Lsi11G009870 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi11G009870
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionMaturase K
Locationchr11: 16460968 .. 16467258 (-)
RNA-Seq ExpressionLsi11G009870
SyntenyLsi11G009870
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATATTGTTTATTTTTTCTTTTGATATTCTTATTTGATTTAGTTAGACTTGCAACTATAAATTGGATTTTTGGTGAAAAAGATTGAAAAAAGAGTTTTTAAAACAAAAGGAAAAAAATGAGTTTTTGGAAAAGTGAGAATCCCACATTGCTTAATTTAGCATTGGGATCTCACTTTATTTACCTTTTCCTTTACTGATGGGCTTGGGCCCCAAGGGGTACCCATGTTTTGAAAAGGATGAGGAGATAGGCAATGGTCAGCTTGGTGACTTCGAGGTGAGGTGGCAATAAAGATAATTTTTTGTTAGTATTTTATTTTATTTTAATTTTTTCAAAATAATAAAATCTCTTTTAGAATTTACGGTCTTGCCCCTCGCCGCATCCTTCGCATCCGCACCGTCTTTTTTGGCGCACGTGGTGTGGACGCTCCTCACCGGGCGGCGCACGTTCTGTGGCCGAGCGTTCGTCCCTCATGCGACAGTTGAGCCTCGTGCAGTATAAATGCCCTGCCATCTTCAGTTGAAAGTAGGACGAAAAATCTTCTCTCTGAATATCGAGCAACATAGAAAGAGTGTGAGTACCGATCGATTCTTGTGCGAGTTTCGACTGAGACAGTATTATTCTGGGCTGTTTTATCCTGGGGACGGCGTGGCATTCAGTCAGAACTGCAAGCACCTTGGGCAGAGCCGCGAAACGTCTTAAAGAGAGCGAGCTCCGCGACTCAGCCTTCACGAGCTTTTATTTTGCAGGTTCATTGCATAGTAGGCATCCAACTTCATCGCATAGCAAGCGTCCAACACAGTTCATCGCATACCAGCGTTGAGTTGACCACCTTGCGTTGAACGCATTATGCACAAGGTTTCCAACAATTTTAAGACGATATCCATCTACCGTTATAGTAATGGCCTAAAACGATGTCATGGTCTCCGATCTCAACCAACCATTCTGTTTCGAAGGAGGGAACTTCAAGCGGTGAAAACAGAAGATGATGTTCTTCCTCACCGTCAAGAAGGTCACTGATACCTGCAGCACGGAAAAACCAGAAGTCCCGGAGAAAAATCCAACTAATGAGCAGATCAAGGCAGTTGCTGACTAGGAAGAAAAGAATTTTTTGTGTAAGAATTTTATATTAAATGGTTTGACTGATGATCTGTATGATTATTACAGTTCTATGAAGACAGCAAAAGATATATGGGAGGCACTGCAGAAAAAGTACGACACCGAGGAGGCCGGATCGAAGAAATATGCTGTAAGCCATTACTTGAAGTTCCAGATGACGAACGAAAAGTCTGTGGAGTTCCAATCCCATGAATTGCAGAAAATCGCTCATGAAATTATTAGCGAAGGTATGCCTCTGAACGAGCAATTTCAAATTGCTGTTATTATTGACAAATTGCCCCCTATGTGGAAGGATTTTAAAAATACGTTGAGGCACAAGACCAAGGAATTCTCCATGGAGAGCCTGATCCCACGTCTGAGGATCGAGGAGGAGGCCTAGAAGCAGGACCAGAAGGAGAAGGTAAACGCCTTGCCAAGGAAACCCGTCCCAGCCGCCGTGAAACCTGACCAGAAGCAGAAAAGAACTAAAAGAAAAGGTGAGAATCGTGGATCCAGCAACCAACAGAACCAGAAGAGACAGAGACCCCCCTCAGGAGAAACTGTACAGTTCCTCTGCTATAACTGTAATAAACCTGGACATATGGCTAGAAACTGTAGGAACGGTCGTCGTCCTGCTGGGCATGCAAACCTGACAGAAGAGTCGTTGATAGCCATGATCACAGAAGTAAATGTGATCGGTGGTTTTAAGGGATGGTGGATAGACACGGGCCCCACGCGCCATGTCTGTCACGACCTTAGTCAGTTTAAAACATACACTGAAACTAAGGATAAGAATGTTCTGTTGGGGGATCACCACTCGTCAAGAGTTGCTGGAACGGGCAAGGTGAAGCTGAAGTTTACCTCCGAAAAGACGCTCACTCTAAGGGATGTCTTGCACACTCCAGAGATAAGGAAGAACCTGGTCTCGGGTTATCTCCTCAGTAAGGCTGGCTTCACACAAACCATAGGGGCAGATTTGTACACTTTAACTAAAAACAACATGTTTGTAGGAAAATGATACGCAACGGATGGCATGTTTAAGTTAAATGTTGAAATTAATAAAGCAAATTCTTCTGCGTATATGTTGTCTTCGTTTAATGTTTGGCATGCTAGGAATTAGTAACATGAGTAGGTTAGACATGATTCCTAAGTTATCTTCAAATGAATTTGATAAATGCGAATTTTGTAGTCAAGCTAAAATAACAAAAACCTCGCATAAATCTGTACTTAGGGAATCTGAGCCTCTAGATTTAATTCATTCTGATATATGTGAATTTGATGGTGTTTTGACTAGAAATAGCAAACGTTATTTTATCACGTTTATAGATGATTACTCTGATTTCACTTTTGTTTATTTGTTGAAAAATAAAAGTGATGCATTTGATGCTTTCAAGCTTTTTGTAGTTGAAATAGAAAACCAGTATAATAGAAAGGCTAAAAGACTTCGTAGTGATAGGGGAACTGAGTATGACTCAGATAGTTTTAATAAATTCTATAACTCACATGGAATAATACATGAAAAGACTGCGCCTTACTCTCTTGAAATGAACGGTAAAGCTGAAAGGAAGAATAGAACTCTAGCCGAGCTAGTAGTTGCTATCCGCCTTAATTTAGGAGCTGCGTCCTATTGGTGGGGAGAAATTCTCCATACTGTGTGTTATGTCCTAAATAGAATTCCAAAATCTAAAAACACAACTTCACCATATGAAGTCCTTAAGAATAAAAGACCAAACTTGTCCTATTTTAGAACGTGGGGTTGCTTAGCCTACGTTAGGATTCCTGACCCAAAAAGAAGAAAACTTACCAGTAGGGCCTACGAGTGCGTTTTTATAGGTTATGTCGTGAATAGTAAAGCCTATAGGTTCTACGATCTTTCAAACCAAGTAGTCATTGAATCGATAGATGCCGACTTCTTTGAGGATAGATTTCCCTTTAAATCTAGAAATAGTGGGGGCGTGAGCTCCAGTAGTCTACCTCCAGTTAGAAGTCTTCCCTCTTCTGAGGAAGCCGTCTCTGAGCCTAAAAGGAGCAAACAGACAAGAACAGTTAAAGACTTTGGAGACGACTTTCAGACCTACAATGTAGAAGAAGATCCTAGAGACCTTAAGGAAGTCCTGTCCTCTGTAAACGCCAACTTATGGCAAGAAGCTATAAACGACGAAATGGACTCTCTAGAGTCAAATAGGACTTGGCACCTAGTAGACCTACCCCCAGGTTGCAAAGCCATAGGATGTAAATGGATCCTGAAGAAGAAACTTAAACCTGATGGAACCATAGACAAGTTTAAAGCTAGGTTAGTAGCCAAAGGCTTCAGACGGAGAGAAAACATAGACTTCTTTGACACGTTTTCACCTGTCACTAGAATCACTTCCATTCACGTACTGTTTTCTCTCGCCGCTTTAAACAACCTCGTAGTACATTAGATGGATGTAAAGACTACATTCCTAAACGGTGATTTGGAAGAAGAGATTTATATGGAACAACCAGAAGGCTTTGTAGTCTATGGTCAGGAGAACAAAGTCTGTAAGTTAGATAAATCTCTCTATGGCCTGAAACAAGCTCCTAAGCAATGGCATGAGAAATTTGACAACCTTATTCTGTCTGAACGTTTCAAAGTTAATGAAAGTGACAAATGCATCTACTATAAGTTTGAAAATAGCCTTTGCACAATCCTTTGCTTATATGTAGATGATTTGTTAATATTTGGTTCAAATTTGCACGTCATTAATAACGTAAAATCTATGTTGAGTGCAAACTTTGATATGAAAGACTTAGGAGAAGCAAGTGTAATCTTAGGCATAAAAGTCACTAGGTCAGAAAAGGGAATTTCCTTAGATCAATCTCATTATGTAGAAAAGATCCTTAGAAAATACAATTACTTTGATTGTAAACCTGCCTATACTCCTTATGATCGTAGTGTAAAGTTGTTCAAGAACACTGGTGACAGTGTTAATCAATCCGAGTATGCGAGCATCATAGGCAGTCTTAGATGTGTTGCTGATTGCACTAGACCAGACATAGCTTATGCTGTAGGTTTACTATGTAGGTTTACAAGCAGACCTAGTATAGAGTATTGGAATGCTATAGAAAGGGTTATGAGATATTTAAAGAAAACTCAGAACCTAAGATTACACTATCAAACGTTTCCTGCTGTCCTGGAAGGCTATAGCGATGCTGATTGGAACTCCCTCTCGGATGACTCAAAGGCTACCAGCGGCTATATCTTCAATATAGCTAGTGGAGCTGTTTCCTGGAAGTCTAAGAAACAGACAATATTAGCCTAGTCAACGATGGAGTCAGAAATGATAGCACTGGCAACAGCCAGTGAAGGAGCAGGCTGGCTTAGAAGTCTGCTATCAGAGATTCCCTTATGGGAAAAGCCGGTACCAGCCATTTTGATCCATTGTGATAGTACTGCAACTATCGCAAAAGTTCAGAACCGTTATTATAACAGAAAGAGACGACAAATACGTCGTAAGCACAACACCATTAGAGAGTTCCTCACTATTGGTGCCGTTAAAGTGGATCATATTCTGACTGATGAGAACTTGGCAGATCCTTTGACGAAAGGACTGGCCAGAGAAAAGGTTTTCAAACCCTTAGAAAGGATGAGACTCCTGCCTATAGAAAGATGAATCACGAGTGAGGAAAACCCAACCTGTAGACTGGAGATCCCAAGAAACAGGTTCAAAGGGTAATAACTGATCACAAGTGATAGGTAGTGAATCATGCAAATAAACATAGAGTTCACTTCCTAGGACCTAGAGTCTTGGCATGATATCTTGAAGTGAATGATAGGTTGAACTTAGTTCTTAATGAGATCTATACTTGATGTCAAGTGGAGTACCTAGCTACAGAAGTACCCCTGATAGACTCACCTATGTGAATGTGGAAGTGTAGGCCGCTTCCTATGTAATTTTAGGCAAATTCTCTAGAGCGTTCACTAGACTGGGATACACGTGCATGGCCTCAAAGCACGGGCTTTTCGAACTACACTCTAGTAATGCTGTGTGTGAGATGTTGTCAGAGATAGAGTTCAAAACCAAGAGTTACTCTAGTAAAATCTGAATCATCAACACTACGTAAAGGTTCAAGTCGTAAGACACCTTTGCCTATGTACAATGTTATACATTCTGAAATTGCTCGATGAACAAAATGTTTTCCTGTTTTCAAAAATTTTTCAAGTGGGGGATTGTTGATGAAAAAGATTGAAAAAATAGTTTTTAAAACAAAAAGGAAAAATGAGTTTTTGGAAAAGTGAGAATCCCACATTACTCAGTTTAGCATTGGGATCTCACTTTATTTACCATTCCCTTTAGTGATGGGCTTGGGCCTCAAGGGGTACTCATGTCTTGGAAAGGGTGAGGAGATAGGCAATGGTCGTCGTGCGTGATAATTTTTTGTTATTATTTTATTTTATTTTAATTTTTAAAAAATAATAAAATCTCTTTTAGAATTTACGGTCTTGTCCCTTGCCACATCGATCGCATGGTCTTCGGTCATCACGTGGTCTTCGCATCCGTGCCATCTTTTTCGACGCACGTGGTATGGACGAGCGCTCACCGCGCGGCGCATGTTCTGTGGCTAAAAAATTAAAATCTCTTTTAGAATTTACGGTCTTGCCCCTTGCTGAATCGATCGCATGGTCTTCGCATCCGCGCCGTCTTTTTCGGCGCACGTGGTGTGGACGAGCGCTCACCGTGCGGCGCACGTTCTGTGGCCGAACGCTCGTCTCTCATGCGACAGTTGAGCCTCACACAGTATAAATGTCCTGCCATCTTCAGTTGAAAGTAGGATGACAAATCTTTTCTCTTTGAATACCGAGCAACATAGAAAGAGTGTGAGTATCGATCGATTCTTATGCGAGTGCGATACTTTTTTCTTTTTATTCAAGATTTTATGGGAATGAACCCACTACAGAAAATCTAATTAGTTGGAATAAAATTCCTTTTTCTACGTAACCAATCTTCTCATATACGATTAACTTCTTATAGGGGCTTTTTTGAGCGAATATATTTCTATGGAAAAATAGAACATCTTGTCAAAGTGGTTGCTAATTCTTTTTCAGCTATCTTACGGGTCTTCAAGGATCCTTTCATGCATTATGTTAGATATCAAGGAAAATCCATTCTGGTTTCAAAAGATACGCCACTTCTGATTAATAAGTGGAAATATTACCTTGTCAATTTATGA

mRNA sequence

ATGATATTGGGCTTTTTTGAGCGAATATATTTCTATGGAAAAATAGAACATCTTGTCAAAGTGGTTGCTAATTCTTTTTCAGCTATCTTACGGGTCTTCAAGGATCCTTTCATGCATTATGTTAGATATCAAGGAAAATCCATTCTGGTTTCAAAAGATACGCCACTTCTGATTAATAAGTGGAAATATTACCTTGTCAATTTATGA

Coding sequence (CDS)

ATGATATTGGGCTTTTTTGAGCGAATATATTTCTATGGAAAAATAGAACATCTTGTCAAAGTGGTTGCTAATTCTTTTTCAGCTATCTTACGGGTCTTCAAGGATCCTTTCATGCATTATGTTAGATATCAAGGAAAATCCATTCTGGTTTCAAAAGATACGCCACTTCTGATTAATAAGTGGAAATATTACCTTGTCAATTTATGA

Protein sequence

MILGFFERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKYYLVNL
Homology
[Close]
BLAST of Lsi11G009870 vs. ExPASy Swiss-Prot
Match: Q2QDA7 (Maturase K OS=Cucumis sativus OX=3659 GN=matK PE=3 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.4e-27
Identity = 59/65 (90.77%), Postives = 60/65 (92.31%), Query Frame = 0 

Query: 4   GFFERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 63
           G FERIYFYGKIEHLVKV AN FSAILRVFKDP +HYVRYQ KSILVSKDTPLLINKWKY
Sbjct: 239 GLFERIYFYGKIEHLVKVFANYFSAILRVFKDPLIHYVRYQAKSILVSKDTPLLINKWKY 298

Query: 64  YLVNL 69
           YLVNL
Sbjct: 299 YLVNL 303

[Close]
BLAST of Lsi11G009870 vs. ExPASy Swiss-Prot
Match: Q85V90 (Maturase K OS=Rhamnus cathartica OX=3610 GN=matK PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 9.6e-24
Identity = 54/65 (83.08%), Postives = 58/65 (89.23%), Query Frame = 0 

Query: 5   FFERIYFYGKIEHLV-KVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 64
           FFERIYFYGKI+H V +V AN F AI RVFKDPFMHYVRYQGKS LVSKDTPLL+NKWKY
Sbjct: 238 FFERIYFYGKIKHPVEEVFANDFPAIRRVFKDPFMHYVRYQGKSFLVSKDTPLLMNKWKY 297

Query: 65  YLVNL 69
           YLV+L
Sbjct: 298 YLVHL 302

[Close]
BLAST of Lsi11G009870 vs. ExPASy Swiss-Prot
Match: Q9GGJ8 (Maturase K OS=Hamamelis japonica OX=63355 GN=matK PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 2.8e-23
Identity = 50/61 (81.97%), Postives = 54/61 (88.52%), Query Frame = 0 

Query: 7   ERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKYYLV 66
           ERIYFYGKI+HLV+V  N F AIL +FKDPFMHYVRYQGKSIL SK TPLL+NKWKYYLV
Sbjct: 242 ERIYFYGKIKHLVEVFVNDFQAILWLFKDPFMHYVRYQGKSILASKGTPLLMNKWKYYLV 301

Query: 67  N 68
           N
Sbjct: 302 N 302

[Close]
BLAST of Lsi11G009870 vs. ExPASy Swiss-Prot
Match: Q9GGJ6 (Maturase K OS=Hamamelis mollis OX=4396 GN=matK PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 2.8e-23
Identity = 50/61 (81.97%), Postives = 54/61 (88.52%), Query Frame = 0 

Query: 7   ERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKYYLV 66
           ERIYFYGKI+HLV+V  N F AIL +FKDPFMHYVRYQGKSIL SK TPLL+NKWKYYLV
Sbjct: 242 ERIYFYGKIKHLVEVFVNDFQAILWLFKDPFMHYVRYQGKSILASKGTPLLMNKWKYYLV 301

Query: 67  N 68
           N
Sbjct: 302 N 302

[Close]
BLAST of Lsi11G009870 vs. ExPASy Swiss-Prot
Match: Q9MT47 (Maturase K OS=Hamamelis virginiana OX=4397 GN=matK PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 2.8e-23
Identity = 50/61 (81.97%), Postives = 54/61 (88.52%), Query Frame = 0 

Query: 7   ERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKYYLV 66
           ERIYFYGKI+HLV+V  N F AIL +FKDPFMHYVRYQGKSIL SK TPLL+NKWKYYLV
Sbjct: 242 ERIYFYGKIKHLVEVFVNDFQAILWLFKDPFMHYVRYQGKSILASKGTPLLMNKWKYYLV 301

Query: 67  N 68
           N
Sbjct: 302 N 302

[Close]
BLAST of Lsi11G009870 vs. ExPASy TrEMBL
Match: X2F5H9 (Maturase K OS=Lagenaria siceraria OX=3668 GN=matK PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.0e-28
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 0 

Query: 4   GFFERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 63
           GFFERIYFYGKIEHLVKV ANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY
Sbjct: 240 GFFERIYFYGKIEHLVKVFANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 299

Query: 64  YLVNL 69
           YLVNL
Sbjct: 300 YLVNL 304

[Close]
BLAST of Lsi11G009870 vs. ExPASy TrEMBL
Match: X2F4M9 (Maturase K OS=Lagenaria siceraria OX=3668 GN=matK PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.0e-28
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 0 

Query: 4   GFFERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 63
           GFFERIYFYGKIEHLVKV ANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY
Sbjct: 240 GFFERIYFYGKIEHLVKVFANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 299

Query: 64  YLVNL 69
           YLVNL
Sbjct: 300 YLVNL 304

[Close]
BLAST of Lsi11G009870 vs. ExPASy TrEMBL
Match: W0HK76 (Maturase K (Fragment) OS=Lagenaria siceraria OX=3668 GN=matK PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.0e-28
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 0 

Query: 4   GFFERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 63
           GFFERIYFYGKIEHLVKV ANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY
Sbjct: 70  GFFERIYFYGKIEHLVKVFANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 129

Query: 64  YLVNL 69
           YLVNL
Sbjct: 130 YLVNL 134

[Close]
BLAST of Lsi11G009870 vs. ExPASy TrEMBL
Match: A5X4Y0 (Maturase K (Fragment) OS=Peponium caledonicum OX=387134 GN=matK PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.0e-28
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 0 

Query: 4   GFFERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 63
           GFFERIYFYGKIEHLVKV ANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY
Sbjct: 205 GFFERIYFYGKIEHLVKVFANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 264

Query: 64  YLVNL 69
           YLVNL
Sbjct: 265 YLVNL 269

[Close]
BLAST of Lsi11G009870 vs. ExPASy TrEMBL
Match: A0A7M1XP10 (Maturase K (Fragment) OS=Peponium elgonense OX=2766527 GN=matK PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.0e-28
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 0 

Query: 4   GFFERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 63
           GFFERIYFYGKIEHLVKV ANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY
Sbjct: 120 GFFERIYFYGKIEHLVKVFANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 179

Query: 64  YLVNL 69
           YLVNL
Sbjct: 180 YLVNL 184

[Close]
BLAST of Lsi11G009870 vs. NCBI nr
Match: ACT52308.1 (maturase K, partial [Lagenaria siceraria])

HSP 1 Score: 133.7 bits (335), Expect = 6.2e-28
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 0 

Query: 4   GFFERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 63
           GFFERIYFYGKIEHLVKV ANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY
Sbjct: 69  GFFERIYFYGKIEHLVKVFANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 128

Query: 64  YLVNL 69
           YLVNL
Sbjct: 129 YLVNL 133

[Close]
BLAST of Lsi11G009870 vs. NCBI nr
Match: ACT52309.1 (maturase K, partial [Lagenaria sphaerica])

HSP 1 Score: 133.7 bits (335), Expect = 6.2e-28
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 0 

Query: 4   GFFERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 63
           GFFERIYFYGKIEHLVKV ANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY
Sbjct: 70  GFFERIYFYGKIEHLVKVFANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 129

Query: 64  YLVNL 69
           YLVNL
Sbjct: 130 YLVNL 134

[Close]
BLAST of Lsi11G009870 vs. NCBI nr
Match: QHB79885.1 (maturase K, partial [Lagenaria siceraria])

HSP 1 Score: 133.7 bits (335), Expect = 6.2e-28
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 0 

Query: 4   GFFERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 63
           GFFERIYFYGKIEHLVKV ANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY
Sbjct: 104 GFFERIYFYGKIEHLVKVFANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 163

Query: 64  YLVNL 69
           YLVNL
Sbjct: 164 YLVNL 168

[Close]
BLAST of Lsi11G009870 vs. NCBI nr
Match: AHF72617.1 (maturase K, partial [Lagenaria siceraria] >AHF72618.1 maturase K, partial [Lagenaria siceraria])

HSP 1 Score: 133.7 bits (335), Expect = 6.2e-28
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 0 

Query: 4   GFFERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 63
           GFFERIYFYGKIEHLVKV ANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY
Sbjct: 70  GFFERIYFYGKIEHLVKVFANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 129

Query: 64  YLVNL 69
           YLVNL
Sbjct: 130 YLVNL 134

[Close]
BLAST of Lsi11G009870 vs. NCBI nr
Match: QCC63004.1 (maturase K, partial [Peponium sp. NW-2019])

HSP 1 Score: 133.7 bits (335), Expect = 6.2e-28
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 0 

Query: 4   GFFERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 63
           GFFERIYFYGKIEHLVKV ANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY
Sbjct: 120 GFFERIYFYGKIEHLVKVFANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 179

Query: 64  YLVNL 69
           YLVNL
Sbjct: 180 YLVNL 184

[Close]
BLAST of Lsi11G009870 vs. TAIR 10
Match: ATCG00040.1 (maturase K )

HSP 1 Score: 97.8 bits (242), Expect = 3.5e-21
Identity = 44/63 (69.84%), Postives = 50/63 (79.37%), Query Frame = 0 

Query: 6   FERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKYYL 65
           FERI FYGKI H  KV  N+F AIL + KDPF+HYVRY G+ IL +KDTPLL+NKWKYY 
Sbjct: 263 FERIVFYGKIHHFFKVFVNNFPAILGLLKDPFIHYVRYHGRCILATKDTPLLMNKWKYYF 322

Query: 66  VNL 69
           VNL
Sbjct: 323 VNL 325

The following BLAST results are available for this feature:
BLAST of Lsi11G009870 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q2QDA71.4e-2790.77Maturase K OS=Cucumis sativus OX=3659 GN=matK PE=3 SV=1[more]
Q85V909.6e-2483.08Maturase K OS=Rhamnus cathartica OX=3610 GN=matK PE=3 SV=1[more]
Q9GGJ82.8e-2381.97Maturase K OS=Hamamelis japonica OX=63355 GN=matK PE=3 SV=1[more]
Q9GGJ62.8e-2381.97Maturase K OS=Hamamelis mollis OX=4396 GN=matK PE=3 SV=1[more]
Q9MT472.8e-2381.97Maturase K OS=Hamamelis virginiana OX=4397 GN=matK PE=3 SV=1[more]
BLAST of Lsi11G009870 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
X2F5H93.0e-2898.46Maturase K OS=Lagenaria siceraria OX=3668 GN=matK PE=3 SV=1[more]
X2F4M93.0e-2898.46Maturase K OS=Lagenaria siceraria OX=3668 GN=matK PE=3 SV=1[more]
W0HK763.0e-2898.46Maturase K (Fragment) OS=Lagenaria siceraria OX=3668 GN=matK PE=3 SV=1[more]
A5X4Y03.0e-2898.46Maturase K (Fragment) OS=Peponium caledonicum OX=387134 GN=matK PE=3 SV=1[more]
A0A7M1XP103.0e-2898.46Maturase K (Fragment) OS=Peponium elgonense OX=2766527 GN=matK PE=3 SV=1[more]
BLAST of Lsi11G009870 vs. NCBI nr
Match NameE-valueIdentityDescription
ACT52308.16.2e-2898.46maturase K, partial [Lagenaria siceraria][more]
ACT52309.16.2e-2898.46maturase K, partial [Lagenaria sphaerica][more]
QHB79885.16.2e-2898.46maturase K, partial [Lagenaria siceraria][more]
AHF72617.16.2e-2898.46maturase K, partial [Lagenaria siceraria] >AHF72618.1 maturase K, partial [Lagen... [more]
QCC63004.16.2e-2898.46maturase K, partial [Peponium sp. NW-2019][more]
BLAST of Lsi11G009870 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG00040.13.5e-2169.84maturase K [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024942Maturase MatK, N-terminal domainPFAMPF01824MatK_Ncoord: 5..68
e-value: 2.8E-30
score: 106.1
IPR002866Maturase MatKPANTHERPTHR34811MATURASE Kcoord: 5..68

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G009870.1Lsi11G009870.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006397 mRNA processing
biological_process GO:0008380 RNA splicing
biological_process GO:0008033 tRNA processing
cellular_component GO:0009507 chloroplast
molecular_function GO:0003723 RNA binding