MC02g1377 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g1377
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Protein TIC 214
Location	MC02: 16279229 .. 16279403 (+)
RNA-Seq Expression	MC02g1377
Synteny	MC02g1377

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGTGAAGATGCGGACTACCTGCACCTGGACAGAAAGACCCTATGAAGCTTCACTGTTCCCTGGGATTGGCTTTGGGCTTTTCCTGCGCAGCTTACGTGGAATGCGAAGAAGGCCCCCTTCTGGGGGGGCCGGAGCCATCAGTGAGATACCACTCTGGAAGAGCTAGAATT

mRNA sequence

ATGTCTGTGAAGATGCGGACTACCTGCACCTGGACAGAAAGACCCTATGAAGCTTCACTGTTCCCTGGGATTGGCTTTGGGCTTTTCCTGCGCAGCTTACGTGGAATGCGAAGAAGGCCCCCTTCTGGGCCGGAGCCATCAGTGAGATACCACTCTGGAAGAGCTAGAATT

Coding sequence (CDS)

ATGTCTGTGAAGATGCGGACTACCTGCACCTGGACAGAAAGACCCTATGAAGCTTCACTGTTCCCTGGGATTGGCTTTGGGCTTTTCCTGCGCAGCTTACGTGGAATGCGAAGAAGGCCCCCTTCTGGGCCGGAGCCATCAGTGAGATACCACTCTGGAAGAGCTAGAATT

Protein sequence

MSVKMRTTCTWTERPYEASLFPGIGFGLFLRSLRGMRRRPPSGPEPSVRYHSGRARI

Homology

[Close]

BLAST of MC02g1377 vs. NCBI nr
Match: KAB2061199.1 (hypothetical protein ES319_A10G070400v1 [Gossypium barbadense] >TYI05249.1 hypothetical protein ES332_A10G075400v1 [Gossypium tomentosum])

HSP 1 Score: 110 bits (275), Expect = 4.49e-30
Identity = 54/58 (93.10%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 1  MSVKMRTTCTWTERPYEASLFPGIGFGLFLRSLRGMRRRPPSG-PEPSVRYHSGRARI 57
          MSVKMRTT TWTERPYEASLFPGIGFGLFLRSL G RRRPPSG PEPSVRYHSGRARI
Sbjct: 1  MSVKMRTTRTWTERPYEASLFPGIGFGLFLRSLSGRRRRPPSGGPEPSVRYHSGRARI 58

[Close]

BLAST of MC02g1377 vs. NCBI nr
Match: KAG4109416.1 (hypothetical protein ERO13_1Z049792v2 [Gossypium hirsutum])

HSP 1 Score: 110 bits (274), Expect = 5.25e-30
Identity = 54/58 (93.10%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 1  MSVKMRTTCTWTERPYEASLFPGIGFGLFLRSLRGMRRRPPSG-PEPSVRYHSGRARI 57
          MSVKMRTT TWTERPYEASLFPGIGFGLFLRSL G RRRPPSG PEPSVRYHSGRARI
Sbjct: 1  MSVKMRTTRTWTERPYEASLFPGIGFGLFLRSLGGRRRRPPSGGPEPSVRYHSGRARI 58

[Close]

BLAST of MC02g1377 vs. NCBI nr
Match: KAB2094363.1 (hypothetical protein ES319_A02G152700v1 [Gossypium barbadense] >KAG4109270.1 hypothetical protein ERO13_1Z050082v2 [Gossypium hirsutum] >KAG4204297.1 hypothetical protein ERO13_A04G039225v2 [Gossypium hirsutum])

HSP 1 Score: 110 bits (274), Expect = 6.37e-30
Identity = 54/58 (93.10%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 1  MSVKMRTTCTWTERPYEASLFPGIGFGLFLRSLRGMRRRPPSG-PEPSVRYHSGRARI 57
          MSVKMRTT TWTERPYEASLFPGIGFGLFLRSL G RRRPPSG PEPSVRYHSGRARI
Sbjct: 1  MSVKMRTTRTWTERPYEASLFPGIGFGLFLRSLGGRRRRPPSGGPEPSVRYHSGRARI 58

[Close]

BLAST of MC02g1377 vs. NCBI nr
Match: RYQ99209.1 (hypothetical protein Ahy_B07g087106 [Arachis hypogaea])

HSP 1 Score: 110 bits (274), Expect = 6.37e-30
Identity = 54/58 (93.10%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 1  MSVKMRTTCTWTERPYEASLFPGIGFGLFLRSLRGMRRRPPSG-PEPSVRYHSGRARI 57
          MSVKMRTT TWTERPYEASLFPGIGFGLFLRSL G RRRPPSG PEPSVRYHSGRARI
Sbjct: 1  MSVKMRTTSTWTERPYEASLFPGIGFGLFLRSLGGGRRRPPSGGPEPSVRYHSGRARI 58

[Close]

BLAST of MC02g1377 vs. NCBI nr
Match: TYI98674.1 (hypothetical protein E1A91_D01G231500v1 [Gossypium mustelinum])

HSP 1 Score: 110 bits (274), Expect = 6.37e-30
Identity = 54/58 (93.10%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 1  MSVKMRTTCTWTERPYEASLFPGIGFGLFLRSLRGMRRRPPSG-PEPSVRYHSGRARI 57
          MSVKMRTT TWTERPYEASLFPGIGFGLFLRSL G RRRPPSG PEPSVRYHSGRARI
Sbjct: 1  MSVKMRTTRTWTERPYEASLFPGIGFGLFLRSLGGRRRRPPSGGPEPSVRYHSGRARI 58

[Close]

BLAST of MC02g1377 vs. ExPASy TrEMBL
Match: A0A5D2NN96 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A10G075400v1 PE=4 SV=1)

HSP 1 Score: 110 bits (275), Expect = 2.17e-30
Identity = 54/58 (93.10%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 1  MSVKMRTTCTWTERPYEASLFPGIGFGLFLRSLRGMRRRPPSG-PEPSVRYHSGRARI 57
          MSVKMRTT TWTERPYEASLFPGIGFGLFLRSL G RRRPPSG PEPSVRYHSGRARI
Sbjct: 1  MSVKMRTTRTWTERPYEASLFPGIGFGLFLRSLSGRRRRPPSGGPEPSVRYHSGRARI 58

[Close]

BLAST of MC02g1377 vs. ExPASy TrEMBL
Match: A0A5J5U4D2 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A10G070400v1 PE=4 SV=1)

HSP 1 Score: 110 bits (275), Expect = 2.17e-30
Identity = 54/58 (93.10%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 1  MSVKMRTTCTWTERPYEASLFPGIGFGLFLRSLRGMRRRPPSG-PEPSVRYHSGRARI 57
          MSVKMRTT TWTERPYEASLFPGIGFGLFLRSL G RRRPPSG PEPSVRYHSGRARI
Sbjct: 1  MSVKMRTTRTWTERPYEASLFPGIGFGLFLRSLSGRRRRPPSGGPEPSVRYHSGRARI 58

[Close]

BLAST of MC02g1377 vs. ExPASy TrEMBL
Match: A0A5J5WR81 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A02G152700v1 PE=4 SV=1)

HSP 1 Score: 110 bits (274), Expect = 3.09e-30
Identity = 54/58 (93.10%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 1  MSVKMRTTCTWTERPYEASLFPGIGFGLFLRSLRGMRRRPPSG-PEPSVRYHSGRARI 57
          MSVKMRTT TWTERPYEASLFPGIGFGLFLRSL G RRRPPSG PEPSVRYHSGRARI
Sbjct: 1  MSVKMRTTRTWTERPYEASLFPGIGFGLFLRSLGGRRRRPPSGGPEPSVRYHSGRARI 58

[Close]

BLAST of MC02g1377 vs. ExPASy TrEMBL
Match: A0A444YBA0 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B07g087106 PE=4 SV=1)

HSP 1 Score: 110 bits (274), Expect = 3.09e-30
Identity = 54/58 (93.10%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 1  MSVKMRTTCTWTERPYEASLFPGIGFGLFLRSLRGMRRRPPSG-PEPSVRYHSGRARI 57
          MSVKMRTT TWTERPYEASLFPGIGFGLFLRSL G RRRPPSG PEPSVRYHSGRARI
Sbjct: 1  MSVKMRTTSTWTERPYEASLFPGIGFGLFLRSLGGGRRRPPSGGPEPSVRYHSGRARI 58

[Close]

BLAST of MC02g1377 vs. ExPASy TrEMBL
Match: A0A5D2WA01 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D01G231500v1 PE=4 SV=1)

HSP 1 Score: 110 bits (274), Expect = 3.09e-30
Identity = 54/58 (93.10%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 1  MSVKMRTTCTWTERPYEASLFPGIGFGLFLRSLRGMRRRPPSG-PEPSVRYHSGRARI 57
          MSVKMRTT TWTERPYEASLFPGIGFGLFLRSL G RRRPPSG PEPSVRYHSGRARI
Sbjct: 1  MSVKMRTTRTWTERPYEASLFPGIGFGLFLRSLGGRRRRPPSGGPEPSVRYHSGRARI 58

The following BLAST results are available for this feature:

BLAST of MC02g1377 vs.


Match Name	E-value	Identity	Description

BLAST of MC02g1377 vs. NCBI nr


Match Name	E-value	Identity	Description
KAB2061199.1	4.49e-30	93.10	hypothetical protein ES319_A10G070400v1 [Gossypium barbadense] >TYI05249.1 hypot...	[more]
KAG4109416.1	5.25e-30	93.10	hypothetical protein ERO13_1Z049792v2 [Gossypium hirsutum]	[more]
KAB2094363.1	6.37e-30	93.10	hypothetical protein ES319_A02G152700v1 [Gossypium barbadense] >KAG4109270.1 hyp...	[more]
RYQ99209.1	6.37e-30	93.10	hypothetical protein Ahy_B07g087106 [Arachis hypogaea]	[more]
TYI98674.1	6.37e-30	93.10	hypothetical protein E1A91_D01G231500v1 [Gossypium mustelinum]	[more]

BLAST of MC02g1377 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D2NN96	2.17e-30	93.10	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A10G075400v1 P...	[more]
A0A5J5U4D2	2.17e-30	93.10	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A10G070400v1 PE...	[more]
A0A5J5WR81	3.09e-30	93.10	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A02G152700v1 PE...	[more]
A0A444YBA0	3.09e-30	93.10	Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B07g087106 PE=4 SV=1	[more]
A0A5D2WA01	3.09e-30	93.10	Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D01G231500v1 P...	[more]

BLAST of MC02g1377 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..57
None	No IPR available	PANTHER	PTHR48245	FAMILY NOT NAMED	coord: 1..44

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g1377.1	MC02g1377.1	mRNA