MC01g1654 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g1654
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC01: 20693038 .. 20693415 (+)
RNA-Seq Expression	MC01g1654
Synteny	MC01g1654

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGCAAATGTGGCTTCTGTGGTGGCCGAAGACCGTCTCCGCCGGCGGCAAAACTACCACATCCTCCGCCACCGCCGCGGTAACTGCGACTTCCCTCGCCAAAAAGGCGTCCCCCTCCTCTCACTGCAACTGCGTCGCCAAACTGTTGCGGAAACTGAAGAAACGAGGGCGAGTTTTATGCAGCACTAGTGGAGAGAGCAGCGCGTTCCAGTGCCGGTACGATCCGCTGAGCTACTCTCTCAACTTTGACACCAGCGGCTGCGGAAGCTTGTTAGACGAAGATTACTATCAGTTCTGCGCGTTCTCTTCCAGATTCGCGTCAAATCCAGGAAATGCTTCTCATTCTGTCCCTGATGTAACAGTCACTGCTTCGCGC

mRNA sequence

ATGACGCAAATGTGGCTTCTGTGGTGGCCGAAGACCGTCTCCGCCGGCGGCAAAACTACCACATCCTCCGCCACCGCCGCGGTAACTGCGACTTCCCTCGCCAAAAAGGCGTCCCCCTCCTCTCACTGCAACTGCGTCGCCAAACTGTTGCGGAAACTGAAGAAACGAGGGCGAGTTTTATGCAGCACTAGTGGAGAGAGCAGCGCGTTCCAGTGCCGGTACGATCCGCTGAGCTACTCTCTCAACTTTGACACCAGCGGCTGCGGAAGCTTGTTAGACGAAGATTACTATCAGTTCTGCGCGTTCTCTTCCAGATTCGCGTCAAATCCAGGAAATGCTTCTCATTCTGTCCCTGATGTAACAGTCACTGCTTCGCGC

Coding sequence (CDS)

ATGACGCAAATGTGGCTTCTGTGGTGGCCGAAGACCGTCTCCGCCGGCGGCAAAACTACCACATCCTCCGCCACCGCCGCGGTAACTGCGACTTCCCTCGCCAAAAAGGCGTCCCCCTCCTCTCACTGCAACTGCGTCGCCAAACTGTTGCGGAAACTGAAGAAACGAGGGCGAGTTTTATGCAGCACTAGTGGAGAGAGCAGCGCGTTCCAGTGCCGGTACGATCCGCTGAGCTACTCTCTCAACTTTGACACCAGCGGCTGCGGAAGCTTGTTAGACGAAGATTACTATCAGTTCTGCGCGTTCTCTTCCAGATTCGCGTCAAATCCAGGAAATGCTTCTCATTCTGTCCCTGATGTAACAGTCACTGCTTCGCGC

Protein sequence

MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASPSSHCNCVAKLLRKLKKRGRVLCSTSGESSAFQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVPDVTVTASR

Homology

[Close]

BLAST of MC01g1654 vs. NCBI nr
Match: XP_022146664.1 (uncharacterized protein LOC111015812 [Momordica charantia])

HSP 1 Score: 249 bits (635), Expect = 4.13e-83
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASPSSHCNCVAKLLRKLKKRGRVL 60
           MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASPSSHCNCVAKLLRKLKKRGRVL
Sbjct: 1   MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASPSSHCNCVAKLLRKLKKRGRVL 60

Query: 61  CSTSGESSAFQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVPDV 120
           CSTSGESSAFQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVPDV
Sbjct: 61  CSTSGESSAFQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVPDV 120

Query: 121 TVTASR 126
           TVTASR
Sbjct: 121 TVTASR 126

[Close]

BLAST of MC01g1654 vs. NCBI nr
Match: KAG7026395.1 (hypothetical protein SDJN02_10395, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 197 bits (502), Expect = 7.89e-63
Identity = 106/127 (83.46%), Postives = 110/127 (86.61%), Query Frame = 0


Query: 1   MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASPSSHCNCVAKLLRKLKKRGRVL 60
           M QMWLLWWPK  SA  KT+TSSATAAVTATSLA K S SSHCN +AKLLRKLKKRGRVL
Sbjct: 1   MAQMWLLWWPKNSSAAAKTSTSSATAAVTATSLATKVS-SSHCNRIAKLLRKLKKRGRVL 60

Query: 61  CSTSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVPD 120
           CST+GESS+ FQCRYDPLSYSLNFDTSGCGSLLDE YYQFCAFSSRFASNPG  S   PD
Sbjct: 61  CSTTGESSSNFQCRYDPLSYSLNFDTSGCGSLLDEHYYQFCAFSSRFASNPGTVSRPAPD 120

Query: 121 VTVTASR 126
            TVTASR
Sbjct: 121 GTVTASR 126

[Close]

BLAST of MC01g1654 vs. NCBI nr
Match: XP_023518962.1 (uncharacterized protein LOC111782330 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 196 bits (498), Expect = 3.21e-62
Identity = 105/127 (82.68%), Postives = 109/127 (85.83%), Query Frame = 0


Query: 1   MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASPSSHCNCVAKLLRKLKKRGRVL 60
           M QMWLLWWPK  SA  KT+TSSAT AVTATSLA K S SSHCN +AKLLRKLKKRGRVL
Sbjct: 1   MAQMWLLWWPKNSSAAAKTSTSSATGAVTATSLATKVS-SSHCNRIAKLLRKLKKRGRVL 60

Query: 61  CSTSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVPD 120
           CST+GESS+ FQCRYDPLSYSLNFDTSGCGSLLDE YYQFCAFSSRFASNPG  S   PD
Sbjct: 61  CSTTGESSSNFQCRYDPLSYSLNFDTSGCGSLLDEHYYQFCAFSSRFASNPGTVSRPAPD 120

Query: 121 VTVTASR 126
            TVTASR
Sbjct: 121 GTVTASR 126

[Close]

BLAST of MC01g1654 vs. NCBI nr
Match: XP_022926526.1 (uncharacterized protein LOC111433647 [Cucurbita moschata])

HSP 1 Score: 196 bits (498), Expect = 3.21e-62
Identity = 105/127 (82.68%), Postives = 109/127 (85.83%), Query Frame = 0


Query: 1   MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASPSSHCNCVAKLLRKLKKRGRVL 60
           M QMWLLWWPK  SA  KT+TSSATAAVTATSLA K S SSHCN +AKLLRKLKKRGRVL
Sbjct: 1   MAQMWLLWWPKNSSAAAKTSTSSATAAVTATSLATKVS-SSHCNRIAKLLRKLKKRGRVL 60

Query: 61  CSTSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVPD 120
           CST+GESS+ FQCRYDPLSYSLNFDTSGCGSLLDE YYQFC FSSRFASNPG  S   PD
Sbjct: 61  CSTTGESSSNFQCRYDPLSYSLNFDTSGCGSLLDEHYYQFCTFSSRFASNPGTVSRPAPD 120

Query: 121 VTVTASR 126
            TVTASR
Sbjct: 121 GTVTASR 126

[Close]

BLAST of MC01g1654 vs. NCBI nr
Match: KAG6594391.1 (hypothetical protein SDJN03_10944, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 194 bits (493), Expect = 1.69e-61
Identity = 104/124 (83.87%), Postives = 108/124 (87.10%), Query Frame = 0


Query: 4   MWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASPSSHCNCVAKLLRKLKKRGRVLCST 63
           MWLLWWPK  SA  KT+TSSATAAVTATSLA K S SSHCN +AKLLRKLKKRGRVLCST
Sbjct: 1   MWLLWWPKNSSAAAKTSTSSATAAVTATSLATKVS-SSHCNRIAKLLRKLKKRGRVLCST 60

Query: 64  SGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVPDVTV 123
           +GESS+ FQCRYDPLSYSLNFDTSGCGSLLDE YYQFCAFSSRFASNPG  S   PD TV
Sbjct: 61  TGESSSNFQCRYDPLSYSLNFDTSGCGSLLDEHYYQFCAFSSRFASNPGTVSRPAPDGTV 120

Query: 124 TASR 126
           TASR
Sbjct: 121 TASR 123

[Close]

BLAST of MC01g1654 vs. ExPASy TrEMBL
Match: A0A6J1CYQ9 (uncharacterized protein LOC111015812 OS=Momordica charantia OX=3673 GN=LOC111015812 PE=4 SV=1)

HSP 1 Score: 249 bits (635), Expect = 2.00e-83
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASPSSHCNCVAKLLRKLKKRGRVL 60
           MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASPSSHCNCVAKLLRKLKKRGRVL
Sbjct: 1   MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASPSSHCNCVAKLLRKLKKRGRVL 60

Query: 61  CSTSGESSAFQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVPDV 120
           CSTSGESSAFQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVPDV
Sbjct: 61  CSTSGESSAFQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVPDV 120

Query: 121 TVTASR 126
           TVTASR
Sbjct: 121 TVTASR 126

[Close]

BLAST of MC01g1654 vs. ExPASy TrEMBL
Match: A0A6J1EF60 (uncharacterized protein LOC111433647 OS=Cucurbita moschata OX=3662 GN=LOC111433647 PE=4 SV=1)

HSP 1 Score: 196 bits (498), Expect = 1.56e-62
Identity = 105/127 (82.68%), Postives = 109/127 (85.83%), Query Frame = 0


Query: 1   MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASPSSHCNCVAKLLRKLKKRGRVL 60
           M QMWLLWWPK  SA  KT+TSSATAAVTATSLA K S SSHCN +AKLLRKLKKRGRVL
Sbjct: 1   MAQMWLLWWPKNSSAAAKTSTSSATAAVTATSLATKVS-SSHCNRIAKLLRKLKKRGRVL 60

Query: 61  CSTSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVPD 120
           CST+GESS+ FQCRYDPLSYSLNFDTSGCGSLLDE YYQFC FSSRFASNPG  S   PD
Sbjct: 61  CSTTGESSSNFQCRYDPLSYSLNFDTSGCGSLLDEHYYQFCTFSSRFASNPGTVSRPAPD 120

Query: 121 VTVTASR 126
            TVTASR
Sbjct: 121 GTVTASR 126

[Close]

BLAST of MC01g1654 vs. ExPASy TrEMBL
Match: A0A6J1KS95 (uncharacterized protein LOC111497167 OS=Cucurbita maxima OX=3661 GN=LOC111497167 PE=4 SV=1)

HSP 1 Score: 191 bits (486), Expect = 1.05e-60
Identity = 102/127 (80.31%), Postives = 108/127 (85.04%), Query Frame = 0


Query: 1   MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASPSSHCNCVAKLLRKLKKRGRVL 60
           M QMWLLWWPK  SA  K++T SAT AV+ATSLA K S SSHCN +AKLLRKLKKRGRVL
Sbjct: 1   MAQMWLLWWPKNSSAAAKSSTPSATGAVSATSLASKVS-SSHCNRIAKLLRKLKKRGRVL 60

Query: 61  CSTSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVPD 120
           CST+GESS+ FQCRYDPLSYSLNFDTSGCGSLLDE YYQFCAFSSRFASNPG  S   PD
Sbjct: 61  CSTTGESSSNFQCRYDPLSYSLNFDTSGCGSLLDEHYYQFCAFSSRFASNPGTVSRPAPD 120

Query: 121 VTVTASR 126
            TVTASR
Sbjct: 121 GTVTASR 126

[Close]

BLAST of MC01g1654 vs. ExPASy TrEMBL
Match: A0A6J1EFV9 (uncharacterized protein LOC111433012 OS=Cucurbita moschata OX=3662 GN=LOC111433012 PE=4 SV=1)

HSP 1 Score: 178 bits (452), Expect = 1.40e-55
Identity = 100/125 (80.00%), Postives = 105/125 (84.00%), Query Frame = 0


Query: 4   MWLLWWPKT-VSAGGKTTTSSATAAVTATSLAKKASPSSHCNCVAKLLRKLKKRGRVLCS 63
           MWLLWWPK   SA  KT TSSA  AVTATSLA+KAS SS+CNC AKLLRKLKKR RVL S
Sbjct: 1   MWLLWWPKNNASADAKTCTSSA--AVTATSLARKAS-SSNCNCFAKLLRKLKKRSRVLRS 60

Query: 64  TSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVPDVT 123
           T+GESS+ FQCRYDPLSYSLNFDTSGCG LLDE YYQ+CAFSSRFASNPGN SHS P  T
Sbjct: 61  TAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAFSSRFASNPGNVSHSAPVAT 120

Query: 124 VTASR 126
           VT SR
Sbjct: 121 VTTSR 122

[Close]

BLAST of MC01g1654 vs. ExPASy TrEMBL
Match: A0A6J1IQV7 (uncharacterized protein LOC111477613 OS=Cucurbita maxima OX=3661 GN=LOC111477613 PE=4 SV=1)

HSP 1 Score: 177 bits (449), Expect = 4.01e-55
Identity = 99/125 (79.20%), Postives = 106/125 (84.80%), Query Frame = 0


Query: 4   MWLLWWPKT-VSAGGKTTTSSATAAVTATSLAKKASPSSHCNCVAKLLRKLKKRGRVLCS 63
           MWLLWWPK   S+G KT TSSA  AVTATSLA+KAS S++ NC AKLLRKLKKR RVL S
Sbjct: 1   MWLLWWPKNNASSGAKTCTSSA--AVTATSLARKASSSNY-NCFAKLLRKLKKRSRVLRS 60

Query: 64  TSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVPDVT 123
           T+GESS+ FQCRYDPLSYSLNFDTSGCG LLDE YYQ+CAFSSRFASNPGN SHS P VT
Sbjct: 61  TAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAFSSRFASNPGNVSHSAPVVT 120

Query: 124 VTASR 126
           VT SR
Sbjct: 121 VTTSR 122

[Close]

BLAST of MC01g1654 vs. TAIR 10
Match: AT4G19980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel; EXPRESSED DURING: 4 anthesis; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 86.3 bits (212), Expect = 2.0e-17
Identity = 53/108 (49.07%), Postives = 70/108 (64.81%), Query Frame = 0


Query: 16  GGKTTTSSATAAVTATSLAKKASPSSHCNCVAKLLRKLKKRGRVLCSTS---GESSAFQC 75
           GGK TT++   AVT  S     +P+    C+A+L+RKLKK+GR+L +TS    + S+ QC
Sbjct: 9   GGKATTAT---AVTKKSNVPTPTPNCCVTCLARLIRKLKKKGRLLLATSTARRQGSSLQC 68

Query: 76  RYDPLSYSLNFDTSGCGSLL-DEDYY-QFCAFSSRFASNPGNASHSVP 119
           RYDP+SYSLNFD   CG+L  DEDYY +F AFSSR+ +   N     P
Sbjct: 69  RYDPMSYSLNFDGGACGTLPDDEDYYLRFYAFSSRYVTTTNNIRKRPP 113

The following BLAST results are available for this feature:

BLAST of MC01g1654 vs.


Match Name	E-value	Identity	Description

BLAST of MC01g1654 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146664.1	4.13e-83	100.00	uncharacterized protein LOC111015812 [Momordica charantia]	[more]
KAG7026395.1	7.89e-63	83.46	hypothetical protein SDJN02_10395, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023518962.1	3.21e-62	82.68	uncharacterized protein LOC111782330 [Cucurbita pepo subsp. pepo]	[more]
XP_022926526.1	3.21e-62	82.68	uncharacterized protein LOC111433647 [Cucurbita moschata]	[more]
KAG6594391.1	1.69e-61	83.87	hypothetical protein SDJN03_10944, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MC01g1654 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CYQ9	2.00e-83	100.00	uncharacterized protein LOC111015812 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1EF60	1.56e-62	82.68	uncharacterized protein LOC111433647 OS=Cucurbita moschata OX=3662 GN=LOC1114336...	[more]
A0A6J1KS95	1.05e-60	80.31	uncharacterized protein LOC111497167 OS=Cucurbita maxima OX=3661 GN=LOC111497167...	[more]
A0A6J1EFV9	1.40e-55	80.00	uncharacterized protein LOC111433012 OS=Cucurbita moschata OX=3662 GN=LOC1114330...	[more]
A0A6J1IQV7	4.01e-55	79.20	uncharacterized protein LOC111477613 OS=Cucurbita maxima OX=3661 GN=LOC111477613...	[more]

BLAST of MC01g1654 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G19980.1	2.0e-17	49.07	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33168:SF42	EXPRESSED PROTEIN	coord: 1..110
None	No IPR available	PANTHER	PTHR33168	STRESS INDUCED PROTEIN-RELATED	coord: 1..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g1654.1	MC01g1654.1	mRNA