Lsi11G005590 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAGGTAGGTTTAGCTTTCACTTATTAGTGAATGGAGTACAATGAAACTTCTACCTATCCTTACAAGTTACAATATGATATTGTAAATCTTCATTTTGGTAGCACTCAAAATGCTTCATACCAATGAACATAATTGTCTTCACTTATATACTAATTATCATTCTCTTCCCCTACCAATGTGGGACTTTGTTTGCACTCCTAACACAAACAACGCCTCACATTAGTTAGGGAATGGATAAATTCATAGTATATAAGTGAGGACAATTATCTCTATGGTATTAGGCTTTTTAAAGTGGTTCCAAAAGTAAAGTCAATCATACCATTGTGGGAGATAGGATTGGAGGTTCCATTCTTATTATTTATCATCTCCAATGTTGAGGGATTAATTTGAAAAATATATTTAAACAAATGAAGGACTAACGTGAAAATCTTTATACATAGTAGGCCATTTAGGGACTAAATTGAAAAAAAGAATAAAAAACAATTTATTGATCCCCCCGGAGATTTGGACAGCAATTAAAATATGAGTACAAGATTATTGCTCTTTTTACTACAAGTATGATAAAATGATTTGTGATGATATAGAGCTTCAATCATGGTGGAATGAGGTTAGAGAGAAAGGTCATGAAGATAAGAAAAATGAAACATGGTGGCCAAAATTGCAAAATATTAAGGAACTAGTTGAGACATGTACTATCATTATCTGGATATCCTCAGCTTTTCATGTTGCAGTTAACTTTGGACAATATTCTGATGGTGGTTTTTTTCCGAACCGACCCACAATCAGTACAAGATTGTTGCCTATAGAGGGAACTCCAGATTATAAAGAACTTGAGTTGCATCCGGAGAAGGCTTTCTTGAAAACAATTTTTTCTCAACGAAAAGATAGTTTTTCAGTTGTCGCAACCATTGCAATTTTGTCAACACATTTTTCTGACGAGGTGTATTTAGGGAAAGAAGCAATCCATAGTGGACATGAGAAGTTTAAGAGAAGGTTAGGTGAAATTGAGGACATGATTTTGAAAAGAAACCAAGATCCTAAGTTGAAGAATCGAGTTGGACCTGTAAATATGCCTTACACTCTACTCTTTCCAACTAGTAACAAAGGCATCACAGGCAAAGGAATTTCTAATAGCATTTCCATTTGA ATGTCAGGGAAAGAAGCAATCCATAGTGGACATGAGAAGTTTAAGAGAAGGTTAGGTGAAATTGAGGACATGATTTTGAAAAGAAACCAAGATCCTAAGTTGAAGAATCGAGTTGGACCTGTAAATATGCCTTACACTCTACTCTTTCCAACTAGTAACAAAGGCATCACAGGCAAAGGAATTTCTAATAGCATTTCCATTTGA ATGTCAGGGAAAGAAGCAATCCATAGTGGACATGAGAAGTTTAAGAGAAGGTTAGGTGAAATTGAGGACATGATTTTGAAAAGAAACCAAGATCCTAAGTTGAAGAATCGAGTTGGACCTGTAAATATGCCTTACACTCTACTCTTTCCAACTAGTAACAAAGGCATCACAGGCAAAGGAATTTCTAATAGCATTTCCATTTGA MSGKEAIHSGHEKFKRRLGEIEDMILKRNQDPKLKNRVGPVNMPYTLLFPTSNKGITGKGISNSISI Homology
BLAST of Lsi11G005590 vs. ExPASy Swiss-Prot
Match: Q43191 (Probable linoleate 9S-lipoxygenase 5 OS=Solanum tuberosum OX=4113 GN=LOX1.5 PE=2 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 1.4e-14 Identity = 37/56 (66.07%), Postives = 46/56 (82.14%), Query Frame = 0
BLAST of Lsi11G005590 vs. ExPASy Swiss-Prot
Match: O24379 (Linoleate 9S-lipoxygenase 2 OS=Solanum tuberosum OX=4113 GN=LOX1.2 PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 2.9e-12 Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 0
BLAST of Lsi11G005590 vs. ExPASy Swiss-Prot
Match: Q41238 (Linoleate 9S-lipoxygenase 6 (Fragment) OS=Solanum tuberosum OX=4113 GN=LOX1.6 PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 2.9e-12 Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 0
BLAST of Lsi11G005590 vs. ExPASy Swiss-Prot
Match: Q43190 (Probable linoleate 9S-lipoxygenase 4 OS=Solanum tuberosum OX=4113 GN=LOX1.4 PE=2 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 4.9e-12 Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 0
BLAST of Lsi11G005590 vs. ExPASy Swiss-Prot
Match: P37831 (Linoleate 9S-lipoxygenase 1 OS=Solanum tuberosum OX=4113 GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 6.4e-12 Identity = 34/56 (60.71%), Postives = 43/56 (76.79%), Query Frame = 0
BLAST of Lsi11G005590 vs. ExPASy TrEMBL
Match: A0A5D3CPU3 (Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00740 PE=3 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 5.8e-16 Identity = 42/56 (75.00%), Postives = 52/56 (92.86%), Query Frame = 0
BLAST of Lsi11G005590 vs. ExPASy TrEMBL
Match: A0A5A7TXS8 (Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00770 PE=3 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 5.8e-16 Identity = 42/56 (75.00%), Postives = 52/56 (92.86%), Query Frame = 0
BLAST of Lsi11G005590 vs. ExPASy TrEMBL
Match: A0A1S4DZQ6 (probable linoleate 9S-lipoxygenase 5 OS=Cucumis melo OX=3656 GN=LOC107991264 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 5.8e-16 Identity = 42/56 (75.00%), Postives = 52/56 (92.86%), Query Frame = 0
BLAST of Lsi11G005590 vs. ExPASy TrEMBL
Match: A0A6J1HLL8 (Lipoxygenase OS=Cucurbita moschata OX=3662 GN=LOC111464693 PE=3 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 2.9e-15 Identity = 45/64 (70.31%), Postives = 55/64 (85.94%), Query Frame = 0
BLAST of Lsi11G005590 vs. ExPASy TrEMBL
Match: A0A0A0LGD0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G023850 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.9e-14 Identity = 44/64 (68.75%), Postives = 54/64 (84.38%), Query Frame = 0
BLAST of Lsi11G005590 vs. NCBI nr
Match: XP_038877029.1 (probable linoleate 9S-lipoxygenase 5 [Benincasa hispida]) HSP 1 Score: 93.2 bits (230), Expect = 9.1e-16 Identity = 47/64 (73.44%), Postives = 55/64 (85.94%), Query Frame = 0
BLAST of Lsi11G005590 vs. NCBI nr
Match: XP_016901463.1 (PREDICTED: probable linoleate 9S-lipoxygenase 5 [Cucumis melo]) HSP 1 Score: 92.8 bits (229), Expect = 1.2e-15 Identity = 42/56 (75.00%), Postives = 52/56 (92.86%), Query Frame = 0
BLAST of Lsi11G005590 vs. NCBI nr
Match: TYK13811.1 (putative linoleate 9S-lipoxygenase 5 [Cucumis melo var. makuwa]) HSP 1 Score: 92.8 bits (229), Expect = 1.2e-15 Identity = 42/56 (75.00%), Postives = 52/56 (92.86%), Query Frame = 0
BLAST of Lsi11G005590 vs. NCBI nr
Match: KAA0048010.1 (putative linoleate 9S-lipoxygenase 5 [Cucumis melo var. makuwa]) HSP 1 Score: 92.8 bits (229), Expect = 1.2e-15 Identity = 42/56 (75.00%), Postives = 52/56 (92.86%), Query Frame = 0
BLAST of Lsi11G005590 vs. NCBI nr
Match: KAG6583413.1 (putative linoleate 9S-lipoxygenase 5, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 90.5 bits (223), Expect = 5.9e-15 Identity = 45/64 (70.31%), Postives = 55/64 (85.94%), Query Frame = 0
BLAST of Lsi11G005590 vs. TAIR 10
Match: AT1G55020.1 (lipoxygenase 1 ) HSP 1 Score: 69.7 bits (169), Expect = 1.0e-12 Identity = 37/64 (57.81%), Postives = 46/64 (71.88%), Query Frame = 0
BLAST of Lsi11G005590 vs. TAIR 10
Match: AT3G22400.1 (PLAT/LH2 domain-containing lipoxygenase family protein ) HSP 1 Score: 65.1 bits (157), Expect = 2.5e-11 Identity = 33/61 (54.10%), Postives = 43/61 (70.49%), Query Frame = 0
BLAST of Lsi11G005590 vs. TAIR 10
Match: AT1G67560.1 (PLAT/LH2 domain-containing lipoxygenase family protein ) HSP 1 Score: 60.8 bits (146), Expect = 4.7e-10 Identity = 32/55 (58.18%), Postives = 37/55 (67.27%), Query Frame = 0
BLAST of Lsi11G005590 vs. TAIR 10
Match: AT1G17420.1 (lipoxygenase 3 ) HSP 1 Score: 53.9 bits (128), Expect = 5.7e-08 Identity = 26/54 (48.15%), Postives = 34/54 (62.96%), Query Frame = 0
BLAST of Lsi11G005590 vs. TAIR 10
Match: AT1G72520.1 (PLAT/LH2 domain-containing lipoxygenase family protein ) HSP 1 Score: 53.9 bits (128), Expect = 5.7e-08 Identity = 25/54 (46.30%), Postives = 35/54 (64.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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