MC00g0187 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC00g0187
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionCytochrome c oxidase subunit 1
Locationscaffold18: 650828 .. 651225 (+)
RNA-Seq ExpressionMC00g0187
SyntenyMC00g0187
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCACATGTTTCTCAGTGCTGATTCGTATGGAATTAGCACGACCTGACGATCAAATTCTTGGTGGGAATCATCAACTTTATAATGTTTTACTAATGGCTCACGCTTTTTTAATGATCTTTTTATAGTTATGCCGGCGATGATAGGTGGATCTGGTAATTGGTCTGTTCTGATTCTGATAGGTGCACCTGACATGGCATTTCCACGATTAAATAATATTTCATTCTGGTTGTTGCCACCAAGTCTCTTGCTCCTATTAAGCTCAGCCTTAATAGAAGTGGGTAGCAGAACTGGGTGGACAGTCTATCCGCCCTTAAGTGGTATTACCAGCAATTCTGGAGGAGCAGTTGATTCAGCAATTTCCAGTCTTCATCTATTTGGTATTTCATCCATTTTA

mRNA sequence

ATGGGCACATGTTTCTCAGTGCTGATTCGTATGGAATTAGCACGACCTGACGATCAAATTCTTGGTGGGAATCATCAACTTTATAATGTTTTACTAATGGCTCACGCTTTTTTAATGATCTTTATAGTTATGCCGGCGATGATAGGTGGATCTGGTAATTGGTCTGTTCTGATTCTGATAGGTGCACCTGACATGGCATTTCCACGATTAAATAATATTTCATTCTGGTTGTTGCCACCAAGTCTCTTGCTCCTATTAAGCTCAGCCTTAATAGAAGTGGGTAGCAGAACTGGGTGGACAGTCTATCCGCCCTTAAGTGGTATTACCAGCAATTCTGGAGGAGCAGTTGATTCAGCAATTTCCAGTCTTCATCTATTTGGTATTTCATCCATTTTA

Coding sequence (CDS)

ATGGGCACATGTTTCTCAGTGCTGATTCGTATGGAATTAGCACGACCTGACGATCAAATTCTTGGTGGGAATCATCAACTTTATAATGTTTTACTAATGGCTCACGCTTTTTTAATGATCTTTATAGTTATGCCGGCGATGATAGGTGGATCTGGTAATTGGTCTGTTCTGATTCTGATAGGTGCACCTGACATGGCATTTCCACGATTAAATAATATTTCATTCTGGTTGTTGCCACCAAGTCTCTTGCTCCTATTAAGCTCAGCCTTAATAGAAGTGGGTAGCAGAACTGGGTGGACAGTCTATCCGCCCTTAAGTGGTATTACCAGCAATTCTGGAGGAGCAGTTGATTCAGCAATTTCCAGTCTTCATCTATTTGGTATTTCATCCATTTTA

Protein sequence

MGTCFSVLIRMELARPDDQILGGNHQLYNVLLMAHAFLMIFIVMPAMIGGSGNWSVLILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALIEVGSRTGWTVYPPLSGITSNSGGAVDSAISSLHLFGISSIL
Homology
[Close]
BLAST of MC00g0187 vs. ExPASy Swiss-Prot
Match: P08743 (Cytochrome c oxidase subunit 1 OS=Oenothera berteroana OX=3950 GN=COX1 PE=3 SV=2)

HSP 1 Score: 236.9 bits (603), Expect = 1.3e-61
Identity = 122/133 (91.73%), Postives = 127/133 (95.49%), Query Frame = 0 

Query: 1   MGTCFSVLIRMELARPDDQILGGNHQLYNVLLMAHAFLMI-FIVMPAMIGGSGNWSVLIL 60
           MGTCFSVLIRMELARP DQILGGNHQLYNVL+ AHAFLMI F+VMPAMIGGSGNWSV IL
Sbjct: 30  MGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGSGNWSVPIL 89

Query: 61  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALIEVGSRTGWTVYPPLSGITSNSGGAVDSA 120
           IGAPDMAFPRLNNISFWLLPPSLLLLLSSAL+EVGS TGWTVYPPLSGITS+SGGAVDSA
Sbjct: 90  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDSA 149

Query: 121 ISSLHLFGISSIL 133
           ISSLHL G+SSIL
Sbjct: 150 ISSLHLSGVSSIL 162

[Close]
BLAST of MC00g0187 vs. ExPASy Swiss-Prot
Match: P07506 (Cytochrome c oxidase subunit 1 OS=Glycine max OX=3847 GN=COX1 PE=3 SV=3)

HSP 1 Score: 236.9 bits (603), Expect = 1.3e-61
Identity = 122/133 (91.73%), Postives = 127/133 (95.49%), Query Frame = 0 

Query: 1   MGTCFSVLIRMELARPDDQILGGNHQLYNVLLMAHAFLMI-FIVMPAMIGGSGNWSVLIL 60
           MGTCFSVLIRMELARP DQILGGNHQLYNVL+ AHAFLMI F+VMPAMIGGSGNWSV IL
Sbjct: 30  MGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGSGNWSVPIL 89

Query: 61  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALIEVGSRTGWTVYPPLSGITSNSGGAVDSA 120
           IGAPDMAFPRLNNISFWLLPPSLLLLLSSAL+EVGS TGWTVYPPLSGITS+SGGAVDSA
Sbjct: 90  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDSA 149

Query: 121 ISSLHLFGISSIL 133
           ISSLHL G+SSIL
Sbjct: 150 ISSLHLSGVSSIL 162

[Close]
BLAST of MC00g0187 vs. ExPASy Swiss-Prot
Match: P12786 (Cytochrome c oxidase subunit 1 OS=Pisum sativum OX=3888 GN=COX1 PE=3 SV=2)

HSP 1 Score: 235.3 bits (599), Expect = 3.8e-61
Identity = 121/133 (90.98%), Postives = 126/133 (94.74%), Query Frame = 0 

Query: 1   MGTCFSVLIRMELARPDDQILGGNHQLYNVLLMAHAFLMI-FIVMPAMIGGSGNWSVLIL 60
           MGTCFSVLIRMELARP DQILGGNHQLYNVL+ AHAF MI F+VMPAMIGGSGNWSV IL
Sbjct: 30  MGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFFMIFFMVMPAMIGGSGNWSVPIL 89

Query: 61  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALIEVGSRTGWTVYPPLSGITSNSGGAVDSA 120
           IGAPDMAFPRLNNISFWLLPPSLLLLLSSAL+EVGS TGWTVYPPLSGITS+SGGAVDSA
Sbjct: 90  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDSA 149

Query: 121 ISSLHLFGISSIL 133
           ISSLHL G+SSIL
Sbjct: 150 ISSLHLSGVSSIL 162

[Close]
BLAST of MC00g0187 vs. ExPASy Swiss-Prot
Match: P68540 (Cytochrome c oxidase subunit 1 OS=Aegilops columnaris OX=4493 GN=COX1 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 6.1e-59
Identity = 119/133 (89.47%), Postives = 123/133 (92.48%), Query Frame = 0 

Query: 1   MGTCFSVLIRMELARPDDQILGGNHQLYNVLLMAHAFLMI-FIVMPAMIGGSGNWSVLIL 60
           MGTCFSVLIRMELARP DQILGGNHQLYNVL+ AHAFLMI F+VMPAMIGG GNW V IL
Sbjct: 30  MGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPIL 89

Query: 61  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALIEVGSRTGWTVYPPLSGITSNSGGAVDSA 120
           IGAPDMAFPRLNNISFWLLPPSLLLLLSSAL+EVGS TGWTVYPPLSGITS+SGGAVD A
Sbjct: 90  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLA 149

Query: 121 ISSLHLFGISSIL 133
           I SLHL GISSIL
Sbjct: 150 IFSLHLSGISSIL 162

[Close]
BLAST of MC00g0187 vs. ExPASy Swiss-Prot
Match: P68539 (Cytochrome c oxidase subunit 1 OS=Triticum aestivum OX=4565 GN=COX1 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 6.1e-59
Identity = 119/133 (89.47%), Postives = 123/133 (92.48%), Query Frame = 0 

Query: 1   MGTCFSVLIRMELARPDDQILGGNHQLYNVLLMAHAFLMI-FIVMPAMIGGSGNWSVLIL 60
           MGTCFSVLIRMELARP DQILGGNHQLYNVL+ AHAFLMI F+VMPAMIGG GNW V IL
Sbjct: 30  MGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPIL 89

Query: 61  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALIEVGSRTGWTVYPPLSGITSNSGGAVDSA 120
           IGAPDMAFPRLNNISFWLLPPSLLLLLSSAL+EVGS TGWTVYPPLSGITS+SGGAVD A
Sbjct: 90  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLA 149

Query: 121 ISSLHLFGISSIL 133
           I SLHL GISSIL
Sbjct: 150 IFSLHLSGISSIL 162

[Close]
BLAST of MC00g0187 vs. NCBI nr
Match: ACD44402.1 (cytochrome oxidase subunit 1, partial [Betula alleghaniensis] >ACD44403.1 cytochrome oxidase subunit 1, partial [Betula alleghaniensis] >ACD44404.1 cytochrome oxidase subunit 1, partial [Betula papyrifera] >ACD44405.1 cytochrome oxidase subunit 1, partial [Betula papyrifera] >ACD44406.1 cytochrome oxidase subunit 1, partial [Betula papyrifera])

HSP 1 Score: 235 bits (600), Expect = 2.45e-76
Identity = 122/133 (91.73%), Postives = 127/133 (95.49%), Query Frame = 0 

Query: 1   MGTCFSVLIRMELARPDDQILGGNHQLYNVLLMAHAFLMIF-IVMPAMIGGSGNWSVLIL 60
           MGTCFSVLIRMELARP DQILGGNHQLYNVL+ AHAFLMIF +VMPAMIGGSGNWSV IL
Sbjct: 16  MGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGSGNWSVPIL 75

Query: 61  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALIEVGSRTGWTVYPPLSGITSNSGGAVDSA 120
           IGAPDMAFPRLNNISFWLLPPSLLLLLSSAL+EVGS TGWTVYPPLSGITS+SGGAVDSA
Sbjct: 76  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDSA 135

Query: 121 ISSLHLFGISSIL 132
           ISSLHL G+SSIL
Sbjct: 136 ISSLHLSGVSSIL 148

[Close]
BLAST of MC00g0187 vs. NCBI nr
Match: ACD44545.1 (cytochrome oxidase subunit 1, partial [Trifolium pratense] >ACD44546.1 cytochrome oxidase subunit 1, partial [Trifolium pratense] >ACD44547.1 cytochrome oxidase subunit 1, partial [Trifolium pratense] >ACD44548.1 cytochrome oxidase subunit 1, partial [Trifolium repens])

HSP 1 Score: 235 bits (600), Expect = 2.45e-76
Identity = 122/133 (91.73%), Postives = 127/133 (95.49%), Query Frame = 0 

Query: 1   MGTCFSVLIRMELARPDDQILGGNHQLYNVLLMAHAFLMIF-IVMPAMIGGSGNWSVLIL 60
           MGTCFSVLIRMELARP DQILGGNHQLYNVL+ AHAFLMIF +VMPAMIGGSGNWSV IL
Sbjct: 16  MGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGSGNWSVPIL 75

Query: 61  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALIEVGSRTGWTVYPPLSGITSNSGGAVDSA 120
           IGAPDMAFPRLNNISFWLLPPSLLLLLSSAL+EVGS TGWTVYPPLSGITS+SGGAVDSA
Sbjct: 76  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDSA 135

Query: 121 ISSLHLFGISSIL 132
           ISSLHL G+SSIL
Sbjct: 136 ISSLHLSGVSSIL 148

[Close]
BLAST of MC00g0187 vs. NCBI nr
Match: ACD44388.1 (cytochrome oxidase subunit 1, partial [Acer saccharum] >ACD44389.1 cytochrome oxidase subunit 1, partial [Acer saccharinum] >ACD44390.1 cytochrome oxidase subunit 1, partial [Acer negundo] >ACD44392.1 cytochrome oxidase subunit 1, partial [Acer platanoides] >ACD44394.1 cytochrome oxidase subunit 1, partial [Acer rubrum] >ACD44474.1 cytochrome oxidase subunit 1, partial [Quercus alba] >ACD44478.1 cytochrome oxidase subunit 1, partial [Quercus macrocarpa] >ACD44480.1 cytochrome oxidase subunit 1, partial [Quercus rubra] >ACD44483.1 cytochrome oxidase subunit 1, partial [Quercus velutina])

HSP 1 Score: 235 bits (600), Expect = 2.45e-76
Identity = 122/133 (91.73%), Postives = 127/133 (95.49%), Query Frame = 0 

Query: 1   MGTCFSVLIRMELARPDDQILGGNHQLYNVLLMAHAFLMIF-IVMPAMIGGSGNWSVLIL 60
           MGTCFSVLIRMELARP DQILGGNHQLYNVL+ AHAFLMIF +VMPAMIGGSGNWSV IL
Sbjct: 16  MGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGSGNWSVPIL 75

Query: 61  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALIEVGSRTGWTVYPPLSGITSNSGGAVDSA 120
           IGAPDMAFPRLNNISFWLLPPSLLLLLSSAL+EVGS TGWTVYPPLSGITS+SGGAVDSA
Sbjct: 76  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDSA 135

Query: 121 ISSLHLFGISSIL 132
           ISSLHL G+SSIL
Sbjct: 136 ISSLHLSGVSSIL 148

[Close]
BLAST of MC00g0187 vs. NCBI nr
Match: AAT02449.1 (cytochrome oxidase subunit I, partial [Cephalotus follicularis])

HSP 1 Score: 235 bits (600), Expect = 2.62e-76
Identity = 122/133 (91.73%), Postives = 127/133 (95.49%), Query Frame = 0 

Query: 1   MGTCFSVLIRMELARPDDQILGGNHQLYNVLLMAHAFLMIF-IVMPAMIGGSGNWSVLIL 60
           MGTCFSVLIRMELARP DQILGGNHQLYNVL+ AHAFLMIF +VMPAMIGGSGNWSV IL
Sbjct: 24  MGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGSGNWSVPIL 83

Query: 61  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALIEVGSRTGWTVYPPLSGITSNSGGAVDSA 120
           IGAPDMAFPRLNNISFWLLPPSLLLLLSSAL+EVGS TGWTVYPPLSGITS+SGGAVDSA
Sbjct: 84  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDSA 143

Query: 121 ISSLHLFGISSIL 132
           ISSLHL G+SSIL
Sbjct: 144 ISSLHLSGVSSIL 156

[Close]
BLAST of MC00g0187 vs. NCBI nr
Match: RHN50434.1 (cytochrome c oxidase subunit 1 [Medicago truncatula])

HSP 1 Score: 235 bits (600), Expect = 6.30e-76
Identity = 122/133 (91.73%), Postives = 127/133 (95.49%), Query Frame = 0 

Query: 1   MGTCFSVLIRMELARPDDQILGGNHQLYNVLLMAHAFLMIF-IVMPAMIGGSGNWSVLIL 60
           MGTCFSVLIRMELARP DQILGGNHQLYNVL+ AHAFLMIF +VMPAMIGGSGNWSV IL
Sbjct: 1   MGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGSGNWSVPIL 60

Query: 61  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALIEVGSRTGWTVYPPLSGITSNSGGAVDSA 120
           IGAPDMAFPRLNNISFWLLPPSLLLLLSSAL+EVGS TGWTVYPPLSGITS+SGGAVDSA
Sbjct: 61  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDSA 120

Query: 121 ISSLHLFGISSIL 132
           ISSLHL G+SSIL
Sbjct: 121 ISSLHLSGVSSIL 133

[Close]
BLAST of MC00g0187 vs. ExPASy TrEMBL
Match: B5LDV5 (Cytochrome c oxidase subunit 1 (Fragment) OS=Acer negundo OX=4023 GN=COI PE=3 SV=1)

HSP 1 Score: 235 bits (600), Expect = 1.19e-76
Identity = 122/133 (91.73%), Postives = 127/133 (95.49%), Query Frame = 0 

Query: 1   MGTCFSVLIRMELARPDDQILGGNHQLYNVLLMAHAFLMIF-IVMPAMIGGSGNWSVLIL 60
           MGTCFSVLIRMELARP DQILGGNHQLYNVL+ AHAFLMIF +VMPAMIGGSGNWSV IL
Sbjct: 16  MGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGSGNWSVPIL 75

Query: 61  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALIEVGSRTGWTVYPPLSGITSNSGGAVDSA 120
           IGAPDMAFPRLNNISFWLLPPSLLLLLSSAL+EVGS TGWTVYPPLSGITS+SGGAVDSA
Sbjct: 76  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDSA 135

Query: 121 ISSLHLFGISSIL 132
           ISSLHL G+SSIL
Sbjct: 136 ISSLHLSGVSSIL 148

[Close]
BLAST of MC00g0187 vs. ExPASy TrEMBL
Match: B5LEB0 (Cytochrome c oxidase subunit 1 (Fragment) OS=Trifolium pratense OX=57577 GN=COI PE=3 SV=1)

HSP 1 Score: 235 bits (600), Expect = 1.19e-76
Identity = 122/133 (91.73%), Postives = 127/133 (95.49%), Query Frame = 0 

Query: 1   MGTCFSVLIRMELARPDDQILGGNHQLYNVLLMAHAFLMIF-IVMPAMIGGSGNWSVLIL 60
           MGTCFSVLIRMELARP DQILGGNHQLYNVL+ AHAFLMIF +VMPAMIGGSGNWSV IL
Sbjct: 16  MGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGSGNWSVPIL 75

Query: 61  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALIEVGSRTGWTVYPPLSGITSNSGGAVDSA 120
           IGAPDMAFPRLNNISFWLLPPSLLLLLSSAL+EVGS TGWTVYPPLSGITS+SGGAVDSA
Sbjct: 76  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDSA 135

Query: 121 ISSLHLFGISSIL 132
           ISSLHL G+SSIL
Sbjct: 136 ISSLHLSGVSSIL 148

[Close]
BLAST of MC00g0187 vs. ExPASy TrEMBL
Match: B5LDV4 (Cytochrome c oxidase subunit 1 (Fragment) OS=Acer saccharinum OX=75745 GN=COI PE=3 SV=1)

HSP 1 Score: 235 bits (600), Expect = 1.19e-76
Identity = 122/133 (91.73%), Postives = 127/133 (95.49%), Query Frame = 0 

Query: 1   MGTCFSVLIRMELARPDDQILGGNHQLYNVLLMAHAFLMIF-IVMPAMIGGSGNWSVLIL 60
           MGTCFSVLIRMELARP DQILGGNHQLYNVL+ AHAFLMIF +VMPAMIGGSGNWSV IL
Sbjct: 16  MGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGSGNWSVPIL 75

Query: 61  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALIEVGSRTGWTVYPPLSGITSNSGGAVDSA 120
           IGAPDMAFPRLNNISFWLLPPSLLLLLSSAL+EVGS TGWTVYPPLSGITS+SGGAVDSA
Sbjct: 76  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDSA 135

Query: 121 ISSLHLFGISSIL 132
           ISSLHL G+SSIL
Sbjct: 136 ISSLHLSGVSSIL 148

[Close]
BLAST of MC00g0187 vs. ExPASy TrEMBL
Match: B5LDV7 (Cytochrome c oxidase subunit 1 (Fragment) OS=Acer platanoides OX=4025 GN=COI PE=3 SV=1)

HSP 1 Score: 235 bits (600), Expect = 1.19e-76
Identity = 122/133 (91.73%), Postives = 127/133 (95.49%), Query Frame = 0 

Query: 1   MGTCFSVLIRMELARPDDQILGGNHQLYNVLLMAHAFLMIF-IVMPAMIGGSGNWSVLIL 60
           MGTCFSVLIRMELARP DQILGGNHQLYNVL+ AHAFLMIF +VMPAMIGGSGNWSV IL
Sbjct: 16  MGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGSGNWSVPIL 75

Query: 61  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALIEVGSRTGWTVYPPLSGITSNSGGAVDSA 120
           IGAPDMAFPRLNNISFWLLPPSLLLLLSSAL+EVGS TGWTVYPPLSGITS+SGGAVDSA
Sbjct: 76  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDSA 135

Query: 121 ISSLHLFGISSIL 132
           ISSLHL G+SSIL
Sbjct: 136 ISSLHLSGVSSIL 148

[Close]
BLAST of MC00g0187 vs. ExPASy TrEMBL
Match: B5LE43 (Cytochrome c oxidase subunit 1 (Fragment) OS=Quercus macrocarpa OX=519047 GN=COI PE=3 SV=1)

HSP 1 Score: 235 bits (600), Expect = 1.19e-76
Identity = 122/133 (91.73%), Postives = 127/133 (95.49%), Query Frame = 0 

Query: 1   MGTCFSVLIRMELARPDDQILGGNHQLYNVLLMAHAFLMIF-IVMPAMIGGSGNWSVLIL 60
           MGTCFSVLIRMELARP DQILGGNHQLYNVL+ AHAFLMIF +VMPAMIGGSGNWSV IL
Sbjct: 16  MGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGSGNWSVPIL 75

Query: 61  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALIEVGSRTGWTVYPPLSGITSNSGGAVDSA 120
           IGAPDMAFPRLNNISFWLLPPSLLLLLSSAL+EVGS TGWTVYPPLSGITS+SGGAVDSA
Sbjct: 76  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDSA 135

Query: 121 ISSLHLFGISSIL 132
           ISSLHL G+SSIL
Sbjct: 136 ISSLHLSGVSSIL 148

[Close]
BLAST of MC00g0187 vs. TAIR 10
Match: ATMG01360.1 (cytochrome oxidase )

HSP 1 Score: 227.6 bits (579), Expect = 5.7e-60
Identity = 118/133 (88.72%), Postives = 123/133 (92.48%), Query Frame = 0 

Query: 1   MGTCFSVLIRMELARPDDQILGGNHQLYNVLLMAHAFLMI-FIVMPAMIGGSGNWSVLIL 60
           MGTCFSVLIRMELARP DQILGGNHQLYNVL+ AHAFLMI F+VMPAMIGG GNW V IL
Sbjct: 30  MGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPIL 89

Query: 61  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALIEVGSRTGWTVYPPLSGITSNSGGAVDSA 120
           IGAPDMAFPRLNNISFWLLPPSLLLLLSSAL+EVGS TGWTVYPPLSGITS+SGGAVD A
Sbjct: 90  IGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLA 149

Query: 121 ISSLHLFGISSIL 133
           I SLHL G+SSIL
Sbjct: 150 IFSLHLSGVSSIL 162

The following BLAST results are available for this feature:
BLAST of MC00g0187 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P087431.3e-6191.73Cytochrome c oxidase subunit 1 OS=Oenothera berteroana OX=3950 GN=COX1 PE=3 SV=2[more]
P075061.3e-6191.73Cytochrome c oxidase subunit 1 OS=Glycine max OX=3847 GN=COX1 PE=3 SV=3[more]
P127863.8e-6190.98Cytochrome c oxidase subunit 1 OS=Pisum sativum OX=3888 GN=COX1 PE=3 SV=2[more]
P685406.1e-5989.47Cytochrome c oxidase subunit 1 OS=Aegilops columnaris OX=4493 GN=COX1 PE=3 SV=1[more]
P685396.1e-5989.47Cytochrome c oxidase subunit 1 OS=Triticum aestivum OX=4565 GN=COX1 PE=3 SV=1[more]
BLAST of MC00g0187 vs. NCBI nr
Match NameE-valueIdentityDescription
ACD44402.12.45e-7691.73cytochrome oxidase subunit 1, partial [Betula alleghaniensis] >ACD44403.1 cytoch... [more]
ACD44545.12.45e-7691.73cytochrome oxidase subunit 1, partial [Trifolium pratense] >ACD44546.1 cytochrom... [more]
ACD44388.12.45e-7691.73cytochrome oxidase subunit 1, partial [Acer saccharum] >ACD44389.1 cytochrome ox... [more]
AAT02449.12.62e-7691.73cytochrome oxidase subunit I, partial [Cephalotus follicularis][more]
RHN50434.16.30e-7691.73cytochrome c oxidase subunit 1 [Medicago truncatula][more]
BLAST of MC00g0187 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
B5LDV51.19e-7691.73Cytochrome c oxidase subunit 1 (Fragment) OS=Acer negundo OX=4023 GN=COI PE=3 SV... [more]
B5LEB01.19e-7691.73Cytochrome c oxidase subunit 1 (Fragment) OS=Trifolium pratense OX=57577 GN=COI ... [more]
B5LDV41.19e-7691.73Cytochrome c oxidase subunit 1 (Fragment) OS=Acer saccharinum OX=75745 GN=COI PE... [more]
B5LDV71.19e-7691.73Cytochrome c oxidase subunit 1 (Fragment) OS=Acer platanoides OX=4025 GN=COI PE=... [more]
B5LE431.19e-7691.73Cytochrome c oxidase subunit 1 (Fragment) OS=Quercus macrocarpa OX=519047 GN=COI... [more]
BLAST of MC00g0187 vs. TAIR 10
Match NameE-valueIdentityDescription
ATMG01360.15.7e-6088.72cytochrome oxidase [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000883Cytochrome c oxidase subunit IPRINTSPR01165CYCOXIDASEIcoord: 53..77
score: 71.8
coord: 95..107
score: 71.47
coord: 127..132
score: 25.11
coord: 26..49
score: 42.13
IPR000883Cytochrome c oxidase subunit IPFAMPF00115COX1coord: 2..132
e-value: 3.2E-26
score: 92.2
IPR000883Cytochrome c oxidase subunit IPANTHERPTHR10422CYTOCHROME C OXIDASE SUBUNIT 1coord: 1..132
IPR036927Cytochrome c oxidase-like, subunit I superfamilyGENE3D1.20.210.10coord: 1..132
e-value: 2.2E-44
score: 153.6
IPR036927Cytochrome c oxidase-like, subunit I superfamilySUPERFAMILY81442Cytochrome c oxidase subunit I-likecoord: 1..132
NoneNo IPR availablePANTHERPTHR10422:SF18CYTOCHROME C OXIDASE SUBUNIT 1coord: 1..132
IPR023616Cytochrome c oxidase-like, subunit I domainPROSITEPS50855COX1coord: 1..132
score: 23.857571

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC00g0187.1MC00g0187.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0022900 electron transport chain
biological_process GO:0006119 oxidative phosphorylation
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0009060 aerobic respiration
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0070469 respirasome
molecular_function GO:0004129 cytochrome-c oxidase activity
molecular_function GO:0020037 heme binding
molecular_function GO:0046872 metal ion binding