MC02g_new0386 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC02g_new0386
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic
LocationMC02: 16276501 .. 16277066 (-)
RNA-Seq ExpressionMC02g_new0386
SyntenyMC02g_new0386
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTGTTATCATATAGCTTTGTATCGACTAAGTTCACGAGTTGGAGATAAGCGGACTCGAACCGCTGACATCCGCCACAGGGTAAACCACCGCCTTTCAGGCCCCCGACTGATTCTACCATAGAGGCCAACGATAGACAATAACTCCCCTCGAACACAGCTTACAACTTTCATCGTACTGTGCTCTCCAAAGAGCAACTCTTCTCAAAATCTCAAAAGGTACTGAGTTGGAATCCCATTATAACTAAGGATTCTTGTGGTTCCGGAGAATCCAGCTACAAGAGAACCAGGAACGGAGAGCTTTCCCCCCTTTTCCGCCCGCCTCTTTAGTCCTAACAATGCTGGTTTTAAGAATGAGTGATTGCCCTTCTCCGACCCTTATTGCCCAATCGGAGAGCGGACAGCTAATGCGTTCCACTTATTGAACAGGGTTCTACGGTCGGTCTGCAACCCCTGGATACCGAAGGCATTCTTGAGATGATCTCGTCGTTCCTACGGGGTGGAGACAATGGGGTCGGACCATGGATTTTCCTTCCTTTTGCCGCATTTCGCTCAAAGGGTTGA

mRNA sequence

ATGAAGTGTTATCATATAGCTTTGTATCGACTAAGTTCACGAGTTGGAGATAAGCGGACTCGAACCGCTGACATCCGCCACAGGGGTTCTACGGTCGGTCTGCAACCCCTGGATACCGAAGGCATTCTTGAGATGATCTCGTCGTTCCTACGGGGTGGAGACAATGGGGTCGGACCATGGATTTTCCTTCCTTTTGCCGCATTTCGCTCAAAGGGTTGA

Coding sequence (CDS)

ATGAAGTGTTATCATATAGCTTTGTATCGACTAAGTTCACGAGTTGGAGATAAGCGGACTCGAACCGCTGACATCCGCCACAGGGGTTCTACGGTCGGTCTGCAACCCCTGGATACCGAAGGCATTCTTGAGATGATCTCGTCGTTCCTACGGGGTGGAGACAATGGGGTCGGACCATGGATTTTCCTTCCTTTTGCCGCATTTCGCTCAAAGGGTTGA

Protein sequence

MKCYHIALYRLSSRVGDKRTRTADIRHRGSTVGLQPLDTEGILEMISSFLRGGDNGVGPWIFLPFAAFRSKG
Homology
BLAST of MC02g_new0386 vs. NCBI nr
Match: GAY57272.1 (hypothetical protein CUMW_178160 [Citrus unshiu])

HSP 1 Score: 77.4 bits (189), Expect = 6.79e-17
Identity = 39/47 (82.98%), Postives = 42/47 (89.36%), Query Frame = 0

Query: 3  CYHI--ALYRLSSRVGDKRTRTADIRHRGSTVGLQPLDTEGILEMIS 47
          CYHI  ALYRLSSRVGDKRTRTADIRHRGS VG +PLDTEG+L +IS
Sbjct: 15 CYHIHIALYRLSSRVGDKRTRTADIRHRGSMVGPRPLDTEGVLGVIS 61

BLAST of MC02g_new0386 vs. NCBI nr
Match: RYR49284.1 (hypothetical protein Ahy_A07g035696 [Arachis hypogaea])

HSP 1 Score: 66.6 bits (161), Expect = 2.74e-12
Identity = 33/42 (78.57%), Postives = 36/42 (85.71%), Query Frame = 0

Query: 6  IALYRLSSRVGDKRTRTADIRHRGSTVGLQPLDTEGILEMIS 47
          +ALYRLSSRVGDKRTRTADIRHRGS V  QPL+ EG+L  IS
Sbjct: 51 LALYRLSSRVGDKRTRTADIRHRGSMVSPQPLNAEGVLGEIS 92

BLAST of MC02g_new0386 vs. NCBI nr
Match: YP_009526534.1 (hypothetical protein [Ammopiptanthus mongolicus] >AXV54293.1 hypothetical protein [Ammopiptanthus mongolicus])

HSP 1 Score: 66.6 bits (161), Expect = 1.11e-10
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0

Query: 3   CYHIALYRLSSRVGDKRTRTADIRHRGSTVGLQP 36
           CYHIALYRLSSRVGDKRTRTADIRHRGS VG +P
Sbjct: 397 CYHIALYRLSSRVGDKRTRTADIRHRGSMVGPRP 430

BLAST of MC02g_new0386 vs. NCBI nr
Match: KYP38303.1 (hypothetical protein KK1_040465, partial [Cajanus cajan])

HSP 1 Score: 58.5 bits (140), Expect = 2.02e-09
Identity = 26/28 (92.86%), Postives = 28/28 (100.00%), Query Frame = 0

Query: 1  MKCYHIALYRLSSRVGDKRTRTADIRHR 28
          ++CYHIALYRLSSRVGDKRTRTADIRHR
Sbjct: 10 IRCYHIALYRLSSRVGDKRTRTADIRHR 37

BLAST of MC02g_new0386 vs. NCBI nr
Match: KAF8091073.1 (hypothetical protein N665_0454s0014 [Sinapis alba])

HSP 1 Score: 57.4 bits (137), Expect = 1.13e-08
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 0

Query: 3  CYHIALYRLSSRVGDKRTRTADIRHR 28
          CYHIALYRLSSRVGDKRTRTADIRHR
Sbjct: 15 CYHIALYRLSSRVGDKRTRTADIRHR 40

BLAST of MC02g_new0386 vs. ExPASy TrEMBL
Match: A0A2H5PY51 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_178160 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.29e-17
Identity = 39/47 (82.98%), Postives = 42/47 (89.36%), Query Frame = 0

Query: 3  CYHI--ALYRLSSRVGDKRTRTADIRHRGSTVGLQPLDTEGILEMIS 47
          CYHI  ALYRLSSRVGDKRTRTADIRHRGS VG +PLDTEG+L +IS
Sbjct: 15 CYHIHIALYRLSSRVGDKRTRTADIRHRGSMVGPRPLDTEGVLGVIS 61

BLAST of MC02g_new0386 vs. ExPASy TrEMBL
Match: A0A445CEA8 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A07g035696 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.32e-12
Identity = 33/42 (78.57%), Postives = 36/42 (85.71%), Query Frame = 0

Query: 6  IALYRLSSRVGDKRTRTADIRHRGSTVGLQPLDTEGILEMIS 47
          +ALYRLSSRVGDKRTRTADIRHRGS V  QPL+ EG+L  IS
Sbjct: 51 LALYRLSSRVGDKRTRTADIRHRGSMVSPQPLNAEGVLGEIS 92

BLAST of MC02g_new0386 vs. ExPASy TrEMBL
Match: A0A385G270 (Uncharacterized protein OS=Ammopiptanthus mongolicus OX=126911 GN=amoMp11 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 5.39e-11
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0

Query: 3   CYHIALYRLSSRVGDKRTRTADIRHRGSTVGLQP 36
           CYHIALYRLSSRVGDKRTRTADIRHRGS VG +P
Sbjct: 397 CYHIALYRLSSRVGDKRTRTADIRHRGSMVGPRP 430

BLAST of MC02g_new0386 vs. ExPASy TrEMBL
Match: A0A151R721 (Uncharacterized protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_040465 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 9.80e-10
Identity = 26/28 (92.86%), Postives = 28/28 (100.00%), Query Frame = 0

Query: 1  MKCYHIALYRLSSRVGDKRTRTADIRHR 28
          ++CYHIALYRLSSRVGDKRTRTADIRHR
Sbjct: 10 IRCYHIALYRLSSRVGDKRTRTADIRHR 37

BLAST of MC02g_new0386 vs. ExPASy TrEMBL
Match: A0A6A5LC74 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00000747 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.07e-08
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 0

Query: 3   CYHIALYRLSSRVGDKRTRTADIRHRGSTV 32
           CYHIALYRLSSRVGDKRTRTADIRHR  T+
Sbjct: 472 CYHIALYRLSSRVGDKRTRTADIRHRRPTI 501

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GAY57272.16.79e-1782.98hypothetical protein CUMW_178160 [Citrus unshiu][more]
RYR49284.12.74e-1278.57hypothetical protein Ahy_A07g035696 [Arachis hypogaea][more]
YP_009526534.11.11e-1091.18hypothetical protein [Ammopiptanthus mongolicus] >AXV54293.1 hypothetical protei... [more]
KYP38303.12.02e-0992.86hypothetical protein KK1_040465, partial [Cajanus cajan][more]
KAF8091073.11.13e-08100.00hypothetical protein N665_0454s0014 [Sinapis alba][more]
Match NameE-valueIdentityDescription
A0A2H5PY513.29e-1782.98Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_178160 PE=4 SV=1[more]
A0A445CEA81.32e-1278.57Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A07g035696 PE=4 SV=1[more]
A0A385G2705.39e-1191.18Uncharacterized protein OS=Ammopiptanthus mongolicus OX=126911 GN=amoMp11 PE=4 S... [more]
A0A151R7219.80e-1092.86Uncharacterized protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_040465 PE=4 S... [more]
A0A6A5LC742.07e-0890.00Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00000747 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC02g_new0386.1MC02g_new0386.1mRNA