MC00g_new0679 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC00g_new0679
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	7-deoxyloganetic acid glucosyltransferase-like
Location	scaffold31: 504547 .. 508879 (+)
RNA-Seq Expression	MC00g_new0679
Synteny	MC00g_new0679

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACACCAAAAATGGGAGTGGCGGTAGCAGTAGCGGTAGCGGTAGCGAGCGTCAAGTTTATAACTCTACGAGCGATTGTAGCAACTTCGAGAAGCCAATGGTGGCTCCAGGAAGTAGAGGACGTACTCATATCAATCGAGATGAATTTGAGAAAGATCCTCCACGTTATTTTCGCAATCTTCATGCAACTCAAAAGAATGAGAATAAGAAGTAGCCATTGATTATTAGAAAAATTGGCTTATGGAAATTATGTAGAAGTCTATATTATGATAAATAAGAATGTTGGTTTGGTTAATTATCTATATTCTTAGCTTTTTACATATATGTTTATCTTTTATTGGTCATTTTTTTTAATCTAAATCTAAATTTGGTTTATGAAATTTGATACCAAATTTAGTATGTACCCATGTATTTTTAGATATTTATTCAGGTAGATATATTTGATGATTGAATATCTATGTTAGTTTTCTGTTCAAATAAGATTTTCAAAATTAATGGTAATTAATAAACTGGTTTTTATGTAAAATTTAAGGATTAAAAAAATATATATGAAAAATTAAAAGGATTTACATTTTTTTATTTTTATAAAAATGTTTGGAAATATGAACGTGTTGAAAATTTGTCAATAAAAGATGCTAGACAAAAATAAAGGTTTTTTTTTTTATTTTTTAATTTAAACACAAAGTAAAATCTTTACTTTAATGTTCAACAGCATTTATGAGAAATTTTTTAAATTTTTTTTTGTAATAATGCTCAAGTAGAAATTTATTTGTTCTTTCTAAAAAAAATATTTGTAAAATACATTTCCTCTTGAAATTTATTTCGAGAATGATGCTTGAAAAATGGAAGAAATGAATTAGGCTATTTTTCATTTGCATGGCGCTTGCCGCCATGTTTTTTTTTTTTTTTTGTATGGATAAAGAATTTGAAGTTTTGTATTATTAATTTATATTCAAGAAAATGCAAAAACAACTATAATACAAGGTAAACTGATTAAGCTTGTAAATTATATTTTGCTAATTACGTACAAGATAAAACTATAGAAATAAAATAAAAAGTTTATGACAATCAATTAATAAAATTTTGACAAATTGAAAATATTGTGCCTTTCGATTTTTTAAAATGAAAAACAAAATTTTAAAAGTATAAGATTTAATTATTTAAAATTTTTATAAATATTGTTTTAAAAAATAAAGCCTGTCTTTTAGATAATCGAAAAATAATTACCTACAAAGTTAAATATACAAATAACTACGTATATTATCATTTTGAAAAAAACAATAAAAATAATTTTTAATTGCTGATTTAATTATTTTTAAATTTAATATTTGTTTAAAAAAATAAAATTATCTTTTAGATGATTTTTTTAGCACAACACCCTTTGGATGATTGGAGTTATATATATATATATACATCTATGGAAGAAATAAACAAATAAATATAGATTTGATAATTAGTACATACCTTTAATTAGGGTTCAAAATGTCGAGAGACATGTCGCTCGATATGTCAACATGCTCGACATGGATATAGGGGGAAAAGTCGATTTTCCCTCCATGTCGTCGACACGTCGACATGTCTCTTTTTTTTTTCCTCTTCTTCTTTTAACATTATTTTATTTTCATTATCTTCCTACTATGCCAAGACTCACAACCTCGATAATTGTAATCTTAGTATGTTCAATAAAACATTAGCATTTTAATACTGTATAAAGTATAATTAATAAGATTTGGAATTTGCTTTATTGATAATTTTTAATTCAACCTAATCCTTAGTTACATAATTGAACAATATATGTAAAATATTGACATATATAAAGATTGAAATAATCTTAGAATTTTTAAAAAATAAAATATTATTATATACAAATAGTGGTGAAACATAAAGTAGAATATGTAACTTAATTAATACCAAAAAGATGATCTCGAAGGATCTAGTGCGCTATCTTGATAACTTTGATATAAATTACAATAGTTCTCCCAAGTCATCCTACACTGAAAGTTTTGAAGGTAGTTGCTCAAATGAGTAGAATACATGAAGCACATATGGATCTCATTGGTAGATAATTTGGATGAATGACACAATCACGATGTTGAGGTGTTTGGAAATTGTGTAAATTTGATTGGAAAGTTTGGATTGACGATTGATTTGAAAATGTGTTTGAAAAATGTGTAAATTCAAATTTGAGAAGAGAAGTAGGTAAAAAGTAAACAGGTATGAGTTAATTAAAATTTAGAAATGTGTTTGGAAACCAAGTCAGTAATTATCTCATTTCCAAATGAATCCTATTTTTTCGAATAATTTTCATCAATCTTCATTAAAAGAAAAAATATTTTTTCGATATTTCCATCAACATCGACATTTTCAGAAGTAAAATAGTCATTTTCTGACATTTAATAGTTAAAAGAATTATAGACTAATTAAGCTACCATTTAAGTTTTATTTGCTAATTCAAAAAATTTCCATCAATTTCCACATTTTTTCCTGAAATATCCATCGATATTGACATGTCCATCGACATGTCCGTAAAATCAGGACCTCAACATTTTCATCGACATCGACATTTTGAACACTGTTCAATAAACATTGAAATCGTTTTTTAATATGTAAACCCAGATAATTACCGGTTTTTTTGGCCCTTTTTTTGTATAAAATTAAAAATGAAATAGATAAATTAATACTTTTTTTTCTCAGAGGAAAATTAAATTAATCATTTTACATAAAGAAACTATATAGTCAGAGAATTATTAAAATACTAATTAATGAATTTTATTTCTTCTTTTTTTTTTTAGTTCAATGCATGCATGCATTTAAAATTTGGAAAATTCCAAGAAAATTTAGATTTCCCGGAACCAAGATGAAGTCGTAATTAAAAATGTTCAATTTTCAACACATCTTAAAGAAGTATAGAAGTAAATAATACATTTACGTTTACCAATAAGCTATTTTTGGGTTGAGAAAAATCATTCCCATTCTAAATTTTAATGATATTTGAAGTATTGCACTCTAAATTTTAACGATATATCAAATAGATGTAAGATCATTCTCTCCTCTACTTTTCGATTGAATTTGATGTTGGAGAAATATGCATAGAAAATTTAAGGAAACACAAAATTAAAAATCCGAACCCAACGTAGCGATGTTTCTCCTTAAGACAATTTTGTTCCCTCTACGATCCTCAAGGTTTCATGAACAATTGTCTCCCAGAATAGGATGAATATACCAACCTGTGAATATAACACTTCACACATAGGACTCAACGATCACAGTATTTAAGTATTCGTACAGAGGAAAGGAGAGAATTTCGAAGGATCAGTTTTCCGTATTCTAAAACTGAGAAGAACCACGTATTTATAGACTATTTGTGGCAATTCAAATAGTCATATCTGAAATAAAGTTACGTCTTTCGATAAAAGGACATAATCTTTATAAAAGACGCACTAGTTCATACAAATTGTGATTCTTAATTTTTAACAAAAATAATTTTATTAAAAAATTACAACATTTGATGCATGCACCAACTTTTGATTTTTTTTAGGACAATGAATTCTATTATATATATACATCCATGCATGCATTAATTAGTCATTCTTTTAAGTAGTGAGCAAGTTCGCGGTGTTTGATGTGGTCTACTAAATATAGAGGGTGTATAGGTTTGATTAAGTTGAGTTTTGAGAGATTTTTCGAAGGAACCTGAAAATGCGAGTTGGTTGATTCTATTATCCAAAAGAATAAAGGAAATGTGCAACCCAACCCTTATATTTTCAAGTTGGGATGGCTAATAGTATAAATTTTCTTTAATATTTACAAACAAAACTTAATGACCAAATACGATGGAGATGTACGGCGGAGATGAGTGACGCTGCTACGATGGAGTCAATTGTTGAATCTGCTGCTTCTTCTCCACTGTTGAAGATAACTTGCTATGGAGTAGGGTACTAAAAGTCAATCGACACGTCAACATGTCAAAGGATCGACATCGACAAAGGGAGGGGAATCTCCCCTGTTGTCGGCATATTGACAAAATGTCGCTGGATACATGTTTTCTTTTCGTTTTTTTTTTTCTCTCGGCGATTCCTCCTCCCAGGCCCTCACCGGATTCTGGAAAGAGGACCAAACCTCATGTCCTCGCTTGACTCTCAGTCCCGCAGATTCGTGATTTTCTGAGGATGGAAGCCTACAAATTGGTGAAGTTCAGGCATGAGCTGGTGAACAGCGGCACAAGCTTCCTATGCGTGTTGAGATTCGACATTGTTAAAGATGGAGGAACGACGGAATTGATGGTGGTGGAGTGGGCAGCACAAAGTGGGTTTTTGATGCACCGCGGTTAA

mRNA sequence

ATGGACACCAAAAATGGGAGTGGCGGTAGCAGTAGCGGTAGCGGTAGCGAGCGTCAAGTTTATAACTCTACGAGCGATTGTAGCAACTTCGAGAAGCCAATGGTGGCTCCAGGAATCCCGCAGATTCGTGATTTTCTGAGGATGGAAGCCTACAAATTGGTGAAGTTCAGGCATGAGCTGGTGAACAGCGGCACAAGCTTCCTATGCGTGTTGAGATTCGACATTGTTAAAGATGGAGGAACGACGGAATTGATGGTGGTGGAGTGGGCAGCACAAAGTGGGTTTTTGATGCACCGCGGTTAA

Coding sequence (CDS)

ATGGACACCAAAAATGGGAGTGGCGGTAGCAGTAGCGGTAGCGGTAGCGAGCGTCAAGTTTATAACTCTACGAGCGATTGTAGCAACTTCGAGAAGCCAATGGTGGCTCCAGGAATCCCGCAGATTCGTGATTTTCTGAGGATGGAAGCCTACAAATTGGTGAAGTTCAGGCATGAGCTGGTGAACAGCGGCACAAGCTTCCTATGCGTGTTGAGATTCGACATTGTTAAAGATGGAGGAACGACGGAATTGATGGTGGTGGAGTGGGCAGCACAAAGTGGGTTTTTGATGCACCGCGGTTAA

Protein sequence

MDTKNGSGGSSSGSGSERQVYNSTSDCSNFEKPMVAPGIPQIRDFLRMEAYKLVKFRHELVNSGTSFLCVLRFDIVKDGGTTELMVVEWAAQSGFLMHRG

Homology

[Close]

BLAST of MC00g_new0679 vs. NCBI nr
Match: XP_022151474.1 (7-deoxyloganetic acid glucosyltransferase-like [Momordica charantia])

HSP 1 Score: 65.5 bits (158), Expect = 8.26e-10
Identity = 36/64 (56.25%), Postives = 41/64 (64.06%), Query Frame = 0


Query: 46  LRMEAYKLVKFRHELVNSGTSFLCVLRFDIVKDGGTTELM----------VVEWAAQSGF 99
           +RM A KLV+F H LVNSGT FLCVLR DIV+ GG  +L+          VVEWAAQ   
Sbjct: 295 MRMTADKLVEFWHGLVNSGTRFLCVLRSDIVEGGGAADLIKQVGETGNGIVVEWAAQEKV 354

[Close]

BLAST of MC00g_new0679 vs. ExPASy TrEMBL
Match: A0A6J1DD71 (7-deoxyloganetic acid glucosyltransferase-like OS=Momordica charantia OX=3673 GN=LOC111019406 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.00e-10
Identity = 36/64 (56.25%), Postives = 41/64 (64.06%), Query Frame = 0


Query: 46  LRMEAYKLVKFRHELVNSGTSFLCVLRFDIVKDGGTTELM----------VVEWAAQSGF 99
           +RM A KLV+F H LVNSGT FLCVLR DIV+ GG  +L+          VVEWAAQ   
Sbjct: 295 MRMTADKLVEFWHGLVNSGTRFLCVLRSDIVEGGGAADLIKQVGETGNGIVVEWAAQEKV 354

[Close]

BLAST of MC00g_new0679 vs. ExPASy TrEMBL
Match: A0A6J1DEZ9 (Glycosyltransferase OS=Momordica charantia OX=3673 GN=LOC111019460 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 4.93e-04
Identity = 27/61 (44.26%), Postives = 37/61 (60.66%), Query Frame = 0


Query: 46  LRMEAYKLVKFRHELVNSGTSFLCVLRFD-IVKDGGTTELM-------VVEWAAQSGFLM 98
           ++MEA+KL +F + LVNSG+ FL V R D ++  G   E+M       VVEWA+Q   L 
Sbjct: 290 MKMEAWKLAEFWYGLVNSGSPFLFVFRPDCVINSGDAAEVMEGRGRGMVVEWASQEKVLA 349

The following BLAST results are available for this feature:

BLAST of MC00g_new0679 vs.


Match Name	E-value	Identity	Description

BLAST of MC00g_new0679 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151474.1	8.26e-10	56.25	7-deoxyloganetic acid glucosyltransferase-like [Momordica charantia]	[more]

BLAST of MC00g_new0679 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DD71	4.00e-10	56.25	7-deoxyloganetic acid glucosyltransferase-like OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1DEZ9	4.93e-04	44.26	Glycosyltransferase OS=Momordica charantia OX=3673 GN=LOC111019460 PE=3 SV=1	[more]

BLAST of MC00g_new0679 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC00g_new0679.1	MC00g_new0679.1	mRNA