MC01g0074 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC01g0074
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionCell wall-associated hydrolase
LocationMC01: 4519809 .. 4519892 (+)
RNA-Seq ExpressionMC01g0074
SyntenyMC01g0074
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCCAAGTGCCGAAGAGCCGACATCGAGGTGCCAAACCTTCCTGTCGATGTGAGCTCATGGGGAAGATCAGCCTGTTATCCCTC

mRNA sequence

CCCCAAGTGCCGAAGAGCCGACATCGAGGTGCCAAACCTTCCTGTCGATGTGAGCTCATGGGGAAGATCAGCCTGTTATCCCTC

Coding sequence (CDS)

CCCCAAGTGCCGAAGAGCCGACATCGAGGTGCCAAACCTTCCTGTCGATGTGAGCTCATGGGGAAGATCAGCCTGTTATCCCTC

Protein sequence

PQVPKSRHRGAKPSCRCELMGKISLLSL
Homology
[Close]
BLAST of MC01g0074 vs. NCBI nr
Match: KAG6540643.1 (hypothetical protein Mapa_017975 [Marchantia paleacea])

HSP 1 Score: 53.5 bits (127), Expect = 2.78e-08
Identity = 25/28 (89.29%), Postives = 26/28 (92.86%), Query Frame = 0 

Query: 1  PQVPKSRHRGAKPSCRCELMGKISLLSL 28
          PQV KSRHRGAKPS RCEL+GKISLLSL
Sbjct: 30 PQVAKSRHRGAKPSRRCELLGKISLLSL 57

[Close]
BLAST of MC01g0074 vs. NCBI nr
Match: QHO21812.1 (Cell wall-associated hydrolase [Arachis hypogaea])

HSP 1 Score: 53.5 bits (127), Expect = 2.78e-08
Identity = 25/28 (89.29%), Postives = 26/28 (92.86%), Query Frame = 0 

Query: 1  PQVPKSRHRGAKPSCRCELMGKISLLSL 28
          PQV KSRHRGAKPS RCEL+GKISLLSL
Sbjct: 30 PQVAKSRHRGAKPSRRCELLGKISLLSL 57

[Close]
BLAST of MC01g0074 vs. NCBI nr
Match: YP_001152219.1 (ORF58f [Pinus koraiensis] >ABP35460.1 ORF58f [Pinus koraiensis])

HSP 1 Score: 53.5 bits (127), Expect = 2.78e-08
Identity = 25/28 (89.29%), Postives = 26/28 (92.86%), Query Frame = 0 

Query: 1  PQVPKSRHRGAKPSCRCELMGKISLLSL 28
          PQV KSRHRGAKPS RCEL+GKISLLSL
Sbjct: 30 PQVAKSRHRGAKPSRRCELLGKISLLSL 57

[Close]
BLAST of MC01g0074 vs. NCBI nr
Match: QHN92996.1 (uncharacterized protein DS421_17g588840 [Arachis hypogaea])

HSP 1 Score: 53.5 bits (127), Expect = 8.18e-08
Identity = 25/28 (89.29%), Postives = 26/28 (92.86%), Query Frame = 0 

Query: 1   PQVPKSRHRGAKPSCRCELMGKISLLSL 28
           PQV KSRHRGAKPS RCEL+GKISLLSL
Sbjct: 77  PQVAKSRHRGAKPSRRCELLGKISLLSL 104

[Close]
BLAST of MC01g0074 vs. NCBI nr
Match: KAF3449752.1 (hypothetical protein FNV43_RR05830 [Rhamnella rubrinervis])

HSP 1 Score: 53.5 bits (127), Expect = 8.18e-08
Identity = 25/28 (89.29%), Postives = 26/28 (92.86%), Query Frame = 0 

Query: 1   PQVPKSRHRGAKPSCRCELMGKISLLSL 28
           PQV KSRHRGAKPS RCEL+GKISLLSL
Sbjct: 77  PQVAKSRHRGAKPSRRCELLGKISLLSL 104

[Close]
BLAST of MC01g0074 vs. ExPASy TrEMBL
Match: A0A2I0W8Y0 (Uncharacterized protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca006705 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.96e-08
Identity = 25/28 (89.29%), Postives = 26/28 (92.86%), Query Frame = 0 

Query: 1   PQVPKSRHRGAKPSCRCELMGKISLLSL 28
           PQV KSRHRGAKPS RCEL+GKISLLSL
Sbjct: 77  PQVAKSRHRGAKPSRRCELLGKISLLSL 104

[Close]
BLAST of MC01g0074 vs. ExPASy TrEMBL
Match: A0A2U1NFY8 (Cell wall-associated hydrolase OS=Artemisia annua OX=35608 GN=CTI12_AA270580 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 5.31e-08
Identity = 25/28 (89.29%), Postives = 26/28 (92.86%), Query Frame = 0 

Query: 1   PQVPKSRHRGAKPSCRCELMGKISLLSL 28
           PQV KSRHRGAKPS RCEL+GKISLLSL
Sbjct: 91  PQVAKSRHRGAKPSRRCELLGKISLLSL 118

[Close]
BLAST of MC01g0074 vs. ExPASy TrEMBL
Match: A0A4S4EDU9 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_017304 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.05e-07
Identity = 25/28 (89.29%), Postives = 26/28 (92.86%), Query Frame = 0 

Query: 1  PQVPKSRHRGAKPSCRCELMGKISLLSL 28
          PQV KSRHRGAKPS RCEL+GKISLLSL
Sbjct: 30 PQVAKSRHRGAKPSRRCELLGKISLLSL 57

[Close]
BLAST of MC01g0074 vs. ExPASy TrEMBL
Match: A0A5N6N5S8 (Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_25331 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.25e-07
Identity = 25/28 (89.29%), Postives = 26/28 (92.86%), Query Frame = 0 

Query: 1   PQVPKSRHRGAKPSCRCELMGKISLLSL 28
           PQV KSRHRGAKPS RCEL+GKISLLSL
Sbjct: 239 PQVAKSRHRGAKPSRRCELLGKISLLSL 266

[Close]
BLAST of MC01g0074 vs. ExPASy TrEMBL
Match: T2DPD7 (Cell wall-associated hydrolase OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.26e-07
Identity = 25/28 (89.29%), Postives = 26/28 (92.86%), Query Frame = 0 

Query: 1   PQVPKSRHRGAKPSCRCELMGKISLLSL 28
           PQV KSRHRGAKPS RCEL+GKISLLSL
Sbjct: 101 PQVAKSRHRGAKPSRRCELLGKISLLSL 128

The following BLAST results are available for this feature:
BLAST of MC01g0074 vs.
Match NameE-valueIdentityDescription
BLAST of MC01g0074 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6540643.12.78e-0889.29hypothetical protein Mapa_017975 [Marchantia paleacea][more]
QHO21812.12.78e-0889.29Cell wall-associated hydrolase [Arachis hypogaea][more]
YP_001152219.12.78e-0889.29ORF58f [Pinus koraiensis] >ABP35460.1 ORF58f [Pinus koraiensis][more]
QHN92996.18.18e-0889.29uncharacterized protein DS421_17g588840 [Arachis hypogaea][more]
KAF3449752.18.18e-0889.29hypothetical protein FNV43_RR05830 [Rhamnella rubrinervis][more]
BLAST of MC01g0074 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2I0W8Y03.96e-0889.29Uncharacterized protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca006705 PE=4... [more]
A0A2U1NFY85.31e-0889.29Cell wall-associated hydrolase OS=Artemisia annua OX=35608 GN=CTI12_AA270580 PE=... [more]
A0A4S4EDU93.05e-0789.29Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_0173... [more]
A0A5N6N5S83.25e-0789.29Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_25331 PE=4 SV=1[more]
T2DPD73.26e-0789.29Cell wall-associated hydrolase OS=Phaseolus vulgaris OX=3885 PE=2 SV=1[more]
BLAST of MC01g0074 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC01g0074.1MC01g0074.1mRNA