSSPSSKHLPSP 229

BLAST of MC03g_new0377 vs. NCBI nr
Match: XP_022137506.1 (uncharacterized protein LOC111008934 isoform X2 [Momordica charantia])

HSP 1 Score: 56.6 bits (135), Expect = 9.12e-06
Identity = 72/211 (34.12%), Postives = 92/211 (43.60%), Query Frame = 0

Query: 1   MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNY-MSATRRSTAARVVNPKQQQTTH-- 60
           M  RGLISPP++ FS       NNAAANPP  PNY MS   R T   VVNP +Q      
Sbjct: 1   MTKRGLISPPRA-FS-----GPNNAAANPPMRPNYRMSPPPRPTT--VVNPSEQMFYEHW 60

Query: 61  TKPTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITTS---R 120
            K T  SNAIRAT  + P P  +   +++        + +N+NS+TK T    T     R
Sbjct: 61  LKATSSSNAIRATHIAPPNPYDLQNHQKKLD------HNNNNNSSTKTTAPPPTRHQRLR 120

Query: 121 NSNV---NGVQQQPRGPTLISVASG-----------------------SSHGSGHHQDAN 179
           N      N    +P+GPT     S                        S HGSG  Q  N
Sbjct: 121 NGATLISNNTAPRPKGPTASGSRSDPLDANLIAPKFSDSPNNSSPNHLSIHGSGQRQ--N 180

BLAST of MC03g_new0377 vs. NCBI nr
Match: XP_022137505.1 (uncharacterized protein LOC111008934 isoform X1 [Momordica charantia])

HSP 1 Score: 56.6 bits (135), Expect = 9.33e-06
Identity = 72/211 (34.12%), Postives = 92/211 (43.60%), Query Frame = 0

Query: 1   MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNY-MSATRRSTAARVVNPKQQQTTH-- 60
           M  RGLISPP++ FS       NNAAANPP  PNY MS   R T   VVNP +Q      
Sbjct: 1   MTKRGLISPPRA-FS-----GPNNAAANPPMRPNYRMSPPPRPTT--VVNPSEQMFYEHW 60

Query: 61  TKPTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITTS---R 120
            K T  SNAIRAT  + P P  +   +++        + +N+NS+TK T    T     R
Sbjct: 61  LKATSSSNAIRATHIAPPNPYDLQNHQKKLD------HNNNNNSSTKTTAPPPTRHQRLR 120

Query: 121 NSNV---NGVQQQPRGPTLISVASG-----------------------SSHGSGHHQDAN 179
           N      N    +P+GPT     S                        S HGSG  Q  N
Sbjct: 121 NGATLISNNTAPRPKGPTASGSRSDPLDANLIAPKFSDSPNNSSPNHLSIHGSGQRQ--N 180

BLAST of MC03g_new0377 vs. NCBI nr
Match: XP_022994450.1 (sporozoite surface protein 2-like [Cucurbita maxima])

HSP 1 Score: 53.9 bits (128), Expect = 6.18e-05
Identity = 47/113 (41.59%), Postives = 56/113 (49.56%), Query Frame = 0

Query: 4   RGLISPPKSRFSVTESDS-QNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTK--- 63
           RG+ISPP+SR S  ES    NN A NPPS PNYMS  RR T    +NP + +T H K   
Sbjct: 3   RGIISPPRSRSSPRESRPFNNNGATNPPSKPNYMSPRRRPTTP--INPNELRT-HRKEPQ 62

Query: 64  PTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITT 112
           PT      + T  SS  P  + PSR      P+ P   + N     T  K TT
Sbjct: 63  PTVVKRPTKPTDRSS-NPPRIDPSRPNSKLVPSRPAAPSPNEKKLDTKTKTTT 111

BLAST of MC03g_new0377 vs. ExPASy TrEMBL
Match: A0A6J1C7L7 (uncharacterized protein LOC111008986 OS=Momordica charantia OX=3673 GN=LOC111008986 PE=4 SV=1)

HSP 1 Score: 348 bits (892), Expect = 8.33e-119
Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 0

Query: 1   MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKP 60
           MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKP
Sbjct: 4   MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKP 63

Query: 61  TFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITTSRNSNVNG 120
           TFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITTSRNSNVNG
Sbjct: 64  TFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITTSRNSNVNG 123

Query: 121 VQQQPRGPTLISVASGSSHGSGHHQDANNNNIEGEEEDSTTVIGHPHVINQLQQLSIDGE 180
           VQQQPRGPTLISVASGSSHGSGHHQDANNNNIEGEEEDSTTVIGHPHVINQLQQLSIDG+
Sbjct: 124 VQQQPRGPTLISVASGSSHGSGHHQDANNNNIEGEEEDSTTVIGHPHVINQLQQLSIDGK 183

BLAST of MC03g_new0377 vs. ExPASy TrEMBL
Match: A0A6J1C5Z8 (uncharacterized protein LOC111008588 OS=Momordica charantia OX=3673 GN=LOC111008588 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 8.17e-15
Identity = 85/221 (38.46%), Postives = 104/221 (47.06%), Query Frame = 0

Query: 4   RGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKPTFG 63
           RGLISPP+SR S  +    NN A NPPS PNYMS  RR T A     +Q   TH KP+  
Sbjct: 50  RGLISPPRSRSSPRDFRPHNNGAPNPPSRPNYMSPRRRPTTAE----QQHTQTHRKPS-- 109

Query: 64  SNAIRATKNS------SPKPT-PVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITTSRNS 123
           + A RATK S      SPKPT P+VPSRR     PN  + HN       T  KI  ++ S
Sbjct: 110 ATATRATKKSPPRIRPSPKPTAPIVPSRR-----PNPNDLHNQKKLDTKTTPKIGGAKPS 169

Query: 124 NV--------NGVQQQPRGPTLIS------------VASGS-----------------SH 180
           +         NGV+  PRGPT IS            +AS S                 S 
Sbjct: 170 SPRTQPQRLRNGVEP-PRGPTPISKNTTPKPKPAIAIASASRSDSPAANSSPSSKHLPSP 229

BLAST of MC03g_new0377 vs. ExPASy TrEMBL
Match: A0A6J1C6T8 (uncharacterized protein LOC111008934 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008934 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.42e-06
Identity = 72/211 (34.12%), Postives = 92/211 (43.60%), Query Frame = 0

Query: 1   MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNY-MSATRRSTAARVVNPKQQQTTH-- 60
           M  RGLISPP++ FS       NNAAANPP  PNY MS   R T   VVNP +Q      
Sbjct: 1   MTKRGLISPPRA-FS-----GPNNAAANPPMRPNYRMSPPPRPTT--VVNPSEQMFYEHW 60

Query: 61  TKPTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITTS---R 120
            K T  SNAIRAT  + P P  +   +++        + +N+NS+TK T    T     R
Sbjct: 61  LKATSSSNAIRATHIAPPNPYDLQNHQKKLD------HNNNNNSSTKTTAPPPTRHQRLR 120

Query: 121 NSNV---NGVQQQPRGPTLISVASG-----------------------SSHGSGHHQDAN 179
           N      N    +P+GPT     S                        S HGSG  Q  N
Sbjct: 121 NGATLISNNTAPRPKGPTASGSRSDPLDANLIAPKFSDSPNNSSPNHLSIHGSGQRQ--N 180

BLAST of MC03g_new0377 vs. ExPASy TrEMBL
Match: A0A6J1C6U3 (uncharacterized protein LOC111008934 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008934 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.52e-06
Identity = 72/211 (34.12%), Postives = 92/211 (43.60%), Query Frame = 0

Query: 1   MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNY-MSATRRSTAARVVNPKQQQTTH-- 60
           M  RGLISPP++ FS       NNAAANPP  PNY MS   R T   VVNP +Q      
Sbjct: 1   MTKRGLISPPRA-FS-----GPNNAAANPPMRPNYRMSPPPRPTT--VVNPSEQMFYEHW 60

Query: 61  TKPTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITTS---R 120
            K T  SNAIRAT  + P P  +   +++        + +N+NS+TK T    T     R
Sbjct: 61  LKATSSSNAIRATHIAPPNPYDLQNHQKKLD------HNNNNNSSTKTTAPPPTRHQRLR 120

Query: 121 NSNV---NGVQQQPRGPTLISVASG-----------------------SSHGSGHHQDAN 179
           N      N    +P+GPT     S                        S HGSG  Q  N
Sbjct: 121 NGATLISNNTAPRPKGPTASGSRSDPLDANLIAPKFSDSPNNSSPNHLSIHGSGQRQ--N 180

BLAST of MC03g_new0377 vs. ExPASy TrEMBL
Match: A0A6J1K179 (sporozoite surface protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111490168 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.99e-05
Identity = 47/113 (41.59%), Postives = 56/113 (49.56%), Query Frame = 0

Query: 4   RGLISPPKSRFSVTESDS-QNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTK--- 63
           RG+ISPP+SR S  ES    NN A NPPS PNYMS  RR T    +NP + +T H K   
Sbjct: 3   RGIISPPRSRSSPRESRPFNNNGATNPPSKPNYMSPRRRPTTP--INPNELRT-HRKEPQ 62

Query: 64  PTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITT 112
           PT      + T  SS  P  + PSR      P+ P   + N     T  K TT
Sbjct: 63  PTVVKRPTKPTDRSS-NPPRIDPSRPNSKLVPSRPAAPSPNEKKLDTKTKTTT 111

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022137569.11.72e-11899.44uncharacterized protein LOC111008986 [Momordica charantia][more]
XP_022137024.11.69e-1438.46uncharacterized protein LOC111008588 [Momordica charantia] >XP_022137025.1 uncha... [more]
XP_022137506.19.12e-0634.12uncharacterized protein LOC111008934 isoform X2 [Momordica charantia][more]
XP_022137505.19.33e-0634.12uncharacterized protein LOC111008934 isoform X1 [Momordica charantia][more]
XP_022994450.16.18e-0541.59sporozoite surface protein 2-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A6J1C7L78.33e-11999.44uncharacterized protein LOC111008986 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
A0A6J1C5Z88.17e-1538.46uncharacterized protein LOC111008588 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
A0A6J1C6T84.42e-0634.12uncharacterized protein LOC111008934 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1C6U34.52e-0634.12uncharacterized protein LOC111008934 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1K1792.99e-0541.59sporozoite surface protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111490168 PE... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..156
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..102

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC03g_new0377.1MC03g_new0377.1mRNA