MC02g1360 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g1360
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic
Location	MC02: 16256922 .. 16257341 (-)
RNA-Seq Expression	MC02g1360
Synteny	MC02g1360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTATTCTTAGCATGATATTGGGGAATCTCATTGCTATTACTCAAACAAGCATGAAACGTATGCTTGCGTATTCGTCCATCGGTCAAATCGGATATGTAATTATTGGAATAATTGTTGGAGACTCAAATGGTGGATATGCAAGCATGATAACTTATATGCTGTTCTATATCTCCATGAATCTAGGAACTTTTGCTCGCATTGTATCATTTGGTCTACGTACCGGAACTGATAACATTCGAGATTATGCAGGATTATACACAAAAGATCCTTTTTTGGCTCTCTCTTTAGCCCTATGTCTCTTATCCTTAGGAGGTCTTCCTCCACTAGCAGGTTTTTTCGGAAAACTTCATTTATTCTGGTGTGGATGGCAGGCAGGCCTATATTTCTTGGTTTCAATAGGACTCCTTACGAGCGTTGTT

mRNA sequence

GCTATTCTTAGCATGATATTGGGGAATCTCATTGCTATTACTCAAACAAGCATGAAACGTATGCTTGCGTATTCGTCCATCGGTCAAATCGGATATGTAATTATTGGAATAATTGTTGGAGACTCAAATGGTGGATATGCAAGCATGATAACTTATATGCTGTTCTATATCTCCATGAATCTAGGAACTTTTGCTCGCATTGTATCATTTGGTCTACGTACCGGAACTGATAACATTCGAGATTATGCAGGATTATACACAAAAGATCCTTTTTTGGCTCTCTCTTTAGCCCTATGTCTCTTATCCTTAGGAGGTCTTCCTCCACTAGCAGGTTTTTTCGGAAAACTTCATTTATTCTGGTGTGGATGGCAGGCAGGCCTATATTTCTTGGTTTCAATAGGACTCCTTACGAGCGTTGTT

Coding sequence (CDS)

GCTATTCTTAGCATGATATTGGGGAATCTCATTGCTATTACTCAAACAAGCATGAAACGTATGCTTGCGTATTCGTCCATCGGTCAAATCGGATATGTAATTATTGGAATAATTGTTGGAGACTCAAATGGTGGATATGCAAGCATGATAACTTATATGCTGTTCTATATCTCCATGAATCTAGGAACTTTTGCTCGCATTGTATCATTTGGTCTACGTACCGGAACTGATAACATTCGAGATTATGCAGGATTATACACAAAAGATCCTTTTTTGGCTCTCTCTTTAGCCCTATGTCTCTTATCCTTAGGAGGTCTTCCTCCACTAGCAGGTTTTTTCGGAAAACTTCATTTATTCTGGTGTGGATGGCAGGCAGGCCTATATTTCTTGGTTTCAATAGGACTCCTTACGAGCGTTGTT

Protein sequence

AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMNLGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVV

Homology

[Close]

BLAST of MC02g1360 vs. ExPASy Swiss-Prot
Match: P0CC36 (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Buxus microphylla OX=153571 GN=ndhB1 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 3.3e-71
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 60
           AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSN GYASMITYMLFYISMN
Sbjct: 303 AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYISMN 362

Query: 61  LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 120
           LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW
Sbjct: 363 LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 422

Query: 121 CGWQAGLYFLVSIGLLTSVV 141
           CGWQAGLYFLVSIGLLTSVV
Sbjct: 423 CGWQAGLYFLVSIGLLTSVV 442

[Close]

BLAST of MC02g1360 vs. ExPASy Swiss-Prot
Match: P0CC37 (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Buxus microphylla OX=153571 GN=ndhB2 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 3.3e-71
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 60
           AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSN GYASMITYMLFYISMN
Sbjct: 303 AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYISMN 362

Query: 61  LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 120
           LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW
Sbjct: 363 LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 422

Query: 121 CGWQAGLYFLVSIGLLTSVV 141
           CGWQAGLYFLVSIGLLTSVV
Sbjct: 423 CGWQAGLYFLVSIGLLTSVV 442

[Close]

BLAST of MC02g1360 vs. ExPASy Swiss-Prot
Match: Q67IB2 (NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic OS=Muilla maritima OX=51461 GN=ndhB PE=3 SV=2)

HSP 1 Score: 268.9 bits (686), Expect = 3.3e-71
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 60
           AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSN GYASMITYMLFYISMN
Sbjct: 303 AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYISMN 362

Query: 61  LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 120
           LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW
Sbjct: 363 LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 422

Query: 121 CGWQAGLYFLVSIGLLTSVV 141
           CGWQAGLYFLVSIGLLTSVV
Sbjct: 423 CGWQAGLYFLVSIGLLTSVV 442

[Close]

BLAST of MC02g1360 vs. ExPASy Swiss-Prot
Match: Q67IE2 (NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic OS=Phormium tenax OX=51475 GN=ndhB PE=3 SV=2)

HSP 1 Score: 268.9 bits (686), Expect = 3.3e-71
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 60
           AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSN GYASMITYMLFYISMN
Sbjct: 303 AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYISMN 362

Query: 61  LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 120
           LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW
Sbjct: 363 LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 422

Query: 121 CGWQAGLYFLVSIGLLTSVV 141
           CGWQAGLYFLVSIGLLTSVV
Sbjct: 423 CGWQAGLYFLVSIGLLTSVV 442

[Close]

BLAST of MC02g1360 vs. ExPASy Swiss-Prot
Match: P0CD56 (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhB1 PE=3 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 4.3e-71
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 60
           AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN
Sbjct: 303 AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 362

Query: 61  LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 120
           LGTFA IVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW
Sbjct: 363 LGTFACIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 422

Query: 121 CGWQAGLYFLVSIGLLTSVV 141
           CGWQAGLYFLVSIGLLTSVV
Sbjct: 423 CGWQAGLYFLVSIGLLTSVV 442

[Close]

BLAST of MC02g1360 vs. NCBI nr
Match: WP_131770441.1 (hypothetical protein [Candidatus Frankia datiscae])

HSP 1 Score: 267 bits (682), Expect = 4.56e-88
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 60
           AILSMILGNLIAITQTSMKRMLAYSSIGQIGYV+IGIIVGDSNGGYASMITYMLFYISMN
Sbjct: 53  AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVMIGIIVGDSNGGYASMITYMLFYISMN 112

Query: 61  LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 120
           LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW
Sbjct: 113 LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 172

Query: 121 CGWQAGLYFLVSIGLLTSVV 140
           CGWQAGLYFLVSIGLLTSVV
Sbjct: 173 CGWQAGLYFLVSIGLLTSVV 192

[Close]

BLAST of MC02g1360 vs. NCBI nr
Match: QGA84943.1 (NADH-plastoquinone oxidoreductase subunit 2, partial [Senegalia ataxacantha])

HSP 1 Score: 265 bits (677), Expect = 7.94e-88
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 60
           AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN
Sbjct: 44  AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 103

Query: 61  LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 120
           LGTFA IVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW
Sbjct: 104 LGTFACIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 163

Query: 121 CGWQAGLYFLVSIGLLTSVV 140
           CGWQAGLYFLVSIGLLTSVV
Sbjct: 164 CGWQAGLYFLVSIGLLTSVV 183

[Close]

BLAST of MC02g1360 vs. NCBI nr
Match: WP_131747048.1 (hypothetical protein [Candidatus Frankia meridionalis])

HSP 1 Score: 266 bits (679), Expect = 1.30e-87
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 60
           AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITY LFYISMN
Sbjct: 53  AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYTLFYISMN 112

Query: 61  LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 120
           LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW
Sbjct: 113 LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 172

Query: 121 CGWQAGLYFLVSIGLLTSVV 140
           CGWQAGLYFLVSIGLLTSVV
Sbjct: 173 CGWQAGLYFLVSIGLLTSVV 192

[Close]

BLAST of MC02g1360 vs. NCBI nr
Match: QGA84937.1 (NADH-plastoquinone oxidoreductase subunit 2, partial [Pentaclethra macrophylla])

HSP 1 Score: 265 bits (677), Expect = 1.95e-87
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 60
           AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN
Sbjct: 44  AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 103

Query: 61  LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 120
           LGTFA IVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW
Sbjct: 104 LGTFACIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 163

Query: 121 CGWQAGLYFLVSIGLLTSVV 140
           CGWQAGLYFLVSIGLLTSVV
Sbjct: 164 CGWQAGLYFLVSIGLLTSVV 183

[Close]

BLAST of MC02g1360 vs. NCBI nr
Match: QGA84930.1 (NADH-plastoquinone oxidoreductase subunit 2, partial [Newtonia hildebrandtii] >QGA84934.1 NADH-plastoquinone oxidoreductase subunit 2, partial [Parkia panurensis])

HSP 1 Score: 265 bits (677), Expect = 1.95e-87
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 60
           AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN
Sbjct: 44  AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 103

Query: 61  LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 120
           LGTFA IVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW
Sbjct: 104 LGTFACIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 163

Query: 121 CGWQAGLYFLVSIGLLTSVV 140
           CGWQAGLYFLVSIGLLTSVV
Sbjct: 164 CGWQAGLYFLVSIGLLTSVV 183

[Close]

BLAST of MC02g1360 vs. ExPASy TrEMBL
Match: A0A5Q0UTW9 (NADH-plastoquinone oxidoreductase subunit 2 (Fragment) OS=Senegalia ataxacantha OX=875628 GN=ndhB PE=4 SV=1)

HSP 1 Score: 265 bits (677), Expect = 3.84e-88
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 60
           AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN
Sbjct: 44  AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 103

Query: 61  LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 120
           LGTFA IVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW
Sbjct: 104 LGTFACIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 163

Query: 121 CGWQAGLYFLVSIGLLTSVV 140
           CGWQAGLYFLVSIGLLTSVV
Sbjct: 164 CGWQAGLYFLVSIGLLTSVV 183

[Close]

BLAST of MC02g1360 vs. ExPASy TrEMBL
Match: A0A5Q0UUD8 (NADH-plastoquinone oxidoreductase subunit 2 (Fragment) OS=Newtonia hildebrandtii OX=148737 GN=ndhB PE=4 SV=1)

HSP 1 Score: 265 bits (677), Expect = 9.45e-88
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 60
           AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN
Sbjct: 44  AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 103

Query: 61  LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 120
           LGTFA IVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW
Sbjct: 104 LGTFACIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 163

Query: 121 CGWQAGLYFLVSIGLLTSVV 140
           CGWQAGLYFLVSIGLLTSVV
Sbjct: 164 CGWQAGLYFLVSIGLLTSVV 183

[Close]

BLAST of MC02g1360 vs. ExPASy TrEMBL
Match: A0A5Q0UTW3 (NADH-plastoquinone oxidoreductase subunit 2 (Fragment) OS=Parkia panurensis OX=883032 GN=ndhB PE=4 SV=1)

HSP 1 Score: 265 bits (677), Expect = 9.45e-88
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 60
           AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN
Sbjct: 44  AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 103

Query: 61  LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 120
           LGTFA IVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW
Sbjct: 104 LGTFACIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 163

Query: 121 CGWQAGLYFLVSIGLLTSVV 140
           CGWQAGLYFLVSIGLLTSVV
Sbjct: 164 CGWQAGLYFLVSIGLLTSVV 183

[Close]

BLAST of MC02g1360 vs. ExPASy TrEMBL
Match: A0A5Q0UTV6 (NADH-plastoquinone oxidoreductase subunit 2 (Fragment) OS=Pentaclethra macrophylla OX=148716 GN=ndhB PE=4 SV=1)

HSP 1 Score: 265 bits (677), Expect = 9.45e-88
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 60
           AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN
Sbjct: 44  AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 103

Query: 61  LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 120
           LGTFA IVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW
Sbjct: 104 LGTFACIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 163

Query: 121 CGWQAGLYFLVSIGLLTSVV 140
           CGWQAGLYFLVSIGLLTSVV
Sbjct: 164 CGWQAGLYFLVSIGLLTSVV 183

[Close]

BLAST of MC02g1360 vs. ExPASy TrEMBL
Match: A0A7T7CN33 (NADH-plastoquinone oxidoreductase subunit 2 OS=Rubus niveus OX=59495 GN=ndhB PE=4 SV=1)

HSP 1 Score: 265 bits (677), Expect = 3.17e-87
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 60
           AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN
Sbjct: 81  AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 140

Query: 61  LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 120
           LGTFA IVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW
Sbjct: 141 LGTFACIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 200

Query: 121 CGWQAGLYFLVSIGLLTSVV 140
           CGWQAGLYFLVSIGLLTSVV
Sbjct: 201 CGWQAGLYFLVSIGLLTSVV 220

[Close]

BLAST of MC02g1360 vs. TAIR 10
Match: ATCG00890.1 (NADH-Ubiquinone/plastoquinone (complex I) protein )

HSP 1 Score: 261.9 bits (668), Expect = 2.9e-70
Identity = 134/140 (95.71%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 60
           AILSMI GNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYI+MN
Sbjct: 180 AILSMIFGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYIAMN 239

Query: 61  LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 120
           LGTFA I+ FGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW
Sbjct: 240 LGTFACIILFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 299

Query: 121 CGWQAGLYFLVSIGLLTSVV 141
           CGWQAGLYFLVSIGLLTSV+
Sbjct: 300 CGWQAGLYFLVSIGLLTSVL 319

[Close]

BLAST of MC02g1360 vs. TAIR 10
Match: ATCG01250.1 (NADH-Ubiquinone/plastoquinone (complex I) protein )

HSP 1 Score: 261.9 bits (668), Expect = 2.9e-70
Identity = 134/140 (95.71%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 60
           AILSMI GNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYI+MN
Sbjct: 180 AILSMIFGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYIAMN 239

Query: 61  LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 120
           LGTFA I+ FGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW
Sbjct: 240 LGTFACIILFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 299

Query: 121 CGWQAGLYFLVSIGLLTSVV 141
           CGWQAGLYFLVSIGLLTSV+
Sbjct: 300 CGWQAGLYFLVSIGLLTSVL 319

[Close]

BLAST of MC02g1360 vs. TAIR 10
Match: AT2G07689.1 (NADH-Ubiquinone/plastoquinone (complex I) protein )

HSP 1 Score: 89.7 bits (221), Expect = 2.0e-18
Identity = 56/140 (40.00%), Postives = 80/140 (57.14%), Query Frame = 0


Query: 1   AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 60
           +I SMILG L A+ QT +KR LA+SSIG +GY+  G   G    G  S++  +  Y  M 
Sbjct: 51  SIASMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIE-GIQSLLIGIFIYALMT 110

Query: 61  LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 120
           +  FA IVS   +T    I D   L   +P  A++ ++ + S  G+PPLAGF  K +LF+
Sbjct: 111 MDAFA-IVSALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFF 170

Query: 121 CGWQAGLYFLVSIGLLTSVV 141
                G YFL  +G++TSV+
Sbjct: 171 AALGCGAYFLAPVGVVTSVI 188

[Close]

BLAST of MC02g1360 vs. TAIR 10
Match: ATMG00285.1 (NADH dehydrogenase 2A )

HSP 1 Score: 89.7 bits (221), Expect = 2.0e-18
Identity = 56/140 (40.00%), Postives = 80/140 (57.14%), Query Frame = 0


Query: 1   AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 60
           +I SMILG L A+ QT +KR LA+SSIG +GY+  G   G    G  S++  +  Y  M 
Sbjct: 298 SIASMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIE-GIQSLLIGIFIYALMT 357

Query: 61  LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 120
           +  FA IVS   +T    I D   L   +P  A++ ++ + S  G+PPLAGF  K +LF+
Sbjct: 358 MDAFA-IVSALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFF 417

Query: 121 CGWQAGLYFLVSIGLLTSVV 141
                G YFL  +G++TSV+
Sbjct: 418 AALGCGAYFLAPVGVVTSVI 435

[Close]

BLAST of MC02g1360 vs. TAIR 10
Match: ATMG01320.1 (NADH dehydrogenase 2B )

HSP 1 Score: 89.7 bits (221), Expect = 2.0e-18
Identity = 56/140 (40.00%), Postives = 80/140 (57.14%), Query Frame = 0


Query: 1   AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMN 60
           +I SMILG L A+ QT +KR LA+SSIG +GY+  G   G    G  S++  +  Y  M 
Sbjct: 298 SIASMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIE-GIQSLLIGIFIYALMT 357

Query: 61  LGTFARIVSFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFW 120
           +  FA IVS   +T    I D   L   +P  A++ ++ + S  G+PPLAGF  K +LF+
Sbjct: 358 MDAFA-IVSALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFF 417

Query: 121 CGWQAGLYFLVSIGLLTSVV 141
                G YFL  +G++TSV+
Sbjct: 418 AALGCGAYFLAPVGVVTSVI 435

The following BLAST results are available for this feature:

BLAST of MC02g1360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CC36	3.3e-71	99.29	NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Buxus microphylla O...	[more]
P0CC37	3.3e-71	99.29	NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Buxus microphylla O...	[more]
Q67IB2	3.3e-71	99.29	NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic OS=Muilla maritima OX=51...	[more]
Q67IE2	3.3e-71	99.29	NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic OS=Phormium tenax OX=514...	[more]
P0CD56	4.3e-71	99.29	NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Vitis vinifera OX=2...	[more]

BLAST of MC02g1360 vs. NCBI nr


Match Name	E-value	Identity	Description
WP_131770441.1	4.56e-88	99.29	hypothetical protein [Candidatus Frankia datiscae]	[more]
QGA84943.1	7.94e-88	99.29	NADH-plastoquinone oxidoreductase subunit 2, partial [Senegalia ataxacantha]	[more]
WP_131747048.1	1.30e-87	99.29	hypothetical protein [Candidatus Frankia meridionalis]	[more]
QGA84937.1	1.95e-87	99.29	NADH-plastoquinone oxidoreductase subunit 2, partial [Pentaclethra macrophylla]	[more]
QGA84930.1	1.95e-87	99.29	NADH-plastoquinone oxidoreductase subunit 2, partial [Newtonia hildebrandtii] >Q...	[more]

BLAST of MC02g1360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5Q0UTW9	3.84e-88	99.29	NADH-plastoquinone oxidoreductase subunit 2 (Fragment) OS=Senegalia ataxacantha ...	[more]
A0A5Q0UUD8	9.45e-88	99.29	NADH-plastoquinone oxidoreductase subunit 2 (Fragment) OS=Newtonia hildebrandtii...	[more]
A0A5Q0UTW3	9.45e-88	99.29	NADH-plastoquinone oxidoreductase subunit 2 (Fragment) OS=Parkia panurensis OX=8...	[more]
A0A5Q0UTV6	9.45e-88	99.29	NADH-plastoquinone oxidoreductase subunit 2 (Fragment) OS=Pentaclethra macrophyl...	[more]
A0A7T7CN33	3.17e-87	99.29	NADH-plastoquinone oxidoreductase subunit 2 OS=Rubus niveus OX=59495 GN=ndhB PE=...	[more]

BLAST of MC02g1360 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00890.1	2.9e-70	95.71	NADH-Ubiquinone/plastoquinone (complex I) protein	[more]
ATCG01250.1	2.9e-70	95.71	NADH-Ubiquinone/plastoquinone (complex I) protein	[more]
AT2G07689.1	2.0e-18	40.00	NADH-Ubiquinone/plastoquinone (complex I) protein	[more]
ATMG00285.1	2.0e-18	40.00	NADH dehydrogenase 2A	[more]
ATMG01320.1	2.0e-18	40.00	NADH dehydrogenase 2B	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001750	NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit	PFAM	PF00361	Proton_antipo_M	coord: 1..139 e-value: 6.8E-42 score: 143.7
None	No IPR available	PANTHER	PTHR22773	NADH DEHYDROGENASE	coord: 1..140
None	No IPR available	PANTHER	PTHR22773:SF104	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT 2 A, CHLOROPLASTIC-RELATED	coord: 1..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g1360.1	MC02g1360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane