MC02g1041 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g1041
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	PAMP-induced secreted peptide 2
Location	MC02: 8473192 .. 8473464 (+)
RNA-Seq Expression	MC02g1041
Synteny	MC02g1041

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAAGATTTTGAGCCTCATTCTTGTTTTTTCGCTACTGAGTAATGGAAGTTTGCTTGGAATAATGGTAGAAGCCAGGCCTCTCAATATGGTCGGCACCGCAGTTGCCGAGGATTTCTTTGCTGGATTATCCCTCGGAGCCAGCAAGCAGTCCGGTCCAAGCCCGGGCGGGGATGGCCACGCATTCACCAACGTCGATACTCTCGGCGGTATCAAGGACTCTGGCCCGAGCCCCGGGGTTGGGCACAGCCAAGTCTCCGGCCAGCACCAC

mRNA sequence

ATGATGAAGATTTTGAGCCTCATTCTTGTTTTTTCGCTACTGAGTAATGGAAGTTTGCTTGGAATAATGGTAGAAGCCAGGCCTCTCAATATGGTCGGCACCGCAGTTGCCGAGGATTTCTTTGCTGGATTATCCCTCGGAGCCAGCAAGCAGTCCGGTCCAAGCCCGGGCGGGGATGGCCACGCATTCACCAACGTCGATACTCTCGGCGGTATCAAGGACTCTGGCCCGAGCCCCGGGGTTGGGCACAGCCAAGTCTCCGGCCAGCACCAC

Coding sequence (CDS)

ATGATGAAGATTTTGAGCCTCATTCTTGTTTTTTCGCTACTGAGTAATGGAAGTTTGCTTGGAATAATGGTAGAAGCCAGGCCTCTCAATATGGTCGGCACCGCAGTTGCCGAGGATTTCTTTGCTGGATTATCCCTCGGAGCCAGCAAGCAGTCCGGTCCAAGCCCGGGCGGGGATGGCCACGCATTCACCAACGTCGATACTCTCGGCGGTATCAAGGACTCTGGCCCGAGCCCCGGGGTTGGGCACAGCCAAGTCTCCGGCCAGCACCAC

Protein sequence

MMKILSLILVFSLLSNGSLLGIMVEARPLNMVGTAVAEDFFAGLSLGASKQSGPSPGGDGHAFTNVDTLGGIKDSGPSPGVGHSQVSGQHH

Homology

[Close]

BLAST of MC02g1041 vs. ExPASy Swiss-Prot
Match: F4JRC5 (PAMP-induced secreted peptide 2 OS=Arabidopsis thaliana OX=3702 GN=PIP2 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 2.7e-05
Identity = 36/83 (43.37%), Postives = 45/83 (54.22%), Query Frame = 0


Query: 4  ILSLILVFSLLSNGSLLGIMVEARPLNMVGT--AVAEDFFAGLSLGASKQSGPSPGGDGH 63
          +LS IL F L+ +     ++VE+RPL +  T        F GLSLG+ K SGPSPG    
Sbjct: 7  VLSSILFFMLIGS-----VLVESRPLGLTKTEEKFVASLFDGLSLGSIKDSGPSPGEGHK 66

Query: 64 AFTNVDTLGGIKDSGPSP-GVGH 84
               DT   +K SGPSP G GH
Sbjct: 67 VVDRKDTFRFVKHSGPSPSGPGH 84

[Close]

BLAST of MC02g1041 vs. NCBI nr
Match: TYK12857.1 (hypothetical protein E5676_scaffold255G004490 [Cucumis melo var. makuwa])

HSP 1 Score: 108 bits (271), Expect = 1.17e-28
Identity = 58/89 (65.17%), Postives = 68/89 (76.40%), Query Frame = 0


Query: 7  LILVFSLLSNGSLLGIMVEARPLNMVGT----AVAEDFFAGLSLGASKQSGPSPGGDGHA 66
          LILV +LL NG L+ I+ EARPL ++G+    A+AEDFF GLSLGA KQSGPS GGDGH 
Sbjct: 8  LILVVALLDNGGLV-IVTEARPLGLMGSGSAAAIAEDFFEGLSLGAIKQSGPSAGGDGHK 67

Query: 67 FTNVDTLGGIKDSGPSPGVGHSQVSGQHH 91
          F N DT GG+KDSGP+PG GHS V+  HH
Sbjct: 68 FVNYDTFGGMKDSGPTPGDGHSHVTSSHH 95

[Close]

BLAST of MC02g1041 vs. NCBI nr
Match: KAG6595008.1 (PAMP-induced secreted peptide 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027036.1 hypothetical protein SDJN02_11045, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 104 bits (259), Expect = 7.87e-27
Identity = 58/83 (69.88%), Postives = 65/83 (78.31%), Query Frame = 0


Query: 7  LILVFSLLS-NGSLLGIMVEARPLN-MVGTAVAEDFFAGLSLGASKQSGPSPGGDGHAFT 66
          LILV +LL+ NG L  +  EARPLN M   A+AEDFF GLSLGA KQSGPSPGGDGH F 
Sbjct: 11 LILVAALLAGNGGL--VATEARPLNAMASAAIAEDFFEGLSLGAIKQSGPSPGGDGHKFV 70

Query: 67 NVDTLGGIKDSGPSPGVGHSQVS 87
          N DTLGGIK+SGPSPG GHS ++
Sbjct: 71 NFDTLGGIKESGPSPGDGHSHIT 91

[Close]

BLAST of MC02g1041 vs. NCBI nr
Match: KAE8647505.1 (hypothetical protein Csa_003084 [Cucumis sativus])

HSP 1 Score: 100 bits (249), Expect = 3.58e-25
Identity = 55/90 (61.11%), Postives = 66/90 (73.33%), Query Frame = 0


Query: 8   ILVFSLLSNGSLLGIMVEARPLNMV----GTA--VAEDFFAGLSLGASKQSGPSPGGDGH 67
           ILV +LL NG L+ +  +ARPL ++    G+A  +AEDFF GLSLGA KQSGPS GGDGH
Sbjct: 18  ILVAALLGNGGLVTVT-DARPLTLMRLGSGSAATIAEDFFEGLSLGAIKQSGPSAGGDGH 77

Query: 68  AFTNVDTLGGIKDSGPSPGVGHSQVSGQHH 91
            F N DTLGGIKDSGP+PG GH  ++  HH
Sbjct: 78  KFVNYDTLGGIKDSGPAPGDGHRHITSSHH 106

[Close]

BLAST of MC02g1041 vs. NCBI nr
Match: XP_030477329.1 (PAMP-induced secreted peptide 2-like isoform X2 [Syzygium oleosum])

HSP 1 Score: 82.0 bits (201), Expect = 5.20e-18
Identity = 43/69 (62.32%), Postives = 49/69 (71.01%), Query Frame = 0


Query: 25 EARPLNMVGT-----AVAEDFFAGLSLGASKQSGPSPGGDGHAFTNVDTLGGIKDSGPSP 84
          EARP N++ T          FF GLSLGA KQ+GPSPG +GH FTN +TLGGIKDSGPSP
Sbjct: 25 EARPFNVMETKAPVGVACGGFFDGLSLGAIKQAGPSPG-EGHKFTNSETLGGIKDSGPSP 84

Query: 85 GVGHSQVSG 88
          G GH  V+G
Sbjct: 85 GEGHGHVTG 92

[Close]

BLAST of MC02g1041 vs. NCBI nr
Match: KCW59487.1 (hypothetical protein EUGRSUZ_H02229 [Eucalyptus grandis])

HSP 1 Score: 82.0 bits (201), Expect = 5.20e-18
Identity = 43/69 (62.32%), Postives = 49/69 (71.01%), Query Frame = 0


Query: 25 EARPLNMVGT-----AVAEDFFAGLSLGASKQSGPSPGGDGHAFTNVDTLGGIKDSGPSP 84
          EARP N++ T          FF GLSLGA KQ+GPSPG +GH FTN +TLGGIKDSGPSP
Sbjct: 25 EARPFNVMETKAPVGVACGGFFDGLSLGAIKQAGPSPG-EGHKFTNSETLGGIKDSGPSP 84

Query: 85 GVGHSQVSG 88
          G GH  V+G
Sbjct: 85 GEGHGHVTG 92

[Close]

BLAST of MC02g1041 vs. ExPASy TrEMBL
Match: A0A5D3CLN9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004490 PE=4 SV=1)

HSP 1 Score: 108 bits (271), Expect = 5.67e-29
Identity = 58/89 (65.17%), Postives = 68/89 (76.40%), Query Frame = 0


Query: 7  LILVFSLLSNGSLLGIMVEARPLNMVGT----AVAEDFFAGLSLGASKQSGPSPGGDGHA 66
          LILV +LL NG L+ I+ EARPL ++G+    A+AEDFF GLSLGA KQSGPS GGDGH 
Sbjct: 8  LILVVALLDNGGLV-IVTEARPLGLMGSGSAAAIAEDFFEGLSLGAIKQSGPSAGGDGHK 67

Query: 67 FTNVDTLGGIKDSGPSPGVGHSQVSGQHH 91
          F N DT GG+KDSGP+PG GHS V+  HH
Sbjct: 68 FVNYDTFGGMKDSGPTPGDGHSHVTSSHH 95

[Close]

BLAST of MC02g1041 vs. ExPASy TrEMBL
Match: A0A0A0KIE2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G491710 PE=4 SV=1)

HSP 1 Score: 100 bits (249), Expect = 1.46e-25
Identity = 55/90 (61.11%), Postives = 66/90 (73.33%), Query Frame = 0


Query: 8   ILVFSLLSNGSLLGIMVEARPLNMV----GTA--VAEDFFAGLSLGASKQSGPSPGGDGH 67
           ILV +LL NG L+ +  +ARPL ++    G+A  +AEDFF GLSLGA KQSGPS GGDGH
Sbjct: 12  ILVAALLGNGGLVTVT-DARPLTLMRLGSGSAATIAEDFFEGLSLGAIKQSGPSAGGDGH 71

Query: 68  AFTNVDTLGGIKDSGPSPGVGHSQVSGQHH 91
            F N DTLGGIKDSGP+PG GH  ++  HH
Sbjct: 72  KFVNYDTLGGIKDSGPAPGDGHRHITSSHH 100

[Close]

BLAST of MC02g1041 vs. ExPASy TrEMBL
Match: A0A059AZU8 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H02229 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.52e-18
Identity = 43/69 (62.32%), Postives = 49/69 (71.01%), Query Frame = 0


Query: 25 EARPLNMVGT-----AVAEDFFAGLSLGASKQSGPSPGGDGHAFTNVDTLGGIKDSGPSP 84
          EARP N++ T          FF GLSLGA KQ+GPSPG +GH FTN +TLGGIKDSGPSP
Sbjct: 25 EARPFNVMETKAPVGVACGGFFDGLSLGAIKQAGPSPG-EGHKFTNSETLGGIKDSGPSP 84

Query: 85 GVGHSQVSG 88
          G GH  V+G
Sbjct: 85 GEGHGHVTG 92

[Close]

BLAST of MC02g1041 vs. ExPASy TrEMBL
Match: D7TTE3 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0129g01010 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.41e-17
Identity = 44/76 (57.89%), Postives = 48/76 (63.16%), Query Frame = 0


Query: 22 IMVEARPLNMVGTAVAED------FFAGLSLGASKQSGPSPGGDGHAFTNVDTLGGIKDS 81
          I +  RP N++      D      FF GLSLGA KQSGPSPG +GH FTN  TLGGIKDS
Sbjct: 20 IAIHGRPFNVLKKPRGPDGEEMRGFFDGLSLGAIKQSGPSPG-NGHKFTNAGTLGGIKDS 79

Query: 82 GPSPGVGHSQVSGQHH 91
          GPSPG GH  V G  H
Sbjct: 80 GPSPGEGHKYVDGMPH 94

[Close]

BLAST of MC02g1041 vs. ExPASy TrEMBL
Match: A0A438FBB4 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_099687 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.41e-17
Identity = 44/76 (57.89%), Postives = 48/76 (63.16%), Query Frame = 0


Query: 22 IMVEARPLNMVGTAVAED------FFAGLSLGASKQSGPSPGGDGHAFTNVDTLGGIKDS 81
          I +  RP N++      D      FF GLSLGA KQSGPSPG +GH FTN  TLGGIKDS
Sbjct: 20 IAIHGRPFNVLKKPRGPDGEEMRGFFDGLSLGAIKQSGPSPG-NGHKFTNAGTLGGIKDS 79

Query: 82 GPSPGVGHSQVSGQHH 91
          GPSPG GH  V G  H
Sbjct: 80 GPSPGEGHKYVDGMPH 94

[Close]

BLAST of MC02g1041 vs. TAIR 10
Match: AT2G23270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, sperm cell, root, stamen; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37290.1); Has 36 Blast hits to 35 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 3.9e-07
Identity = 39/84 (46.43%), Postives = 49/84 (58.33%), Query Frame = 0


Query: 4  ILSLILVFSLLSNGSLLGIMVEARPLNMVGTA--VAEDFFAGLSLGASKQSGPSPGGDGH 63
          +L   L F L+S+      +VEARPL +      +   FF GLSLGA K+SGPS GG+GH
Sbjct: 7  VLGSFLFFMLVSS----NFVVEARPLGLTKAEENLVAKFFDGLSLGAIKESGPSSGGEGH 66

Query: 64 AFTN-VDTLGGIKDSGPS-PGVGH 84
           F +  +TL   K SGPS  G GH
Sbjct: 67 RFVDRTETLEYGKHSGPSTSGPGH 86

[Close]

BLAST of MC02g1041 vs. TAIR 10
Match: AT4G37290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: endomembrane system; EXPRESSED IN: cotyledon, hypocotyl, leaf; EXPRESSED DURING: LP.04 four leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 1.9e-06
Identity = 36/83 (43.37%), Postives = 45/83 (54.22%), Query Frame = 0


Query: 4  ILSLILVFSLLSNGSLLGIMVEARPLNMVGT--AVAEDFFAGLSLGASKQSGPSPGGDGH 63
          +LS IL F L+ +     ++VE+RPL +  T        F GLSLG+ K SGPSPG    
Sbjct: 7  VLSSILFFMLIGS-----VLVESRPLGLTKTEEKFVASLFDGLSLGSIKDSGPSPGEGHK 66

Query: 64 AFTNVDTLGGIKDSGPSP-GVGH 84
               DT   +K SGPSP G GH
Sbjct: 67 VVDRKDTFRFVKHSGPSPSGPGH 84

[Close]

BLAST of MC02g1041 vs. TAIR 10
Match: AT1G49800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, stamen; EXPRESSED DURING: 4 anthesis; Has 12 Blast hits to 12 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 40.4 bits (93), Expect = 8.9e-04
Identity = 21/38 (55.26%), Postives = 21/38 (55.26%), Query Frame = 0


Query: 46  LGASKQSGPSPGGDGHAFTNVDTLGGIKDSGPSPGVGH 84
           L   KQSGPSPG   H        G   DSGPSPGVGH
Sbjct: 71  LATVKQSGPSPGVGHHRAKGYKMFGRANDSGPSPGVGH 108

The following BLAST results are available for this feature:

BLAST of MC02g1041 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JRC5	2.7e-05	43.37	PAMP-induced secreted peptide 2 OS=Arabidopsis thaliana OX=3702 GN=PIP2 PE=1 SV=...	[more]

BLAST of MC02g1041 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK12857.1	1.17e-28	65.17	hypothetical protein E5676_scaffold255G004490 [Cucumis melo var. makuwa]	[more]
KAG6595008.1	7.87e-27	69.88	PAMP-induced secreted peptide 2, partial [Cucurbita argyrosperma subsp. sororia]...	[more]
KAE8647505.1	3.58e-25	61.11	hypothetical protein Csa_003084 [Cucumis sativus]	[more]
XP_030477329.1	5.20e-18	62.32	PAMP-induced secreted peptide 2-like isoform X2 [Syzygium oleosum]	[more]
KCW59487.1	5.20e-18	62.32	hypothetical protein EUGRSUZ_H02229 [Eucalyptus grandis]	[more]

BLAST of MC02g1041 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CLN9	5.67e-29	65.17	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KIE2	1.46e-25	61.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G491710 PE=4 SV=1	[more]
A0A059AZU8	2.52e-18	62.32	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H02229 PE=4 SV...	[more]
D7TTE3	1.41e-17	57.89	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0129g01010 PE=4 SV=...	[more]
A0A438FBB4	1.41e-17	57.89	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_099687 PE=4 SV=1	[more]

BLAST of MC02g1041 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23270.1	3.9e-07	46.43	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G37290.1	1.9e-06	43.37	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT1G49800.1	8.9e-04	55.26	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..91
IPR044700	PIP2/PIPL1	PANTHER	PTHR34663	OS06G0637400 PROTEIN	coord: 2..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g1041.1	MC02g1041.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045087	innate immune response
biological_process	GO:0050793	regulation of developmental process