Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAGGAATTCGACCCACCATCTAGTGATGATTTCGTCGACGAGGGACATGCAAGCGAGCAAGTGCTGCCTGCAATGGAAGGTCGTGAAGTGCAGCATGATGTCACCCATGTTGATCCTGATGTCCCGACCATGGATGCAAATGTACAAGGTAAGGTGAAGACCAAGAGTGGCAAGAAGCATCAGTGCAAATGCAAGTCAGGCTTGAGGATCCTGACTGAGCAGGTGGCTGCTATAGATACGTGGCTTGCCAGTGTGGAACAGGTAGTCACTTCTATAGACGATCACGTCGTTGGCGTGGAAGGTGATTTGAAAAGTATTCGGAAGTTCTTGCGTCATCTAGTTAAG GTGCGTACTCTATTAATGCTTTCTATATCTCAATTAATTTACTTAATGAATAAATTCATATAGGGTCTACCAGTTGATACTTCCGTTCTTCGAAGAAACATTGGTGGAGATGGAGATGACACTGGTGACGGAGATTCTGCAGGACTAGGAGGTGGTAGTAAGAGTCCGACAAATGACAAGGACAAACAGCGCGCCGGTGAAAATTAG mRNA sequence
ATGGAAAAGGAATTCGACCCACCATCTAGTGATGATTTCGTCGACGAGGGACATGCAAGCGAGCAAGTGCTGCCTGCAATGGAAGGTCGTGAAGTGCAGCATGATGTCACCCATGTTGATCCTGATGTCCCGACCATGGATGCAAATGTACAAGGTAAGGTGAAGACCAAGAGTGGCAAGAAGCATCAGTGCAAATGCAAGTCAGGCTTGAGGATCCTGACTGAGCAGGTGGCTGCTATAGATACGTGGCTTGCCAGTGTGGAACAGGTAGTCACTTCTATAGACGATCACGTCGTTGGCGTGGAAGGTGATTTGAAAAGTATTCGGAAGTTCTTGCGTCATCTAGTTAAGGGTCTACCAGTTGATACTTCCGTTCTTCGAAGAAACATTGGTGGAGATGGAGATGACACTGGTGACGGAGATTCTGCAGGACTAGGAGGTGGTAGTAAGAGTCCGACAAATGACAAGGACAAACAGCGCGCCGGTGAAAATTAG Coding sequence (CDS)
ATGGAAAAGGAATTCGACCCACCATCTAGTGATGATTTCGTCGACGAGGGACATGCAAGCGAGCAAGTGCTGCCTGCAATGGAAGGTCGTGAAGTGCAGCATGATGTCACCCATGTTGATCCTGATGTCCCGACCATGGATGCAAATGTACAAGGTAAGGTGAAGACCAAGAGTGGCAAGAAGCATCAGTGCAAATGCAAGTCAGGCTTGAGGATCCTGACTGAGCAGGTGGCTGCTATAGATACGTGGCTTGCCAGTGTGGAACAGGTAGTCACTTCTATAGACGATCACGTCGTTGGCGTGGAAGGTGATTTGAAAAGTATTCGGAAGTTCTTGCGTCATCTAGTTAAGGGTCTACCAGTTGATACTTCCGTTCTTCGAAGAAACATTGGTGGAGATGGAGATGACACTGGTGACGGAGATTCTGCAGGACTAGGAGGTGGTAGTAAGAGTCCGACAAATGACAAGGACAAACAGCGCGCCGGTGAAAATTAG Protein sequence
MEKEFDPPSSDDFVDEGHASEQVLPAMEGREVQHDVTHVDPDVPTMDANVQGKVKTKSGKKHQCKCKSGLRILTEQVAAIDTWLASVEQVVTSIDDHVVGVEGDLKSIRKFLRHLVKGLPVDTSVLRRNIGGDGDDTGDGDSAGLGGGSKSPTNDKDKQRAGEN
Homology
BLAST of MC03g_new0091 vs. NCBI nr
Match:
XP_022150329.1 (uncharacterized protein LOC111018527 [Momordica charantia] >XP_022150330.1 uncharacterized protein LOC111018527 [Momordica charantia])
HSP 1 Score: 94.7 bits (234), Expect = 1.18e-20
Identity = 56/92 (60.87%), Postives = 68/92 (73.91%), Query Frame = 0
Query: 57 KSGKKH--QCKCKSGLRILTEQVAAIDTWLASVEQVVTSIDDHVVGVEGDLKSIRKFLRH 116 K+GK+ + KCKS LR LT QVAAID LA VE+VV+S++D +EGDLK+IRKFLR Sbjct: 2 KTGKRSFSRYKCKSKLRALTGQVAAIDMRLAGVEEVVSSMNDRFNDMEGDLKTIRKFLRR 61 Query: 117 LVKGLPVDTSVLRRNIGGDGDDTGDGDSAGLG 146 LVKGLPVDTS LR+N GD D G+G + G G Sbjct: 62 LVKGLPVDTSKLRKNTNGDRDGNGNGYADGAG 93
BLAST of MC03g_new0091 vs. ExPASy TrEMBL
Match:
A0A6J1D868 (uncharacterized protein LOC111018527 OS=Momordica charantia OX=3673 GN=LOC111018527 PE=4 SV=1)
HSP 1 Score: 94.7 bits (234), Expect = 5.73e-21
Identity = 56/92 (60.87%), Postives = 68/92 (73.91%), Query Frame = 0
Query: 57 KSGKKH--QCKCKSGLRILTEQVAAIDTWLASVEQVVTSIDDHVVGVEGDLKSIRKFLRH 116 K+GK+ + KCKS LR LT QVAAID LA VE+VV+S++D +EGDLK+IRKFLR Sbjct: 2 KTGKRSFSRYKCKSKLRALTGQVAAIDMRLAGVEEVVSSMNDRFNDMEGDLKTIRKFLRR 61 Query: 117 LVKGLPVDTSVLRRNIGGDGDDTGDGDSAGLG 146 LVKGLPVDTS LR+N GD D G+G + G G Sbjct: 62 LVKGLPVDTSKLRKNTNGDRDGNGNGYADGAG 93
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
XP_022150329.1 1.18e-20 60.87 uncharacterized protein LOC111018527 [Momordica charantia] >XP_022150330.1 uncha... [more]
Match Name E-value Identity Description
A0A6J1D868 5.73e-21 60.87 uncharacterized protein LOC111018527 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
A T G G A A A A G G A A T T C G A C C C A C C A T C T A G T G A T G A T T T C G T C G A C G A G G G A C A T G C A A G C G A G C A A G T G C T G C C T G C A A T G G A A G G T C G T G A A G T G C A G C A T G A T G T C A C C C A T G T T G A T C C T G A T G T C C C G A C C A T G G A T G C A A A T G T A C A A G G T A A G G T G A A G A C C A A G A G T G G C A A G A A G C A T C A G T G C A A A T G C A A G T C A G G C T T G A G G A T C C T G A C T G A G C A G G T G G C T G C T A T A G A T A C G T G G C T T G C C A G T G T G G A A C A G G T A G T C A C T T C T A T A G A C G A T C A C G T C G T T G G C G T G G A A G G T G A T T T G A A A A G T A T T C G G A A G T T C T T G C G T C A T C T A G T T A A G G G T C T A C C A G T T G A T A C T T C C G T T C T T C G A A G A A A C A T T G G T G G A G A T G G A G A T G A C A C T G G T G A C G G A G A T T C T G C A G G A C T A G G A G G T G G T A G T A A G A G T C C G A C A A A T G A C A A G G A C A A A C A G C G C G C C G G T G A A A A T T A G 50 100 150 200 250 300 350 400 450 Score = Score = Score = Sequence mobidb-lite mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 130..164
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..18
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..47
Relationships
The following mRNA feature(s) are a part of this gene: