Lsi11G010040 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G010040
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	DEAD-box ATP-dependent RNA helicase FANCM
Location	chr11: 16958947 .. 16971252 (-)
RNA-Seq Expression	Lsi11G010040
Synteny	Lsi11G010040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGTATTGGTCGACCATTTTAGTAGGTGCCAATAGTAGTCATGGCATGCCCTCATTATTAGTATACCACCGTTTTTTGTTCTAGTTTTATTTCTGAAGTTTTTTTATTTCTATTTCATATTTCAAGTATTTGAATATTCCATAGTCTTGAGAGCATGATATTATGGTATTGTTTGAATATTACTGGTCAGAGCAAAATGTATAATCTATTGATGTACACTTTTTTTTTTTCCTTCTAATAATCATTTTGTCCTTATTTAGGGTTCCCATCTTGTTTTCATATTTTTCTCTCTCTTTTTCTCTTTTCATCTCCTGCACTTTCTTGATTGTTTGCTCCTCTTGGGATATAGCGATGGCTATTGACTCTAAAAACCCACAGAATTACTAAGAAAAATCGTTGGATTTATAAATTCTTGTTTTGGTATCTATTCTTATTCAGTTTTTGTAATGCATGTGCATTTCTTCAATGTTGTGTAAGTTTGGTTTGAGGGACTTGAGTTGGTAAGAGTGTTAGATGATATAAGATTAAATTTGCCTTCACCCATTAGCTTAAGCTTTTGGGTCAATTGGCGATTTAACATGGTATTAGAGCAGGTGGTCCAGGGAGGTCTTGTGTTCAAGCCCTACATTGTTGTTACCTCCTCAATTAATATTGATTTACACTTGTTGGGTCTTCTTCATATTTCAAGCTCACAAGTGAGGGGGAGTGCTAGATGATATAAGATTAAATTTGCCTTCACCCATTAGCTTAAGTTTTTGGATCAATTGGCGATTTAATAAAGAGGCTTTCTTTTGGATGTTGGATTGCATTTAGAAATCTCGGCAGTGAAATTTTGGTTCTTATGCAGGGGGACAAATGGATGGTTGTAGTAGCTGACTCAAAACTAACCCCATGGGCTAAGCATTGTAGTAAAGACCTTAGATTCAATTAAGTGGTCGTGGTTTAAAGTATCCTGAGTCACATATCTTGGATATTAGATGTCCTATAAGTCTCTAGTTTATCAAATAATAGAGTTAGGTGGCGGTCCTTGCTTTAGAATCTAATGCATCCGGAATTAACTCAATATCGTAAAAGTTGAGAAACTTGAGTTGGTAGAAACGTGCTTTTGGTTTTAGAGTTATAAGCAGTGAATTTTCTATCCATTTGTGCAAAGGAAAATGATTGTAGTAGCTAACTCAAAACTTATCCCAATGCCTCTAGATTTAAAGTATTCATGGGTTCATAATAACCCCTGTTACATATGTTAGGTTAAATTTGTAGACTACTGAATAACAGGTCACTTTTGGTTTGAAACCAATTTTCTTGATGAGTATGATGCCAATGGCTGAGATGTAATTGAAAGCTTCGACATGTTAGTTGACAAAGTAACTTTGTTGCAGAAACTAAGGATCCACAAGATTCAAGGGTGATCATATTCTCAAATTTCAGGGGAAGTGTAAGGTGAAATATTTTCTCCAAGTTCAATTTTGTAGTGTTCGATGATTTAGAAGTGCACACATTCCAATCAATTATTCATCCTTAAACTTGCCTCAATGTGGTAATAATACTTAGGGACATTATGGGTGCACTATCCAAGATTGAAGACATTGTCAGAGCTACTGAGTTTATTGGTCAAAGCTCAGGTTTGCAATTTCATTTTTCTTCATTTTTTGTTATTATTTAAGTTAATGATGCAGTATCTTTTGGGATAATCTTGTCTTTCTTGGTCCTAATCTTGTAGTTATTGACCTTTCTTGGATTAATCTTTCTTCTTTTAAGTTGTATTTTTAAGCAGCTTGTCTTTTCACCTATGACCTCCCGGTAAAAGTTATTGTATTTTCTTTAAGTTAGATTCTCTTTACTTTTACCCTGCCGCTAAAAGGGTAATTTAGGTTGTAACTTTTGTCTTCCAGCTTATAAATAAGGCCAAAGGCTGTCTTTTAAGGCTAATGAGAAAATCAGTATTCTTTTGAGAACTTATGTACATCAGTTAATTACTAGTTTAGCCCCAAAACTTTCAAAATTGTGTTTTTATAGTGTATGAAACTTATAGACTTACATTGAAAGTTTAGAGGCTTATGATAACTTTTTAAATTCTGGGACCTTCTGTTAGACAATCCTAAAACTTGAACTATGACACTTGTAGTTTAACCTATTATTTATTATTTATTATGTGAAAACTGTTATTTTCTTGTCTTTATCTCAATGTCTCTGCATTTCTTTTGTGGTTACAGTCGATTTTTTCTTTTCTTTTAATTCTTCATAGAAGGTGGGAGTTAATCTTTGGTTTAGCATGTTGATATAATATTAAATTTATCATAACCCATCAGCTTAAGCTTTTGGGTTTATTGGTGATTTCACGATATTGGATATGACCATCTTTTTGCACATAAGCACATGTGAGATGATTATATTGTAGAGCATGCTCTTTGGACTATTTAATTTGATCTGGATAGTTTTCCTGTTGAAAAGCCAATAGGAAAAGTTTGTCAATTGAAATTGTGTTTAAGTATATCTAAAATGCTCCAGTTATGTTCTGTTTGCAATTTATTAGAGCTTGGACTTCTTGTATTTGTTGGGACATATTTTTTATGTTGGACAAGCTACTAAGTCCGGAGAATTGCAGGAAAATCTCTCAAAGGTCAATCACAAAAGGTTCAACAAGCTGTTTTGGAGGTAGGCAATCGGGGTTTGCAGGTACTATCCCTATTCTCTATTAGTTACCTGTACTGAATTATATACTTTTGCACAGAAATTTCGTGCTGGCGGGTACAATGTCATTGTTGCCACATGCATTGGGGAAGAAGGTCTTGATATAATGGAAGTTGATCTTGTCATCTGTTTTGATGCAAACGTTTCACCAATAAGAATGATTCAGCGGATGGGTAGAACTGGAAGGAAGCATGATGGACGAGTGGATATCCTTGAACATTCGATTATCAATTAATCTCATTTATTGAATTCCAAATTTGTTATATCTAACATTGTTTTTTGTCAGTTTAGCAAGATATCGTGCCTACTTGTTTGTTAATTGTTTTTAAAAAAAAAAAAATCTTGAAAACACTTAACCCAATAAACACAGATATAGATGTGATGATGTGCATTTTCTTAATTATTAAGACTGATACAACAAGATACAATTATTAAAATGTAGACTTATAATATAATATTTGAAAATGCACACCTTTTATTAATTTTCCCTTAATAAGTTTATTTTATTCTATGATATGTCAGCTCATTTCCTGTGTTTTAAACAAGAAACAACTTCTCAAAAATGAAATTGTTTGAAGGTTACAAACTCCCAAAGGCATTGAAAATTAAAAGGGGAAAAAAAAAATTCAAAATAGGAATTTAAAAACAATTACAATCAAATGAAGCTGACCAATGAACAATAAAGATCAAATAAACCAATGTAACAAAGAACAACGAAACAAAGAGAACGGAAGATGGAAACAAAAGAGAAAAATTGCATGGAGGATCAAGTGCTTCAATTGAGTTCTATATATCATTAAAGTGGAAACAATACAAGTATTTATAAGCAAATAATAAAACTAACCACTAATGCACTGACCTTAAAAATCTACCACTAACCTTGAAATTCTCATCCATTAATCCCACTAAGCCATTAGGCCACTATCCTCTATTAACCCACTAACACAAAAAGAAACAAAACTAATTTAATTACTTGCAAACCAAGTTTACACTAATTCTTAACAAGCTCAACTTAGAAAAAAACTTGAAAGGCAACCACAGCGGCTGAAAACATAAACAAGAACCAAGACTAATGAAACTTTCTGAATTTCCTTTTTCAAAAAAGATCTAGGGAGTTGACAAAAAACCACATAGGCAACCTTCACATCAGCCGCATCAAATTGTTCTGTGATTTTTATACCATGCAAAACTGTAAAAGTAGTATCAATGAAATGATAATCAGAGCAAAGGTGATGTTGATGTAATAGGTTTTGGATAATTTGGTCAATTCAAGCTAATCTTGGTAAATCCTTGATTAATTACATTTTAACTACCAAATTAGGTTTTTAACCTTTTTTAGTTATCTTTTAGGACACTTGTAATTCTCTATAAATAGAGAGTTCCCCATTGTATTTGATATATTCTCATTAATAAAAGACTTTGGTTTGGATTCTTGAAGATTTCTCTCGTTTTAATACTTAGGCTACATCAGATGTGGATGTGGCTCTCTCTTTTCTGGTCTCCTATCATTCCTCTCCTCTCCTTTCTCCGGCTAGTTTTCCTCCCTGTTTAACTTCCCTTCTCGTCGAGCTTCCTTCTCCCGTAAGTTTTCATATTCATTTAGCAGCCCAATCCCTCCAAAGTTTTGTCTTTAGACTCCATAGATAATTTTTGATTGCTGAATATGGATAGGAAAAGTTGCATATTAGGAATTCATTTATATTTTTTTTTGAAATGGAAACAAAACTTTTTCATTGATATAATGAAAAGAGCCAAAAGCTCAGAGTACAATGAAACAAATAGAGAAAGAATACAACATAGAAATCGGAATAACAAAAATGAAAAGACTAATCCTTAGAATCAAAAGAAACTGAAATACAAGCATCCAAAGAACAAAAAATCCAAAACGAACAAAACAACTGGCGAAGAACGAAGCTTGAGCCAACAGAAACAAAGAACTTTGAAAGTAGATGAAAGGATGATGCTTGAAACTGAGAACATAATCAAAATGATTAGAAAGATGCCGACGCAGACGCCTCCCCTTAAACAATATAGGCCCTTCAAAAAGCACAACCAACCGGGCCCTCCAATCTGAATTTTCTGAAAGACGTGTTGAGACCACTCAAACTCGACTTTGAGCAGAGAAAAAAACGGATTTGTTTTGGAAGTCACGACCCTTAAAAGAAAGATTTCTCTTTCTTTATTTTCCTTGAAATGGTTTGAAGTGGGATTAGTGGAATTGTTGCAGTCTCTTATTAAGGACTTCTTTCAAAAGAAAGAGAAAAATGACTGTGAAGTGATTTGGTTAGCAAAATTTTGAAATCAGAGTGGCTGGTTTTTTGAGTGTGCGTTATGGCCAGCTACTGGTGGGAGGAATAATCTTCATGTTCCAGCTAGTTTTCATATTAGGGGAGCTTTTGGGCTTGCTTGGATCTGTATTTTCGGCTAGCTATTATTGTTATTATTATTTCTTCACTTGGAGATGATGAGAGTGCTAAGGAGTGGCTGGTTTTTTGAGTGTGCGTTATGGCCAGCTACTGGTGGGAGGAATAATCTTCATGTTCCAGCTAGTTTTCATATTAGGGGAGCTTTTGGGCTTGCTTGGATCTGTATTTTCGGCTAGCTATTATTGTTATTATTATTTCTTCACTTGGAGATGATGAGAGTGCTAAGGAGGTGTCGACATAGTTGAGATGTCCGGGTGCACTCACTGATTCTATATTTGTATTTCTAGTGATCTTTGTATCTATCTTTGTACTTTGAGCAATAGTCTCAATTCATTAATTCAATAAAGAGATTTGTTTCCTTTTTCAAAAAATATATAAGAGAGGTTGGCTAGTTTTTTGGGAGATGATCAAAGATTTTCTCGTAAATTTTGAAATCCTTTAGGTTTGACCTAGTTACAAGATTTTAGAGACATTTAGGTCTGATGCTGAGTTGAATGCTGCAAAAATGGTTAAGAGAAGTTATGTGGGTGTCATTTACAGAACCCTTCCCCTCCTTCAATTTTGATTCATCATCTTTAAACGCTACGGTTGTTGGGTTTGAAATTAAAAAATTTCCCATTTGGGTTTGAAAAGGAAAAAGAGGTGGTGGACTTACAACTTGATTCTGTTTTGGTGGTCACTGGATTGCTAGCACATTATTCATCAATGAAAGGTCTTGTTCTTTTAAAAAAAAATATAAAATAATAATTCTCGCACTCTCTTTTCATTACTCACGACAGAGGAGAGAGTGCTTTAAATCTAATCAAGAGTGGAAAGATGAAGAGTCTTTAGTTGGAATTAGCATATTGGCAATAGATGGAGTTATTACTTTGGAAGCCCGGTTGAAGAACCTGTCTCTTCTCACTTACTCAAAAATAGTCAATCCAACTCTTCACATCACTTGGAAGTGGAACAATCAGGTATGCTTATTCTCTCAGGCGTCAAAGTTGGAAAAGATAAAAAGTTTATTCCAGCCCTTCCACTTCATTACTCAAGAAAAGGATCTTCTCATCATTTCTCTAAATTTCAAGAGATCAATAACGATTCAATCAAAGTTGGTTGCGTTTGTGCGTAGGTTTCGGACATAAAAGCAAATCAGCCTTCATTCAACCCCTCAAAATTGCTTCACCTCTCTCAGAGATTCAGGCTAAGAAGCACAGATACAGATACGAGACACAGACACGGACACGACACCAGCACGACAACACGTCATTTTTAAAAATTTAGGACACAACATGAAATGACACATTTGTTAAAATATATATCATTTTTATACCAGAAAAAAATTCAAAGTAAATGGATTGATGAATTTATATGCTTCAAAAATTAGTTTGATGTATTTCACACTCAAATTATTGTCATATATGTGTCTCTGTAGTCTACTCAACAAGTGTTTAGTGCATGTCTTAACACATCTATAGGCTCAAGCTTCATTCCAAGGATTTCTCTTGGCTCAAGCTTCATTCCAAGGATTAGTCTTTTCATTTTTTGATTCGTTGTTCTTTGGGCGCTTGAATTTTAGTTTCTTTTGATTCCAAGGTTTCCAAGGATTAGTCTTTTTATTTTTGTTCTTTTTATTCTAATTTCTATGTTGTATTCTCTCTCTCTCTCTTTTTTTTTGTTTCTTTGTACTTTGAGCTTTTGGCTCTTTTCACTATATCAATGAAAAAGTCTTATTTCCGTTTCAAAAAAAAAAAAAAAAAACAAGTGTCCGATGTGTGGTCAATAAGTGCTGGAGTGTCCAAGTGTCCGACACGTGTAATACACGGACATGCTAGCCAAACTAAAGTGTCTGTGCTTCTTAGGATTCAGGCATTTGACTATTCTTTACTAAATCCATTTGTTAAGTTTGTTCGTGCTACTATTGAGTTTGATGATGATTCAATTGTTAGTGTGAGCAGCAAGGAAGAAGAATTTCATTGTTTGTTTTCAGAAACAAAAGCACTGTTTTCAGAAGAGCAATATGGGGAAGCTTTGGAGAATTTATTACAAAAATCAGTTGAAAGAATTGTTGTTCATACGCCAAAACTATGCTTTTCTCCCGTCTCCTTCTCAAATTCCATCTAATCTTTGCTCCATAGTTGAAGCTTGTGAACTCCAGTTGTGTAAAGTCTCTCCCCTGTTGACTCCTTCAGTGAACTGAATTTTTTTGGTTTTGTAATCATGATTCTCATCTTCTCTTGAGGGCTAGGAGTCATTTCCAAGCATGTTGTTTTGACAAGTTCCTGTAAAATAGGAACCAGGGTTTTAATGTTTTTTCTGAGAAAATTGGTTTGGTGGGATGCTTCTTCTTGTCTTGTGGTAGAAGTCCTATGTTGTTTATAGCGAGCATTTTGGTTGCAGGATCAAGCTTTTGGTAGTTATTGGAGGCCTTGGTTTTGTTGGGTTGGATTAAATATTTTGGCTTTTTTTTTTTTTTTTTTGCTAAGTGGCAAAAAGCATCCATGCATATATATATATTTTTTAACCAGAAACAAGCCTCTTCATTAAGATAATGAAATGAGACTAATGCTCAAAATACAAAGAGATACTCAAAAAATGGATCAGTGGGTGCACCTGGACATCTCAACTATGTTGACACCCTCTTAGCACCTTCATCAATTCCCAAAGATTACAATACTCGAAACATCCAAAATATCTAAAGTTCTACGGACCAAAAACTACAGCTCAGAACTCAATCCCAAAAAATCCAGCAGTTTCAAAGGGATACCCAGTCTAATCACAACCAAAAAATATACTAAAACCGAGTTGAAACTAAAAATAACAGATTTGTGACAACAGGCTATCCATCTTGGCAAATGAAGGCATGCCAATTTAAGCTTATTTCTTGAATGGAATAATCTGCAAATGCTTTGGAAAGGGACCACCATGAAGAGGCATTTAGTCTTGCAGCCTCGAGATGCGAAATCCATGGAGTTTCTTTGTCATGAAACACTCGTTGATTTCTTTCGAACCATAAATCAGCAAGCAAAGCCTTTACAGCATTGTTCCAAAGAAGCTGTGAAGTTGAATTCAACTTTGGCCCTACTAGAACCTGCAAAACATTATCCCTGAAAGCATTTTCAAACACCCATCTTATATTAAAACAATTAAATAAATATTACCAACATTGCACAGCATAACAACAATAAAAAAAGAGGTGCTGTTGATCCTCCCCAGCAGCCCTGCATAAAAAACACATGTTAGGAGATAAAAAATTAAAGGGCAGTTTCCTTTGCAATACTGAAGAGCAGTTTAGAAGCCCAAAAAGCATGATCCAAATTGTTATATGAACCCTCCGAGGGCTCTTGGTTTTCCACAGAGCTTTCTTCAAGTGCTTATCTAAAGTGGAGGCCAAAGAGAGATGATTAACAAGGGATTTGACCGTGAATACTCCTTTAGAATCAATTGACCATATACGTTTGTCAGGACAATCCCTTACTGCGATGTTGGAGATGCAACTTAACAATCTCTGAAAATCACTGATTTCTACCTCTTTTAGAAGTCTTCGAGATATGATATTCCAAGAGGAGGTGGAAGGATCCCAGTACTCCATAACCGAACCAGAGGGGAAGCTTGCAATTCTAAATAAATTTGGGAAACTGACCTTCAATGATATATTATCAACTCAAGAGTCTAGCCAGAATGCCACTCTACTTCCATTTCCAATCTTGAAAAATGCCAAAGTTTCCACTTTTAGCCAAGATCTTGAAATGCTAATCCAAGGACTGCGAAGGCTATGACTGACTTTTCCTGCAGTATGCCAATTGAACATGTCTCTCCCATGGAAAAAAAAGCATCCATGCATATTGATTTCACAAGAGAGTAAAATAGTGGTCATTCGCCATTTTCTGTGTTGCTGGAGTTTGATAGCATTCAAGACTGTTTTCCGTTAATTCTTCCTTCAATATTTTGGTTGCCTCTTATCCAAAGGATATACTTCTCTATTAAGACTTGTGGAAGCTTCCATCTCACTGTTTGTCTCCCTCATTTTGTTCTCATTGATCGGCAGTTATTGAAGGGATTTAATATCATTTCCTTGAGTGCTGCTTTCCCAAAGTTCCAATGATTTTTTTAAGTCAAGCATTGGCCTTAGCTTGATCGTTTTGAAGTTGCTAGAGTTAAAGATTCTTCTTGGTGTTCTCTCTCCAATCTATTTGTAGAATTTTCTATGTCTTGTGCTTATCCGGGATTATATTTATTTTTTCAGTTTAATTATCTTGTATTGTTCTATGTATTTCTCTAAGAGTACTTGGAAAATTCTTGTTTTGTTTCGTTTCCTTGTATTTTGAGCATTAGCCTCTTTTCATTTATTTAATGAAAAGTCTTGTTTTACTTTAAAAAAAAAATAATATAAAATTATATCAAGTTTTAGTATAGTAGATTGAGTGTTGAGTGTCGTCTTCAGGATTGGTTTTCTAGTTTGATTGAGTATCGTAGTTATTAACACTTTATTTTATCTAGAGAACCTAAAGATGGAGGTGAAATAATCTAAACTAATCCTAAAATCAACTGTGAGACCTTCTATTAAGCATACATATGATAGTGTAGCTTCAACCCAAAGAACTACAAAAGAAACAATGTGCAAAGTAACATTCTCAAAGGCCTTAACCCACTTTACTCAGTTAAAGACCTCAAGCTTCCACTATTGGAGAAAATTTGGATGGTTTTTGAGAAGGAGACCAGGAGCACTCAACCTTGTATCCTGAACACATTAATTTTCCTCGACCCTTTCAAATTAAGAACTCAATTAAGAAAAATCCCTACAGAAAAAATACAAAGTAAAGGAGTAAGAGAAAACACTATTCTTTCACGATAAATCACTAGCTTGGATGGTCCGTTTTGATGTTACTCGAATTAATACTTCTTCTTGGTCCACACTTTCCAAGTTTTTTTGCGGATTTTTCCATTCAAGACCTATGCTTAAATTGGAATGCCATTATTTTTCCAGCTTAATGCTTATGTTGTTTTTGTGTTTGCACTTTCATTGAACTTCTTGATTTTATATTTTCCTTTGGTTTCCTTGTGTTTTTTTATCTTGTATTTTGAGCATTAGTCTTTTTTCATTTCTTCAATGAAAAGAGTCGTTTTCATTTAAAAAAAAAACCTCATTCCCGTTGTGATATGACGCGATCCTGAGCCTCAAATATCTTTCTTGGCCCAAAGTATGTCTCCTAAACCCTCTAAACTGAGCAAAAATCGAAATTGGACCTTTTCCCCTCTAAATGGCCTCCCAAAAATCAGCCAAAAACTAAGGATTTATAGGTAGTTGCAATGTTGAGACATTAGAGGCTGCGTCTCAACATTTTTGCATGAATTTACAAGAATACCCCTTAGAAAACACGTGCACATCTTCCTTGATTTTTGTCAAAATCCTAGCATCTTGACGTTACCTCCTTGATTTTTATGGCTTGGTTGCATGCGTTTGTGGTGTTGAGACGCTATGGATAGCGTCTCGACATTGTCACTTTGGGATTTCTTGATTTAGCACTCCTTGGTATGACTCTAGTGCTCCAAATTACTTCTTTTGGCTCCAATTACTCCTAGTTTCTTGTCCGAATAATTGTTTTGGCCGAATTTCTCGAAACCTTTAAATAATAAGATAAACACATGGAAGTACTGAAAATTTTCCACCATTAACAATAACTTAAGCCTAGGGATAATATATTTTGTGTGGTATCAAATACCTACAAACTTAACCTTTTGCTAGAGAACAACAAGGGCCCCTAATCTGTGACAATAAACTTCAACTAATGCTCATGAAATCGAATCCTTCAAATGTCTAATACGTGCTTGAGTGTTTGGTACCTCTTTGGCATGGTCGCATAACTAAAGCATTCATGCCCCAAAGCTTGTAACTTCATCCCAATTATTTTCCCCTTCTTATGCTAATTACGTAATTTCCTTGACTACTATTACTAGTTTTAGCGTGTGAAGGGTCAGAATTGAAGGGTTACATGAAAAAGCAAACAACAAGCAAGTCTATAAAGAAACACATGCAAAATGGGGGAATAAATAGCTTCAACTTTCATGCTAGCTCTAGAATGGTGAGATCATTTGACAGAAGTCTATCACAATAGAGTATTTTTTTCTTATGCTATTGATTCTTTTCCATTATTTAGATTCCACATACTATCAAATCAGAAGTCCAGTTTGTTAAGCTGTCTATCAAACAATTTGTTCGTCCTGGAAAGAAAGTGAAAGATGATCATGCTGTTCAGATAACATCATTTAAGAACAAGCTAACTGATACTGAGACTGAGTTACTTCTCAAGTATTTCCATTCTTGTGAAGACGCATGGAGGCCGTCCCTTATTGCCTTTCCTCACTTCCAGACTTTTCCCTCAAGAACCCATGGAGTAATGCATTCATGTAGAACAATGGTTCTAATTGACACAATGCAACAGTTGCAAGGACTGCATTTCTCTGTTCAGGTTTGTTTTTAAGTTCTGTTCTACATTTTTTCTCCTTAAAAGAAATTGCTCTCTAGTACTTGGCTTATCATACAGCGTGGTTGGATTCAGGAGAAACCATGCATTAGAGAACTATTCGAAGCAGGGCAGGTTGAAAAGTGTAGCGGCAAAGGAGGTAAATGTTCAATTGGTACATTATAGATCATATATTTATAATATTTTCAATGTCTGTATAAGGGATGCAGGACATTTTCGATTTCTTTCTGTTTCCATTACCCTGCATAATTGCAAATAGTTGTTTTTATAGAACCAGAAACAAATCCTTTCATTGATGCAATGAAAAGTGTTGAGTTATGAGTTTTTCCTTTTTTACATCTATTTCTTTTTTATTTTATTTTGTAAAAGAAGGATACGCAACTTTTCATTAAAATGATGACAAGAGATTAGTACTCTTAAATACAAAAGGAGCTTACAAGAGACTAATGCTCGGAGATAAAAAAGTACTAAAAATGAAAGAAAATGCTTAGAGCATCGACAAAACTTAAAAGGAAAACATAATTATGAAGGTAATTTTGTCCGGAGTACCATTCAAAGAACCCAGTTGTTTTTAATGTGTAATTTAGTAGTATTGATTAGGTCCATTTTTGTACCTTTATAATCATGAACTTCCATGTAACGTTTGTAGTGCAAAACTAATTTCTTGGACACAAACTTGGAGAATTCTTGAAGAACTCTATTATTACCCTTAGAACTGTAA

mRNA sequence

GAAGTATTGGTCGACCATTTTAGTAGAAACTAAGGATCCACAAGATTCAAGGGTGATCATATTCTCAAATTTCAGGGGAAGTGTAAGGGACATTATGGGTGCACTATCCAAGATTGAAGACATTGTCAGAGCTACTGAGTTTATTGGTCAAAGCTCAGGAAAATCTCTCAAAGGTCAATCACAAAAGGTTCAACAAGCTGTTTTGGAGAAATTTCGTGCTGGCGGGTACAATGTCATTGTTGCCACATGCATTGGGGAAGAAGGTCTTGATATAATGGAAGTTGATCTTGTCATCTGTTTTGATGCAAACGTTTCACCAATAAGAATGATTCAGCGGATGGGTAGAACTGGAAGGAAGCATGATGGACGAGTGGTAGTTTTAGCGTGTGAAGGGTCAGAATTGAAGGGTTACATGAAAAAGCAAACAACAAGCAAGTCTATAAAGAAACACATGCAAAATGGGGGAATAAATAGCTTCAACTTTCATGCTAGCTCTAGAATGATTCCACATACTATCAAATCAGAAGTCCAGTTTGTTAAGCTGTCTATCAAACAATTTGTTCGTCCTGGAAAGAAAGTGAAAGATGATCATGCTGTTCAGATAACATCATTTAAGAACAAGCTAACTGATACTGAGACTGAGTTACTTCTCAAGTATTTCCATTCTTGTGAAGACGCATGGAGGCCGTCCCTTATTGCCTTTCCTCACTTCCAGACTTTTCCCTCAAGAACCCATGGAGTAATGCATTCATGTAGAACAATGGTTCTAATTGACACAATGCAACAGTTGCAAGGACTGCATTTCTCTGTTCAGCGTGGTTGGATTCAGGAGAAACCATGCATTAGAGAACTATTCGAAGCAGGGCAGGTTGAAAAGTGTAGCGGCAAAGGAGAACTGTAA

Coding sequence (CDS)

ATGGGTGCACTATCCAAGATTGAAGACATTGTCAGAGCTACTGAGTTTATTGGTCAAAGCTCAGGAAAATCTCTCAAAGGTCAATCACAAAAGGTTCAACAAGCTGTTTTGGAGAAATTTCGTGCTGGCGGGTACAATGTCATTGTTGCCACATGCATTGGGGAAGAAGGTCTTGATATAATGGAAGTTGATCTTGTCATCTGTTTTGATGCAAACGTTTCACCAATAAGAATGATTCAGCGGATGGGTAGAACTGGAAGGAAGCATGATGGACGAGTGGTAGTTTTAGCGTGTGAAGGGTCAGAATTGAAGGGTTACATGAAAAAGCAAACAACAAGCAAGTCTATAAAGAAACACATGCAAAATGGGGGAATAAATAGCTTCAACTTTCATGCTAGCTCTAGAATGATTCCACATACTATCAAATCAGAAGTCCAGTTTGTTAAGCTGTCTATCAAACAATTTGTTCGTCCTGGAAAGAAAGTGAAAGATGATCATGCTGTTCAGATAACATCATTTAAGAACAAGCTAACTGATACTGAGACTGAGTTACTTCTCAAGTATTTCCATTCTTGTGAAGACGCATGGAGGCCGTCCCTTATTGCCTTTCCTCACTTCCAGACTTTTCCCTCAAGAACCCATGGAGTAATGCATTCATGTAGAACAATGGTTCTAATTGACACAATGCAACAGTTGCAAGGACTGCATTTCTCTGTTCAGCGTGGTTGGATTCAGGAGAAACCATGCATTAGAGAACTATTCGAAGCAGGGCAGGTTGAAAAGTGTAGCGGCAAAGGAGAACTGTAA

Protein sequence

MGALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDIMEVDLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHMQNGGINSFNFHASSRMIPHTIKSEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDTETELLLKYFHSCEDAWRPSLIAFPHFQTFPSRTHGVMHSCRTMVLIDTMQQLQGLHFSVQRGWIQEKPCIRELFEAGQVEKCSGKGEL

Homology

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BLAST of Lsi11G010040 vs. ExPASy Swiss-Prot
Match: I3XHK1 (DEAD-box ATP-dependent RNA helicase FANCM OS=Arabidopsis thaliana OX=3702 GN=FANCM PE=2 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 8.8e-89
Identity = 168/241 (69.71%), Postives = 198/241 (82.16%), Query Frame = 0


Query: 1   MGALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 60
           M ALS I D+V+ATEFIGQSSGK+LKGQSQK+QQAVLEKFRAGG+NVIVAT IGEEGLDI
Sbjct: 486 MNALSNIGDMVKATEFIGQSSGKTLKGQSQKIQQAVLEKFRAGGFNVIVATSIGEEGLDI 545

Query: 61  MEVDLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM 120
           MEVDLVICFDANVSP+RMIQRMGRTGRK++GRVVVLACEGSE   YM+KQ + ++IKKHM
Sbjct: 546 MEVDLVICFDANVSPLRMIQRMGRTGRKNNGRVVVLACEGSEKNSYMRKQASGRAIKKHM 605

Query: 121 QNGGINSFNFHASSRMIPHTIKSEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT 180
           +NGG NSFNFH S RMIPH  K EVQ V+ SIKQFV  GKK+++++A +  +F+ KLT  
Sbjct: 606 RNGGTNSFNFHPSPRMIPHVYKPEVQHVEFSIKQFVPRGKKLQEEYATETPAFQKKLTPA 665

Query: 181 ETELLLKYFHS-CEDAWRPSLIAFPHFQTFPSRTHGVMHSCRTMVLIDTMQQLQGLHFSV 240
           ET +L KY+++  E+  R SLIAFPHFQT PS+ H VMHS +T +LID MQ LQ   FS 
Sbjct: 666 ETHMLAKYYNNPDEEKLRVSLIAFPHFQTLPSKVHKVMHSRQTGMLIDAMQHLQEPTFSE 725

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BLAST of Lsi11G010040 vs. ExPASy Swiss-Prot
Match: A0A1D5PRR9 (Fanconi anemia group M protein OS=Gallus gallus OX=9031 GN=FANCM PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.6e-34
Identity = 75/152 (49.34%), Postives = 105/152 (69.08%), Query Frame = 0


Query: 4   LSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDIMEV 63
           LS+   +VR   F+G S+GKS KG +QK Q  V+++FR GGYN +V+TC+GEEGLDI EV
Sbjct: 495 LSRFSPVVRVMTFVGHSTGKSTKGFTQKEQLEVVKRFREGGYNTLVSTCVGEEGLDIGEV 554

Query: 64  DLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHMQNG 123
           DL+ICFDA  SPIR++QRMGRTGR+  GRVVV+  EG E + Y + Q+  +SI+K +   
Sbjct: 555 DLIICFDAQKSPIRLVQRMGRTGRQRQGRVVVILAEGREERTYNQSQSNRRSIQKAISGN 614

Query: 124 GINSFNFHASSRMIPHTIKSEVQFVKLSIKQF 156
            +  F  H S RMIP  I  E+  + ++ +++
Sbjct: 615 KMLHFYQH-SPRMIPEGINPELHRMFITAEKY 645

[Close]

BLAST of Lsi11G010040 vs. ExPASy Swiss-Prot
Match: Q8IYD8 (Fanconi anemia group M protein OS=Homo sapiens OX=9606 GN=FANCM PE=1 SV=2)

HSP 1 Score: 140.2 bits (352), Expect = 3.4e-32
Identity = 72/162 (44.44%), Postives = 106/162 (65.43%), Query Frame = 0


Query: 4   LSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDIMEV 63
           LS+ + I+R   F+G +SGKS KG +QK Q  V+++FR GGYN +V+TC+GEEGLDI EV
Sbjct: 496 LSQHQPIIRVMTFVGHASGKSTKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEV 555

Query: 64  DLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHMQNG 123
           DL+ICFD+  SPIR++QRMGRTGRK  GR+V++  EG E + Y + Q+  +SI K + + 
Sbjct: 556 DLIICFDSQKSPIRLVQRMGRTGRKRQGRIVIILSEGREERIYNQSQSNKRSIYKAISSN 615

Query: 124 GINSFNFHASSRMIPHTI--KSEVQFVKLSIKQFVRPGKKVK 164
                 +  S RM+P  I  K    F+   + +  +P + ++
Sbjct: 616 RQVLHFYQRSPRMVPDGINPKLHKMFITHGVYEPEKPSRNLQ 657

[Close]

BLAST of Lsi11G010040 vs. ExPASy Swiss-Prot
Match: Q8BGE5 (Fanconi anemia group M protein homolog OS=Mus musculus OX=10090 GN=Fancm PE=1 SV=3)

HSP 1 Score: 139.8 bits (351), Expect = 4.5e-32
Identity = 69/136 (50.74%), Postives = 92/136 (67.65%), Query Frame = 0


Query: 10  IVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDIMEVDLVICF 69
           ++R   F+G +SGK+ KG +QK Q  V+ +FR GGYN +V+TC+GEEGLDI EVDL+ICF
Sbjct: 487 VIRVMTFVGHASGKNTKGFTQKEQLQVVRQFRDGGYNTLVSTCVGEEGLDIGEVDLIICF 546

Query: 70  DANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHMQNGGINSFN 129
           DA  SPIR+IQRMGRTGRK  GR+VV+  EG E + Y + Q+  K+I K +         
Sbjct: 547 DAQKSPIRLIQRMGRTGRKRQGRIVVILAEGREERTYNQSQSNKKNIYKAISGNRQVLRL 606

Query: 130 FHASSRMIPHTIKSEV 146
           +  S RM+P  I  E+
Sbjct: 607 YQGSPRMVPDKINPEL 622

[Close]

BLAST of Lsi11G010040 vs. ExPASy Swiss-Prot
Match: A7EFH4 (ATP-dependent DNA helicase mph1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=mph1 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.7e-31
Identity = 70/157 (44.59%), Postives = 105/157 (66.88%), Query Frame = 0


Query: 4   LSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDIMEV 63
           L+K   ++RA+ F+GQS  K  +G +Q+ Q   + KF+AGG NVIVAT IGEEGLDI EV
Sbjct: 656 LNKHGPMIRASVFVGQSDSKRSEGMNQEKQLETIRKFKAGGINVIVATSIGEEGLDIGEV 715

Query: 64  DLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHMQNG 123
           DL++C+D++ SPIRM+QRMGRTGRK  G++V+L   G E   Y K +   + I++ + +G
Sbjct: 716 DLIVCYDSSSSPIRMLQRMGRTGRKRAGKIVLLLMRGKEEDSYKKSKDNYEQIQRMISSG 775

Query: 124 GINSFNFHASSRMIPHTIKSEV--QFVKLSIKQFVRP 159
              +F    S+R+IP  +K EV  +F+++ ++    P
Sbjct: 776 SRFTFRHDLSARIIPRKVKPEVDKRFIEIPLENTQDP 812

[Close]

BLAST of Lsi11G010040 vs. ExPASy TrEMBL
Match: A0A6J1JS97 (DEAD-box ATP-dependent RNA helicase FANCM isoform X6 OS=Cucurbita maxima OX=3661 GN=LOC111489325 PE=3 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 3.0e-132
Identity = 240/266 (90.23%), Postives = 251/266 (94.36%), Query Frame = 0


Query: 1   MGALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 60
           MGAL+KIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI
Sbjct: 419 MGALAKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 478

Query: 61  MEVDLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM 120
           MEVDLVICFDAN+SPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYM+KQTTSKSIKKHM
Sbjct: 479 MEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMRKQTTSKSIKKHM 538

Query: 121 QNGGINSFNFHASSRMIPHTIKSEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT 180
           QNGGINSFNFHAS RMIPHTIK EVQFVKLSIKQFVRPGKKVKDDHAVQITSFKN+LT+T
Sbjct: 539 QNGGINSFNFHASPRMIPHTIKPEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNQLTNT 598

Query: 181 ETELLLKYFHSCEDAWRPSLIAFPHFQTFPSRTHGVMHSCRTMVLIDTMQQLQGLHFS-- 240
           ETELLLKYFH CEDAW+PSLIAFPHFQTFPSRTHGV HS RTM+LIDTMQ LQGL+FS  
Sbjct: 599 ETELLLKYFHPCEDAWKPSLIAFPHFQTFPSRTHGVRHSSRTMILIDTMQHLQGLYFSRD 658

Query: 241 VQRGWIQEKPCIRELFEAGQVEKCSG 265
            +   +QEKPCIRELFEA Q+ KC G
Sbjct: 659 SEAFSVQEKPCIRELFEASQIGKCYG 684

[Close]

BLAST of Lsi11G010040 vs. ExPASy TrEMBL
Match: A0A6J1K1N4 (DEAD-box ATP-dependent RNA helicase FANCM isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489325 PE=3 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 3.0e-132
Identity = 240/266 (90.23%), Postives = 251/266 (94.36%), Query Frame = 0


Query: 1   MGALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 60
           MGAL+KIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI
Sbjct: 499 MGALAKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 558

Query: 61  MEVDLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM 120
           MEVDLVICFDAN+SPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYM+KQTTSKSIKKHM
Sbjct: 559 MEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMRKQTTSKSIKKHM 618

Query: 121 QNGGINSFNFHASSRMIPHTIKSEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT 180
           QNGGINSFNFHAS RMIPHTIK EVQFVKLSIKQFVRPGKKVKDDHAVQITSFKN+LT+T
Sbjct: 619 QNGGINSFNFHASPRMIPHTIKPEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNQLTNT 678

Query: 181 ETELLLKYFHSCEDAWRPSLIAFPHFQTFPSRTHGVMHSCRTMVLIDTMQQLQGLHFS-- 240
           ETELLLKYFH CEDAW+PSLIAFPHFQTFPSRTHGV HS RTM+LIDTMQ LQGL+FS  
Sbjct: 679 ETELLLKYFHPCEDAWKPSLIAFPHFQTFPSRTHGVRHSSRTMILIDTMQHLQGLYFSRD 738

Query: 241 VQRGWIQEKPCIRELFEAGQVEKCSG 265
            +   +QEKPCIRELFEA Q+ KC G
Sbjct: 739 SEAFSVQEKPCIRELFEASQIGKCYG 764

[Close]

BLAST of Lsi11G010040 vs. ExPASy TrEMBL
Match: A0A6J1K1P1 (DEAD-box ATP-dependent RNA helicase FANCM isoform X7 OS=Cucurbita maxima OX=3661 GN=LOC111489325 PE=3 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 3.0e-132
Identity = 240/266 (90.23%), Postives = 251/266 (94.36%), Query Frame = 0


Query: 1   MGALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 60
           MGAL+KIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI
Sbjct: 214 MGALAKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 273

Query: 61  MEVDLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM 120
           MEVDLVICFDAN+SPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYM+KQTTSKSIKKHM
Sbjct: 274 MEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMRKQTTSKSIKKHM 333

Query: 121 QNGGINSFNFHASSRMIPHTIKSEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT 180
           QNGGINSFNFHAS RMIPHTIK EVQFVKLSIKQFVRPGKKVKDDHAVQITSFKN+LT+T
Sbjct: 334 QNGGINSFNFHASPRMIPHTIKPEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNQLTNT 393

Query: 181 ETELLLKYFHSCEDAWRPSLIAFPHFQTFPSRTHGVMHSCRTMVLIDTMQQLQGLHFS-- 240
           ETELLLKYFH CEDAW+PSLIAFPHFQTFPSRTHGV HS RTM+LIDTMQ LQGL+FS  
Sbjct: 394 ETELLLKYFHPCEDAWKPSLIAFPHFQTFPSRTHGVRHSSRTMILIDTMQHLQGLYFSRD 453

Query: 241 VQRGWIQEKPCIRELFEAGQVEKCSG 265
            +   +QEKPCIRELFEA Q+ KC G
Sbjct: 454 SEAFSVQEKPCIRELFEASQIGKCYG 479

[Close]

BLAST of Lsi11G010040 vs. ExPASy TrEMBL
Match: A0A6J1JVT6 (DEAD-box ATP-dependent RNA helicase FANCM isoform X5 OS=Cucurbita maxima OX=3661 GN=LOC111489325 PE=3 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 3.0e-132
Identity = 240/266 (90.23%), Postives = 251/266 (94.36%), Query Frame = 0


Query: 1   MGALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 60
           MGAL+KIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI
Sbjct: 228 MGALAKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 287

Query: 61  MEVDLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM 120
           MEVDLVICFDAN+SPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYM+KQTTSKSIKKHM
Sbjct: 288 MEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMRKQTTSKSIKKHM 347

Query: 121 QNGGINSFNFHASSRMIPHTIKSEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT 180
           QNGGINSFNFHAS RMIPHTIK EVQFVKLSIKQFVRPGKKVKDDHAVQITSFKN+LT+T
Sbjct: 348 QNGGINSFNFHASPRMIPHTIKPEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNQLTNT 407

Query: 181 ETELLLKYFHSCEDAWRPSLIAFPHFQTFPSRTHGVMHSCRTMVLIDTMQQLQGLHFS-- 240
           ETELLLKYFH CEDAW+PSLIAFPHFQTFPSRTHGV HS RTM+LIDTMQ LQGL+FS  
Sbjct: 408 ETELLLKYFHPCEDAWKPSLIAFPHFQTFPSRTHGVRHSSRTMILIDTMQHLQGLYFSRD 467

Query: 241 VQRGWIQEKPCIRELFEAGQVEKCSG 265
            +   +QEKPCIRELFEA Q+ KC G
Sbjct: 468 SEAFSVQEKPCIRELFEASQIGKCYG 493

[Close]

BLAST of Lsi11G010040 vs. ExPASy TrEMBL
Match: A0A6J1JS92 (DEAD-box ATP-dependent RNA helicase FANCM isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489325 PE=3 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 3.0e-132
Identity = 240/266 (90.23%), Postives = 251/266 (94.36%), Query Frame = 0


Query: 1   MGALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 60
           MGAL+KIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI
Sbjct: 499 MGALAKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 558

Query: 61  MEVDLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM 120
           MEVDLVICFDAN+SPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYM+KQTTSKSIKKHM
Sbjct: 559 MEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMRKQTTSKSIKKHM 618

Query: 121 QNGGINSFNFHASSRMIPHTIKSEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT 180
           QNGGINSFNFHAS RMIPHTIK EVQFVKLSIKQFVRPGKKVKDDHAVQITSFKN+LT+T
Sbjct: 619 QNGGINSFNFHASPRMIPHTIKPEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNQLTNT 678

Query: 181 ETELLLKYFHSCEDAWRPSLIAFPHFQTFPSRTHGVMHSCRTMVLIDTMQQLQGLHFS-- 240
           ETELLLKYFH CEDAW+PSLIAFPHFQTFPSRTHGV HS RTM+LIDTMQ LQGL+FS  
Sbjct: 679 ETELLLKYFHPCEDAWKPSLIAFPHFQTFPSRTHGVRHSSRTMILIDTMQHLQGLYFSRD 738

Query: 241 VQRGWIQEKPCIRELFEAGQVEKCSG 265
            +   +QEKPCIRELFEA Q+ KC G
Sbjct: 739 SEAFSVQEKPCIRELFEASQIGKCYG 764

[Close]

BLAST of Lsi11G010040 vs. NCBI nr
Match: XP_038884540.1 (DEAD-box ATP-dependent RNA helicase FANCM isoform X6 [Benincasa hispida])

HSP 1 Score: 498.0 bits (1281), Expect = 4.9e-137
Identity = 251/272 (92.28%), Postives = 255/272 (93.75%), Query Frame = 0


Query: 1   MGALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 60
           M ALSKIEDI+RATEFIGQSSGK LKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI
Sbjct: 352 MSALSKIEDIIRATEFIGQSSGKFLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 411

Query: 61  MEVDLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM 120
           MEVDLVICFDAN+SPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM
Sbjct: 412 MEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM 471

Query: 121 QNGGINSFNFHASSRMIPHTIKSEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT 180
           QNGGINSFNFHASSRMIPHTIK EVQFVKLSIKQFVRPGKKVKDD AVQITSF++KLTDT
Sbjct: 472 QNGGINSFNFHASSRMIPHTIKPEVQFVKLSIKQFVRPGKKVKDDLAVQITSFESKLTDT 531

Query: 181 ETELLLKYFHSCEDAWRPSLIAFPHFQTFPSRTHGVMHSCRTMVLIDTMQQLQGLH---- 240
           ETELLLKYFH CEDAWRPSLIAFPHFQTFPSR HGVMHSCRTMVLIDTMQ LQ LH    
Sbjct: 532 ETELLLKYFHPCEDAWRPSLIAFPHFQTFPSRAHGVMHSCRTMVLIDTMQHLQRLHFSRE 591

Query: 241 ---FSVQRGWIQEKPCIRELFEAGQVEKCSGK 266
              FSVQRGWIQEK CIRELFEAGQVEKCS K
Sbjct: 592 PESFSVQRGWIQEKSCIRELFEAGQVEKCSSK 623

[Close]

BLAST of Lsi11G010040 vs. NCBI nr
Match: XP_038884541.1 (DEAD-box ATP-dependent RNA helicase FANCM isoform X7 [Benincasa hispida])

HSP 1 Score: 498.0 bits (1281), Expect = 4.9e-137
Identity = 251/272 (92.28%), Postives = 255/272 (93.75%), Query Frame = 0


Query: 1   MGALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 60
           M ALSKIEDI+RATEFIGQSSGK LKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI
Sbjct: 352 MSALSKIEDIIRATEFIGQSSGKFLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 411

Query: 61  MEVDLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM 120
           MEVDLVICFDAN+SPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM
Sbjct: 412 MEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM 471

Query: 121 QNGGINSFNFHASSRMIPHTIKSEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT 180
           QNGGINSFNFHASSRMIPHTIK EVQFVKLSIKQFVRPGKKVKDD AVQITSF++KLTDT
Sbjct: 472 QNGGINSFNFHASSRMIPHTIKPEVQFVKLSIKQFVRPGKKVKDDLAVQITSFESKLTDT 531

Query: 181 ETELLLKYFHSCEDAWRPSLIAFPHFQTFPSRTHGVMHSCRTMVLIDTMQQLQGLH---- 240
           ETELLLKYFH CEDAWRPSLIAFPHFQTFPSR HGVMHSCRTMVLIDTMQ LQ LH    
Sbjct: 532 ETELLLKYFHPCEDAWRPSLIAFPHFQTFPSRAHGVMHSCRTMVLIDTMQHLQRLHFSRE 591

Query: 241 ---FSVQRGWIQEKPCIRELFEAGQVEKCSGK 266
              FSVQRGWIQEK CIRELFEAGQVEKCS K
Sbjct: 592 PESFSVQRGWIQEKSCIRELFEAGQVEKCSSK 623

[Close]

BLAST of Lsi11G010040 vs. NCBI nr
Match: XP_038884542.1 (DEAD-box ATP-dependent RNA helicase FANCM isoform X8 [Benincasa hispida])

HSP 1 Score: 498.0 bits (1281), Expect = 4.9e-137
Identity = 251/272 (92.28%), Postives = 255/272 (93.75%), Query Frame = 0


Query: 1   MGALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 60
           M ALSKIEDI+RATEFIGQSSGK LKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI
Sbjct: 350 MSALSKIEDIIRATEFIGQSSGKFLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 409

Query: 61  MEVDLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM 120
           MEVDLVICFDAN+SPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM
Sbjct: 410 MEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM 469

Query: 121 QNGGINSFNFHASSRMIPHTIKSEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT 180
           QNGGINSFNFHASSRMIPHTIK EVQFVKLSIKQFVRPGKKVKDD AVQITSF++KLTDT
Sbjct: 470 QNGGINSFNFHASSRMIPHTIKPEVQFVKLSIKQFVRPGKKVKDDLAVQITSFESKLTDT 529

Query: 181 ETELLLKYFHSCEDAWRPSLIAFPHFQTFPSRTHGVMHSCRTMVLIDTMQQLQGLH---- 240
           ETELLLKYFH CEDAWRPSLIAFPHFQTFPSR HGVMHSCRTMVLIDTMQ LQ LH    
Sbjct: 530 ETELLLKYFHPCEDAWRPSLIAFPHFQTFPSRAHGVMHSCRTMVLIDTMQHLQRLHFSRE 589

Query: 241 ---FSVQRGWIQEKPCIRELFEAGQVEKCSGK 266
              FSVQRGWIQEK CIRELFEAGQVEKCS K
Sbjct: 590 PESFSVQRGWIQEKSCIRELFEAGQVEKCSSK 621

[Close]

BLAST of Lsi11G010040 vs. NCBI nr
Match: XP_038884535.1 (DEAD-box ATP-dependent RNA helicase FANCM isoform X1 [Benincasa hispida])

HSP 1 Score: 498.0 bits (1281), Expect = 4.9e-137
Identity = 251/272 (92.28%), Postives = 255/272 (93.75%), Query Frame = 0


Query: 1   MGALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 60
           M ALSKIEDI+RATEFIGQSSGK LKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI
Sbjct: 670 MSALSKIEDIIRATEFIGQSSGKFLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 729

Query: 61  MEVDLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM 120
           MEVDLVICFDAN+SPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM
Sbjct: 730 MEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM 789

Query: 121 QNGGINSFNFHASSRMIPHTIKSEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT 180
           QNGGINSFNFHASSRMIPHTIK EVQFVKLSIKQFVRPGKKVKDD AVQITSF++KLTDT
Sbjct: 790 QNGGINSFNFHASSRMIPHTIKPEVQFVKLSIKQFVRPGKKVKDDLAVQITSFESKLTDT 849

Query: 181 ETELLLKYFHSCEDAWRPSLIAFPHFQTFPSRTHGVMHSCRTMVLIDTMQQLQGLH---- 240
           ETELLLKYFH CEDAWRPSLIAFPHFQTFPSR HGVMHSCRTMVLIDTMQ LQ LH    
Sbjct: 850 ETELLLKYFHPCEDAWRPSLIAFPHFQTFPSRAHGVMHSCRTMVLIDTMQHLQRLHFSRE 909

Query: 241 ---FSVQRGWIQEKPCIRELFEAGQVEKCSGK 266
              FSVQRGWIQEK CIRELFEAGQVEKCS K
Sbjct: 910 PESFSVQRGWIQEKSCIRELFEAGQVEKCSSK 941

[Close]

BLAST of Lsi11G010040 vs. NCBI nr
Match: XP_038884544.1 (DEAD-box ATP-dependent RNA helicase FANCM isoform X9 [Benincasa hispida])

HSP 1 Score: 498.0 bits (1281), Expect = 4.9e-137
Identity = 251/272 (92.28%), Postives = 255/272 (93.75%), Query Frame = 0


Query: 1   MGALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 60
           M ALSKIEDI+RATEFIGQSSGK LKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI
Sbjct: 299 MSALSKIEDIIRATEFIGQSSGKFLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 358

Query: 61  MEVDLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM 120
           MEVDLVICFDAN+SPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM
Sbjct: 359 MEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM 418

Query: 121 QNGGINSFNFHASSRMIPHTIKSEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT 180
           QNGGINSFNFHASSRMIPHTIK EVQFVKLSIKQFVRPGKKVKDD AVQITSF++KLTDT
Sbjct: 419 QNGGINSFNFHASSRMIPHTIKPEVQFVKLSIKQFVRPGKKVKDDLAVQITSFESKLTDT 478

Query: 181 ETELLLKYFHSCEDAWRPSLIAFPHFQTFPSRTHGVMHSCRTMVLIDTMQQLQGLH---- 240
           ETELLLKYFH CEDAWRPSLIAFPHFQTFPSR HGVMHSCRTMVLIDTMQ LQ LH    
Sbjct: 479 ETELLLKYFHPCEDAWRPSLIAFPHFQTFPSRAHGVMHSCRTMVLIDTMQHLQRLHFSRE 538

Query: 241 ---FSVQRGWIQEKPCIRELFEAGQVEKCSGK 266
              FSVQRGWIQEK CIRELFEAGQVEKCS K
Sbjct: 539 PESFSVQRGWIQEKSCIRELFEAGQVEKCSSK 570

[Close]

BLAST of Lsi11G010040 vs. TAIR 10
Match: AT1G35530.2 (DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 321.2 bits (822), Expect = 7.7e-88
Identity = 166/242 (68.60%), Postives = 198/242 (81.82%), Query Frame = 0


Query: 1   MGALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 60
           M ALS I D+V+ATEFIGQSSGK+LKGQSQK+QQAVLEKFRAGG+NVIVAT IGEEGLDI
Sbjct: 484 MNALSNIGDMVKATEFIGQSSGKTLKGQSQKIQQAVLEKFRAGGFNVIVATSIGEEGLDI 543

Query: 61  MEVDLVICFDANVSPIRMIQRMGRTGRKHDGR-VVVLACEGSELKGYMKKQTTSKSIKKH 120
           MEVDLVICFDANVSP+RMIQRMGRTGRK++GR ++VLACEGSE   YM+KQ + ++IKKH
Sbjct: 544 MEVDLVICFDANVSPLRMIQRMGRTGRKNNGRPLLVLACEGSEKNSYMRKQASGRAIKKH 603

Query: 121 MQNGGINSFNFHASSRMIPHTIKSEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTD 180
           M+NGG NSFNFH S RMIPH  K EVQ V+ SIKQFV  GKK+++++A +  +F+ KLT 
Sbjct: 604 MRNGGTNSFNFHPSPRMIPHVYKPEVQHVEFSIKQFVPRGKKLQEEYATETPAFQKKLTP 663

Query: 181 TETELLLKYFHS-CEDAWRPSLIAFPHFQTFPSRTHGVMHSCRTMVLIDTMQQLQGLHFS 240
            ET +L KY+++  E+  R SLIAFPHFQT PS+ H VMHS +T +LID MQ LQ   FS
Sbjct: 664 AETHMLAKYYNNPDEEKLRVSLIAFPHFQTLPSKVHKVMHSRQTGMLIDAMQHLQEPTFS 723

[Close]

BLAST of Lsi11G010040 vs. TAIR 10
Match: AT1G35530.1 (DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 243.8 bits (621), Expect = 1.6e-64
Identity = 137/241 (56.85%), Postives = 162/241 (67.22%), Query Frame = 0


Query: 1   MGALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 60
           M ALS I D+V+ATEFIGQSSGK+LKGQSQK+QQAVLEKFRAGG+NVIVAT IGEEGLDI
Sbjct: 484 MNALSNIGDMVKATEFIGQSSGKTLKGQSQKIQQAVLEKFRAGGFNVIVATSIGEEGLDI 543

Query: 61  MEVDLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM 120
           MEVDLVICFDANVSP+RMIQRMGRTGRK++GR                            
Sbjct: 544 MEVDLVICFDANVSPLRMIQRMGRTGRKNNGR---------------------------- 603

Query: 121 QNGGINSFNFHASSRMIPHTIKSEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT 180
                           IPH  K EVQ V+ SIKQFV  GKK+++++A +  +F+ KLT  
Sbjct: 604 ----------------IPHVYKPEVQHVEFSIKQFVPRGKKLQEEYATETPAFQKKLTPA 663

Query: 181 ETELLLKYFHS-CEDAWRPSLIAFPHFQTFPSRTHGVMHSCRTMVLIDTMQQLQGLHFSV 240
           ET +L KY+++  E+  R SLIAFPHFQT PS+ H VMHS +T +LID MQ LQ   FS 
Sbjct: 664 ETHMLAKYYNNPDEEKLRVSLIAFPHFQTLPSKVHKVMHSRQTGMLIDAMQHLQEPTFSE 680

[Close]

BLAST of Lsi11G010040 vs. TAIR 10
Match: AT3G03300.1 (dicer-like 2 )

HSP 1 Score: 52.8 bits (125), Expect = 5.1e-07
Identity = 31/67 (46.27%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 18  GQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDIMEVDLVICFDANVSPIR 77
           G +SG  L+ Q++K Q  ++E FR G  N+IVAT I EEGLD+   +LVI FD   +   
Sbjct: 424 GNNSG--LQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICS 483

Query: 78  MIQRMGR 85
            IQ  GR
Sbjct: 484 FIQSRGR 488

[Close]

BLAST of Lsi11G010040 vs. TAIR 10
Match: AT3G03300.2 (dicer-like 2 )

HSP 1 Score: 52.8 bits (125), Expect = 5.1e-07
Identity = 31/67 (46.27%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 18  GQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDIMEVDLVICFDANVSPIR 77
           G +SG  L+ Q++K Q  ++E FR G  N+IVAT I EEGLD+   +LVI FD   +   
Sbjct: 410 GNNSG--LQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICS 469

Query: 78  MIQRMGR 85
            IQ  GR
Sbjct: 470 FIQSRGR 474

[Close]

BLAST of Lsi11G010040 vs. TAIR 10
Match: AT3G03300.3 (dicer-like 2 )

HSP 1 Score: 52.8 bits (125), Expect = 5.1e-07
Identity = 31/67 (46.27%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 18  GQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDIMEVDLVICFDANVSPIR 77
           G +SG  L+ Q++K Q  ++E FR G  N+IVAT I EEGLD+   +LVI FD   +   
Sbjct: 424 GNNSG--LQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICS 483

Query: 78  MIQRMGR 85
            IQ  GR
Sbjct: 484 FIQSRGR 488

The following BLAST results are available for this feature:

BLAST of Lsi11G010040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
I3XHK1	8.8e-89	69.71	DEAD-box ATP-dependent RNA helicase FANCM OS=Arabidopsis thaliana OX=3702 GN=FAN...	[more]
A0A1D5PRR9	1.6e-34	49.34	Fanconi anemia group M protein OS=Gallus gallus OX=9031 GN=FANCM PE=1 SV=1	[more]
Q8IYD8	3.4e-32	44.44	Fanconi anemia group M protein OS=Homo sapiens OX=9606 GN=FANCM PE=1 SV=2	[more]
Q8BGE5	4.5e-32	50.74	Fanconi anemia group M protein homolog OS=Mus musculus OX=10090 GN=Fancm PE=1 SV...	[more]
A7EFH4	1.7e-31	44.59	ATP-dependent DNA helicase mph1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 /...	[more]

BLAST of Lsi11G010040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JS97	3.0e-132	90.23	DEAD-box ATP-dependent RNA helicase FANCM isoform X6 OS=Cucurbita maxima OX=3661...	[more]
A0A6J1K1N4	3.0e-132	90.23	DEAD-box ATP-dependent RNA helicase FANCM isoform X2 OS=Cucurbita maxima OX=3661...	[more]
A0A6J1K1P1	3.0e-132	90.23	DEAD-box ATP-dependent RNA helicase FANCM isoform X7 OS=Cucurbita maxima OX=3661...	[more]
A0A6J1JVT6	3.0e-132	90.23	DEAD-box ATP-dependent RNA helicase FANCM isoform X5 OS=Cucurbita maxima OX=3661...	[more]
A0A6J1JS92	3.0e-132	90.23	DEAD-box ATP-dependent RNA helicase FANCM isoform X1 OS=Cucurbita maxima OX=3661...	[more]

BLAST of Lsi11G010040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884540.1	4.9e-137	92.28	DEAD-box ATP-dependent RNA helicase FANCM isoform X6 [Benincasa hispida]	[more]
XP_038884541.1	4.9e-137	92.28	DEAD-box ATP-dependent RNA helicase FANCM isoform X7 [Benincasa hispida]	[more]
XP_038884542.1	4.9e-137	92.28	DEAD-box ATP-dependent RNA helicase FANCM isoform X8 [Benincasa hispida]	[more]
XP_038884535.1	4.9e-137	92.28	DEAD-box ATP-dependent RNA helicase FANCM isoform X1 [Benincasa hispida]	[more]
XP_038884544.1	4.9e-137	92.28	DEAD-box ATP-dependent RNA helicase FANCM isoform X9 [Benincasa hispida]	[more]

BLAST of Lsi11G010040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G35530.2	7.7e-88	68.60	DEAD/DEAH box RNA helicase family protein	[more]
AT1G35530.1	1.6e-64	56.85	DEAD/DEAH box RNA helicase family protein	[more]
AT3G03300.1	5.1e-07	46.27	dicer-like 2	[more]
AT3G03300.2	5.1e-07	46.27	dicer-like 2	[more]
AT3G03300.3	5.1e-07	46.27	dicer-like 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 8..89 e-value: 2.9E-15 score: 66.7
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 25..88 e-value: 3.4E-17 score: 62.8
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 1..136 score: 13.541384
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 2..123 e-value: 2.7E-36 score: 126.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 27..109
IPR039686	FANCM/Mph1-like	PANTHER	PTHR14025:SF20	FANCONI ANEMIA GROUP M PROTEIN	coord: 1..241
None	No IPR available	PANTHER	PTHR14025	FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER	coord: 1..241

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G010040.1	Lsi11G010040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032508	DNA duplex unwinding
biological_process	GO:0006281	DNA repair
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0043138	3'-5' DNA helicase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0016787	hydrolase activity