Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTCTCCCAGTCATGAGTGCACGTGTCTAGGAGTTGCTGTGTTAACCTTGGGGGGCGAACAGTTGATTTTCGATTGCACCACGGTCGAGCCGGATTTTCGCTTTCAAGGCAGTGGTTTTTTCACGGCACAGCATAATTTCAATTCATATTTTCTGATTTTTCCAACAAAAATTACAAGGAGATGCATACAAAGAACTGCAACAAAGGTTTTTCAAAGTCGTTACTACTGGCCCTCAGTATTCAAGGATGCCCACGCCTTTGTGAAGAGCTGTGATAGATGTCAACATATGGGATATATTTCCAATAAGTCGTAAATGCCTTTAAATTTCATCTTAGAAATTGGACTGTTCGATGTTTGGGGAATAGACTTTATGGGGCCTTCCCATCGTGCAATGGCAACTTATTCATTCTTCTAGCAGTAGACTATAGTAGAGGCCAAAACTTGTGCCACTAGTGATGCCAAGGTGGTTCTCAAATTTTTACACAAGAACATCTTTATGAGGTTTGGAACACCGAGAGTATTGATAAGTGATGAAGGATCTCACTTTGTTAACAGAGCTATGACTGTGTTGCGTTGCTTGAAGGGTATAGTTTTGCTCGTGGACAAGCAAGGTCTTCAGTTTTCGTAGTCTTATTTTGAGTTTATATGGTTATAATTGTGAGTGTGCTTTCCTTATATTACTTTAATGCATAATTAATAGGAGAAGTATGAAAAAGAATCCCTTTGTATACTTGTTTTGAAAGATTTGAAAGATTCGGCTTAGTACTTGCTTCTTTTGATCTCTCGTGCAGAAATTGTTGGAGCATCAGAAGCAGAGCAACAAAGATGGATAGATAAGGCCAGGACAACATCGAAAGTACGAAAAAATAGGGCAACGCAGTAACTTACTTTCATGTGGATTTTTACCAAATTTCCACACACCTGTTATCCGTTGCCCTAAAATTAGAAGATGGTCCAAAAGCAAGAAGAATCGCAGCTGACAACATCGATCTCAAAGAGAATTATTCGAAAAAGGACCAAAAAGAGAGGAGAGAACTTACCTTCAATAGCAGGAGACCTTCGAATTTCTACGAAGACTAGAGGAAGCTTTTAGTTCTTTGTTATTTTCGCAGAAATTGATTGTTCTCTTTTATTTTCTTTTATGTTTTCCTCAACCCTGGTGAGTTAAATTCCATTTTGGGGGAGGTTGTAAACTTTTGCTGTAAACAATAGTTGCTATAGCTCGATTTTGTAAGCTGTTAAGTATAGTTGTTAGTATTTCTTAACTCTTTGAATTTGTTGGTCATCATTTTTGGATTGCTTGCTCTTACATGATTTGGAAAAATATATGAGATGCCTGATTGGCTCTACTTGAT
mRNA sequence
ATGAGGTTTGGAACACCGAGAGTATTGATAAGTGATGAAGGATCTCACTTTGTTAACAGAGCTATGACTGTGTTGCGTTGCTTGAAGGGTATAGTTTTGCTCGTGGACAAGCAAGAAATTGTTGGAGCATCAGAAGCAGAGCAACAAAGATGGATAGATAAGGCCAGGACAACATCGAAAGTACGAAAAAATAGGGCAACGCAGTAA
Coding sequence (CDS)
ATGAGGTTTGGAACACCGAGAGTATTGATAAGTGATGAAGGATCTCACTTTGTTAACAGAGCTATGACTGTGTTGCGTTGCTTGAAGGGTATAGTTTTGCTCGTGGACAAGCAAGAAATTGTTGGAGCATCAGAAGCAGAGCAACAAAGATGGATAGATAAGGCCAGGACAACATCGAAAGTACGAAAAAATAGGGCAACGCAGTAA
Protein sequence
MRFGTPRVLISDEGSHFVNRAMTVLRCLKGIVLLVDKQEIVGASEAEQQRWIDKARTTSKVRKNRATQ
Homology
BLAST of MC01g_new0146 vs. NCBI nr
Match:
RDX78157.1 (hypothetical protein CR513_41613, partial [Mucuna pruriens])
HSP 1 Score: 44.3 bits (103), Expect = 8.16e-04
Identity = 19/31 (61.29%), Postives = 23/31 (74.19%), Query Frame = 0
Query: 2 RFGTPRVLISDEGSHFVNRAMTVLRCLKGIV 32
+FG P+VLISD+GSHF NRAM L G+V
Sbjct: 24 KFGVPKVLISDQGSHFYNRAMATLLKKYGVV 54
BLAST of MC01g_new0146 vs. NCBI nr
Match:
RDY11541.1 (Gag-Pol polyprotein, partial [Mucuna pruriens])
HSP 1 Score: 45.4 bits (106), Expect = 9.05e-04
Identity = 20/34 (58.82%), Postives = 26/34 (76.47%), Query Frame = 0
Query: 2 RFGTPRVLISDEGSHFVNRAMTVLRCLKGIVLLV 35
RFG +VLISD+GSHF NRAM+ LR G+V ++
Sbjct: 60 RFGVSKVLISDQGSHFYNRAMSSLRNKYGVVHII 93
BLAST of MC01g_new0146 vs. ExPASy TrEMBL
Match:
A0A371FIL7 (Integrase catalytic domain-containing protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_41613 PE=4 SV=1)
HSP 1 Score: 44.3 bits (103), Expect = 3.95e-04
Identity = 19/31 (61.29%), Postives = 23/31 (74.19%), Query Frame = 0
Query: 2 RFGTPRVLISDEGSHFVNRAMTVLRCLKGIV 32
+FG P+VLISD+GSHF NRAM L G+V
Sbjct: 24 KFGVPKVLISDQGSHFYNRAMATLLKKYGVV 54
BLAST of MC01g_new0146 vs. ExPASy TrEMBL
Match:
A0A371I922 (Gag-Pol polyprotein (Fragment) OS=Mucuna pruriens OX=157652 GN=gag-pol PE=4 SV=1)
HSP 1 Score: 45.4 bits (106), Expect = 4.38e-04
Identity = 20/34 (58.82%), Postives = 26/34 (76.47%), Query Frame = 0
Query: 2 RFGTPRVLISDEGSHFVNRAMTVLRCLKGIVLLV 35
RFG +VLISD+GSHF NRAM+ LR G+V ++
Sbjct: 60 RFGVSKVLISDQGSHFYNRAMSSLRNKYGVVHII 93
BLAST of MC01g_new0146 vs. ExPASy TrEMBL
Match:
A0A371HDE5 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_15932 PE=4 SV=1)
HSP 1 Score: 44.3 bits (103), Expect = 6.07e-04
Identity = 19/40 (47.50%), Postives = 27/40 (67.50%), Query Frame = 0
Query: 3 FGTPRVLISDEGSHFVNRAMTVLRCLKGIVLLVDKQEIVG 42
FG P+ LI+D+GSHF NR+M +L G++ L + IVG
Sbjct: 28 FGVPKALINDQGSHFYNRSMAMLLEKYGMITLAHYKPIVG 67
BLAST of MC01g_new0146 vs. ExPASy TrEMBL
Match:
A0A371I4Q9 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_05573 PE=4 SV=1)
HSP 1 Score: 45.4 bits (106), Expect = 6.46e-04
Identity = 26/69 (37.68%), Postives = 37/69 (53.62%), Query Frame = 0
Query: 2 RFGTPRVLISDEGSHFVNRAMTVLRCLKGIVLLVDK------------QEIVGASEAEQQ 58
RFG +VLISD+GSHF NRAM + LK I + + ++G S + +
Sbjct: 67 RFGVSKVLISDQGSHFYNRAMAIY--LKNIEWCTESPLHITLKPVAKMKSLIGKSRSYYR 126
BLAST of MC01g_new0146 vs. ExPASy TrEMBL
Match:
A0A5A7VHS5 (Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00490 PE=4 SV=1)
HSP 1 Score: 45.4 bits (106), Expect = 7.66e-04
Identity = 19/24 (79.17%), Postives = 20/24 (83.33%), Query Frame = 0
Query: 2 RFGTPRVLISDEGSHFVNRAMTVL 25
RFGTPR LISDEGSHF+NR M L
Sbjct: 128 RFGTPRTLISDEGSHFINRIMAKL 151
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
RDX78157.1 | 8.16e-04 | 61.29 | hypothetical protein CR513_41613, partial [Mucuna pruriens] | [more] |
RDY11541.1 | 9.05e-04 | 58.82 | Gag-Pol polyprotein, partial [Mucuna pruriens] | [more] |
Match Name | E-value | Identity | Description | |
A0A371FIL7 | 3.95e-04 | 61.29 | Integrase catalytic domain-containing protein (Fragment) OS=Mucuna pruriens OX=1... | [more] |
A0A371I922 | 4.38e-04 | 58.82 | Gag-Pol polyprotein (Fragment) OS=Mucuna pruriens OX=157652 GN=gag-pol PE=4 SV=1 | [more] |
A0A371HDE5 | 6.07e-04 | 47.50 | Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_15932 P... | [more] |
A0A371I4Q9 | 6.46e-04 | 37.68 | Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_05573 P... | [more] |
A0A5A7VHS5 | 7.66e-04 | 79.17 | Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=119... | [more] |
Match Name | E-value | Identity | Description | |