MC01g1490 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC01g1490
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPrecursor of CEP14
LocationMC01: 19297775 .. 19297996 (+)
RNA-Seq ExpressionMC01g1490
SyntenyMC01g1490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCGTTTTCTAATCCTCACTTGGGCTCTCATTTTCCTCCTCATATTCGCATCTTCTGCCGCCAGAACGACGCCGTGCAGCAGCCTGTTTCTGGCCTCTCTCCCGAAGGGCCCGGTGCCGGCTTCTACTCCCAGCAACAGAGGCCATGCCGCCGCCGTCGACCAGAAGCTCAGTGGCCGACACCTTATACAGTCCGTCCCAAGCCCCGGCGTCGGCCAT

mRNA sequence

ATGGCTCGTTTTCTAATCCTCACTTGGGCTCTCATTTTCCTCCTCATATTCGCATCTTCTGCCGCCAGAACGACGCCGTGCAGCAGCCTGTTTCTGGCCTCTCTCCCGAAGGGCCCGGTGCCGGCTTCTACTCCCAGCAACAGAGGCCATGCCGCCGCCGTCGACCAGAAGCTCAGTGGCCGACACCTTATACAGTCCGTCCCAAGCCCCGGCGTCGGCCAT

Coding sequence (CDS)

ATGGCTCGTTTTCTAATCCTCACTTGGGCTCTCATTTTCCTCCTCATATTCGCATCTTCTGCCGCCAGAACGACGCCGTGCAGCAGCCTGTTTCTGGCCTCTCTCCCGAAGGGCCCGGTGCCGGCTTCTACTCCCAGCAACAGAGGCCATGCCGCCGCCGTCGACCAGAAGCTCAGTGGCCGACACCTTATACAGTCCGTCCCAAGCCCCGGCGTCGGCCAT

Protein sequence

MARFLILTWALIFLLIFASSAARTTPCSSLFLASLPKGPVPASTPSNRGHAAAVDQKLSGRHLIQSVPSPGVGH
Homology
BLAST of MC01g1490 vs. ExPASy Swiss-Prot
Match: Q52K95 (Precursor of CEP14 OS=Arabidopsis thaliana OX=3702 GN=CEP14 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 3.1e-07
Identity = 28/49 (57.14%), Postives = 34/49 (69.39%), Query Frame = 0

Query: 32  LASLPKGPVPASTPSNRGHAAAVDQKLSGRHL------IQSVPSPGVGH 75
           L++LPKG +P STPS +GHAA    KL  RHL      ++SVPSPGVGH
Sbjct: 59  LSALPKGKIPNSTPSKKGHAAVFAGKLRSRHLSTVDRYLRSVPSPGVGH 107

BLAST of MC01g1490 vs. NCBI nr
Match: KAG7034658.1 (Precursor of CEP14, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 93.2 bits (230), Expect = 6.65e-23
Identity = 49/79 (62.03%), Postives = 59/79 (74.68%), Query Frame = 0

Query: 1  MARFLILTWALIFLLIFASSA-----ARTTPCSSLFLASLPKGPVPASTPSNRGHAAAVD 60
          MA F ++TW LI  L+FASSA     AR     SLFLA+LPKG VP+STPS +GHA  +D
Sbjct: 1  MACFKLITWPLILTLLFASSAPTSHAARLLRTDSLFLAALPKGTVPSSTPSKKGHAMVLD 60

Query: 61 QKLSGRHLIQSVPSPGVGH 74
          QKL+ RHL+QSVPSPG+GH
Sbjct: 61 QKLTARHLVQSVPSPGIGH 79

BLAST of MC01g1490 vs. NCBI nr
Match: KAG7026512.1 (Precursor of CEP14, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 83.6 bits (205), Expect = 4.90e-19
Identity = 46/82 (56.10%), Postives = 59/82 (71.95%), Query Frame = 0

Query: 2  ARFLILTWALIFLLIFASSA-----ARTTPCS----SLFLASLPKGPVPASTPSNRGHAA 61
          ARF ++T  L+ LL+FASSA     AR  P +    SLFLA+LPKG VP+S PS + HA 
Sbjct: 3  ARFTLITCPLLLLLLFASSALTSHAARLLPTTPSPHSLFLAALPKGTVPSSAPSKKAHAL 62

Query: 62 AVDQKLSGRHLIQSVPSPGVGH 74
           +DQKL+ RHL++SVPSPG+GH
Sbjct: 63 LLDQKLTARHLVESVPSPGIGH 84

BLAST of MC01g1490 vs. NCBI nr
Match: GFQ06984.1 (hypothetical protein PHJA_002842500 [Phtheirospermum japonicum])

HSP 1 Score: 71.6 bits (174), Expect = 3.58e-14
Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = 0

Query: 25 TPCSSLFLASLPKGPVPASTPSNRGHAAAVDQKLSGRHL------IQSVPSPGVGH 74
          +P  SL++A+LPKG VPASTPS +GHAA  DQKL  RHL      ++SVPSPGVGH
Sbjct: 42 SPADSLYMAALPKGTVPASTPSKKGHAATTDQKLIARHLAAIDRILRSVPSPGVGH 97

BLAST of MC01g1490 vs. NCBI nr
Match: XP_027348625.1 (precursor of CEP14 [Abrus precatorius])

HSP 1 Score: 70.5 bits (171), Expect = 1.02e-13
Identity = 42/92 (45.65%), Postives = 55/92 (59.78%), Query Frame = 0

Query: 8  TWALIFLLIFASSAA----------------RTTPCS--SLFLASLPKGPVPASTPSNRG 67
          TW L+F+L+FAS ++                +  P S  SLFL++LPKG VP S+PS +G
Sbjct: 6  TWVLLFILLFASLSSSLEGRKLLLGAEKQWKKANPSSRDSLFLSALPKGTVPPSSPSKKG 65

Query: 68 HAAAVDQKLSGRHLI-------QSVPSPGVGH 74
          H   VD+KL+ RHLI       +SVPSPGVGH
Sbjct: 66 HVVEVDEKLTARHLISIDRVLLRSVPSPGVGH 97

BLAST of MC01g1490 vs. NCBI nr
Match: XP_019418621.1 (PREDICTED: uncharacterized protein LOC109329412 [Lupinus angustifolius] >OIV95254.1 hypothetical protein TanjilG_21644 [Lupinus angustifolius])

HSP 1 Score: 69.3 bits (168), Expect = 3.30e-13
Identity = 43/100 (43.00%), Postives = 59/100 (59.00%), Query Frame = 0

Query: 1  MARFLILTWALIFLLIFASSAA-------------------RTTPCSSLFLASLPKGPVP 60
          MARF+  T+ ++FL++FAS  +                   +++P +SL+ +SLPKG VP
Sbjct: 1  MARFV--TFLVLFLVLFASFCSCLQGRKLDLGHAKKHKNNVKSSPSNSLYFSSLPKGTVP 60

Query: 61 ASTPSNRGHAAAVDQKLSGRHLIQ-------SVPSPGVGH 74
          +STPS +GHA  VD+KL  RHLI        SVPSPG GH
Sbjct: 61 SSTPSKKGHATEVDEKLIARHLISTETLLLGSVPSPGAGH 98

BLAST of MC01g1490 vs. ExPASy TrEMBL
Match: A0A0A0KKF2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519990 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 7.31e-14
Identity = 40/85 (47.06%), Postives = 54/85 (63.53%), Query Frame = 0

Query: 1  MARFLILTWALIFLLIFASSA-----ARTTPCSS------LFLASLPKGPVPASTPSNRG 60
          M RF  +T++LI  L+FA SA     AR  P ++      LFL +LPKG +P S+PS + 
Sbjct: 1  MPRFTFITFSLILALLFAFSAPTSLAARLLPTNTMPSPNTLFLTALPKGTIPTSSPSKKV 60

Query: 61 HAAAVDQKLSGRHLIQSVPSPGVGH 74
          H+  +   L+ RHL+QSVPSPGVGH
Sbjct: 61 HSMLLHHNLTARHLVQSVPSPGVGH 85

BLAST of MC01g1490 vs. ExPASy TrEMBL
Match: A0A4P1QUL9 (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_21644 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.60e-13
Identity = 43/100 (43.00%), Postives = 59/100 (59.00%), Query Frame = 0

Query: 1  MARFLILTWALIFLLIFASSAA-------------------RTTPCSSLFLASLPKGPVP 60
          MARF+  T+ ++FL++FAS  +                   +++P +SL+ +SLPKG VP
Sbjct: 1  MARFV--TFLVLFLVLFASFCSCLQGRKLDLGHAKKHKNNVKSSPSNSLYFSSLPKGTVP 60

Query: 61 ASTPSNRGHAAAVDQKLSGRHLIQ-------SVPSPGVGH 74
          +STPS +GHA  VD+KL  RHLI        SVPSPG GH
Sbjct: 61 SSTPSKKGHATEVDEKLIARHLISTETLLLGSVPSPGAGH 98

BLAST of MC01g1490 vs. ExPASy TrEMBL
Match: A0A6A1UKC8 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G007236 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.90e-13
Identity = 34/53 (64.15%), Postives = 42/53 (79.25%), Query Frame = 0

Query: 28 SSLFLASLPKGPVPASTPSNRGHAAAVDQKLSGRHLI------QSVPSPGVGH 74
          +SLFL++LPKG VP+STPS +GHAA VD+KL  RHLI      +SVPSPG+GH
Sbjct: 43 ASLFLSTLPKGNVPSSTPSKKGHAAVVDEKLIARHLISIDRILRSVPSPGIGH 95

BLAST of MC01g1490 vs. ExPASy TrEMBL
Match: I3S128 (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 4.02e-13
Identity = 33/56 (58.93%), Postives = 41/56 (73.21%), Query Frame = 0

Query: 24 TTPCSSLFLASLPKGPVPASTPSNRGHAAAVDQKLSGRHL-----IQSVPSPGVGH 74
          ++ C SLFL+SLPKG VP STPS +GH+  VD+KL  RHL     ++SVPSPG GH
Sbjct: 42 SSSCRSLFLSSLPKGNVPTSTPSKKGHSVEVDEKLIARHLTERLLLRSVPSPGAGH 97

BLAST of MC01g1490 vs. ExPASy TrEMBL
Match: A0A7N2LQP2 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.06e-12
Identity = 34/52 (65.38%), Postives = 39/52 (75.00%), Query Frame = 0

Query: 29 SLFLASLPKGPVPASTPSNRGHAAAVDQKLSGRHLIQ------SVPSPGVGH 74
          SLFL++LPKG VP+STPS +GHA  VD+KL  RHLI       SVPSPGVGH
Sbjct: 43 SLFLSALPKGTVPSSTPSKKGHAVEVDEKLIARHLISIDRILGSVPSPGVGH 94

BLAST of MC01g1490 vs. TAIR 10
Match: AT1G29290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 18 Blast hits to 18 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 2.2e-08
Identity = 28/49 (57.14%), Postives = 34/49 (69.39%), Query Frame = 0

Query: 32  LASLPKGPVPASTPSNRGHAAAVDQKLSGRHL------IQSVPSPGVGH 75
           L++LPKG +P STPS +GHAA    KL  RHL      ++SVPSPGVGH
Sbjct: 59  LSALPKGKIPNSTPSKKGHAAVFAGKLRSRHLSTVDRYLRSVPSPGVGH 107

BLAST of MC01g1490 vs. TAIR 10
Match: AT1G16950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis; Has 17 Blast hits to 17 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 3.2e-04
Identity = 32/84 (38.10%), Postives = 44/84 (52.38%), Query Frame = 0

Query: 5  LILTWALIFLLIFASSAARTT-----PCSSLFLASLPKGPVPASTPSNRGHAAA---VDQ 64
          +I    LI   +  SS AR           LFL++LPKG VP S PS++GH +     DQ
Sbjct: 10 MICLLILIVGFVLQSSQARKVLVPYGTSKGLFLSALPKGNVPPSGPSDKGHTSPPDDTDQ 69

Query: 65 KLSGRH------LIQSVPSPGVGH 75
          ++   +       ++SVPSPGVGH
Sbjct: 70 RMVPENSPEIYRRLESVPSPGVGH 93

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q52K953.1e-0757.14Precursor of CEP14 OS=Arabidopsis thaliana OX=3702 GN=CEP14 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
KAG7034658.16.65e-2362.03Precursor of CEP14, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG7026512.14.90e-1956.10Precursor of CEP14, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
GFQ06984.13.58e-1462.50hypothetical protein PHJA_002842500 [Phtheirospermum japonicum][more]
XP_027348625.11.02e-1345.65precursor of CEP14 [Abrus precatorius][more]
XP_019418621.13.30e-1343.00PREDICTED: uncharacterized protein LOC109329412 [Lupinus angustifolius] >OIV9525... [more]
Match NameE-valueIdentityDescription
A0A0A0KKF27.31e-1447.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519990 PE=4 SV=1[more]
A0A4P1QUL91.60e-1343.00Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_21644 PE=4 S... [more]
A0A6A1UKC81.90e-1364.15Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G007236 PE=4 SV=1[more]
I3S1284.02e-1358.93Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1[more]
A0A7N2LQP21.06e-1265.38Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G29290.12.2e-0857.14unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G16950.13.2e-0438.10unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC01g1490.1MC01g1490.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006995 cellular response to nitrogen starvation
biological_process GO:0006970 response to osmotic stress