Lsi11G000030 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi11G000030
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Descriptionpleiotropic drug resistance protein 3-like
Locationchr11: 10887 .. 14684 (+)
RNA-Seq ExpressionLsi11G000030
SyntenyLsi11G000030
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCCAACCACGGAGGAGAGGGAGCCGGTCGGAATTGAACTGCCGGAGATCGGAAGAATAAGAAGCTTTAGTTTGTCATTCCGCCAACAGAATTCGAGTTTTCGAAGCAACTCAGCTGCAGCGGTAGTGGACGAGGACGAGAGGGATACTGTAGATGCTTCTCTTTGGGCAGCGGTCGAGAGATTACCGACGCTTGAACGGTTGAGATCATCGTTGTTCGACGATATTGGAGGAGTAGAAGTTGAGGAGAAAGGTGGGAGAAGAGTTGTTGATGTTACTAAGCTTGGAGATGTGGAGCGCCATCTCTTTATTCAAAAACTCATCAAACACATTGAAAATGATAATCTCAAGCTCTTAACGAAAATTAAAGAGAGAATCCACGAGTAAGCAATTATCTCTCTCTATAGACACTATAGATCATCTATCACAGTCTATCACTGATAGGTACTATAGATTGTCTATCACTGATAGACATGACATTTTGCTACATTTACAAATATTTCCAATAGCTTTGTCATTAAAACAATTATTCTTATTATTTTATTTTTGGTTTAATTGTATTCAATTTAAGTGAAAAAGAGACATGTTTTTTAATTATAAATTTGGTCTCAATGATTTGGAGAAAGTTAAAATTTAATTTCTATAATTTTAGAAATTAGAATTTAGTCTTTATGGTTTGGTAAAACCTTAATTATAAATAATTTCCAAGGTTGTTTTCAAATATAGAAAAATGAGTCAAATTATTTATAAATATAAAAAAATTTCACTGTCTATGAACTATAGACTTCAACTTCTATAGTAGTCTATTGTTGATAGACAGTGAAATTTTTCTATATTTGTAAATAGTTTGATACTTTTTCTATTTATAATAATTTTCCTAATCCCCATTGTCTGATAAAATTTTTATAAAACAGTTCCTACCGTAAACAGTTCCTACCGTAGGGAGTATCTGTAAGAATTTTATTAAAATAGAGAGACTAAATTCTAATTATAAATTATAGAGATTAAATTTTTTTTTTTTAGTATACAAACCAAATTTGTAATTTAACTTTTTTTTAATTTTATATATGAAGGTATTTAAATTTCACTGTACAAGTTTTCTTTTAATTATATTAAATTTGATCGGATGGGGCCAACAATGGAGGGTTGACCAATAAAATAAAACAAAAAAGATTGAATGTCACTTAATTTATATTTTATTTCTCAAACTTTCAACGATTGTTAGATAGAGATTGCCTCAATTTTGATCGACGAGATTGGATAACCACATTGAAATCGTTATAAATTTAGTCATTCATTTTTTTATTTTACTTGTTTTTCTTTTCATTTAGTCTTCTTCGTGAATTATTGTTAGGAGTCATTTGTTTCGTGAGGATCTAAAATTCCTATAGATTGGACATCTAAATTACCATATTTATTTTGTGATAACGTAAGATGTCTTGGTGCACTTACTGATCCCTCATGCTTTGTGAATACTTTTAAAAAAAAAAAAAAGATGCTCAGATATCTAGAGATTCTCAGGTATCCTAGAATATCCACACAGAGGCATCCCAAAGTTGGGATGCGTTCCAGGTAAAATTAATTCCAACTCGTCTCTAACAAGTGTACATTCGAAGTGGATGTTAAGTGTATTAATCTTGGACAGACTTAACGATTTGCACAATCTAGATTGTGTTGGATTTTCTTTTAAGGTAGTGGTATTCTCCGACATAACAATTCATTTTCGGCATCGTTGACGATTAAAATATAGCTACTTCATCTTATTAACTTGGTTTTGCACTTAGCAAAATTGACTCCAAGTATGGGTTGTTCTAAACTAATGGACCATTGTTGGTTTGGTTGGTTAGACTAATTTTAAAGAAATTGGCATACTCTGATGACAAGAAAATACAAATCAGATAATGGACAATCCAAATCAATATTTTGTTAGTCGTATGAATCCATTTCGATTTTTGTTTTTGAAAATTAAGTCTATTTCCTCTCTTTTTTTTTTAACCATAGTTTGCATCTTTCTTAAGTATAAGAATTGAATTCTTAGTCAAATTCCTAAAACAAAAACTACTTGTTTTAGTTTTCAAATTTTGACTTGGTTTTTTCAAAATATTGATAAAAAATAGATAACAAAACAAAAAAAATTTAGAGATGGAGTGGGTGTTTGTATGTGTAATTTTTAAAAACTAGAAATTAACGCCCCGTTTGGTAACAATTTCGTTTTTAGTTTTTGATTTTTGAAAATTAAGCCTATAAATATTTCTTCCACCTCTAAATCTGTTGTTTTAATATCTACTTTTGAAAACTAAAAAAAGTACGTAGTTTTTTTTTAAAAAAAAAAACTTGCTATTTGTTTTTAAAATTTGGTTAAGAATGCAATTCTTCTACTTAAGATTGATACAAAAATAAAAAACGAAATAATTACCTAATAAGATTTAAAAAAATCAAATAGTTATTGAATGAGACGTTAAAATTTAAAATATGAGACACTATGAAATTGTTAATAAAAGGTAATTGTGGTAGGGTTGGTGTGAAATTTCCAACCGTGGAAGTGAAATACAAAAATGTGCATATTGAGGCAGAGTATGAGATTGTTCGTGGGAAAGCCCTTCCAACAGTTTGGAATTCTTTCCAAACCAAGCTTTTTGTAAGTCTATTTTTTTTTTTTTTCTTTTCTTGGATTTCTTTAGTTCTTTTCTATTTGCAATGTAAAAAATAGCTTAAATTAAACGATAAAAGACACTATAATATCCTTTAAAATTATATGATTTCTAGTTTTTTTAATATTACTTTTAAAAGATAATATATATATATATATATATATATATATATATATATATATATATATATATATATTAAACCAATAAGATAGATGGACCTCACAGCTCCGAGAAAAAGCACAACAAAGATAAACCAACTATCCAAAATAATCAAACTACAAAATGACCACACAACCACAGACTAAAACCCCTATTACCAAAATATCTCCAACCTAATTTTTATTCATACTTGTGGTGAAAGGTATGTAACTATGAGCAAGAATAATGAACTAGGATACAAGCTCACTTCTTAGGTTAACCTATCATGCAAAGGCCATACACGAGTGTCATGCCAGCCCTTAGCTACACAGCCAAACCCAAAAAGGAGGAGTCCCTCAACTAGCGTTTAGAAAGAAAAATAGACCAAAAAGACCCCATAACCCGAGGACAAAGCACAAACTCATAAAAACAAACAAACAACGAACCCAAAAACCAAATGGAAGAACACATCCAACAAATGAATCCAAAATAAAGATCCTATAGCCTAGAGACCGAGCACAAACCAAACAAACAAATAAAATTAACACAATAATCATCCTAGCAATTATTGAACTAAAAAAAACTTTATGAATTATAATTTATATTGAATTAGTAATTTTTTATCATCTCAAAAGTTGATAGTTTTATTGATCTCTTACGTTATTTGTTGAACAAAAAAAAATTGTGAGTTCTAATTATATTCACTATGTAATTCTTTAAAATATTACTAATTTTGTAAATTTTGTGGGTAAGTATGAACTTAAATTATTTCAATGCCCCCACACTTGGTTTAAAGATATTTTCCATTGTCGAGATGTGTTATCAATTCATTGAATTGCATATTTGGAAGTCTCTAAATTGCAATAGTTAGTCCAAAATATTACAAAATTCAAAATTTTGCACTTGTTTTATTTAGGACATTATCAAATTTTGTGGTTCGAAGTCTCATGAAGCTAAAATTAACATAATTGAAGATGTGAGTGGTGTCATAAAGCCCGGAAGGTAA

mRNA sequence

ATGGCTCCAACCACGGAGGAGAGGGAGCCGGTCGGAATTGAACTGCCGGAGATCGGAAGAATAAGAAGCTTTAGTTTGTCATTCCGCCAACAGAATTCGAGTTTTCGAAGCAACTCAGCTGCAGCGGTAGTGGACGAGGACGAGAGGGATACTGTAGATGCTTCTCTTTGGGCAGCGGTCGAGAGATTACCGACGCTTGAACGGTTGAGATCATCGTTGTTCGACGATATTGGAGGAGTAGAAGTTGAGGAGAAAGGTAATTGTGGTAGGGTTGGTGTGAAATTTCCAACCGTGGAAGTGAAATACAAAAATGTGCATATTGAGGCAGAGTATGAGATTGTTCGTGGGAAAGCCCTTCCAACAGTTTGGAATTCTTTCCAAACCAAGCTTTTTGACATTATCAAATTTTGTGGTTCGAAGTCTCATGAAGCTAAAATTAACATAATTGAAGATGTGAGTGGTGTCATAAAGCCCGGAAGGTAA

Coding sequence (CDS)

ATGGCTCCAACCACGGAGGAGAGGGAGCCGGTCGGAATTGAACTGCCGGAGATCGGAAGAATAAGAAGCTTTAGTTTGTCATTCCGCCAACAGAATTCGAGTTTTCGAAGCAACTCAGCTGCAGCGGTAGTGGACGAGGACGAGAGGGATACTGTAGATGCTTCTCTTTGGGCAGCGGTCGAGAGATTACCGACGCTTGAACGGTTGAGATCATCGTTGTTCGACGATATTGGAGGAGTAGAAGTTGAGGAGAAAGGTAATTGTGGTAGGGTTGGTGTGAAATTTCCAACCGTGGAAGTGAAATACAAAAATGTGCATATTGAGGCAGAGTATGAGATTGTTCGTGGGAAAGCCCTTCCAACAGTTTGGAATTCTTTCCAAACCAAGCTTTTTGACATTATCAAATTTTGTGGTTCGAAGTCTCATGAAGCTAAAATTAACATAATTGAAGATGTGAGTGGTGTCATAAAGCCCGGAAGGTAA

Protein sequence

MAPTTEEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDERDTVDASLWAAVERLPTLERLRSSLFDDIGGVEVEEKGNCGRVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHEAKINIIEDVSGVIKPGR
Homology
BLAST of Lsi11G000030 vs. ExPASy Swiss-Prot
Match: Q9LFH0 (ABC transporter G family member 37 OS=Arabidopsis thaliana OX=3702 GN=ABCG37 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 5.6e-30
Identity = 78/197 (39.59%), Postives = 112/197 (56.85%), Query Frame = 0

Query: 6   EEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDED----ERDTVDASLWAAVE 65
           ++ E + +EL EIG  RS   SFR+  SSFRS+S+   V+ D    + D   A  WA +E
Sbjct: 8   DDIESLRVELAEIG--RSIRSSFRRHTSSFRSSSSIYEVENDGDVNDHDAEYALQWAEIE 67

Query: 66  RLPTLERLRSSLFDDIGGVEVEEKG----------------------------------- 125
           RLPT++R+RS+L DD G   + EKG                                   
Sbjct: 68  RLPTVKRMRSTLLDD-GDESMTEKGRRVVDVTKLGAVERHLMIEKLIKHIENDNLKLLKK 127

Query: 126 ---NCGRVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHE 161
                 RVG++ PT+EV+Y+++ + AE E+V GKALPT+WN+ +  L +++K  G+K+HE
Sbjct: 128 IRRRIDRVGMELPTIEVRYESLKVVAECEVVEGKALPTLWNTAKRVLSELVKLTGAKTHE 187

BLAST of Lsi11G000030 vs. ExPASy Swiss-Prot
Match: Q5W274 (Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum OX=4097 GN=PDR3 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 7.3e-30
Identity = 81/195 (41.54%), Postives = 108/195 (55.38%), Query Frame = 0

Query: 5   TEEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDER-DTVDASLWAAVERL 64
           ++E E   ++L EIG  RS   SFR Q+SSFRSNSA +   +D+  D  +   WAA+ERL
Sbjct: 7   SDEIESFRMDLAEIG--RSLRSSFRGQSSSFRSNSALSASQKDDAVDEENMLAWAAIERL 66

Query: 65  PTLERLRSSLFDDIGGVEVEEK-------------------------------------- 124
           PT +RLRSSLF++I G +   K                                      
Sbjct: 67  PTFDRLRSSLFEEINGNDANVKRKRVTDVTKLGALERHVFIEKMIKHIEHDNLQLLHKIR 126

Query: 125 GNCGRVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHEAK 161
               +VGV+ PTVEV+YKN+ IEAE E+V GK LPT+WNS ++   ++ +  G +S  AK
Sbjct: 127 KRIDKVGVELPTVEVRYKNLTIEAECELVHGKPLPTLWNSLKSITMNLARLPGLQSELAK 186

BLAST of Lsi11G000030 vs. ExPASy Swiss-Prot
Match: Q9ZUT8 (ABC transporter G family member 33 OS=Arabidopsis thaliana OX=3702 GN=ABCG33 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.3e-22
Identity = 62/166 (37.35%), Postives = 88/166 (53.01%), Query Frame = 0

Query: 33  SSFRSNSAAAVVDEDERDTVDASLWAAVERLPTLERLRSSLFDDIGGVEVEEKG------ 92
           SSFRS+S+    ++   +   A  WA ++RLPT +RLRSSL D  G  E  EKG      
Sbjct: 3   SSFRSSSSRNEHEDGGDEAEHALQWAEIQRLPTFKRLRSSLVDKYG--EGTEKGKKVVDV 62

Query: 93  --------------------------------NCGRVGVKFPTVEVKYKNVHIEAEYEIV 152
                                              RVGV+FP++EV+Y+++ +EA  E+V
Sbjct: 63  TKLGAMERHLMIEKLIKHIENDNLKLLKKIRRRMERVGVEFPSIEVRYEHLGVEAACEVV 122

Query: 153 RGKALPTVWNSFQTKLFDIIKFCGSKSHEAKINIIEDVSGVIKPGR 161
            GKALPT+WNS +    D++K  G +++EA I I+ DVSG+I PGR
Sbjct: 123 EGKALPTLWNSLKHVFLDLLKLSGVRTNEANIKILTDVSGIISPGR 166

BLAST of Lsi11G000030 vs. ExPASy Swiss-Prot
Match: B9GDE5 (ABC transporter G family member 50 OS=Oryza sativa subsp. japonica OX=39947 GN=ABCG50 PE=2 SV=2)

HSP 1 Score: 87.8 bits (216), Expect = 1.2e-16
Identity = 49/141 (34.75%), Postives = 77/141 (54.61%), Query Frame = 0

Query: 24  FSLSFRQQNSSFRSNSAAAVVDEDERDTV----DASLWAAVERLPTLERLRSSLFDDIGG 83
           F L    Q+   + N+ +A  D+ ER+ +    D+S   A++R    + L  ++ DD   
Sbjct: 26  FELELVVQDVQRQQNNGSANTDQHERENLLLLDDSSKSGALKRRLFFDNLLKNVQDDHIR 85

Query: 84  VEVEEKGNCGRVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGS 143
               +K    RV VK P +EV+Y N+ +EAE     G  LP++WNS +     ++K  G 
Sbjct: 86  FLHRQKERIDRVDVKLPAIEVRYNNLSVEAECRTANGDHLPSLWNSTKGAFSGLVKLLGL 145

Query: 144 KSHEAKINIIEDVSGVIKPGR 161
           ++  AKIN++EDVSG+IKP R
Sbjct: 146 ETERAKINVLEDVSGIIKPCR 166

BLAST of Lsi11G000030 vs. ExPASy Swiss-Prot
Match: Q2QV81 (ABC transporter G family member 49 OS=Oryza sativa subsp. japonica OX=39947 GN=ABCG49 PE=2 SV=3)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-14
Identity = 49/148 (33.11%), Postives = 79/148 (53.38%), Query Frame = 0

Query: 15  LPEIGRIRSFSLSFRQQNSSFR--SNSAAAVVDEDERDTVDASLWAAVERLPTLERLRSS 74
           LP   R+R   LS  +   S    S          E + VD     A ER   ++RL + 
Sbjct: 92  LPTADRLRLSLLSSTRGGGSSGDVSEGGGGGAASSELEVVDVRWLGAAERRAVVQRLVAD 151

Query: 75  LFDDIGGVEVEEKGNCGRVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFD 134
           +  D   +  +++    RVGV+  TVEV++++V +EAE ++V GK LPT+WN+  ++   
Sbjct: 152 VKHDHVRMLRKQRERMERVGVRPATVEVRWRDVCVEAECQVVSGKPLPTLWNAALSRFSL 211

Query: 135 IIKFCGSKSHEAKINIIEDVSGVIKPGR 161
           +    G   H++K+ I+E+VSG+IKP R
Sbjct: 212 LAAKLGFSHHQSKVQILENVSGIIKPSR 239

BLAST of Lsi11G000030 vs. ExPASy TrEMBL
Match: A0A1S3C5F9 (LOW QUALITY PROTEIN: pleiotropic drug resistance protein 3-like OS=Cucumis melo OX=3656 GN=LOC103496678 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 8.0e-56
Identity = 124/196 (63.27%), Postives = 138/196 (70.41%), Query Frame = 0

Query: 6   EEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDERDTVDASLWAAVERLPT 65
           +EREPV IE+ EI RIRS S SFR+Q  SFRS+SAA+V +E ERDT+D SLWA VERLPT
Sbjct: 2   DEREPVRIEVSEIRRIRSLSSSFRRQTLSFRSSSAASVEEEHERDTIDPSLWATVERLPT 61

Query: 66  LERLRSSLFDDIGGVEVEEKGNCGR----------------------------------- 125
            ERLRSSLF+D+ GVEV+++ N GR                                   
Sbjct: 62  FERLRSSLFEDVRGVEVDQE-NGGRRVVDVTKLGDVERHLFIQRLIKHIENDNLKLLTKI 121

Query: 126 ------VGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHEA 161
                 VGVKFPTVEVKYKNVHI+AEYEIVRGKALPT+WNSFQTK FDIIK CGSKSHEA
Sbjct: 122 RERIHKVGVKFPTVEVKYKNVHIQAEYEIVRGKALPTLWNSFQTKFFDIIKLCGSKSHEA 181

BLAST of Lsi11G000030 vs. ExPASy TrEMBL
Match: A0A0A0KMI3 (ABC transporter domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G292220 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.8e-55
Identity = 121/194 (62.37%), Postives = 135/194 (69.59%), Query Frame = 0

Query: 6   EEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDERDTVDASLWAAVERLPT 65
           +EREPV IE+PEI RIRS S SFR+Q SSFRSNS A++ +E ERDT+DASLWA VERLPT
Sbjct: 2   DEREPVRIEVPEIRRIRSLSSSFRRQASSFRSNSTASLEEEHERDTIDASLWATVERLPT 61

Query: 66  LERLRSSLFDDIGGVEVEEKG--------------------------------------- 125
            ERLRSSLF+D   VEV+E G                                       
Sbjct: 62  FERLRSSLFEDKREVEVDENGGRRVVDVTKLGDVERHLFIQRLIKHIENDNLKLLTKIKE 121

Query: 126 NCGRVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHEAKI 161
              +VGVKFPTVEVKYKNVHIEAEYEIVRGKALPT+WNSFQ+ LFDI+K CGSKSHEAK 
Sbjct: 122 RIHKVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTLWNSFQSNLFDIMKLCGSKSHEAKT 181

BLAST of Lsi11G000030 vs. ExPASy TrEMBL
Match: A0A6J1DJT5 (pleiotropic drug resistance protein 3-like OS=Momordica charantia OX=3673 GN=LOC111021552 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 8.0e-48
Identity = 118/200 (59.00%), Postives = 133/200 (66.50%), Query Frame = 0

Query: 1   MAPTTEEREPV-GIELPEIGRIRSFSLSFRQQNS-SFRSNSAAAVVDEDERDTVDASLWA 60
           MAPTTEEREP   IE+ E+GR RSFS SFRQQ S SFRS+S+ A   E++ D  +AS+WA
Sbjct: 6   MAPTTEEREPARTIEVVEMGRRRSFSSSFRQQTSLSFRSSSSVAA--EEDGDAEEASVWA 65

Query: 61  AVERLPTLERLRSSLFDDIGGVEVEEKG-------------------------------- 120
           A+ERLPT ERLRSSLFD   GVE +EKG                                
Sbjct: 66  AIERLPTFERLRSSLFD--SGVEEKEKGRRVVDVAKLRDVERRLFIQKLIKHIENDNLRL 125

Query: 121 ------NCGRVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSK 161
                    +VGVKFPTVEVKYKNVHIEA+ E+VRGKALPT+WNS QT L DIIKFCGSK
Sbjct: 126 LTKVRERIHKVGVKFPTVEVKYKNVHIEADCEVVRGKALPTLWNSLQTTLLDIIKFCGSK 185

BLAST of Lsi11G000030 vs. ExPASy TrEMBL
Match: A0A1S3B6X0 (pleiotropic drug resistance protein 3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486825 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.2e-40
Identity = 107/194 (55.15%), Postives = 124/194 (63.92%), Query Frame = 0

Query: 1   MAPTTEEREPVG-IELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDERDTV-DASLWA 60
           MAPTTEE EPV  IE+ EIGR          + SSFR+ S  A   ED+   V DASLW 
Sbjct: 1   MAPTTEESEPVRMIEVGEIGR----------RASSFRNGSTTAEDQEDDDGHVGDASLWK 60

Query: 61  AVERLPTLERLRSSLFDDIGG----VEVEEKGNCGR------------------------ 120
            ++RLPT ERLR SLF+D  G    V+V + G+  R                        
Sbjct: 61  LIDRLPTFERLRLSLFEDDNGRRKVVDVTKLGDVERHRFIQKLIKNIENDNLKLLRKVNE 120

Query: 121 ----VGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHEAKI 161
               VGVKF TVEVKYKNV+IEA+ E+VRGKALPT+WNS QTKLF+IIKFCG+KSHEAKI
Sbjct: 121 RIHKVGVKFSTVEVKYKNVNIEAKCEVVRGKALPTLWNSLQTKLFEIIKFCGAKSHEAKI 180

BLAST of Lsi11G000030 vs. ExPASy TrEMBL
Match: A0A6J1DL52 (pleiotropic drug resistance protein 3-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021539 PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.7e-37
Identity = 91/185 (49.19%), Postives = 113/185 (61.08%), Query Frame = 0

Query: 15  LPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDERDTVDASLWAAVERLPTLERLRSSLF 74
           + ++G   +  +S R + +  R +  ++  D D  D  DASLWAA+ERLPT ER+RSS+F
Sbjct: 1   MDQMGGTTNGRVSLRTELAEIRRSLKSSSSDNDSNDVEDASLWAAIERLPTFERVRSSVF 60

Query: 75  DDIGG-VEVEEKG--------------------------------------NCGRVGVKF 134
           DDI    EV+EKG                                         RVGV F
Sbjct: 61  DDISSRGEVKEKGRRVVDVTKLDDQERHLFVHKLIKHVESDNLKLLRKVRERIDRVGVTF 120

Query: 135 PTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHEAKINIIEDVSGV 161
           P+VEVKYKNVHIEAE E+V GKA+PT+WNS +TKL+DIIKFCG+KSHEAKI+IIED SGV
Sbjct: 121 PSVEVKYKNVHIEAECEVVHGKAIPTLWNSLRTKLYDIIKFCGAKSHEAKIDIIEDASGV 180

BLAST of Lsi11G000030 vs. NCBI nr
Match: XP_038892176.1 (pleiotropic drug resistance protein 3-like [Benincasa hispida])

HSP 1 Score: 237.7 bits (605), Expect = 7.2e-59
Identity = 131/200 (65.50%), Postives = 141/200 (70.50%), Query Frame = 0

Query: 1   MAPTTEEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDE-DERDTVDASLWAA 60
           MAPTTEE EPV IE+ EIGRIR  S S RQQ SSFRS+S A+  +E DERDT+DASLWA 
Sbjct: 1   MAPTTEEIEPVRIEVAEIGRIRRSSSSLRQQTSSFRSSSGASAEEEDDERDTLDASLWAT 60

Query: 61  VERLPTLERLRSSLFDDIGGVEVEEKG--------------------------------- 120
           VERLPT ERLRSSLFD++ GV+VEEKG                                 
Sbjct: 61  VERLPTFERLRSSLFDNVKGVKVEEKGGRRVVDVTKLGDVERHLFIQKLIKHIQNDNLKL 120

Query: 121 ------NCGRVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSK 161
                    +VGVKFPTVEVKYKNVHIEAEYEIVRGKA+PTVWNSFQTKLFDIIK CGSK
Sbjct: 121 LTKIRERIHKVGVKFPTVEVKYKNVHIEAEYEIVRGKAIPTVWNSFQTKLFDIIKLCGSK 180

BLAST of Lsi11G000030 vs. NCBI nr
Match: XP_008456863.1 (PREDICTED: LOW QUALITY PROTEIN: pleiotropic drug resistance protein 3-like [Cucumis melo])

HSP 1 Score: 226.5 bits (576), Expect = 1.7e-55
Identity = 124/196 (63.27%), Postives = 138/196 (70.41%), Query Frame = 0

Query: 6   EEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDERDTVDASLWAAVERLPT 65
           +EREPV IE+ EI RIRS S SFR+Q  SFRS+SAA+V +E ERDT+D SLWA VERLPT
Sbjct: 2   DEREPVRIEVSEIRRIRSLSSSFRRQTLSFRSSSAASVEEEHERDTIDPSLWATVERLPT 61

Query: 66  LERLRSSLFDDIGGVEVEEKGNCGR----------------------------------- 125
            ERLRSSLF+D+ GVEV+++ N GR                                   
Sbjct: 62  FERLRSSLFEDVRGVEVDQE-NGGRRVVDVTKLGDVERHLFIQRLIKHIENDNLKLLTKI 121

Query: 126 ------VGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHEA 161
                 VGVKFPTVEVKYKNVHI+AEYEIVRGKALPT+WNSFQTK FDIIK CGSKSHEA
Sbjct: 122 RERIHKVGVKFPTVEVKYKNVHIQAEYEIVRGKALPTLWNSFQTKFFDIIKLCGSKSHEA 181

BLAST of Lsi11G000030 vs. NCBI nr
Match: XP_031741892.1 (pleiotropic drug resistance protein 3 isoform X2 [Cucumis sativus])

HSP 1 Score: 225.3 bits (573), Expect = 3.7e-55
Identity = 121/194 (62.37%), Postives = 135/194 (69.59%), Query Frame = 0

Query: 6   EEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDERDTVDASLWAAVERLPT 65
           +EREPV IE+PEI RIRS S SFR+Q SSFRSNS A++ +E ERDT+DASLWA VERLPT
Sbjct: 2   DEREPVRIEVPEIRRIRSLSSSFRRQASSFRSNSTASLEEEHERDTIDASLWATVERLPT 61

Query: 66  LERLRSSLFDDIGGVEVEEKG--------------------------------------- 125
            ERLRSSLF+D   VEV+E G                                       
Sbjct: 62  FERLRSSLFEDKREVEVDENGGRRVVDVTKLGDVERHLFIQRLIKHIENDNLKLLTKIKE 121

Query: 126 NCGRVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHEAKI 161
              +VGVKFPTVEVKYKNVHIEAEYEIVRGKALPT+WNSFQ+ LFDI+K CGSKSHEAK 
Sbjct: 122 RIHKVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTLWNSFQSNLFDIMKLCGSKSHEAKT 181

BLAST of Lsi11G000030 vs. NCBI nr
Match: XP_031745924.1 (ABC transporter G family member 37-like [Cucumis sativus])

HSP 1 Score: 225.3 bits (573), Expect = 3.7e-55
Identity = 121/194 (62.37%), Postives = 135/194 (69.59%), Query Frame = 0

Query: 6   EEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDERDTVDASLWAAVERLPT 65
           +EREPV IE+PEI RIRS S SFR+Q SSFRSNS A++ +E ERDT+DASLWA VERLPT
Sbjct: 2   DEREPVRIEVPEIRRIRSLSSSFRRQASSFRSNSTASLEEEHERDTIDASLWATVERLPT 61

Query: 66  LERLRSSLFDDIGGVEVEEKG--------------------------------------- 125
            ERLRSSLF+D   VEV+E G                                       
Sbjct: 62  FERLRSSLFEDKREVEVDENGGRRVVDVTKLGDVERHLFIQRLIKHIENDNLKLLTKIKE 121

Query: 126 NCGRVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHEAKI 161
              +VGVKFPTVEVKYKNVHIEAEYEIVRGKALPT+WNSFQ+ LFDI+K CGSKSHEAK 
Sbjct: 122 RIHKVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTLWNSFQSNLFDIMKLCGSKSHEAKT 181

BLAST of Lsi11G000030 vs. NCBI nr
Match: XP_004140460.1 (pleiotropic drug resistance protein 3 isoform X1 [Cucumis sativus] >KGN50690.2 hypothetical protein Csa_004732 [Cucumis sativus])

HSP 1 Score: 225.3 bits (573), Expect = 3.7e-55
Identity = 121/194 (62.37%), Postives = 135/194 (69.59%), Query Frame = 0

Query: 6   EEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDERDTVDASLWAAVERLPT 65
           +EREPV IE+PEI RIRS S SFR+Q SSFRSNS A++ +E ERDT+DASLWA VERLPT
Sbjct: 2   DEREPVRIEVPEIRRIRSLSSSFRRQASSFRSNSTASLEEEHERDTIDASLWATVERLPT 61

Query: 66  LERLRSSLFDDIGGVEVEEKG--------------------------------------- 125
            ERLRSSLF+D   VEV+E G                                       
Sbjct: 62  FERLRSSLFEDKREVEVDENGGRRVVDVTKLGDVERHLFIQRLIKHIENDNLKLLTKIKE 121

Query: 126 NCGRVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHEAKI 161
              +VGVKFPTVEVKYKNVHIEAEYEIVRGKALPT+WNSFQ+ LFDI+K CGSKSHEAK 
Sbjct: 122 RIHKVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTLWNSFQSNLFDIMKLCGSKSHEAKT 181

BLAST of Lsi11G000030 vs. TAIR 10
Match: AT3G53480.1 (pleiotropic drug resistance 9 )

HSP 1 Score: 132.1 bits (331), Expect = 3.9e-31
Identity = 78/197 (39.59%), Postives = 112/197 (56.85%), Query Frame = 0

Query: 6   EEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDED----ERDTVDASLWAAVE 65
           ++ E + +EL EIG  RS   SFR+  SSFRS+S+   V+ D    + D   A  WA +E
Sbjct: 8   DDIESLRVELAEIG--RSIRSSFRRHTSSFRSSSSIYEVENDGDVNDHDAEYALQWAEIE 67

Query: 66  RLPTLERLRSSLFDDIGGVEVEEKG----------------------------------- 125
           RLPT++R+RS+L DD G   + EKG                                   
Sbjct: 68  RLPTVKRMRSTLLDD-GDESMTEKGRRVVDVTKLGAVERHLMIEKLIKHIENDNLKLLKK 127

Query: 126 ---NCGRVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHE 161
                 RVG++ PT+EV+Y+++ + AE E+V GKALPT+WN+ +  L +++K  G+K+HE
Sbjct: 128 IRRRIDRVGMELPTIEVRYESLKVVAECEVVEGKALPTLWNTAKRVLSELVKLTGAKTHE 187

BLAST of Lsi11G000030 vs. TAIR 10
Match: AT2G37280.1 (pleiotropic drug resistance 5 )

HSP 1 Score: 105.9 bits (263), Expect = 3.0e-23
Identity = 62/166 (37.35%), Postives = 88/166 (53.01%), Query Frame = 0

Query: 33  SSFRSNSAAAVVDEDERDTVDASLWAAVERLPTLERLRSSLFDDIGGVEVEEKG------ 92
           SSFRS+S+    ++   +   A  WA ++RLPT +RLRSSL D  G  E  EKG      
Sbjct: 3   SSFRSSSSRNEHEDGGDEAEHALQWAEIQRLPTFKRLRSSLVDKYG--EGTEKGKKVVDV 62

Query: 93  --------------------------------NCGRVGVKFPTVEVKYKNVHIEAEYEIV 152
                                              RVGV+FP++EV+Y+++ +EA  E+V
Sbjct: 63  TKLGAMERHLMIEKLIKHIENDNLKLLKKIRRRMERVGVEFPSIEVRYEHLGVEAACEVV 122

Query: 153 RGKALPTVWNSFQTKLFDIIKFCGSKSHEAKINIIEDVSGVIKPGR 161
            GKALPT+WNS +    D++K  G +++EA I I+ DVSG+I PGR
Sbjct: 123 EGKALPTLWNSLKHVFLDLLKLSGVRTNEANIKILTDVSGIISPGR 166

BLAST of Lsi11G000030 vs. TAIR 10
Match: AT4G15230.1 (pleiotropic drug resistance 2 )

HSP 1 Score: 79.0 bits (193), Expect = 4.0e-15
Identity = 47/151 (31.13%), Postives = 80/151 (52.98%), Query Frame = 0

Query: 44  VDEDERDTVDASLWAAVERLPTLERLRSSLF--DDIGG---------------------- 103
           VD++E   +    WA VERLPT +R+ ++L   D++ G                      
Sbjct: 25  VDDEEELRLQ---WATVERLPTFKRVTTALLARDEVSGKGRVIDVTRLEGAERRLLIEML 84

Query: 104 -VEVEE---------KGNCGRVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTK 161
             ++E+         +    +VG++ PTVEV++ N+ +EAE +++ GK +PT+WN+ +  
Sbjct: 85  VKQIEDDNLRLLRKIRKRIDKVGIELPTVEVRFNNLSVEAECQVIHGKPIPTLWNTIKGL 144

BLAST of Lsi11G000030 vs. TAIR 10
Match: AT4G15215.1 (pleiotropic drug resistance 13 )

HSP 1 Score: 75.1 bits (183), Expect = 5.7e-14
Identity = 42/125 (33.60%), Postives = 70/125 (56.00%), Query Frame = 0

Query: 36  RSNSAAAVVDEDERDTVDASLWAAVERLPTLERLRSSLFDDIGGVEVEEKGNCGRVGVKF 95
           R  +A     +D  D +D +     ER   +E+L   +  D   +  + +     VG++ 
Sbjct: 45  RVTTALLHTGDDSSDIIDVTKLEDAERRLLIEKLVKQIEADNLRLLRKIRKRIDEVGIEL 104

Query: 96  PTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHEAKINIIEDVSGV 155
           PTVEV++ ++ +EAE ++V GK +PT+WN+ +  L    KF  SK  E KI I++ VSG+
Sbjct: 105 PTVEVRFNDLSVEAECQVVHGKPIPTLWNTIKGSL---SKFVCSKK-ETKIGILKGVSGI 164

Query: 156 IKPGR 161
           ++PGR
Sbjct: 165 VRPGR 165

BLAST of Lsi11G000030 vs. TAIR 10
Match: AT1G15520.1 (pleiotropic drug resistance 12 )

HSP 1 Score: 70.9 bits (172), Expect = 1.1e-12
Identity = 56/180 (31.11%), Postives = 83/180 (46.11%), Query Frame = 0

Query: 27  SFRQQNSSFRSNSAAAVVDED---------ERDTVDASLWAAVERLPTLERLRSSL---- 86
           SF Q ++S R NS+    D           E D  +A  WAA+E+LPT +RLR  +    
Sbjct: 5   SFHQASNSMRRNSSVWKKDSGREIFSRSSREEDDEEALRWAALEKLPTFDRLRKGILTAS 64

Query: 87  ---------------FDD----------IGGVEVEE-----KGNCGRVGVKFPTVEVKYK 146
                          F D          +G  E E+     K    RVG+  PT+EV++ 
Sbjct: 65  HAGGPINEIDIQKLGFQDTKKLLERLIKVGDDEHEKLLWKLKKRIDRVGIDLPTIEVRFD 124

Query: 147 NVHIEAEYEIVRGKALPTVWN---SFQTKLFDIIKFCGSKSHEAKINIIEDVSGVIKPGR 161
           ++ +EAE   V G+ALPT  N   +F  K  + +    ++  + K  I+ DVSG++KPGR
Sbjct: 125 HLKVEAEVH-VGGRALPTFVNFISNFADKFLNTLHLVPNR--KKKFTILNDVSGIVKPGR 181

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LFH05.6e-3039.59ABC transporter G family member 37 OS=Arabidopsis thaliana OX=3702 GN=ABCG37 PE=... [more]
Q5W2747.3e-3041.54Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum OX=4097 GN=PDR3 PE=2 ... [more]
Q9ZUT84.3e-2237.35ABC transporter G family member 33 OS=Arabidopsis thaliana OX=3702 GN=ABCG33 PE=... [more]
B9GDE51.2e-1634.75ABC transporter G family member 50 OS=Oryza sativa subsp. japonica OX=39947 GN=A... [more]
Q2QV811.1e-1433.11ABC transporter G family member 49 OS=Oryza sativa subsp. japonica OX=39947 GN=A... [more]
Match NameE-valueIdentityDescription
A0A1S3C5F98.0e-5663.27LOW QUALITY PROTEIN: pleiotropic drug resistance protein 3-like OS=Cucumis melo ... [more]
A0A0A0KMI31.8e-5562.37ABC transporter domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G29... [more]
A0A6J1DJT58.0e-4859.00pleiotropic drug resistance protein 3-like OS=Momordica charantia OX=3673 GN=LOC... [more]
A0A1S3B6X01.2e-4055.15pleiotropic drug resistance protein 3-like isoform X1 OS=Cucumis melo OX=3656 GN... [more]
A0A6J1DL521.7e-3749.19pleiotropic drug resistance protein 3-like isoform X1 OS=Momordica charantia OX=... [more]
Match NameE-valueIdentityDescription
XP_038892176.17.2e-5965.50pleiotropic drug resistance protein 3-like [Benincasa hispida][more]
XP_008456863.11.7e-5563.27PREDICTED: LOW QUALITY PROTEIN: pleiotropic drug resistance protein 3-like [Cucu... [more]
XP_031741892.13.7e-5562.37pleiotropic drug resistance protein 3 isoform X2 [Cucumis sativus][more]
XP_031745924.13.7e-5562.37ABC transporter G family member 37-like [Cucumis sativus][more]
XP_004140460.13.7e-5562.37pleiotropic drug resistance protein 3 isoform X1 [Cucumis sativus] >KGN50690.2 h... [more]
Match NameE-valueIdentityDescription
AT3G53480.13.9e-3139.59pleiotropic drug resistance 9 [more]
AT2G37280.13.0e-2337.35pleiotropic drug resistance 5 [more]
AT4G15230.14.0e-1531.13pleiotropic drug resistance 2 [more]
AT4G15215.15.7e-1433.60pleiotropic drug resistance 13 [more]
AT1G15520.11.1e-1231.11pleiotropic drug resistance 12 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR48040PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1coord: 27..76
NoneNo IPR availablePANTHERPTHR48040:SF23PLEIOTROPIC DRUG RESISTANCE PROTEIN 3-LIKEcoord: 27..76
NoneNo IPR availablePANTHERPTHR48040:SF23PLEIOTROPIC DRUG RESISTANCE PROTEIN 3-LIKEcoord: 89..160
NoneNo IPR availablePANTHERPTHR48040PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1coord: 89..160

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G000030.1Lsi11G000030.1mRNA