Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: utr5CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGAGACAGAACAGAATCAAACATGAGTTCACTCCGATTTCCCCCTCCACTGGTTTCGCCATGGAAGAAGAAGAAGAAGAAGAACAACCACTCCCCAGGCTCCAACCAAACCTCTCTCCCTTCCATGGCCGCTCTTCAAAATTCAGACCAAAAACCAATACTCCTCTCTCATCTTCTTTCTTTCGCCCTCTCCGTAACCCTCAGCTCCCCCTTCCCTTCTCTCGCAATCCCTTCTCTTAATTCCCTGTCCTCTCCACTTTCTCCCACCACTCCATTTTCTCAATCCAAGAACTTACAAATCGGACTAGAAAACGGGTACGCTCTCAACTTCTCTGGTTAATTCCTCGATTCCTTTTGTAGTTTTCTCTTAACTTTTTCTTTTCCATTGGATTTATTCATTTTTGTAATAATTTTCATTCTGCCCTAATTTTATGCACAATGCGGCATAAATCCCCCAATGTTGCCGTTTTTGTTGCAGGAAAATTCGGCCCTGCCCATCCACCAATCCGGCCTGTGTCTCCACAAATCCTAAATCGTCATCCTTCGCCTTCCCTTTAAGCATTCCCGAAAATTTTACTGAAAATCCAATTCAGGTCTTATTTCTCTGAAAACTGTGCACTTCATTGTCGTTCTAGATTATTGGTTTCTCTTGGTTTTGCTTTCCATGTTTCAGCTCTACTTAATTCATTTGCAGAAGCTGCAGGAAGTGATCCTCAAAACGCAGAGAAACGCAAAAATTCAGGTGGTGGAAGATACCCCATATGGTAATTGAACTGAACTTACCTAATAGCAGTTTTGAACTTTACATTACGAATTGATATACACATGCCTCGTTAAACTGCTGAGATTGGGATGAGAATGGATTCTATACGCATAGGGAATCGCCCTCTTTAGGAGCAGAGCCAAACATTTTCACGGAGTGGCAAAATTTTATATTTTAACTTTCTATATATATTATATAGTTTGACCCTTTATCATCCAAGACATGCTTTACCTTTTCGCAAAACAAAACGCCTTGCATTAGGCTCACTTCGCCACTCCAAGTGACAACAAAAGTTCTAAGTTACTAAGGCTTGAATCCAGGATTTCATCCCAAGCCCTTACCTCCAGAGCAGCCTTTTAAGGGTGTGCTTTGATATAATATTAGAACCATAGATCCTTAGATGAAATTCTTGTAAATTTGCTTCCTTCCCCTTCATATTAATAGTTCACGTGTTAGATCTAAATACTTATATCCCGAGCCGACTCGTAAGAGGAGGATGCTTTTGCTTATACAACAACATGATAACCACCAGGTCAGTATTTAGAGGCTGAGGTTGATGGGAACTTTGGACGAGATGTGATTGAGTTTCTGGTGAAAGGAGATGTGGTTGCTTATAGAACCATGGCAACAAAAGTGACTTATGTGTATCCCTTCACTACTGCTTTTGGAGACTCCAAGGGACAGGAAGAAAGAATGAAGAAGATCATAGACAACTTGGGTTGGTATTCTCCAACCTTCGATTCCATGGAT
mRNA sequence
CGGAGACAGAACAGAATCAAACATGAGTTCACTCCGATTTCCCCCTCCACTGGTTTCGCCATGGAAGAAGAAGAAGAAGAAGAACAACCACTCCCCAGGCTCCAACCAAACCTCTCTCCCTTCCATGGCCGCTCTTCAAAATTCAGACCAAAAACCAATACTCCTCTCTCATCTTCTTTCTTTCGCCCTCTCCGTAACCCTCAGCTCCCCCTTCCCTTCTCTCGCAATCCCTTCTCTTAATTCCCTGTCCTCTCCACTTTCTCCCACCACTCCATTTTCTCAATCCAAGAACTTACAAATCGGACTAGAAAACGGGAAAATTCGGCCCTGCCCATCCACCAATCCGGCCTGTGTCTCCACAAATCCTAAATCGTCATCCTTCGCCTTCCCTTTAAGCATTCCCGAAAATTTTACTGAAAATCCAATTCAGAAGCTGCAGGAAGTGATCCTCAAAACGCAGAGAAACGCAAAAATTCAGGTGGTGGAAGATACCCCATATGGTCAGTATTTAGAGGCTGAGGTTGATGGGAACTTTGGACGAGATGTGATTGAGTTTCTGGTGAAAGGAGATGTGGTTGCTTATAGAACCATGGCAACAAAAGTGACTTATGTGTATCCCTTCACTACTGCTTTTGGAGACTCCAAGGGACAGGAAGAAAGAATGAAGAAGATCATAGACAACTTGGGTTGGTATTCTCCAACCTTCGATTCCATGGAT
Coding sequence (CDS)
ATGAGTTCACTCCGATTTCCCCCTCCACTGGTTTCGCCATGGAAGAAGAAGAAGAAGAAGAACAACCACTCCCCAGGCTCCAACCAAACCTCTCTCCCTTCCATGGCCGCTCTTCAAAATTCAGACCAAAAACCAATACTCCTCTCTCATCTTCTTTCTTTCGCCCTCTCCGTAACCCTCAGCTCCCCCTTCCCTTCTCTCGCAATCCCTTCTCTTAATTCCCTGTCCTCTCCACTTTCTCCCACCACTCCATTTTCTCAATCCAAGAACTTACAAATCGGACTAGAAAACGGGAAAATTCGGCCCTGCCCATCCACCAATCCGGCCTGTGTCTCCACAAATCCTAAATCGTCATCCTTCGCCTTCCCTTTAAGCATTCCCGAAAATTTTACTGAAAATCCAATTCAGAAGCTGCAGGAAGTGATCCTCAAAACGCAGAGAAACGCAAAAATTCAGGTGGTGGAAGATACCCCATATGGTCAGTATTTAGAGGCTGAGGTTGATGGGAACTTTGGACGAGATGTGATTGAGTTTCTGGTGAAAGGAGATGTGGTTGCTTATAGAACCATGGCAACAAAAGTGACTTATGTGTATCCCTTCACTACTGCTTTTGGAGACTCCAAGGGACAGGAAGAAAGAATGAAGAAGATCATAGACAACTTGGGTTGGTATTCTCCAACCTTCGATTCCATGGAT
Protein sequence
MSSLRFPPPLVSPWKKKKKKNNHSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVTLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSSFAFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVKGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD
Homology
BLAST of MC03g0947 vs. ExPASy Swiss-Prot
Match:
Q9SW33 (Thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g24930 PE=1 SV=1)
HSP 1 Score: 259.6 bits (662), Expect = 3.3e-68
Identity = 136/195 (69.74%), Postives = 165/195 (84.62%), Query Frame = 0
Query: 40 NSDQKPI-LLSHLLSFALSVTLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENG 99
+S PI LL L+SFAL+++L+S P+LAIPSL+S S PL TTPF+QSK +Q GL NG
Sbjct: 34 SSTSPPISLLPKLISFALAISLTSFSPALAIPSLSS-SQPL--TTPFTQSKFVQTGLLNG 93
Query: 100 KIRPCPSTNPACVSTNPKSSSFAFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTP 159
KIRPCPSTNP CVSTNP SSSF+FPL+IPE T++PI+KL+E I+ TQ+N K V+EDTP
Sbjct: 94 KIRPCPSTNPGCVSTNPTSSSFSFPLTIPETDTQDPIEKLKEAIMSTQKNPKFVVLEDTP 153
Query: 160 YGQYLEAEVD-GNFGRDVIEFLVKGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKI 219
YG+Y+EAEV+ G F RDV+EFLVK DVVAYR MATKVT+VYPFTTAFGDSKGQEER+KK+
Sbjct: 154 YGRYVEAEVEGGGFSRDVMEFLVKQDVVAYRCMATKVTFVYPFTTAFGDSKGQEERLKKL 213
Query: 220 IDNLGWYSPTFDSMD 233
ID LGWY+PTF+SM+
Sbjct: 214 IDQLGWYAPTFESME 225
BLAST of MC03g0947 vs. NCBI nr
Match:
XP_022137359.1 (thylakoid lumenal 17.9 kDa protein, chloroplastic-like isoform X3 [Momordica charantia])
HSP 1 Score: 455 bits (1170), Expect = 3.49e-161
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0
Query: 1 MSSLRFPPPLVSPWKKKKKKNNHSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVTL 60
MSSLRFPPPLVSPWKKKKKKNNHSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVTL
Sbjct: 1 MSSLRFPPPLVSPWKKKKKKNNHSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVTL 60
Query: 61 SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSSF 120
SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSSF
Sbjct: 61 SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSSF 120
Query: 121 AFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
AFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV
Sbjct: 121 AFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
Query: 181 KGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD 232
KGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD
Sbjct: 181 KGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD 232
BLAST of MC03g0947 vs. NCBI nr
Match:
XP_038893869.1 (thylakoid lumenal 17.9 kDa protein, chloroplastic [Benincasa hispida])
HSP 1 Score: 389 bits (999), Expect = 3.62e-135
Identity = 202/233 (86.70%), Postives = 211/233 (90.56%), Query Frame = 0
Query: 1 MSSLRFPPPLVSPWKKKKKKNN-HSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVT 60
MSSL+F PPLVSPWKKKKKKN HSP S PSMAALQNS+ KPI LSH+LSFALS+T
Sbjct: 1 MSSLQFRPPLVSPWKKKKKKNQYHSPNS----FPSMAALQNSNHKPIFLSHILSFALSIT 60
Query: 61 LSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSS 120
LSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNL GLENGKI PCPSTNP+CVSTNPKSSS
Sbjct: 61 LSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSS 120
Query: 121 FAFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFL 180
FAFPL+IPENF+ NPIQKLQE IL+TQRN KIQVVEDTPYGQYLEAEVDGNFGRDVIEFL
Sbjct: 121 FAFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFL 180
Query: 181 VKGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD 232
VKGDV AYR MATKVTYVYPFTTA GDSKGQEERM+KIID L WYSPTFDSMD
Sbjct: 181 VKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLNWYSPTFDSMD 229
BLAST of MC03g0947 vs. NCBI nr
Match:
XP_008439847.1 (PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis melo] >KAA0055338.1 thylakoid lumenal 17.9 kDa protein [Cucumis melo var. makuwa] >TYJ99264.1 thylakoid lumenal 17.9 kDa protein [Cucumis melo var. makuwa])
HSP 1 Score: 375 bits (962), Expect = 1.75e-129
Identity = 191/232 (82.33%), Postives = 207/232 (89.22%), Query Frame = 0
Query: 1 MSSLRFPPPLVSPWKKKKKKNNHSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVTL 60
MSSL+F P LVSPWKKK NN + + S+PSM+ALQN + KPI LSHLLSFALS+TL
Sbjct: 1 MSSLQFRPLLVSPWKKKDNNNNKNQYHSPVSVPSMSALQNVNHKPIFLSHLLSFALSITL 60
Query: 61 SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSSF 120
+SPFPS+AIPSLNSLSSPLSPTTPFSQSKNL GLENGKI PCPSTNP+CVSTNPKSSSF
Sbjct: 61 TSPFPSVAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120
Query: 121 AFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
AFPL+IP+NF+ NPIQKLQE IL+TQRN KIQ+VEDTPYGQYLEAEVDGNFGRDVIEFLV
Sbjct: 121 AFPLNIPDNFSGNPIQKLQEAILETQRNPKIQMVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
Query: 181 KGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD 232
KGDV AYR MATKVTYVYPFTTA GDSKGQEERM+KIID L WYSPTFDSMD
Sbjct: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMD 232
BLAST of MC03g0947 vs. NCBI nr
Match:
XP_004154123.1 (thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis sativus] >KGN64418.1 hypothetical protein Csa_013578 [Cucumis sativus])
HSP 1 Score: 374 bits (959), Expect = 4.83e-129
Identity = 193/235 (82.13%), Postives = 207/235 (88.09%), Query Frame = 0
Query: 1 MSSLRFPPPLVSPWKKKKKKNN---HSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALS 60
MSSL+F PPLVSPWKKK N HSP S+PSM+ LQN++ KPI LSHLLSFALS
Sbjct: 1 MSSLQFRPPLVSPWKKKDNNNKNQYHSP----VSVPSMSTLQNANHKPIFLSHLLSFALS 60
Query: 61 VTLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKS 120
+TLSSPFPS+AIPSLNSLSSPLSPTTPFSQSKNL GLENGKI PCPS NP+CVSTNPKS
Sbjct: 61 ITLSSPFPSIAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSANPSCVSTNPKS 120
Query: 121 SSFAFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIE 180
SSFAFPL+IP+NF+ NPIQKLQE IL+TQRN KIQVVEDTPYGQYLEAEVDGNFGRDVIE
Sbjct: 121 SSFAFPLNIPDNFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIE 180
Query: 181 FLVKGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD 232
FLV+GDV AYR MATKVTYVYPFTTA GDSKGQEERM+KIID L WYSPTFDSMD
Sbjct: 181 FLVRGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMD 231
BLAST of MC03g0947 vs. NCBI nr
Match:
KAG7012320.1 (Thylakoid lumenal 17.9 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 371 bits (953), Expect = 4.25e-128
Identity = 192/232 (82.76%), Postives = 207/232 (89.22%), Query Frame = 0
Query: 1 MSSLRFPPPLVSPWKKKKKKNNH-SPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVT 60
MSSL F P LVSPWKKKK N S N+TS PSMAAL N + KPI +SHLLSFALS+T
Sbjct: 1 MSSLHFRPALVSPWKKKKNNNQFLSAVLNRTSPPSMAALPNPNHKPIFISHLLSFALSIT 60
Query: 61 LSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSS 120
L+SPFPSLAIPS NSLSSPLSPTTPFSQSK+L IGLENGKIRPCPSTNP+CVSTNPKSSS
Sbjct: 61 LTSPFPSLAIPSFNSLSSPLSPTTPFSQSKDLPIGLENGKIRPCPSTNPSCVSTNPKSSS 120
Query: 121 FAFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFL 180
FAFPLSIPE++T NPIQKLQEVIL+TQRNAKIQ+VEDTPYGQY+EAEVDGNFGRDVIEFL
Sbjct: 121 FAFPLSIPESYTGNPIQKLQEVILETQRNAKIQMVEDTPYGQYMEAEVDGNFGRDVIEFL 180
Query: 181 VKGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSM 231
V+GDV AYR MA KVTYVYPFTTA GDSKGQEERMKKII+ L WYSPTF+SM
Sbjct: 181 VRGDVAAYRIMAAKVTYVYPFTTALGDSKGQEERMKKIIEELDWYSPTFESM 232
BLAST of MC03g0947 vs. ExPASy TrEMBL
Match:
A0A6J1C708 (thylakoid lumenal 17.9 kDa protein, chloroplastic-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111008832 PE=4 SV=1)
HSP 1 Score: 455 bits (1170), Expect = 1.69e-161
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0
Query: 1 MSSLRFPPPLVSPWKKKKKKNNHSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVTL 60
MSSLRFPPPLVSPWKKKKKKNNHSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVTL
Sbjct: 1 MSSLRFPPPLVSPWKKKKKKNNHSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVTL 60
Query: 61 SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSSF 120
SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSSF
Sbjct: 61 SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSSF 120
Query: 121 AFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
AFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV
Sbjct: 121 AFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
Query: 181 KGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD 232
KGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD
Sbjct: 181 KGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD 232
BLAST of MC03g0947 vs. ExPASy TrEMBL
Match:
A0A5A7UK02 (Thylakoid lumenal 17.9 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004760 PE=4 SV=1)
HSP 1 Score: 375 bits (962), Expect = 8.46e-130
Identity = 191/232 (82.33%), Postives = 207/232 (89.22%), Query Frame = 0
Query: 1 MSSLRFPPPLVSPWKKKKKKNNHSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVTL 60
MSSL+F P LVSPWKKK NN + + S+PSM+ALQN + KPI LSHLLSFALS+TL
Sbjct: 1 MSSLQFRPLLVSPWKKKDNNNNKNQYHSPVSVPSMSALQNVNHKPIFLSHLLSFALSITL 60
Query: 61 SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSSF 120
+SPFPS+AIPSLNSLSSPLSPTTPFSQSKNL GLENGKI PCPSTNP+CVSTNPKSSSF
Sbjct: 61 TSPFPSVAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120
Query: 121 AFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
AFPL+IP+NF+ NPIQKLQE IL+TQRN KIQ+VEDTPYGQYLEAEVDGNFGRDVIEFLV
Sbjct: 121 AFPLNIPDNFSGNPIQKLQEAILETQRNPKIQMVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
Query: 181 KGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD 232
KGDV AYR MATKVTYVYPFTTA GDSKGQEERM+KIID L WYSPTFDSMD
Sbjct: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMD 232
BLAST of MC03g0947 vs. ExPASy TrEMBL
Match:
A0A1S3AZP3 (thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484512 PE=4 SV=1)
HSP 1 Score: 375 bits (962), Expect = 8.46e-130
Identity = 191/232 (82.33%), Postives = 207/232 (89.22%), Query Frame = 0
Query: 1 MSSLRFPPPLVSPWKKKKKKNNHSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVTL 60
MSSL+F P LVSPWKKK NN + + S+PSM+ALQN + KPI LSHLLSFALS+TL
Sbjct: 1 MSSLQFRPLLVSPWKKKDNNNNKNQYHSPVSVPSMSALQNVNHKPIFLSHLLSFALSITL 60
Query: 61 SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSSF 120
+SPFPS+AIPSLNSLSSPLSPTTPFSQSKNL GLENGKI PCPSTNP+CVSTNPKSSSF
Sbjct: 61 TSPFPSVAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120
Query: 121 AFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
AFPL+IP+NF+ NPIQKLQE IL+TQRN KIQ+VEDTPYGQYLEAEVDGNFGRDVIEFLV
Sbjct: 121 AFPLNIPDNFSGNPIQKLQEAILETQRNPKIQMVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
Query: 181 KGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD 232
KGDV AYR MATKVTYVYPFTTA GDSKGQEERM+KIID L WYSPTFDSMD
Sbjct: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMD 232
BLAST of MC03g0947 vs. ExPASy TrEMBL
Match:
A0A0A0LRK9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050570 PE=4 SV=1)
HSP 1 Score: 374 bits (959), Expect = 2.34e-129
Identity = 193/235 (82.13%), Postives = 207/235 (88.09%), Query Frame = 0
Query: 1 MSSLRFPPPLVSPWKKKKKKNN---HSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALS 60
MSSL+F PPLVSPWKKK N HSP S+PSM+ LQN++ KPI LSHLLSFALS
Sbjct: 1 MSSLQFRPPLVSPWKKKDNNNKNQYHSP----VSVPSMSTLQNANHKPIFLSHLLSFALS 60
Query: 61 VTLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKS 120
+TLSSPFPS+AIPSLNSLSSPLSPTTPFSQSKNL GLENGKI PCPS NP+CVSTNPKS
Sbjct: 61 ITLSSPFPSIAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSANPSCVSTNPKS 120
Query: 121 SSFAFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIE 180
SSFAFPL+IP+NF+ NPIQKLQE IL+TQRN KIQVVEDTPYGQYLEAEVDGNFGRDVIE
Sbjct: 121 SSFAFPLNIPDNFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIE 180
Query: 181 FLVKGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD 232
FLV+GDV AYR MATKVTYVYPFTTA GDSKGQEERM+KIID L WYSPTFDSMD
Sbjct: 181 FLVRGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMD 231
BLAST of MC03g0947 vs. ExPASy TrEMBL
Match:
A0A6J1GT70 (thylakoid lumenal 17.9 kDa protein, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457250 PE=4 SV=1)
HSP 1 Score: 371 bits (953), Expect = 2.06e-128
Identity = 193/232 (83.19%), Postives = 207/232 (89.22%), Query Frame = 0
Query: 1 MSSLRFPPPLVSPWKKKKKKNNH-SPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVT 60
MSSL F P LVSPWKKKKK N S N+TS PSMAAL N + KPI +SHLLSFALS+T
Sbjct: 1 MSSLHFRPALVSPWKKKKKNNQFLSAVLNRTSPPSMAALPNPNHKPIFISHLLSFALSIT 60
Query: 61 LSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSS 120
L+SPFPSLAIPS NSLSSPLSPTTPFSQSK+L IGLENGKIRPCPSTNP+CVSTNPKSSS
Sbjct: 61 LTSPFPSLAIPSFNSLSSPLSPTTPFSQSKDLPIGLENGKIRPCPSTNPSCVSTNPKSSS 120
Query: 121 FAFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFL 180
FAF LSIPE+FT NPIQKLQEVIL+TQRNAKIQ+VEDTPYGQY+EAEVDGNFGRDVIEFL
Sbjct: 121 FAFSLSIPESFTGNPIQKLQEVILETQRNAKIQMVEDTPYGQYMEAEVDGNFGRDVIEFL 180
Query: 181 VKGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSM 231
V+GDV AYR MA KVTYVYPFTTA GDSKGQEERMKKII+ L WYSPTF+SM
Sbjct: 181 VRGDVAAYRIMAAKVTYVYPFTTALGDSKGQEERMKKIIEELDWYSPTFESM 232
BLAST of MC03g0947 vs. TAIR 10
Match:
AT4G24930.1 (thylakoid lumenal 17.9 kDa protein, chloroplast )
HSP 1 Score: 259.6 bits (662), Expect = 2.4e-69
Identity = 136/195 (69.74%), Postives = 165/195 (84.62%), Query Frame = 0
Query: 40 NSDQKPI-LLSHLLSFALSVTLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENG 99
+S PI LL L+SFAL+++L+S P+LAIPSL+S S PL TTPF+QSK +Q GL NG
Sbjct: 34 SSTSPPISLLPKLISFALAISLTSFSPALAIPSLSS-SQPL--TTPFTQSKFVQTGLLNG 93
Query: 100 KIRPCPSTNPACVSTNPKSSSFAFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTP 159
KIRPCPSTNP CVSTNP SSSF+FPL+IPE T++PI+KL+E I+ TQ+N K V+EDTP
Sbjct: 94 KIRPCPSTNPGCVSTNPTSSSFSFPLTIPETDTQDPIEKLKEAIMSTQKNPKFVVLEDTP 153
Query: 160 YGQYLEAEVD-GNFGRDVIEFLVKGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKI 219
YG+Y+EAEV+ G F RDV+EFLVK DVVAYR MATKVT+VYPFTTAFGDSKGQEER+KK+
Sbjct: 154 YGRYVEAEVEGGGFSRDVMEFLVKQDVVAYRCMATKVTFVYPFTTAFGDSKGQEERLKKL 213
Query: 220 IDNLGWYSPTFDSMD 233
ID LGWY+PTF+SM+
Sbjct: 214 IDQLGWYAPTFESME 225
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9SW33 | 3.3e-68 | 69.74 | Thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=370... | [more] |
Match Name | E-value | Identity | Description | |
XP_022137359.1 | 3.49e-161 | 100.00 | thylakoid lumenal 17.9 kDa protein, chloroplastic-like isoform X3 [Momordica cha... | [more] |
XP_038893869.1 | 3.62e-135 | 86.70 | thylakoid lumenal 17.9 kDa protein, chloroplastic [Benincasa hispida] | [more] |
XP_008439847.1 | 1.75e-129 | 82.33 | PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis melo] >KAA... | [more] |
XP_004154123.1 | 4.83e-129 | 82.13 | thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis sativus] >KGN64418.1 ... | [more] |
KAG7012320.1 | 4.25e-128 | 82.76 | Thylakoid lumenal 17.9 kDa protein, chloroplastic, partial [Cucurbita argyrosper... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1C708 | 1.69e-161 | 100.00 | thylakoid lumenal 17.9 kDa protein, chloroplastic-like isoform X3 OS=Momordica c... | [more] |
A0A5A7UK02 | 8.46e-130 | 82.33 | Thylakoid lumenal 17.9 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56... | [more] |
A0A1S3AZP3 | 8.46e-130 | 82.33 | thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC... | [more] |
A0A0A0LRK9 | 2.34e-129 | 82.13 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050570 PE=4 SV=1 | [more] |
A0A6J1GT70 | 2.06e-128 | 83.19 | thylakoid lumenal 17.9 kDa protein, chloroplastic isoform X2 OS=Cucurbita moscha... | [more] |
Match Name | E-value | Identity | Description | |
AT4G24930.1 | 2.4e-69 | 69.74 | thylakoid lumenal 17.9 kDa protein, chloroplast | [more] |