MC03g0947 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC03g0947
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionthylakoid lumenal 17.9 kDa protein, chloroplastic
LocationMC03: 16111325 .. 16112837 (+)
RNA-Seq ExpressionMC03g0947
SyntenyMC03g0947
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGAGACAGAACAGAATCAAACATGAGTTCACTCCGATTTCCCCCTCCACTGGTTTCGCCATGGAAGAAGAAGAAGAAGAAGAACAACCACTCCCCAGGCTCCAACCAAACCTCTCTCCCTTCCATGGCCGCTCTTCAAAATTCAGACCAAAAACCAATACTCCTCTCTCATCTTCTTTCTTTCGCCCTCTCCGTAACCCTCAGCTCCCCCTTCCCTTCTCTCGCAATCCCTTCTCTTAATTCCCTGTCCTCTCCACTTTCTCCCACCACTCCATTTTCTCAATCCAAGAACTTACAAATCGGACTAGAAAACGGGTACGCTCTCAACTTCTCTGGTTAATTCCTCGATTCCTTTTGTAGTTTTCTCTTAACTTTTTCTTTTCCATTGGATTTATTCATTTTTGTAATAATTTTCATTCTGCCCTAATTTTATGCACAATGCGGCATAAATCCCCCAATGTTGCCGTTTTTGTTGCAGGAAAATTCGGCCCTGCCCATCCACCAATCCGGCCTGTGTCTCCACAAATCCTAAATCGTCATCCTTCGCCTTCCCTTTAAGCATTCCCGAAAATTTTACTGAAAATCCAATTCAGGTCTTATTTCTCTGAAAACTGTGCACTTCATTGTCGTTCTAGATTATTGGTTTCTCTTGGTTTTGCTTTCCATGTTTCAGCTCTACTTAATTCATTTGCAGAAGCTGCAGGAAGTGATCCTCAAAACGCAGAGAAACGCAAAAATTCAGGTGGTGGAAGATACCCCATATGGTAATTGAACTGAACTTACCTAATAGCAGTTTTGAACTTTACATTACGAATTGATATACACATGCCTCGTTAAACTGCTGAGATTGGGATGAGAATGGATTCTATACGCATAGGGAATCGCCCTCTTTAGGAGCAGAGCCAAACATTTTCACGGAGTGGCAAAATTTTATATTTTAACTTTCTATATATATTATATAGTTTGACCCTTTATCATCCAAGACATGCTTTACCTTTTCGCAAAACAAAACGCCTTGCATTAGGCTCACTTCGCCACTCCAAGTGACAACAAAAGTTCTAAGTTACTAAGGCTTGAATCCAGGATTTCATCCCAAGCCCTTACCTCCAGAGCAGCCTTTTAAGGGTGTGCTTTGATATAATATTAGAACCATAGATCCTTAGATGAAATTCTTGTAAATTTGCTTCCTTCCCCTTCATATTAATAGTTCACGTGTTAGATCTAAATACTTATATCCCGAGCCGACTCGTAAGAGGAGGATGCTTTTGCTTATACAACAACATGATAACCACCAGGTCAGTATTTAGAGGCTGAGGTTGATGGGAACTTTGGACGAGATGTGATTGAGTTTCTGGTGAAAGGAGATGTGGTTGCTTATAGAACCATGGCAACAAAAGTGACTTATGTGTATCCCTTCACTACTGCTTTTGGAGACTCCAAGGGACAGGAAGAAAGAATGAAGAAGATCATAGACAACTTGGGTTGGTATTCTCCAACCTTCGATTCCATGGAT

mRNA sequence

CGGAGACAGAACAGAATCAAACATGAGTTCACTCCGATTTCCCCCTCCACTGGTTTCGCCATGGAAGAAGAAGAAGAAGAAGAACAACCACTCCCCAGGCTCCAACCAAACCTCTCTCCCTTCCATGGCCGCTCTTCAAAATTCAGACCAAAAACCAATACTCCTCTCTCATCTTCTTTCTTTCGCCCTCTCCGTAACCCTCAGCTCCCCCTTCCCTTCTCTCGCAATCCCTTCTCTTAATTCCCTGTCCTCTCCACTTTCTCCCACCACTCCATTTTCTCAATCCAAGAACTTACAAATCGGACTAGAAAACGGGAAAATTCGGCCCTGCCCATCCACCAATCCGGCCTGTGTCTCCACAAATCCTAAATCGTCATCCTTCGCCTTCCCTTTAAGCATTCCCGAAAATTTTACTGAAAATCCAATTCAGAAGCTGCAGGAAGTGATCCTCAAAACGCAGAGAAACGCAAAAATTCAGGTGGTGGAAGATACCCCATATGGTCAGTATTTAGAGGCTGAGGTTGATGGGAACTTTGGACGAGATGTGATTGAGTTTCTGGTGAAAGGAGATGTGGTTGCTTATAGAACCATGGCAACAAAAGTGACTTATGTGTATCCCTTCACTACTGCTTTTGGAGACTCCAAGGGACAGGAAGAAAGAATGAAGAAGATCATAGACAACTTGGGTTGGTATTCTCCAACCTTCGATTCCATGGAT

Coding sequence (CDS)

ATGAGTTCACTCCGATTTCCCCCTCCACTGGTTTCGCCATGGAAGAAGAAGAAGAAGAAGAACAACCACTCCCCAGGCTCCAACCAAACCTCTCTCCCTTCCATGGCCGCTCTTCAAAATTCAGACCAAAAACCAATACTCCTCTCTCATCTTCTTTCTTTCGCCCTCTCCGTAACCCTCAGCTCCCCCTTCCCTTCTCTCGCAATCCCTTCTCTTAATTCCCTGTCCTCTCCACTTTCTCCCACCACTCCATTTTCTCAATCCAAGAACTTACAAATCGGACTAGAAAACGGGAAAATTCGGCCCTGCCCATCCACCAATCCGGCCTGTGTCTCCACAAATCCTAAATCGTCATCCTTCGCCTTCCCTTTAAGCATTCCCGAAAATTTTACTGAAAATCCAATTCAGAAGCTGCAGGAAGTGATCCTCAAAACGCAGAGAAACGCAAAAATTCAGGTGGTGGAAGATACCCCATATGGTCAGTATTTAGAGGCTGAGGTTGATGGGAACTTTGGACGAGATGTGATTGAGTTTCTGGTGAAAGGAGATGTGGTTGCTTATAGAACCATGGCAACAAAAGTGACTTATGTGTATCCCTTCACTACTGCTTTTGGAGACTCCAAGGGACAGGAAGAAAGAATGAAGAAGATCATAGACAACTTGGGTTGGTATTCTCCAACCTTCGATTCCATGGAT

Protein sequence

MSSLRFPPPLVSPWKKKKKKNNHSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVTLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSSFAFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVKGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD
Homology
BLAST of MC03g0947 vs. ExPASy Swiss-Prot
Match: Q9SW33 (Thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g24930 PE=1 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 3.3e-68
Identity = 136/195 (69.74%), Postives = 165/195 (84.62%), Query Frame = 0

Query: 40  NSDQKPI-LLSHLLSFALSVTLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENG 99
           +S   PI LL  L+SFAL+++L+S  P+LAIPSL+S S PL  TTPF+QSK +Q GL NG
Sbjct: 34  SSTSPPISLLPKLISFALAISLTSFSPALAIPSLSS-SQPL--TTPFTQSKFVQTGLLNG 93

Query: 100 KIRPCPSTNPACVSTNPKSSSFAFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTP 159
           KIRPCPSTNP CVSTNP SSSF+FPL+IPE  T++PI+KL+E I+ TQ+N K  V+EDTP
Sbjct: 94  KIRPCPSTNPGCVSTNPTSSSFSFPLTIPETDTQDPIEKLKEAIMSTQKNPKFVVLEDTP 153

Query: 160 YGQYLEAEVD-GNFGRDVIEFLVKGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKI 219
           YG+Y+EAEV+ G F RDV+EFLVK DVVAYR MATKVT+VYPFTTAFGDSKGQEER+KK+
Sbjct: 154 YGRYVEAEVEGGGFSRDVMEFLVKQDVVAYRCMATKVTFVYPFTTAFGDSKGQEERLKKL 213

Query: 220 IDNLGWYSPTFDSMD 233
           ID LGWY+PTF+SM+
Sbjct: 214 IDQLGWYAPTFESME 225

BLAST of MC03g0947 vs. NCBI nr
Match: XP_022137359.1 (thylakoid lumenal 17.9 kDa protein, chloroplastic-like isoform X3 [Momordica charantia])

HSP 1 Score: 455 bits (1170), Expect = 3.49e-161
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0

Query: 1   MSSLRFPPPLVSPWKKKKKKNNHSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVTL 60
           MSSLRFPPPLVSPWKKKKKKNNHSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVTL
Sbjct: 1   MSSLRFPPPLVSPWKKKKKKNNHSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVTL 60

Query: 61  SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSSF 120
           SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSSF
Sbjct: 61  SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSSF 120

Query: 121 AFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
           AFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV
Sbjct: 121 AFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180

Query: 181 KGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD 232
           KGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD
Sbjct: 181 KGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD 232

BLAST of MC03g0947 vs. NCBI nr
Match: XP_038893869.1 (thylakoid lumenal 17.9 kDa protein, chloroplastic [Benincasa hispida])

HSP 1 Score: 389 bits (999), Expect = 3.62e-135
Identity = 202/233 (86.70%), Postives = 211/233 (90.56%), Query Frame = 0

Query: 1   MSSLRFPPPLVSPWKKKKKKNN-HSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVT 60
           MSSL+F PPLVSPWKKKKKKN  HSP S     PSMAALQNS+ KPI LSH+LSFALS+T
Sbjct: 1   MSSLQFRPPLVSPWKKKKKKNQYHSPNS----FPSMAALQNSNHKPIFLSHILSFALSIT 60

Query: 61  LSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSS 120
           LSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNL  GLENGKI PCPSTNP+CVSTNPKSSS
Sbjct: 61  LSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSS 120

Query: 121 FAFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFL 180
           FAFPL+IPENF+ NPIQKLQE IL+TQRN KIQVVEDTPYGQYLEAEVDGNFGRDVIEFL
Sbjct: 121 FAFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFL 180

Query: 181 VKGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD 232
           VKGDV AYR MATKVTYVYPFTTA GDSKGQEERM+KIID L WYSPTFDSMD
Sbjct: 181 VKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLNWYSPTFDSMD 229

BLAST of MC03g0947 vs. NCBI nr
Match: XP_008439847.1 (PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis melo] >KAA0055338.1 thylakoid lumenal 17.9 kDa protein [Cucumis melo var. makuwa] >TYJ99264.1 thylakoid lumenal 17.9 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 375 bits (962), Expect = 1.75e-129
Identity = 191/232 (82.33%), Postives = 207/232 (89.22%), Query Frame = 0

Query: 1   MSSLRFPPPLVSPWKKKKKKNNHSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVTL 60
           MSSL+F P LVSPWKKK   NN +   +  S+PSM+ALQN + KPI LSHLLSFALS+TL
Sbjct: 1   MSSLQFRPLLVSPWKKKDNNNNKNQYHSPVSVPSMSALQNVNHKPIFLSHLLSFALSITL 60

Query: 61  SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSSF 120
           +SPFPS+AIPSLNSLSSPLSPTTPFSQSKNL  GLENGKI PCPSTNP+CVSTNPKSSSF
Sbjct: 61  TSPFPSVAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120

Query: 121 AFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
           AFPL+IP+NF+ NPIQKLQE IL+TQRN KIQ+VEDTPYGQYLEAEVDGNFGRDVIEFLV
Sbjct: 121 AFPLNIPDNFSGNPIQKLQEAILETQRNPKIQMVEDTPYGQYLEAEVDGNFGRDVIEFLV 180

Query: 181 KGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD 232
           KGDV AYR MATKVTYVYPFTTA GDSKGQEERM+KIID L WYSPTFDSMD
Sbjct: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMD 232

BLAST of MC03g0947 vs. NCBI nr
Match: XP_004154123.1 (thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis sativus] >KGN64418.1 hypothetical protein Csa_013578 [Cucumis sativus])

HSP 1 Score: 374 bits (959), Expect = 4.83e-129
Identity = 193/235 (82.13%), Postives = 207/235 (88.09%), Query Frame = 0

Query: 1   MSSLRFPPPLVSPWKKKKKKNN---HSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALS 60
           MSSL+F PPLVSPWKKK   N    HSP     S+PSM+ LQN++ KPI LSHLLSFALS
Sbjct: 1   MSSLQFRPPLVSPWKKKDNNNKNQYHSP----VSVPSMSTLQNANHKPIFLSHLLSFALS 60

Query: 61  VTLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKS 120
           +TLSSPFPS+AIPSLNSLSSPLSPTTPFSQSKNL  GLENGKI PCPS NP+CVSTNPKS
Sbjct: 61  ITLSSPFPSIAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSANPSCVSTNPKS 120

Query: 121 SSFAFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIE 180
           SSFAFPL+IP+NF+ NPIQKLQE IL+TQRN KIQVVEDTPYGQYLEAEVDGNFGRDVIE
Sbjct: 121 SSFAFPLNIPDNFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIE 180

Query: 181 FLVKGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD 232
           FLV+GDV AYR MATKVTYVYPFTTA GDSKGQEERM+KIID L WYSPTFDSMD
Sbjct: 181 FLVRGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMD 231

BLAST of MC03g0947 vs. NCBI nr
Match: KAG7012320.1 (Thylakoid lumenal 17.9 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 371 bits (953), Expect = 4.25e-128
Identity = 192/232 (82.76%), Postives = 207/232 (89.22%), Query Frame = 0

Query: 1   MSSLRFPPPLVSPWKKKKKKNNH-SPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVT 60
           MSSL F P LVSPWKKKK  N   S   N+TS PSMAAL N + KPI +SHLLSFALS+T
Sbjct: 1   MSSLHFRPALVSPWKKKKNNNQFLSAVLNRTSPPSMAALPNPNHKPIFISHLLSFALSIT 60

Query: 61  LSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSS 120
           L+SPFPSLAIPS NSLSSPLSPTTPFSQSK+L IGLENGKIRPCPSTNP+CVSTNPKSSS
Sbjct: 61  LTSPFPSLAIPSFNSLSSPLSPTTPFSQSKDLPIGLENGKIRPCPSTNPSCVSTNPKSSS 120

Query: 121 FAFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFL 180
           FAFPLSIPE++T NPIQKLQEVIL+TQRNAKIQ+VEDTPYGQY+EAEVDGNFGRDVIEFL
Sbjct: 121 FAFPLSIPESYTGNPIQKLQEVILETQRNAKIQMVEDTPYGQYMEAEVDGNFGRDVIEFL 180

Query: 181 VKGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSM 231
           V+GDV AYR MA KVTYVYPFTTA GDSKGQEERMKKII+ L WYSPTF+SM
Sbjct: 181 VRGDVAAYRIMAAKVTYVYPFTTALGDSKGQEERMKKIIEELDWYSPTFESM 232

BLAST of MC03g0947 vs. ExPASy TrEMBL
Match: A0A6J1C708 (thylakoid lumenal 17.9 kDa protein, chloroplastic-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111008832 PE=4 SV=1)

HSP 1 Score: 455 bits (1170), Expect = 1.69e-161
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0

Query: 1   MSSLRFPPPLVSPWKKKKKKNNHSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVTL 60
           MSSLRFPPPLVSPWKKKKKKNNHSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVTL
Sbjct: 1   MSSLRFPPPLVSPWKKKKKKNNHSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVTL 60

Query: 61  SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSSF 120
           SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSSF
Sbjct: 61  SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSSF 120

Query: 121 AFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
           AFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV
Sbjct: 121 AFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180

Query: 181 KGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD 232
           KGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD
Sbjct: 181 KGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD 232

BLAST of MC03g0947 vs. ExPASy TrEMBL
Match: A0A5A7UK02 (Thylakoid lumenal 17.9 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004760 PE=4 SV=1)

HSP 1 Score: 375 bits (962), Expect = 8.46e-130
Identity = 191/232 (82.33%), Postives = 207/232 (89.22%), Query Frame = 0

Query: 1   MSSLRFPPPLVSPWKKKKKKNNHSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVTL 60
           MSSL+F P LVSPWKKK   NN +   +  S+PSM+ALQN + KPI LSHLLSFALS+TL
Sbjct: 1   MSSLQFRPLLVSPWKKKDNNNNKNQYHSPVSVPSMSALQNVNHKPIFLSHLLSFALSITL 60

Query: 61  SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSSF 120
           +SPFPS+AIPSLNSLSSPLSPTTPFSQSKNL  GLENGKI PCPSTNP+CVSTNPKSSSF
Sbjct: 61  TSPFPSVAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120

Query: 121 AFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
           AFPL+IP+NF+ NPIQKLQE IL+TQRN KIQ+VEDTPYGQYLEAEVDGNFGRDVIEFLV
Sbjct: 121 AFPLNIPDNFSGNPIQKLQEAILETQRNPKIQMVEDTPYGQYLEAEVDGNFGRDVIEFLV 180

Query: 181 KGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD 232
           KGDV AYR MATKVTYVYPFTTA GDSKGQEERM+KIID L WYSPTFDSMD
Sbjct: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMD 232

BLAST of MC03g0947 vs. ExPASy TrEMBL
Match: A0A1S3AZP3 (thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484512 PE=4 SV=1)

HSP 1 Score: 375 bits (962), Expect = 8.46e-130
Identity = 191/232 (82.33%), Postives = 207/232 (89.22%), Query Frame = 0

Query: 1   MSSLRFPPPLVSPWKKKKKKNNHSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVTL 60
           MSSL+F P LVSPWKKK   NN +   +  S+PSM+ALQN + KPI LSHLLSFALS+TL
Sbjct: 1   MSSLQFRPLLVSPWKKKDNNNNKNQYHSPVSVPSMSALQNVNHKPIFLSHLLSFALSITL 60

Query: 61  SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSSF 120
           +SPFPS+AIPSLNSLSSPLSPTTPFSQSKNL  GLENGKI PCPSTNP+CVSTNPKSSSF
Sbjct: 61  TSPFPSVAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120

Query: 121 AFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
           AFPL+IP+NF+ NPIQKLQE IL+TQRN KIQ+VEDTPYGQYLEAEVDGNFGRDVIEFLV
Sbjct: 121 AFPLNIPDNFSGNPIQKLQEAILETQRNPKIQMVEDTPYGQYLEAEVDGNFGRDVIEFLV 180

Query: 181 KGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD 232
           KGDV AYR MATKVTYVYPFTTA GDSKGQEERM+KIID L WYSPTFDSMD
Sbjct: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMD 232

BLAST of MC03g0947 vs. ExPASy TrEMBL
Match: A0A0A0LRK9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050570 PE=4 SV=1)

HSP 1 Score: 374 bits (959), Expect = 2.34e-129
Identity = 193/235 (82.13%), Postives = 207/235 (88.09%), Query Frame = 0

Query: 1   MSSLRFPPPLVSPWKKKKKKNN---HSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALS 60
           MSSL+F PPLVSPWKKK   N    HSP     S+PSM+ LQN++ KPI LSHLLSFALS
Sbjct: 1   MSSLQFRPPLVSPWKKKDNNNKNQYHSP----VSVPSMSTLQNANHKPIFLSHLLSFALS 60

Query: 61  VTLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKS 120
           +TLSSPFPS+AIPSLNSLSSPLSPTTPFSQSKNL  GLENGKI PCPS NP+CVSTNPKS
Sbjct: 61  ITLSSPFPSIAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSANPSCVSTNPKS 120

Query: 121 SSFAFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIE 180
           SSFAFPL+IP+NF+ NPIQKLQE IL+TQRN KIQVVEDTPYGQYLEAEVDGNFGRDVIE
Sbjct: 121 SSFAFPLNIPDNFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIE 180

Query: 181 FLVKGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD 232
           FLV+GDV AYR MATKVTYVYPFTTA GDSKGQEERM+KIID L WYSPTFDSMD
Sbjct: 181 FLVRGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMD 231

BLAST of MC03g0947 vs. ExPASy TrEMBL
Match: A0A6J1GT70 (thylakoid lumenal 17.9 kDa protein, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457250 PE=4 SV=1)

HSP 1 Score: 371 bits (953), Expect = 2.06e-128
Identity = 193/232 (83.19%), Postives = 207/232 (89.22%), Query Frame = 0

Query: 1   MSSLRFPPPLVSPWKKKKKKNNH-SPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVT 60
           MSSL F P LVSPWKKKKK N   S   N+TS PSMAAL N + KPI +SHLLSFALS+T
Sbjct: 1   MSSLHFRPALVSPWKKKKKNNQFLSAVLNRTSPPSMAALPNPNHKPIFISHLLSFALSIT 60

Query: 61  LSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSS 120
           L+SPFPSLAIPS NSLSSPLSPTTPFSQSK+L IGLENGKIRPCPSTNP+CVSTNPKSSS
Sbjct: 61  LTSPFPSLAIPSFNSLSSPLSPTTPFSQSKDLPIGLENGKIRPCPSTNPSCVSTNPKSSS 120

Query: 121 FAFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFL 180
           FAF LSIPE+FT NPIQKLQEVIL+TQRNAKIQ+VEDTPYGQY+EAEVDGNFGRDVIEFL
Sbjct: 121 FAFSLSIPESFTGNPIQKLQEVILETQRNAKIQMVEDTPYGQYMEAEVDGNFGRDVIEFL 180

Query: 181 VKGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSM 231
           V+GDV AYR MA KVTYVYPFTTA GDSKGQEERMKKII+ L WYSPTF+SM
Sbjct: 181 VRGDVAAYRIMAAKVTYVYPFTTALGDSKGQEERMKKIIEELDWYSPTFESM 232

BLAST of MC03g0947 vs. TAIR 10
Match: AT4G24930.1 (thylakoid lumenal 17.9 kDa protein, chloroplast )

HSP 1 Score: 259.6 bits (662), Expect = 2.4e-69
Identity = 136/195 (69.74%), Postives = 165/195 (84.62%), Query Frame = 0

Query: 40  NSDQKPI-LLSHLLSFALSVTLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENG 99
           +S   PI LL  L+SFAL+++L+S  P+LAIPSL+S S PL  TTPF+QSK +Q GL NG
Sbjct: 34  SSTSPPISLLPKLISFALAISLTSFSPALAIPSLSS-SQPL--TTPFTQSKFVQTGLLNG 93

Query: 100 KIRPCPSTNPACVSTNPKSSSFAFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTP 159
           KIRPCPSTNP CVSTNP SSSF+FPL+IPE  T++PI+KL+E I+ TQ+N K  V+EDTP
Sbjct: 94  KIRPCPSTNPGCVSTNPTSSSFSFPLTIPETDTQDPIEKLKEAIMSTQKNPKFVVLEDTP 153

Query: 160 YGQYLEAEVD-GNFGRDVIEFLVKGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKI 219
           YG+Y+EAEV+ G F RDV+EFLVK DVVAYR MATKVT+VYPFTTAFGDSKGQEER+KK+
Sbjct: 154 YGRYVEAEVEGGGFSRDVMEFLVKQDVVAYRCMATKVTFVYPFTTAFGDSKGQEERLKKL 213

Query: 220 IDNLGWYSPTFDSMD 233
           ID LGWY+PTF+SM+
Sbjct: 214 IDQLGWYAPTFESME 225

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SW333.3e-6869.74Thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=370... [more]
Match NameE-valueIdentityDescription
XP_022137359.13.49e-161100.00thylakoid lumenal 17.9 kDa protein, chloroplastic-like isoform X3 [Momordica cha... [more]
XP_038893869.13.62e-13586.70thylakoid lumenal 17.9 kDa protein, chloroplastic [Benincasa hispida][more]
XP_008439847.11.75e-12982.33PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis melo] >KAA... [more]
XP_004154123.14.83e-12982.13thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis sativus] >KGN64418.1 ... [more]
KAG7012320.14.25e-12882.76Thylakoid lumenal 17.9 kDa protein, chloroplastic, partial [Cucurbita argyrosper... [more]
Match NameE-valueIdentityDescription
A0A6J1C7081.69e-161100.00thylakoid lumenal 17.9 kDa protein, chloroplastic-like isoform X3 OS=Momordica c... [more]
A0A5A7UK028.46e-13082.33Thylakoid lumenal 17.9 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3AZP38.46e-13082.33thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC... [more]
A0A0A0LRK92.34e-12982.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050570 PE=4 SV=1[more]
A0A6J1GT702.06e-12883.19thylakoid lumenal 17.9 kDa protein, chloroplastic isoform X2 OS=Cucurbita moscha... [more]
Match NameE-valueIdentityDescription
AT4G24930.12.4e-6969.74thylakoid lumenal 17.9 kDa protein, chloroplast [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
IPR037734Thylakoid lumenal 17.9kDa proteinPANTHERPTHR36783THYLAKOID LUMENAL 17.9 KDA PROTEIN, CHLOROPLASTICcoord: 18..232

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC03g0947.1MC03g0947.1mRNA