MC00g0202 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTTAACTACATGGGAATGCTAGCTGTGGAAGGGACATATGAAGAAATGGAGGCTCTTTTGAGCCAAGACATTCACCCAGTGTACAGTTTTCTGACAAACCAAAACTTGAAAGAACTATTGAGAGCTGGAGCTAATTCTGAT TTTAACTACATGGGAATGCTAGCTGTGGAAGGGACATATGAAGAAATGGAGGCTCTTTTGAGCCAAGACATTCACCCAGTGTACAGTTTTCTGACAAACCAAAACTTGAAAGAACTATTGAGAGCTGGAGCTAATTCTGAT TTTAACTACATGGGAATGCTAGCTGTGGAAGGGACATATGAAGAAATGGAGGCTCTTTTGAGCCAAGACATTCACCCAGTGTACAGTTTTCTGACAAACCAAAACTTGAAAGAACTATTGAGAGCTGGAGCTAATTCTGAT FNYMGMLAVEGTYEEMEALLSQDIHPVYSFLTNQNLKELLRAGANSD Homology
BLAST of MC00g0202 vs. ExPASy Swiss-Prot
Match: A2YLX7 (Protein LHCP TRANSLOCATION DEFECT OS=Oryza sativa subsp. indica OX=39946 GN=LTD PE=3 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 9.3e-10 Identity = 34/54 (62.96%), Postives = 38/54 (70.37%), Query Frame = 0
BLAST of MC00g0202 vs. ExPASy Swiss-Prot
Match: A3BKF2 (Protein LHCP TRANSLOCATION DEFECT OS=Oryza sativa subsp. japonica OX=39947 GN=LTD PE=2 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 9.3e-10 Identity = 34/54 (62.96%), Postives = 38/54 (70.37%), Query Frame = 0
BLAST of MC00g0202 vs. ExPASy Swiss-Prot
Match: Q8VY88 (Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana OX=3702 GN=LTD PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 4.3e-07 Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 0
BLAST of MC00g0202 vs. NCBI nr
Match: XP_038903413.1 (protein LHCP TRANSLOCATION DEFECT [Benincasa hispida]) HSP 1 Score: 66.2 bits (160), Expect = 7.65e-12 Identity = 36/54 (66.67%), Postives = 39/54 (72.22%), Query Frame = 0
BLAST of MC00g0202 vs. NCBI nr
Match: XP_008463435.1 (PREDICTED: protein LHCP TRANSLOCATION DEFECT [Cucumis melo] >KAA0033947.1 protein LHCP TRANSLOCATION DEFECT [Cucumis melo var. makuwa] >TYK02597.1 protein LHCP TRANSLOCATION DEFECT [Cucumis melo var. makuwa]) HSP 1 Score: 64.3 bits (155), Expect = 4.25e-11 Identity = 35/54 (64.81%), Postives = 39/54 (72.22%), Query Frame = 0
BLAST of MC00g0202 vs. NCBI nr
Match: XP_004152919.1 (protein LHCP TRANSLOCATION DEFECT [Cucumis sativus] >KGN56143.1 hypothetical protein Csa_010871 [Cucumis sativus]) HSP 1 Score: 64.3 bits (155), Expect = 4.25e-11 Identity = 35/54 (64.81%), Postives = 39/54 (72.22%), Query Frame = 0
BLAST of MC00g0202 vs. NCBI nr
Match: XP_022150983.1 (protein LHCP TRANSLOCATION DEFECT [Momordica charantia]) HSP 1 Score: 63.9 bits (154), Expect = 5.99e-11 Identity = 35/54 (64.81%), Postives = 38/54 (70.37%), Query Frame = 0
BLAST of MC00g0202 vs. NCBI nr
Match: XP_022985270.1 (protein LHCP TRANSLOCATION DEFECT [Cucurbita maxima]) HSP 1 Score: 63.9 bits (154), Expect = 6.10e-11 Identity = 35/54 (64.81%), Postives = 38/54 (70.37%), Query Frame = 0
BLAST of MC00g0202 vs. ExPASy TrEMBL
Match: A0A5D3BT07 (Protein LHCP TRANSLOCATION DEFECT OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00530 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 2.06e-11 Identity = 35/54 (64.81%), Postives = 39/54 (72.22%), Query Frame = 0
BLAST of MC00g0202 vs. ExPASy TrEMBL
Match: A0A0A0L309 (ANK_REP_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G078250 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 2.06e-11 Identity = 35/54 (64.81%), Postives = 39/54 (72.22%), Query Frame = 0
BLAST of MC00g0202 vs. ExPASy TrEMBL
Match: A0A1S3CJ75 (protein LHCP TRANSLOCATION DEFECT OS=Cucumis melo OX=3656 GN=LOC103501599 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 2.06e-11 Identity = 35/54 (64.81%), Postives = 39/54 (72.22%), Query Frame = 0
BLAST of MC00g0202 vs. ExPASy TrEMBL
Match: A0A6J1DAX7 (protein LHCP TRANSLOCATION DEFECT OS=Momordica charantia OX=3673 GN=LOC111019010 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.90e-11 Identity = 35/54 (64.81%), Postives = 38/54 (70.37%), Query Frame = 0
BLAST of MC00g0202 vs. ExPASy TrEMBL
Match: A0A6J1JAV9 (protein LHCP TRANSLOCATION DEFECT OS=Cucurbita maxima OX=3661 GN=LOC111483311 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.95e-11 Identity = 35/54 (64.81%), Postives = 38/54 (70.37%), Query Frame = 0
BLAST of MC00g0202 vs. TAIR 10
Match: AT1G50900.1 (Ankyrin repeat family protein ) HSP 1 Score: 54.3 bits (129), Expect = 3.1e-08 Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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