MC02g1311 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC02g1311
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC02: 13890670 .. 13890876 (+)
RNA-Seq ExpressionMC02g1311
SyntenyMC02g1311
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CGCAATTCAAACAGCCAAATAATGAAGCTAGGGCAGAGTTTCATTTCGAACGAATGTGGCAACAAATGGTTTGGATGACGTATTTTGTGGCACAAAATCATCAAAGAGAAGAAGGAATTCTTCAGTTATTCTATTGTTGAATTATTGAATTATTCTTATAATTCGAATGCTTACCAGATGAATTTCGATCATGGAATCGGAGGCTCA

mRNA sequence

CGCAATTCAAACAGCCAAATAATGAAGCTAGGGCAGAGTTTCATTTCGAACGAATGTGGCAACAAATGGTTTGGATGACGTATTTTGTGGCACAAAATCATCAAAGAGAAGAAGGAATTCTTCAGTTATTCTATTGTTGAATTATTGAATTATTCTTATAATTCGAATGCTTACCAGATGAATTTCGATCATGGAATCGGAGGCTCA

Coding sequence (CDS)

CGCAATTCAAACAGCCAAATAATGAAGCTAGGGCAGAGTTTCATTTCGAACGAATGTGGCAACAAATGGTTTGGATGACGTATTTTGTGGCACAAAATCATCAAAGAGAAGAAGGAATTCTTCAGTTATTCTATTGTTGAATTATTGAATTATTCTTATAATTCGAATGCTTACCAGATGAATTTCGATCATGGAATCGGAGGCTCA

Protein sequence

RNSNSQIMKLGQSFISNECGNKWFGURILWHKIIKEKKEFFSYSIVELLNYSYNSNAYQMNFDHGIGGS
Homology
[Close]
BLAST of MC02g1311 vs. NCBI nr
Match: KGN60340.2 (hypothetical protein Csa_000895 [Cucumis sativus])

HSP 1 Score: 62.4 bits (150), Expect = 3.15e-09
Identity = 36/64 (56.25%), Postives = 46/64 (71.88%), Query Frame = 0 

Query: 1    RNSNSQIMKLGQSFIS-NECGNKWFGXRILWHKIIKEKKEFFSYSIVELLNYSYNSNAYQ 60
            RNS SQ ++LGQS +S NE  +K  G +ILW K+ KEK++ FS S VEL + SYN NAY 
Sbjct: 1035 RNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKEKRKMFSCSSVELRS-SYNPNAYH 1094

Query: 61   MNFD 63
            +NFD
Sbjct: 1095 LNFD 1097

[Close]
BLAST of MC02g1311 vs. NCBI nr
Match: KAF5726889.1 (hypothetical protein HS088_TW22G00574 [Tripterygium wilfordii])

HSP 1 Score: 45.8 bits (107), Expect = 5.52e-04
Identity = 20/39 (51.28%), Postives = 28/39 (71.79%), Query Frame = 0 

Query: 27 RILWHKIIKEKKEFFSYSIVELLNYSYNSNAYQMNFDHG 65
          R+LW KI+KE+K+ F+     +L+YSY+  AY MNFD G
Sbjct: 39 RVLWRKIVKERKKMFNCLSSPVLHYSYDPYAYSMNFDQG 77

[Close]
BLAST of MC02g1311 vs. ExPASy TrEMBL
Match: A0A0A0LJH9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G888550 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.84e-11
Identity = 36/64 (56.25%), Postives = 46/64 (71.88%), Query Frame = 0 

Query: 1  RNSNSQIMKLGQSFIS-NECGNKWFGXRILWHKIIKEKKEFFSYSIVELLNYSYNSNAYQ 60
          RNS SQ ++LGQS +S NE  +K  G +ILW K+ KEK++ FS S VEL + SYN NAY 
Sbjct: 6  RNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKEKRKMFSCSSVELRS-SYNPNAYH 65

Query: 61 MNFD 63
          +NFD
Sbjct: 66 LNFD 68

[Close]
BLAST of MC02g1311 vs. ExPASy TrEMBL
Match: A0A7J7BYB4 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW22G00574 PE=4 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 2.67e-04
Identity = 20/39 (51.28%), Postives = 28/39 (71.79%), Query Frame = 0 

Query: 27 RILWHKIIKEKKEFFSYSIVELLNYSYNSNAYQMNFDHG 65
          R+LW KI+KE+K+ F+     +L+YSY+  AY MNFD G
Sbjct: 39 RVLWRKIVKERKKMFNCLSSPVLHYSYDPYAYSMNFDQG 77

The following BLAST results are available for this feature:
BLAST of MC02g1311 vs.
Match NameE-valueIdentityDescription
BLAST of MC02g1311 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60340.23.15e-0956.25hypothetical protein Csa_000895 [Cucumis sativus][more]
KAF5726889.15.52e-0451.28hypothetical protein HS088_TW22G00574 [Tripterygium wilfordii][more]
BLAST of MC02g1311 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJH96.84e-1156.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G888550 PE=4 SV=1[more]
A0A7J7BYB42.67e-0451.28Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW22G00574 ... [more]
BLAST of MC02g1311 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC02g1311.1MC02g1311.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane