Lsi11G015630 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G015630
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Pyrroline-5-carboxylate reductase
Location	chr11: 23922186 .. 23922716 (-)
RNA-Seq Expression	Lsi11G015630
Synteny	Lsi11G015630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGACAATAAGGAAGAAGACCCAGAAACAGCCCCACAACAACAAGCAATACCACAATCGTACTCGTTGATTATGAGAGTGATGAGCAAAAGAAGAACATGGGTATGTTTATTTGTTGTAGTTTATGCTCTTCTTTTGTCATCTTGTTGGAATTTTCTTGTTTCTATACTGTCATGGTATAAATCTCAAGTGGGAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTTGGGTGGCCTGCGATTTATGCTTCTTTGCTTCTTGGGGCTGTTTTTGGGGTTATTTCGATGCTGGCTGCACTGGCTGTGATGATTCCAGCCACACTTGTGACATGGATTGCGATTGTTGTGTTGCTTTACTTCTTTGGGAAGCCGAGGAGGATGTTGGTGGTGGAGGGGAGGAAGATTACGAAAGAAATTTTTGGAGTTGTGGTTAAGATTTTGTTGAAGGAAGGGAATTTGGTGGCTGCTGTTTGTGCTGTTTTGGGTTACTTTGCACTTTTTAGGAAGACTAATGAAAGTTAG

mRNA sequence

ATGGGAGACAATAAGGAAGAAGACCCAGAAACAGCCCCACAACAACAAGCAATACCACAATCGTACTCGTTGATTATGAGAGTGATGAGCAAAAGAAGAACATGGGTATGTTTATTTGTTGTAGTTTATGCTCTTCTTTTGTCATCTTGTTGGAATTTTCTTGTTTCTATACTGTCATGGTATAAATCTCAAGTGGGAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTTGGGTGGCCTGCGATTTATGCTTCTTTGCTTCTTGGGGCTGTTTTTGGGGTTATTTCGATGCTGGCTGCACTGGCTGTGATGATTCCAGCCACACTTGTGACATGGATTGCGATTGTTGTGTTGCTTTACTTCTTTGGGAAGCCGAGGAGGATGTTGGTGGTGGAGGGGAGGAAGATTACGAAAGAAATTTTTGGAGTTGTGGTTAAGATTTTGTTGAAGGAAGGGAATTTGGTGGCTGCTGTTTGTGCTGTTTTGGGTTACTTTGCACTTTTTAGGAAGACTAATGAAAGTTAG

Coding sequence (CDS)

ATGGGAGACAATAAGGAAGAAGACCCAGAAACAGCCCCACAACAACAAGCAATACCACAATCGTACTCGTTGATTATGAGAGTGATGAGCAAAAGAAGAACATGGGTATGTTTATTTGTTGTAGTTTATGCTCTTCTTTTGTCATCTTGTTGGAATTTTCTTGTTTCTATACTGTCATGGTATAAATCTCAAGTGGGAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTTGGGTGGCCTGCGATTTATGCTTCTTTGCTTCTTGGGGCTGTTTTTGGGGTTATTTCGATGCTGGCTGCACTGGCTGTGATGATTCCAGCCACACTTGTGACATGGATTGCGATTGTTGTGTTGCTTTACTTCTTTGGGAAGCCGAGGAGGATGTTGGTGGTGGAGGGGAGGAAGATTACGAAAGAAATTTTTGGAGTTGTGGTTAAGATTTTGTTGAAGGAAGGGAATTTGGTGGCTGCTGTTTGTGCTGTTTTGGGTTACTTTGCACTTTTTAGGAAGACTAATGAAAGTTAG

Protein sequence

MGDNKEEDPETAPQQQAIPQSYSLIMRVMSKRRTWVCLFVVVYALLLSSCWNFLVSILSWYKSQVGASSSSSSSSSSSFGWPAIYASLLLGAVFGVISMLAALAVMIPATLVTWIAIVVLLYFFGKPRRMLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES

Homology

[Close]

BLAST of Lsi11G015630 vs. ExPASy TrEMBL
Match: A0A5A7SLG9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003370 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.5e-74
Identity = 159/176 (90.34%), Postives = 164/176 (93.18%), Query Frame = 0


Query: 1   MGDNKEEDPETAPQQQAIPQSYSLIMRVMSKRRTWVCLFVVVYALLLSSCWNFLVSILSW 60
           M DNKEEDPETAP QQAIP+SYSLIMRVMSKRRTWVCLFV+VYALLLSS WNFLVSILSW
Sbjct: 1   MADNKEEDPETAPPQQAIPKSYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60

Query: 61  YKSQVGASSSSSSSSSSSFGWPAIYASLLLGAVFGVISMLAALAVMIPATLVTWIAIVVL 120
           YKSQV A       SSSSFGWPAIYASLLLG VFGVISM+AALAVMIPATLVTWIAIVVL
Sbjct: 61  YKSQVEA-------SSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVL 120

Query: 121 LYFFGKPRRMLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES 177
           LYFFGKPRR+LVVEGRKITKEIFGVV+KILLKEGNLVAAVCAVLGYFALFRKTNES
Sbjct: 121 LYFFGKPRRLLVVEGRKITKEIFGVVIKILLKEGNLVAAVCAVLGYFALFRKTNES 169

[Close]

BLAST of Lsi11G015630 vs. ExPASy TrEMBL
Match: A0A1S3C0S4 (uncharacterized protein LOC103495508 OS=Cucumis melo OX=3656 GN=LOC103495508 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.5e-74
Identity = 159/176 (90.34%), Postives = 164/176 (93.18%), Query Frame = 0


Query: 1   MGDNKEEDPETAPQQQAIPQSYSLIMRVMSKRRTWVCLFVVVYALLLSSCWNFLVSILSW 60
           M DNKEEDPETAP QQAIP+SYSLIMRVMSKRRTWVCLFV+VYALLLSS WNFLVSILSW
Sbjct: 1   MADNKEEDPETAPPQQAIPKSYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60

Query: 61  YKSQVGASSSSSSSSSSSFGWPAIYASLLLGAVFGVISMLAALAVMIPATLVTWIAIVVL 120
           YKSQV A       SSSSFGWPAIYASLLLG VFGVISM+AALAVMIPATLVTWIAIVVL
Sbjct: 61  YKSQVEA-------SSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVL 120

Query: 121 LYFFGKPRRMLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES 177
           LYFFGKPRR+LVVEGRKITKEIFGVV+KILLKEGNLVAAVCAVLGYFALFRKTNES
Sbjct: 121 LYFFGKPRRLLVVEGRKITKEIFGVVIKILLKEGNLVAAVCAVLGYFALFRKTNES 169

[Close]

BLAST of Lsi11G015630 vs. ExPASy TrEMBL
Match: A0A0A0K1T7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G048040 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.6e-73
Identity = 157/176 (89.20%), Postives = 163/176 (92.61%), Query Frame = 0


Query: 1   MGDNKEEDPETAPQQQAIPQSYSLIMRVMSKRRTWVCLFVVVYALLLSSCWNFLVSILSW 60
           M DNKEE+PETAP QQAIP+SYSL M+VMSKRRTWVCLFV+VYALLLSS WNFLVSILSW
Sbjct: 1   MADNKEEEPETAPPQQAIPKSYSLFMKVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60

Query: 61  YKSQVGASSSSSSSSSSSFGWPAIYASLLLGAVFGVISMLAALAVMIPATLVTWIAIVVL 120
           YKSQV A       SSSSFGWPAIYASLLLG VFGVISM+AALAVMIPATLVTWIAIVVL
Sbjct: 61  YKSQVEA-------SSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVL 120

Query: 121 LYFFGKPRRMLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES 177
           LYFFGKPRR+LVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES
Sbjct: 121 LYFFGKPRRLLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES 169

[Close]

BLAST of Lsi11G015630 vs. ExPASy TrEMBL
Match: A0A6J1JNW4 (uncharacterized protein LOC111486173 OS=Cucurbita maxima OX=3661 GN=LOC111486173 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 5.9e-68
Identity = 151/176 (85.80%), Postives = 157/176 (89.20%), Query Frame = 0


Query: 1   MGDNKEEDPETAPQQQAIPQSYSLIMRVMSKRRTWVCLFVVVYALLLSSCWNFLVSILSW 60
           M DNKEEDPET       PQ YSLIMRVMSKRRTWVCLFV+VYALLLSS WNFL SILSW
Sbjct: 1   MADNKEEDPET-----IAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSW 60

Query: 61  YKSQVGASSSSSSSSSSSFGWPAIYASLLLGAVFGVISMLAALAVMIPATLVTWIAIVVL 120
           YKSQV     SSSSSSSSFGWPAIYASLLLGAVFGV+SM+AALAVM+PATLVTWI IVVL
Sbjct: 61  YKSQV---EVSSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVL 120

Query: 121 LYFFGKPRRMLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES 177
           LYFFGKP+R LVVEGRKITKEIFGVV KILLKEGNLVAAVCAVLGYFALFRK+NES
Sbjct: 121 LYFFGKPKRALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168

[Close]

BLAST of Lsi11G015630 vs. ExPASy TrEMBL
Match: A0A6J1ES94 (uncharacterized protein LOC111437107 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437107 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 6.5e-67
Identity = 149/176 (84.66%), Postives = 155/176 (88.07%), Query Frame = 0


Query: 1   MGDNKEEDPETAPQQQAIPQSYSLIMRVMSKRRTWVCLFVVVYALLLSSCWNFLVSILSW 60
           M DNKEEDPET       PQ YSLIMRVMSKRRTWVCLFV+VYALLLSS WNFL SILSW
Sbjct: 1   MADNKEEDPET-----IAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSW 60

Query: 61  YKSQVGASSSSSSSSSSSFGWPAIYASLLLGAVFGVISMLAALAVMIPATLVTWIAIVVL 120
           YKSQV       SSSSSSFGWPAIYASLLLGAVFGV+SM+AALAVM+PATLVTWI IVVL
Sbjct: 61  YKSQV-----EVSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVL 120

Query: 121 LYFFGKPRRMLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES 177
           LYFFGKP+R LVVEGRKITKEIFGVV KILLKEGNLVAAVCAVLGYFALFRK+NES
Sbjct: 121 LYFFGKPKRALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 166

[Close]

BLAST of Lsi11G015630 vs. NCBI nr
Match: XP_038888812.1 (uncharacterized protein LOC120078600 [Benincasa hispida])

HSP 1 Score: 296.2 bits (757), Expect = 1.9e-76
Identity = 163/171 (95.32%), Postives = 166/171 (97.08%), Query Frame = 0


Query: 6   EEDPETAPQQQAIPQSYSLIMRVMSKRRTWVCLFVVVYALLLSSCWNFLVSILSWYKSQV 65
           EE+PETA  QQAIPQSYSL MRVMSKRRTWVCLFVVVYALLLSSCWNFLVSILSWYKSQV
Sbjct: 2   EENPETASPQQAIPQSYSLFMRVMSKRRTWVCLFVVVYALLLSSCWNFLVSILSWYKSQV 61

Query: 66  GASSSSSSSSSSSFGWPAIYASLLLGAVFGVISMLAALAVMIPATLVTWIAIVVLLYFFG 125
            ASSSSSSSSSSSFGWPAIYASLLLG VFGV+SM+AALAVMIPATLVTWIAIVVLLYFFG
Sbjct: 62  EASSSSSSSSSSSFGWPAIYASLLLGGVFGVLSMMAALAVMIPATLVTWIAIVVLLYFFG 121

Query: 126 KPRRMLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES 177
           KPRRMLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES
Sbjct: 122 KPRRMLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES 172

[Close]

BLAST of Lsi11G015630 vs. NCBI nr
Match: XP_008455313.1 (PREDICTED: uncharacterized protein LOC103495508 [Cucumis melo] >KAA0031570.1 uncharacterized protein E6C27_scaffold139G003360 [Cucumis melo var. makuwa] >TYK07021.1 uncharacterized protein E5676_scaffold13G003370 [Cucumis melo var. makuwa])

HSP 1 Score: 288.1 bits (736), Expect = 5.1e-74
Identity = 159/176 (90.34%), Postives = 164/176 (93.18%), Query Frame = 0


Query: 1   MGDNKEEDPETAPQQQAIPQSYSLIMRVMSKRRTWVCLFVVVYALLLSSCWNFLVSILSW 60
           M DNKEEDPETAP QQAIP+SYSLIMRVMSKRRTWVCLFV+VYALLLSS WNFLVSILSW
Sbjct: 1   MADNKEEDPETAPPQQAIPKSYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60

Query: 61  YKSQVGASSSSSSSSSSSFGWPAIYASLLLGAVFGVISMLAALAVMIPATLVTWIAIVVL 120
           YKSQV A       SSSSFGWPAIYASLLLG VFGVISM+AALAVMIPATLVTWIAIVVL
Sbjct: 61  YKSQVEA-------SSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVL 120

Query: 121 LYFFGKPRRMLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES 177
           LYFFGKPRR+LVVEGRKITKEIFGVV+KILLKEGNLVAAVCAVLGYFALFRKTNES
Sbjct: 121 LYFFGKPRRLLVVEGRKITKEIFGVVIKILLKEGNLVAAVCAVLGYFALFRKTNES 169

[Close]

BLAST of Lsi11G015630 vs. NCBI nr
Match: XP_011658746.1 (uncharacterized protein LOC101207711 [Cucumis sativus] >KGN43620.1 hypothetical protein Csa_020288 [Cucumis sativus])

HSP 1 Score: 284.3 bits (726), Expect = 7.3e-73
Identity = 157/176 (89.20%), Postives = 163/176 (92.61%), Query Frame = 0


Query: 1   MGDNKEEDPETAPQQQAIPQSYSLIMRVMSKRRTWVCLFVVVYALLLSSCWNFLVSILSW 60
           M DNKEE+PETAP QQAIP+SYSL M+VMSKRRTWVCLFV+VYALLLSS WNFLVSILSW
Sbjct: 1   MADNKEEEPETAPPQQAIPKSYSLFMKVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60

Query: 61  YKSQVGASSSSSSSSSSSFGWPAIYASLLLGAVFGVISMLAALAVMIPATLVTWIAIVVL 120
           YKSQV A       SSSSFGWPAIYASLLLG VFGVISM+AALAVMIPATLVTWIAIVVL
Sbjct: 61  YKSQVEA-------SSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVL 120

Query: 121 LYFFGKPRRMLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES 177
           LYFFGKPRR+LVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES
Sbjct: 121 LYFFGKPRRLLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES 169

[Close]

BLAST of Lsi11G015630 vs. NCBI nr
Match: XP_023531926.1 (uncharacterized protein LOC111794046 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.9 bits (681), Expect = 1.2e-67
Identity = 151/176 (85.80%), Postives = 157/176 (89.20%), Query Frame = 0


Query: 1   MGDNKEEDPETAPQQQAIPQSYSLIMRVMSKRRTWVCLFVVVYALLLSSCWNFLVSILSW 60
           M DNKEEDPET       PQ YSLIMRVMSKRRTWVCLFV+VYALLLSS WNFLVSILSW
Sbjct: 1   MADNKEEDPET-----IAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60

Query: 61  YKSQVGASSSSSSSSSSSFGWPAIYASLLLGAVFGVISMLAALAVMIPATLVTWIAIVVL 120
           YKSQV      SSSSSSSFGWPAIYASLLLGAVFGV+SM+AALAVM+PATLVTWI IVVL
Sbjct: 61  YKSQV----EVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVL 120

Query: 121 LYFFGKPRRMLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES 177
           LYFFGKP+R LVVEGRKITKEIFGVV KILLKEGNLVAAVCAVLGYFALFRK+NES
Sbjct: 121 LYFFGKPKRALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 167

[Close]

BLAST of Lsi11G015630 vs. NCBI nr
Match: XP_022988973.1 (uncharacterized protein LOC111486173 [Cucurbita maxima])

HSP 1 Score: 266.9 bits (681), Expect = 1.2e-67
Identity = 151/176 (85.80%), Postives = 157/176 (89.20%), Query Frame = 0


Query: 1   MGDNKEEDPETAPQQQAIPQSYSLIMRVMSKRRTWVCLFVVVYALLLSSCWNFLVSILSW 60
           M DNKEEDPET       PQ YSLIMRVMSKRRTWVCLFV+VYALLLSS WNFL SILSW
Sbjct: 1   MADNKEEDPET-----IAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSW 60

Query: 61  YKSQVGASSSSSSSSSSSFGWPAIYASLLLGAVFGVISMLAALAVMIPATLVTWIAIVVL 120
           YKSQV     SSSSSSSSFGWPAIYASLLLGAVFGV+SM+AALAVM+PATLVTWI IVVL
Sbjct: 61  YKSQV---EVSSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVL 120

Query: 121 LYFFGKPRRMLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES 177
           LYFFGKP+R LVVEGRKITKEIFGVV KILLKEGNLVAAVCAVLGYFALFRK+NES
Sbjct: 121 LYFFGKPKRALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168

[Close]

BLAST of Lsi11G015630 vs. TAIR 10
Match: AT1G03730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G03600.1); Has 50 Blast hits to 50 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 188.0 bits (476), Expect = 6.7e-48
Identity = 106/171 (61.99%), Postives = 130/171 (76.02%), Query Frame = 0


Query: 8   DPETAPQQQ--AIPQSYSLIMRVMSKRRTWVCLFVVVYALLLSSCWNFLVSILSWYKSQV 67
           DP  +P+    + P+SY + MR+MSKRRTWVCLFV VYA+LL+S WNFL S+LSWYK Q 
Sbjct: 3   DPTGSPRTSNGSPPRSYLIFMRIMSKRRTWVCLFVAVYAILLASSWNFLTSVLSWYKLQY 62

Query: 68  GASSSSSSSSSSSFGWPAIYASLLLGAVFGVISMLAALAVMIPATLVTWIAIVVLLYFFG 127
            +S S S         PA+YAS++LGAVFG +SM+AA AV +PA +V WI++VVLL FFG
Sbjct: 63  TSSPSPSR-------LPAVYASVVLGAVFGAMSMVAAAAVAVPAVMVIWISVVVLLAFFG 122

Query: 128 KPRRMLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES 177
           K RR+LVVE RKIT+E+FG V K+LLKEGN VAAVCAVLGYF L RK  +S
Sbjct: 123 KSRRVLVVEARKITREVFGFVFKVLLKEGNAVAAVCAVLGYFILIRKDFDS 166

[Close]

BLAST of Lsi11G015630 vs. TAIR 10
Match: AT4G03600.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 174.5 bits (441), Expect = 7.6e-44
Identity = 95/162 (58.64%), Postives = 124/162 (76.54%), Query Frame = 0


Query: 15  QQAIPQSYSLIMRVMSKRRTWVCLFVVVYALLLSSCWNFLVSILSWYKSQVGASSSSSSS 74
           Q   P+SY + + +MSKRRTWVCLF+ VYA+L+SS WN L S+L+WYK Q  +S+S  S 
Sbjct: 4   QTESPRSYHIFITIMSKRRTWVCLFIAVYAILVSSSWNLLRSVLNWYKLQYTSSNSDYSP 63

Query: 75  SSSSFGWPAIYASLLLGAVFGVISMLAALAVMIPATLVTWIAIVVLLYFFGKPRRMLVVE 134
           S      PA+YAS++LGA+FG +SM+AA+ V +PA +V WI++VVLL FFGK RR+LVVE
Sbjct: 64  SR----LPAVYASVVLGAMFGAMSMVAAMTVAVPAVMVIWISVVVLLAFFGKSRRVLVVE 123

Query: 135 GRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES 177
           GRKIT+E+ G V K+LLKEGN+VAA CAVL YF L R+  +S
Sbjct: 124 GRKITREVVGFVFKVLLKEGNVVAAFCAVLAYFLLIRRDFDS 161

[Close]

BLAST of Lsi11G015630 vs. TAIR 10
Match: AT4G28330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28340.1); Has 48 Blast hits to 48 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 157.5 bits (397), Expect = 9.6e-39
Identity = 91/171 (53.22%), Postives = 118/171 (69.01%), Query Frame = 0


Query: 6   EEDPETAPQQQAIPQSYSLIMRVMSKRRTWVCLFVVVYALLLSSCWNFLVSILSWYKSQV 65
           +E+PET         SY L +RV+SKRRTW CLF+VVYA+LLSS WN L SI++WY    
Sbjct: 4   KEEPETM-------TSYKLFLRVISKRRTWACLFLVVYAILLSSSWNSLNSIVNWY---- 63

Query: 66  GASSSSSSSSSSSFGWPAIYASLLLGAVFGVISMLAALAVMIPATLVTWIAIVVLLYFFG 125
                   +  +S G PAIYAS+LLGAVFGV+SM AAL + +PA +V WI++VV + F G
Sbjct: 64  ------GENHQTSSGLPAIYASVLLGAVFGVLSMAAALFIAVPAIVVIWISVVVTMAFAG 123

Query: 126 KPRRMLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES 177
           K R+ +V+EGRK+TKEI G V ++LLKEGN VA +CA+L YF  F   + S
Sbjct: 124 KSRKRVVIEGRKVTKEIAGFVFRVLLKEGNFVALLCALLAYFVFFNSYSSS 157

[Close]

BLAST of Lsi11G015630 vs. TAIR 10
Match: AT4G28340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28330.1); Has 46 Blast hits to 46 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 148.3 bits (373), Expect = 5.9e-36
Identity = 87/157 (55.41%), Postives = 112/157 (71.34%), Query Frame = 0


Query: 14  QQQAIPQSYSLIMRVMSKRRTWVCLFVVVYALLLSSCWNFLVSILSWYKSQVGASSSSSS 73
           ++Q    SY L +RV+SKRRTWVCLF+VVYA+LLSS  N L SI++WY            
Sbjct: 5   EEQETMTSYKLFLRVISKRRTWVCLFLVVYAVLLSSSRNSLNSIVNWY----------GE 64

Query: 74  SSSSSFGWPAIYASLLLGAVFGVISMLAALAVMIPATLVTWIAIVVLLYFFGKPRRMLVV 133
           +  +S G PAIYAS+LLGAVFGV+SM AAL + +PA +V WI++VV + F  K R+ +V+
Sbjct: 65  NHQTSSGLPAIYASVLLGAVFGVLSMAAALFIAVPAIVVIWISVVVTIAFPVKSRKKVVI 124

Query: 134 EGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALF 171
           EGRK+TKEI G V K+LLKEGN VA +CAV+ YF  F
Sbjct: 125 EGRKVTKEIAGYVFKVLLKEGNFVALLCAVIAYFVFF 151

The following BLAST results are available for this feature:

BLAST of Lsi11G015630 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi11G015630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SLG9	2.5e-74	90.34	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C0S4	2.5e-74	90.34	uncharacterized protein LOC103495508 OS=Cucumis melo OX=3656 GN=LOC103495508 PE=...	[more]
A0A0A0K1T7	3.6e-73	89.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G048040 PE=4 SV=1	[more]
A0A6J1JNW4	5.9e-68	85.80	uncharacterized protein LOC111486173 OS=Cucurbita maxima OX=3661 GN=LOC111486173...	[more]
A0A6J1ES94	6.5e-67	84.66	uncharacterized protein LOC111437107 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Lsi11G015630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888812.1	1.9e-76	95.32	uncharacterized protein LOC120078600 [Benincasa hispida]	[more]
XP_008455313.1	5.1e-74	90.34	PREDICTED: uncharacterized protein LOC103495508 [Cucumis melo] >KAA0031570.1 unc...	[more]
XP_011658746.1	7.3e-73	89.20	uncharacterized protein LOC101207711 [Cucumis sativus] >KGN43620.1 hypothetical ...	[more]
XP_023531926.1	1.2e-67	85.80	uncharacterized protein LOC111794046 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022988973.1	1.2e-67	85.80	uncharacterized protein LOC111486173 [Cucurbita maxima]	[more]

BLAST of Lsi11G015630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03730.1	6.7e-48	61.99	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G03600.1	7.6e-44	58.64	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G28330.1	9.6e-39	53.22	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G28340.1	5.9e-36	55.41	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34656	PYRROLINE-5-CARBOXYLATE REDUCTASE	coord: 12..175
None	No IPR available	PANTHER	PTHR34656:SF1	PYRROLINE-5-CARBOXYLATE REDUCTASE	coord: 12..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G015630.1	Lsi11G015630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane