Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTTCCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAGCTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTAAAAAGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTATTACCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATACCGTCATTGCTTCTTCTCCGGGAAAAGAAGTTCACGACCCGTAGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCA
mRNA sequence
CTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTTCCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAGCTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCGATTTGACGGCGGACTTAAAAAGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTATTACCGCGGCTGCTGGCACAGAGCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCA
Coding sequence (CDS)
CTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTTCCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAGCTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCGATTTGACGGCGGACTTAAAAAGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTATTACCGCGGCTGCTGGCACAGAGCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCA
Protein sequence
LSSLSVSVGPAECFRRWCSFRSLRISPLHRKFPLPLPYSSLVVSTACPGLSDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQSFYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP
Homology
BLAST of MC02g1369 vs. NCBI nr
Match:
GFP97095.1 (hypothetical protein PHJA_001853600 [Phtheirospermum japonicum] >GFQ07944.1 hypothetical protein PHJA_002938400 [Phtheirospermum japonicum])
HSP 1 Score: 122 bits (306), Expect = 5.19e-32
Identity = 66/73 (90.41%), Postives = 67/73 (91.78%), Query Frame = 0
Query: 52 DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQ------SFYLHAALLRQAFAHCGKFPT 111
DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQ +FYLHAALLRQAFAHCGKFPT
Sbjct: 68 DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQKVHDPWAFYLHAALLRQAFAHCGKFPT 127
Query: 112 AASRRSLGRVSVP 118
AASRRSLGRVSVP
Sbjct: 128 AASRRSLGRVSVP 140
BLAST of MC02g1369 vs. NCBI nr
Match:
EPS74505.1 (hypothetical protein M569_00222, partial [Genlisea aurea])
HSP 1 Score: 118 bits (296), Expect = 3.88e-30
Identity = 66/83 (79.52%), Postives = 67/83 (80.72%), Query Frame = 0
Query: 52 DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQS----------------FYLHAALLRQ 111
DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQ+ FYLHAALLRQ
Sbjct: 94 DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQNTVIASSPGKEVHDPWAFYLHAALLRQ 153
Query: 112 AFAHCGKFPTAASRRSLGRVSVP 118
AFAHCGKFPTAASRRSLGRVSVP
Sbjct: 154 AFAHCGKFPTAASRRSLGRVSVP 176
BLAST of MC02g1369 vs. NCBI nr
Match:
AAV44205.1 (unknow protein [Oryza sativa Japonica Group])
HSP 1 Score: 116 bits (291), Expect = 2.84e-29
Identity = 65/83 (78.31%), Postives = 67/83 (80.72%), Query Frame = 0
Query: 52 DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQS----------------FYLHAALLRQ 111
DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQ+ F+LHAALLRQ
Sbjct: 96 DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQNTVIVSSPRKEVDDPWAFHLHAALLRQ 155
Query: 112 AFAHCGKFPTAASRRSLGRVSVP 118
AFAHCGKFPTAASRRSLGRVSVP
Sbjct: 156 AFAHCGKFPTAASRRSLGRVSVP 178
BLAST of MC02g1369 vs. NCBI nr
Match:
GFQ00420.1 (hypothetical protein PHJA_002186000, partial [Phtheirospermum japonicum])
HSP 1 Score: 111 bits (277), Expect = 8.79e-28
Identity = 60/73 (82.19%), Postives = 62/73 (84.93%), Query Frame = 0
Query: 52 DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQ------SFYLHAALLRQAFAHCGKFPT 111
DLTADLKSHLQTLY QS RITL SSVLPRLLAQ +FYLH ALL QAF+HCGKFPT
Sbjct: 50 DLTADLKSHLQTLYTQSLRITLVSSVLPRLLAQKVHDPWAFYLHTALLCQAFSHCGKFPT 109
Query: 112 AASRRSLGRVSVP 118
AASRRSLGRVSVP
Sbjct: 110 AASRRSLGRVSVP 122
BLAST of MC02g1369 vs. NCBI nr
Match:
KAG6621723.1 (hypothetical protein I3842_Q013700, partial [Carya illinoinensis])
HSP 1 Score: 108 bits (269), Expect = 4.00e-27
Identity = 58/67 (86.57%), Postives = 59/67 (88.06%), Query Frame = 0
Query: 52 DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQSFYLHAALLRQAFAHCGKFPTAASRRS 111
DLTADLKSHLQTLYAQSFRITLASS +FYLHAALLRQAFAHCGKFPTAASRRS
Sbjct: 32 DLTADLKSHLQTLYAQSFRITLASS--------AFYLHAALLRQAFAHCGKFPTAASRRS 90
Query: 112 LGRVSVP 118
LGRVSVP
Sbjct: 92 LGRVSVP 90
BLAST of MC02g1369 vs. ExPASy TrEMBL
Match:
S8D511 (Uncharacterized protein (Fragment) OS=Genlisea aurea OX=192259 GN=M569_00222 PE=4 SV=1)
HSP 1 Score: 118 bits (296), Expect = 1.88e-30
Identity = 66/83 (79.52%), Postives = 67/83 (80.72%), Query Frame = 0
Query: 52 DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQS----------------FYLHAALLRQ 111
DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQ+ FYLHAALLRQ
Sbjct: 94 DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQNTVIASSPGKEVHDPWAFYLHAALLRQ 153
Query: 112 AFAHCGKFPTAASRRSLGRVSVP 118
AFAHCGKFPTAASRRSLGRVSVP
Sbjct: 154 AFAHCGKFPTAASRRSLGRVSVP 176
BLAST of MC02g1369 vs. ExPASy TrEMBL
Match:
Q5W7C9 (Unknow protein OS=Oryza sativa subsp. japonica OX=39947 GN=P0496H07.14 PE=4 SV=1)
HSP 1 Score: 116 bits (291), Expect = 1.38e-29
Identity = 65/83 (78.31%), Postives = 67/83 (80.72%), Query Frame = 0
Query: 52 DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQS----------------FYLHAALLRQ 111
DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQ+ F+LHAALLRQ
Sbjct: 96 DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQNTVIVSSPRKEVDDPWAFHLHAALLRQ 155
Query: 112 AFAHCGKFPTAASRRSLGRVSVP 118
AFAHCGKFPTAASRRSLGRVSVP
Sbjct: 156 AFAHCGKFPTAASRRSLGRVSVP 178
BLAST of MC02g1369 vs. ExPASy TrEMBL
Match:
M1DBW2 (30S ribosomal protein S12, chloroplastic OS=Solanum tuberosum OX=4113 PE=3 SV=1)
HSP 1 Score: 118 bits (296), Expect = 1.42e-29
Identity = 66/83 (79.52%), Postives = 67/83 (80.72%), Query Frame = 0
Query: 52 DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQS----------------FYLHAALLRQ 111
DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQ+ FYLHAALLRQ
Sbjct: 165 DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQNTVIASSPGKEVHDPWAFYLHAALLRQ 224
Query: 112 AFAHCGKFPTAASRRSLGRVSVP 118
AFAHCGKFPTAASRRSLGRVSVP
Sbjct: 225 AFAHCGKFPTAASRRSLGRVSVP 247
BLAST of MC02g1369 vs. ExPASy TrEMBL
Match:
A0A5D2YND6 (Uncharacterized protein (Fragment) OS=Gossypium mustelinum OX=34275 GN=E1A91_A07G184900v1 PE=4 SV=1)
HSP 1 Score: 108 bits (269), Expect = 5.01e-27
Identity = 58/67 (86.57%), Postives = 59/67 (88.06%), Query Frame = 0
Query: 52 DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQSFYLHAALLRQAFAHCGKFPTAASRRS 111
DLTADLKSHLQTLYAQSFRITLASS +FYLHAALLRQAFAHCGKFPTAASRRS
Sbjct: 68 DLTADLKSHLQTLYAQSFRITLASS--------AFYLHAALLRQAFAHCGKFPTAASRRS 126
Query: 112 LGRVSVP 118
LGRVSVP
Sbjct: 128 LGRVSVP 126
BLAST of MC02g1369 vs. ExPASy TrEMBL
Match:
A0A2K1Y5K5 (Uncharacterized protein (Fragment) OS=Populus trichocarpa OX=3694 GN=POPTR_013G140100 PE=4 SV=1)
HSP 1 Score: 108 bits (269), Expect = 5.41e-27
Identity = 58/67 (86.57%), Postives = 59/67 (88.06%), Query Frame = 0
Query: 52 DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQSFYLHAALLRQAFAHCGKFPTAASRRS 111
DLTADLKSHLQTLYAQSFRITLASS +FYLHAALLRQAFAHCGKFPTAASRRS
Sbjct: 68 DLTADLKSHLQTLYAQSFRITLASS--------AFYLHAALLRQAFAHCGKFPTAASRRS 126
Query: 112 LGRVSVP 118
LGRVSVP
Sbjct: 128 LGRVSVP 126
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
GFP97095.1 | 5.19e-32 | 90.41 | hypothetical protein PHJA_001853600 [Phtheirospermum japonicum] >GFQ07944.1 hypo... | [more] |
EPS74505.1 | 3.88e-30 | 79.52 | hypothetical protein M569_00222, partial [Genlisea aurea] | [more] |
AAV44205.1 | 2.84e-29 | 78.31 | unknow protein [Oryza sativa Japonica Group] | [more] |
GFQ00420.1 | 8.79e-28 | 82.19 | hypothetical protein PHJA_002186000, partial [Phtheirospermum japonicum] | [more] |
KAG6621723.1 | 4.00e-27 | 86.57 | hypothetical protein I3842_Q013700, partial [Carya illinoinensis] | [more] |
Match Name | E-value | Identity | Description | |
S8D511 | 1.88e-30 | 79.52 | Uncharacterized protein (Fragment) OS=Genlisea aurea OX=192259 GN=M569_00222 PE=... | [more] |
Q5W7C9 | 1.38e-29 | 78.31 | Unknow protein OS=Oryza sativa subsp. japonica OX=39947 GN=P0496H07.14 PE=4 SV=1 | [more] |
M1DBW2 | 1.42e-29 | 79.52 | 30S ribosomal protein S12, chloroplastic OS=Solanum tuberosum OX=4113 PE=3 SV=1 | [more] |
A0A5D2YND6 | 5.01e-27 | 86.57 | Uncharacterized protein (Fragment) OS=Gossypium mustelinum OX=34275 GN=E1A91_A07... | [more] |
A0A2K1Y5K5 | 5.41e-27 | 86.57 | Uncharacterized protein (Fragment) OS=Populus trichocarpa OX=3694 GN=POPTR_013G1... | [more] |
Match Name | E-value | Identity | Description | |