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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. AATCATGTATGCATGTATATGAGCAATGGTAACCAAATTTTCTCAGATGGAAAAGAAAATTCAAGAAAATTTCCTGGAAAGTTCTCTCTTGAAATTAAAACACTAATGTAATCCAATCAATCAAAACCCTCATTAGGAATTTTGGAAAAAAAATATACATATAAGTGAAATATTCATTAGTTATAATTTCTTGAACAAAATCTCAATATATTTACATCTGGAAGATCATTTGAAACGTATAATAACCCTCCATTTCCAACAGTGCAATCAAGAACAAAAATCACCCAAAAAAAAAAAGAATATATGAAGAAAAAGAAGAAGAAATTTGATGGAATTATTTTCCAATAATAATTATCTTCTTCTTCTATTAATTTACTTATCTGTTGTGGAGAGGATTTGGGCCAGTGTAGACTCGTCTCTTCTGAGCAGCAAACACGGCGGCGCCGCGGTCGGATTTTGCAGCGGCGTGGCGCTTGGGGCGGACCACGGCGGCGGCGGAGGTGGGTCTTTCTCTTTCCTTGGAGGGAAGAAGAAGAAGAAAAAGAATAAGGAAAAAAAACAAAGTTGCAAGCTCTGTTAAGTTCTTCAGCCTCATCTCTCTCTCTCCCTCTCTCTAAAGTTGATGCCTTTGGGTTAATGGGTCTTTATCTTTTCAGTTGAAATCAAAACCATCCATTTTCTCTCTCTAGTTTAAGAGATTTCAAGGTTTTTTTCTCTCTCTCTCTAGAATTG mRNA sequence ATGGAATTATTTTCCAATAATAATTATCTTCTTCTTCTATTAATTTACTTATCTGTTGTGGAGAGGATTTGGGCCAGTGTAGACTCGTCTCTTCTGAGCAGCAAACACGGCGGCGCCGCGGTCGGATTTTGCAGCGGCGTGGCGCTTGGGGCGGACCACGGCGGCGGCGGAGGTGGGTCTTTCTCTTTCCTTGGAGGGAAGAAGAAGAAGAAAAAGAATAAGGAAAAAAAACAAAGTTGCAAGCTCTGTTAA Coding sequence (CDS) ATGGAATTATTTTCCAATAATAATTATCTTCTTCTTCTATTAATTTACTTATCTGTTGTGGAGAGGATTTGGGCCAGTGTAGACTCGTCTCTTCTGAGCAGCAAACACGGCGGCGCCGCGGTCGGATTTTGCAGCGGCGTGGCGCTTGGGGCGGACCACGGCGGCGGCGGAGGTGGGTCTTTCTCTTTCCTTGGAGGGAAGAAGAAGAAGAAAAAGAATAAGGAAAAAAAACAAAGTTGCAAGCTCTGTTAA Protein sequence MELFSNNNYLLLLLIYLSVVERIWASVDSSLLSSKHGGAAVGFCSGVALGADHGGGGGGSFSFLGGKKKKKKNKEKKQSCKLC
Homology
BLAST of MC01g_new0227 vs. NCBI nr
Match: KAG6603294.1 (hypothetical protein SDJN03_03903, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 52.8 bits (125), Expect = 1.21e-06 Identity = 36/67 (53.73%), Postives = 43/67 (64.18%), Query Frame = 0 Query: 20 VERIWASVDSSLLSSKHGGAAVGFCSGVALGADHGGGGGGSFSFLGG----KKKKKKNKE 79 ++RIW VDSSLL SKHGGA + GV G D+GG GGG S GG + KKK K+ Sbjct: 1 MKRIWTGVDSSLLRSKHGGATI---VGVGSGVDNGGNGGGGGSSGGGIDDDRGGKKKKKK 60
Query: 80 KKQSCKL 82 KKQ+ KL Sbjct: 61 KKQADKL 64
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6603294.1 | 1.21e-06 | 53.73 | hypothetical protein SDJN03_03903, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 65..83 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 62..83 |
Relationships
The following mRNA feature(s) are a part of this gene:
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