Lsi10G015420 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G015420
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Secretion-regulating guanine nucleotide exchange factor
Location	chr10: 19830174 .. 19831619 (-)
RNA-Seq Expression	Lsi10G015420
Synteny	Lsi10G015420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGATGTGCTAGACTGAATGTGATTGTCCTAAGAGCTCTAGGTCTGGCTTGCTTGTATGCAAATGAAATTATATGTGAAAAGATGTTAGTCAGATGAGGTTATTGTTTATTATGAAATTTTATAATCCTGCTTGAGTCTTGTCCTGTTCAGTGAGACAGTGTTGTTCTAACTTCAAAGATTTCTACTAGTTATTGTGAAATTTTAAAAAGTTCTAGGGGTTGCTGTAATTAGAGACTTAGAAAGAGTGAGGCTTTAAGGTAGGTCACTTGGAGAAGTTGACTAAGTGAATAGGGGTTGCATAGTAGAGGTTCTAATATGATGGATAGTTTTGTTGCATTACTTGTAGATTTGAAATTATTTGTGATGATCTTAATAGAATGCAATATCTTTCTTTCTTCAGTTATGGTGAAGCATGGAAACAAATCAAAGGCATGGTACAAACAGCAGACAATCTCGGTTCTTATTGTGTCTGCTTTTCTTATCCTTTTTGTGTTGATGATGTTATTTCGCAAGGAGTCTCAAGAGCGTGATATTTTAGTTGAGGCAACTCCAAAGCAAAAGTGGGATAGCTTCAACTCTCTTGTACAATTTAATCCGAAAAGAGAGTTTCGCAATGGAACTGACATAATATCACAAGTTCCTGGTTCTCCAAAGGCTGTTCTGTTCTTTGCTCATGGCTGCAATGGTAAAGCTGTCAACTTCTGGGACAAATCTCCTGGATGCCCTTCTTGTGTCGGTCTGCCTGAAGAACGGTTGATTGTCCTCCATGCTCTCAGCAGACATTTTGCGGTTCTTACAATATCGAGCTCTCAGAAATGTTGGACATTGGGGAAGGAATTGGCAGTTGTTAAAGACATAATACGTTGGTGGGTTGAAAAGAACAAACTCGAGGAACTTCCTCTTGTGGGTTTAGGCGCCTCCTCTGGTGGGTATTTTCTTTCAGTGCTGGCCACTAAGTTGAAGTTTAATAGTATTACTTTGATGATTGCTGAAGGGCTGTATGAACAAATGGAGGTAACAGAGAGATACCCACCTACTCTATTTGTACACATGCCGAAAGATCATTTTAGGCAACAAAAGATCAATGAAAATATGGAGTTTTTGAAAGGTAAAGGAATTGATGTTGCAGAGATTGAATGCTTAGAGTTTGCTCTGTGGCCACATTTTTTGGCTGACCGAATCCCAGGACTTGACAAGAGTGTTTCTGCTAAGTTGTTTGAGCTTTTCCAAGCCAAGGGCTTTGTAGATGGAAATGGAAGGATGCTCAAAGATGGGCGTGCAACACCGTGGAAAGAAGCCCTCAAGACGAGTGGGATTAGTTTACTCGATAATAAGCTAACCAATCACATTCAAGAAGAGTTGAATCTTGCCTTTGCATACCACGAAATGACTAGCTTAGAGACTGACAAGATTTTCACATGGTTTGAATCTCACTTGAGATGA

mRNA sequence

ATGAGATGTGCTAGACTGAATGTGATTGTCCTAAGAGCTCTAGTTATGGTGAAGCATGGAAACAAATCAAAGGCATGGTACAAACAGCAGACAATCTCGGTTCTTATTGTGTCTGCTTTTCTTATCCTTTTTGTGTTGATGATGTTATTTCGCAAGGAGTCTCAAGAGCGTGATATTTTAGTTGAGGCAACTCCAAAGCAAAAGTGGGATAGCTTCAACTCTCTTGTACAATTTAATCCGAAAAGAGAGTTTCGCAATGGAACTGACATAATATCACAAGTTCCTGGTTCTCCAAAGGCTGTTCTGTTCTTTGCTCATGGCTGCAATGGTAAAGCTGTCAACTTCTGGGACAAATCTCCTGGATGCCCTTCTTGTGTCGGTCTGCCTGAAGAACGGTTGATTGTCCTCCATGCTCTCAGCAGACATTTTGCGGTTCTTACAATATCGAGCTCTCAGAAATGTTGGACATTGGGGAAGGAATTGGCAGTTGTTAAAGACATAATACGTTGGTGGGTTGAAAAGAACAAACTCGAGGAACTTCCTCTTGTGGGTTTAGGCGCCTCCTCTGGTGGGTATTTTCTTTCAGTGCTGGCCACTAAGTTGAAGTTTAATAGTATTACTTTGATGATTGCTGAAGGGCTGTATGAACAAATGGAGGTAACAGAGAGATACCCACCTACTCTATTTGTACACATGCCGAAAGATCATTTTAGGCAACAAAAGATCAATGAAAATATGGAGTTTTTGAAAGGTAAAGGAATTGATGTTGCAGAGATTGAATGCTTAGAGTTTGCTCTGTGGCCACATTTTTTGGCTGACCGAATCCCAGGACTTGACAAGAGTGTTTCTGCTAAGTTGTTTGAGCTTTTCCAAGCCAAGGGCTTTGTAGATGGAAATGGAAGGATGCTCAAAGATGGGCGTGCAACACCGTGGAAAGAAGCCCTCAAGACGAGTGGGATTAGTTTACTCGATAATAAGCTAACCAATCACATTCAAGAAGAGTTGAATCTTGCCTTTGCATACCACGAAATGACTAGCTTAGAGACTGACAAGATTTTCACATGGTTTGAATCTCACTTGAGATGA

Coding sequence (CDS)

ATGAGATGTGCTAGACTGAATGTGATTGTCCTAAGAGCTCTAGTTATGGTGAAGCATGGAAACAAATCAAAGGCATGGTACAAACAGCAGACAATCTCGGTTCTTATTGTGTCTGCTTTTCTTATCCTTTTTGTGTTGATGATGTTATTTCGCAAGGAGTCTCAAGAGCGTGATATTTTAGTTGAGGCAACTCCAAAGCAAAAGTGGGATAGCTTCAACTCTCTTGTACAATTTAATCCGAAAAGAGAGTTTCGCAATGGAACTGACATAATATCACAAGTTCCTGGTTCTCCAAAGGCTGTTCTGTTCTTTGCTCATGGCTGCAATGGTAAAGCTGTCAACTTCTGGGACAAATCTCCTGGATGCCCTTCTTGTGTCGGTCTGCCTGAAGAACGGTTGATTGTCCTCCATGCTCTCAGCAGACATTTTGCGGTTCTTACAATATCGAGCTCTCAGAAATGTTGGACATTGGGGAAGGAATTGGCAGTTGTTAAAGACATAATACGTTGGTGGGTTGAAAAGAACAAACTCGAGGAACTTCCTCTTGTGGGTTTAGGCGCCTCCTCTGGTGGGTATTTTCTTTCAGTGCTGGCCACTAAGTTGAAGTTTAATAGTATTACTTTGATGATTGCTGAAGGGCTGTATGAACAAATGGAGGTAACAGAGAGATACCCACCTACTCTATTTGTACACATGCCGAAAGATCATTTTAGGCAACAAAAGATCAATGAAAATATGGAGTTTTTGAAAGGTAAAGGAATTGATGTTGCAGAGATTGAATGCTTAGAGTTTGCTCTGTGGCCACATTTTTTGGCTGACCGAATCCCAGGACTTGACAAGAGTGTTTCTGCTAAGTTGTTTGAGCTTTTCCAAGCCAAGGGCTTTGTAGATGGAAATGGAAGGATGCTCAAAGATGGGCGTGCAACACCGTGGAAAGAAGCCCTCAAGACGAGTGGGATTAGTTTACTCGATAATAAGCTAACCAATCACATTCAAGAAGAGTTGAATCTTGCCTTTGCATACCACGAAATGACTAGCTTAGAGACTGACAAGATTTTCACATGGTTTGAATCTCACTTGAGATGA

Protein sequence

MRCARLNVIVLRALVMVKHGNKSKAWYKQQTISVLIVSAFLILFVLMMLFRKESQERDILVEATPKQKWDSFNSLVQFNPKREFRNGTDIISQVPGSPKAVLFFAHGCNGKAVNFWDKSPGCPSCVGLPEERLIVLHALSRHFAVLTISSSQKCWTLGKELAVVKDIIRWWVEKNKLEELPLVGLGASSGGYFLSVLATKLKFNSITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGIDVAEIECLEFALWPHFLADRIPGLDKSVSAKLFELFQAKGFVDGNGRMLKDGRATPWKEALKTSGISLLDNKLTNHIQEELNLAFAYHEMTSLETDKIFTWFESHLR

Homology

[Close]

BLAST of Lsi10G015420 vs. ExPASy TrEMBL
Match: A0A0A0KH09 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G178940 PE=4 SV=1)

HSP 1 Score: 666.4 bits (1718), Expect = 6.8e-188
Identity = 324/344 (94.19%), Postives = 332/344 (96.51%), Query Frame = 0


Query: 16  MVKHGNKSKAWYKQQTISVLIVSAFLILFVLMMLFRKESQERDILVEATPKQKWDSFNSL 75
           MVKHGNKSKAWYKQQ IS+LIVSAFLILFVLMMLFRKESQE DILVEATPKQKWDSFNSL
Sbjct: 1   MVKHGNKSKAWYKQQKISILIVSAFLILFVLMMLFRKESQEHDILVEATPKQKWDSFNSL 60

Query: 76  VQFNPKREFRNGTDIISQVPGSPKAVLFFAHGCNGKAVNFWDKSPGCPSCVGLPEERLIV 135
           VQFNP REFRNGTDIISQ+P SPK+VLFFAHGCNGKAVNFWD+SP CPSCVGLPEERLIV
Sbjct: 61  VQFNPNREFRNGTDIISQIPDSPKSVLFFAHGCNGKAVNFWDRSPECPSCVGLPEERLIV 120

Query: 136 LHALSRHFAVLTISSSQKCWTLGKELAVVKDIIRWWVEKNKLEELPLVGLGASSGGYFLS 195
           LHALS+HFAVLTISSSQKCWTLGKELAVVKDIIRWWVEKNKLE+LPLVGLGASSGGYFLS
Sbjct: 121 LHALSKHFAVLTISSSQKCWTLGKELAVVKDIIRWWVEKNKLEKLPLVGLGASSGGYFLS 180

Query: 196 VLATKLKFNSITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID 255
           VLATK KF+SITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID
Sbjct: 181 VLATKFKFDSITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID 240

Query: 256 VAEIECLEFALWPHFLADRIPGLDKSVSAKLFELFQAKGFVDGNGRMLKDGRATPWKEAL 315
           VAEIECLEFAL PHFLADRIPGLDKSVSAKLFELFQAKGFVDGNG+MLKDGRAT WKEAL
Sbjct: 241 VAEIECLEFALSPHFLADRIPGLDKSVSAKLFELFQAKGFVDGNGKMLKDGRATRWKEAL 300

Query: 316 KTSGISLLDNKLTNHIQEELNLAFAYHEMTSLETDKIFTWFESH 360
           K SGISL DN LTNHIQEELNLAFAYHEMTSLE DKIFTWFESH
Sbjct: 301 KASGISLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTWFESH 344

[Close]

BLAST of Lsi10G015420 vs. ExPASy TrEMBL
Match: A0A1S3C317 (uncharacterized protein LOC103496322 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496322 PE=4 SV=1)

HSP 1 Score: 661.4 bits (1705), Expect = 2.2e-186
Identity = 322/344 (93.60%), Postives = 331/344 (96.22%), Query Frame = 0


Query: 16  MVKHGNKSKAWYKQQTISVLIVSAFLILFVLMMLFRKESQERDILVEATPKQKWDSFNSL 75
           MVKHGNKSKAWY+QQTISVLIVSAFLILFVLMMLFRKESQERDILVEATPKQKWDSFN L
Sbjct: 6   MVKHGNKSKAWYRQQTISVLIVSAFLILFVLMMLFRKESQERDILVEATPKQKWDSFNYL 65

Query: 76  VQFNPKREFRNGTDIISQVPGSPKAVLFFAHGCNGKAVNFWDKSPGCPSCVGLPEERLIV 135
           VQFNP REF NGTDIISQ+P SPK+VLFFAHGCNGKAVNFWD+SP CPSCVGLPEERLIV
Sbjct: 66  VQFNPNREFCNGTDIISQIPDSPKSVLFFAHGCNGKAVNFWDRSPECPSCVGLPEERLIV 125

Query: 136 LHALSRHFAVLTISSSQKCWTLGKELAVVKDIIRWWVEKNKLEELPLVGLGASSGGYFLS 195
           LHALS+ FAVLTISSSQKCWTLGKELAVVKDIIRWWV KNKLE+LPLVGLGASSGGYFLS
Sbjct: 126 LHALSKRFAVLTISSSQKCWTLGKELAVVKDIIRWWVGKNKLEKLPLVGLGASSGGYFLS 185

Query: 196 VLATKLKFNSITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID 255
           VLATKLKF+SITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID
Sbjct: 186 VLATKLKFDSITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID 245

Query: 256 VAEIECLEFALWPHFLADRIPGLDKSVSAKLFELFQAKGFVDGNGRMLKDGRATPWKEAL 315
           VAEIECLEFALWPHFLADRI GLDK+VSAKLFELFQAKGFVDGNG+MLKDGRAT WKEAL
Sbjct: 246 VAEIECLEFALWPHFLADRISGLDKNVSAKLFELFQAKGFVDGNGKMLKDGRATRWKEAL 305

Query: 316 KTSGISLLDNKLTNHIQEELNLAFAYHEMTSLETDKIFTWFESH 360
           K SGISL DN LTNHIQEELNLAFAYHEMTSLE DKIFTWFESH
Sbjct: 306 KASGISLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTWFESH 349

[Close]

BLAST of Lsi10G015420 vs. ExPASy TrEMBL
Match: A0A5A7UJ28 (Secretion-regulating guanine nucleotide exchange factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22G00080 PE=4 SV=1)

HSP 1 Score: 661.4 bits (1705), Expect = 2.2e-186
Identity = 322/344 (93.60%), Postives = 331/344 (96.22%), Query Frame = 0


Query: 16  MVKHGNKSKAWYKQQTISVLIVSAFLILFVLMMLFRKESQERDILVEATPKQKWDSFNSL 75
           MVKHGNKSKAWY+QQTISVLIVSAFLILFVLMMLFRKESQERDILVEATPKQKWDSFN L
Sbjct: 1   MVKHGNKSKAWYRQQTISVLIVSAFLILFVLMMLFRKESQERDILVEATPKQKWDSFNYL 60

Query: 76  VQFNPKREFRNGTDIISQVPGSPKAVLFFAHGCNGKAVNFWDKSPGCPSCVGLPEERLIV 135
           VQFNP REF NGTDIISQ+P SPK+VLFFAHGCNGKAVNFWD+SP CPSCVGLPEERLIV
Sbjct: 61  VQFNPNREFCNGTDIISQIPDSPKSVLFFAHGCNGKAVNFWDRSPECPSCVGLPEERLIV 120

Query: 136 LHALSRHFAVLTISSSQKCWTLGKELAVVKDIIRWWVEKNKLEELPLVGLGASSGGYFLS 195
           LHALS+ FAVLTISSSQKCWTLGKELAVVKDIIRWWV KNKLE+LPLVGLGASSGGYFLS
Sbjct: 121 LHALSKRFAVLTISSSQKCWTLGKELAVVKDIIRWWVGKNKLEKLPLVGLGASSGGYFLS 180

Query: 196 VLATKLKFNSITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID 255
           VLATKLKF+SITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID
Sbjct: 181 VLATKLKFDSITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID 240

Query: 256 VAEIECLEFALWPHFLADRIPGLDKSVSAKLFELFQAKGFVDGNGRMLKDGRATPWKEAL 315
           VAEIECLEFALWPHFLADRI GLDK+VSAKLFELFQAKGFVDGNG+MLKDGRAT WKEAL
Sbjct: 241 VAEIECLEFALWPHFLADRISGLDKNVSAKLFELFQAKGFVDGNGKMLKDGRATRWKEAL 300

Query: 316 KTSGISLLDNKLTNHIQEELNLAFAYHEMTSLETDKIFTWFESH 360
           K SGISL DN LTNHIQEELNLAFAYHEMTSLE DKIFTWFESH
Sbjct: 301 KASGISLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTWFESH 344

[Close]

BLAST of Lsi10G015420 vs. ExPASy TrEMBL
Match: A0A1S3C4B4 (uncharacterized protein LOC103496322 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496322 PE=4 SV=1)

HSP 1 Score: 661.4 bits (1705), Expect = 2.2e-186
Identity = 322/344 (93.60%), Postives = 331/344 (96.22%), Query Frame = 0


Query: 16  MVKHGNKSKAWYKQQTISVLIVSAFLILFVLMMLFRKESQERDILVEATPKQKWDSFNSL 75
           MVKHGNKSKAWY+QQTISVLIVSAFLILFVLMMLFRKESQERDILVEATPKQKWDSFN L
Sbjct: 1   MVKHGNKSKAWYRQQTISVLIVSAFLILFVLMMLFRKESQERDILVEATPKQKWDSFNYL 60

Query: 76  VQFNPKREFRNGTDIISQVPGSPKAVLFFAHGCNGKAVNFWDKSPGCPSCVGLPEERLIV 135
           VQFNP REF NGTDIISQ+P SPK+VLFFAHGCNGKAVNFWD+SP CPSCVGLPEERLIV
Sbjct: 61  VQFNPNREFCNGTDIISQIPDSPKSVLFFAHGCNGKAVNFWDRSPECPSCVGLPEERLIV 120

Query: 136 LHALSRHFAVLTISSSQKCWTLGKELAVVKDIIRWWVEKNKLEELPLVGLGASSGGYFLS 195
           LHALS+ FAVLTISSSQKCWTLGKELAVVKDIIRWWV KNKLE+LPLVGLGASSGGYFLS
Sbjct: 121 LHALSKRFAVLTISSSQKCWTLGKELAVVKDIIRWWVGKNKLEKLPLVGLGASSGGYFLS 180

Query: 196 VLATKLKFNSITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID 255
           VLATKLKF+SITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID
Sbjct: 181 VLATKLKFDSITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID 240

Query: 256 VAEIECLEFALWPHFLADRIPGLDKSVSAKLFELFQAKGFVDGNGRMLKDGRATPWKEAL 315
           VAEIECLEFALWPHFLADRI GLDK+VSAKLFELFQAKGFVDGNG+MLKDGRAT WKEAL
Sbjct: 241 VAEIECLEFALWPHFLADRISGLDKNVSAKLFELFQAKGFVDGNGKMLKDGRATRWKEAL 300

Query: 316 KTSGISLLDNKLTNHIQEELNLAFAYHEMTSLETDKIFTWFESH 360
           K SGISL DN LTNHIQEELNLAFAYHEMTSLE DKIFTWFESH
Sbjct: 301 KASGISLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTWFESH 344

[Close]

BLAST of Lsi10G015420 vs. ExPASy TrEMBL
Match: A0A1S3C2M7 (uncharacterized protein LOC103496322 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496322 PE=4 SV=1)

HSP 1 Score: 652.9 bits (1683), Expect = 7.8e-184
Identity = 318/340 (93.53%), Postives = 327/340 (96.18%), Query Frame = 0


Query: 16  MVKHGNKSKAWYKQQTISVLIVSAFLILFVLMMLFRKESQERDILVEATPKQKWDSFNSL 75
           MVKHGNKSKAWY+QQTISVLIVSAFLILFVLMMLFRKESQERDILVEATPKQKWDSFN L
Sbjct: 6   MVKHGNKSKAWYRQQTISVLIVSAFLILFVLMMLFRKESQERDILVEATPKQKWDSFNYL 65

Query: 76  VQFNPKREFRNGTDIISQVPGSPKAVLFFAHGCNGKAVNFWDKSPGCPSCVGLPEERLIV 135
           VQFNP REF NGTDIISQ+P SPK+VLFFAHGCNGKAVNFWD+SP CPSCVGLPEERLIV
Sbjct: 66  VQFNPNREFCNGTDIISQIPDSPKSVLFFAHGCNGKAVNFWDRSPECPSCVGLPEERLIV 125

Query: 136 LHALSRHFAVLTISSSQKCWTLGKELAVVKDIIRWWVEKNKLEELPLVGLGASSGGYFLS 195
           LHALS+ FAVLTISSSQKCWTLGKELAVVKDIIRWWV KNKLE+LPLVGLGASSGGYFLS
Sbjct: 126 LHALSKRFAVLTISSSQKCWTLGKELAVVKDIIRWWVGKNKLEKLPLVGLGASSGGYFLS 185

Query: 196 VLATKLKFNSITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID 255
           VLATKLKF+SITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID
Sbjct: 186 VLATKLKFDSITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID 245

Query: 256 VAEIECLEFALWPHFLADRIPGLDKSVSAKLFELFQAKGFVDGNGRMLKDGRATPWKEAL 315
           VAEIECLEFALWPHFLADRI GLDK+VSAKLFELFQAKGFVDGNG+MLKDGRAT WKEAL
Sbjct: 246 VAEIECLEFALWPHFLADRISGLDKNVSAKLFELFQAKGFVDGNGKMLKDGRATRWKEAL 305

Query: 316 KTSGISLLDNKLTNHIQEELNLAFAYHEMTSLETDKIFTW 356
           K SGISL DN LTNHIQEELNLAFAYHEMTSLE DKIFTW
Sbjct: 306 KASGISLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTW 345

[Close]

BLAST of Lsi10G015420 vs. NCBI nr
Match: XP_038900369.1 (uncharacterized protein LOC120087612 [Benincasa hispida] >XP_038900370.1 uncharacterized protein LOC120087612 [Benincasa hispida])

HSP 1 Score: 670.6 bits (1729), Expect = 7.5e-189
Identity = 328/346 (94.80%), Postives = 333/346 (96.24%), Query Frame = 0


Query: 16  MVKHGNKSKAWYKQQTISVLIVSAFLILFVLMMLFRKESQERDILVEATPKQKWDSFNSL 75
           MVK+GNKSKAWYKQQTISVLIVSAFLILFVLMM FRKESQE DILVE TPKQKWDSFNSL
Sbjct: 1   MVKYGNKSKAWYKQQTISVLIVSAFLILFVLMMSFRKESQEHDILVEVTPKQKWDSFNSL 60

Query: 76  VQFNPKREFRNGTDIISQVPGSPKAVLFFAHGCNGKAVNFWDKSPGCPSCVGLPEERLIV 135
           VQFNPKREF NGTDIISQ+P SPKAVLFFAHGCNGKAVNFWDKSP CPSCVGLPEERLIV
Sbjct: 61  VQFNPKREFYNGTDIISQIPDSPKAVLFFAHGCNGKAVNFWDKSPDCPSCVGLPEERLIV 120

Query: 136 LHALSRHFAVLTISSSQKCWTLGKELAVVKDIIRWWVEKNKLEELPLVGLGASSGGYFLS 195
           LHALSRHFAVLTISSSQKCWTLGKELAVVKDIIRWWVEKNKLE+LPLVGLGASSGGYF+S
Sbjct: 121 LHALSRHFAVLTISSSQKCWTLGKELAVVKDIIRWWVEKNKLEKLPLVGLGASSGGYFIS 180

Query: 196 VLATKLKFNSITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID 255
           VLATKLKFNSITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID
Sbjct: 181 VLATKLKFNSITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID 240

Query: 256 VAEIECLEFALWPHFLADRIPGLDKSVSAKLFELFQAKGFVDGNGRMLKDGRATPWKEAL 315
           VAEIEC EFAL PHFLADRIPGLDK VSAKLFELFQAKGFVDGNGRMLKDGRAT WKEAL
Sbjct: 241 VAEIECSEFALSPHFLADRIPGLDKGVSAKLFELFQAKGFVDGNGRMLKDGRATRWKEAL 300

Query: 316 KTSGISLLDNKLTNHIQEELNLAFAYHEMTSLETDKIFTWFESHLR 362
           KTSGISL DN LTNHIQEELNLAFAYHEMTSLE DKIFTWFESHL+
Sbjct: 301 KTSGISLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTWFESHLK 346

[Close]

BLAST of Lsi10G015420 vs. NCBI nr
Match: XP_004143176.1 (uncharacterized protein LOC101217366 [Cucumis sativus] >XP_011657110.1 uncharacterized protein LOC101217366 [Cucumis sativus] >XP_031743446.1 uncharacterized protein LOC101217366 [Cucumis sativus] >XP_031743447.1 uncharacterized protein LOC101217366 [Cucumis sativus])

HSP 1 Score: 666.4 bits (1718), Expect = 1.4e-187
Identity = 324/344 (94.19%), Postives = 332/344 (96.51%), Query Frame = 0


Query: 16  MVKHGNKSKAWYKQQTISVLIVSAFLILFVLMMLFRKESQERDILVEATPKQKWDSFNSL 75
           MVKHGNKSKAWYKQQ IS+LIVSAFLILFVLMMLFRKESQE DILVEATPKQKWDSFNSL
Sbjct: 1   MVKHGNKSKAWYKQQKISILIVSAFLILFVLMMLFRKESQEHDILVEATPKQKWDSFNSL 60

Query: 76  VQFNPKREFRNGTDIISQVPGSPKAVLFFAHGCNGKAVNFWDKSPGCPSCVGLPEERLIV 135
           VQFNP REFRNGTDIISQ+P SPK+VLFFAHGCNGKAVNFWD+SP CPSCVGLPEERLIV
Sbjct: 61  VQFNPNREFRNGTDIISQIPDSPKSVLFFAHGCNGKAVNFWDRSPECPSCVGLPEERLIV 120

Query: 136 LHALSRHFAVLTISSSQKCWTLGKELAVVKDIIRWWVEKNKLEELPLVGLGASSGGYFLS 195
           LHALS+HFAVLTISSSQKCWTLGKELAVVKDIIRWWVEKNKLE+LPLVGLGASSGGYFLS
Sbjct: 121 LHALSKHFAVLTISSSQKCWTLGKELAVVKDIIRWWVEKNKLEKLPLVGLGASSGGYFLS 180

Query: 196 VLATKLKFNSITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID 255
           VLATK KF+SITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID
Sbjct: 181 VLATKFKFDSITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID 240

Query: 256 VAEIECLEFALWPHFLADRIPGLDKSVSAKLFELFQAKGFVDGNGRMLKDGRATPWKEAL 315
           VAEIECLEFAL PHFLADRIPGLDKSVSAKLFELFQAKGFVDGNG+MLKDGRAT WKEAL
Sbjct: 241 VAEIECLEFALSPHFLADRIPGLDKSVSAKLFELFQAKGFVDGNGKMLKDGRATRWKEAL 300

Query: 316 KTSGISLLDNKLTNHIQEELNLAFAYHEMTSLETDKIFTWFESH 360
           K SGISL DN LTNHIQEELNLAFAYHEMTSLE DKIFTWFESH
Sbjct: 301 KASGISLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTWFESH 344

[Close]

BLAST of Lsi10G015420 vs. NCBI nr
Match: XP_008456361.1 (PREDICTED: uncharacterized protein LOC103496322 isoform X2 [Cucumis melo] >KAA0054577.1 Secretion-regulating guanine nucleotide exchange factor [Cucumis melo var. makuwa] >TYK27541.1 Secretion-regulating guanine nucleotide exchange factor [Cucumis melo var. makuwa])

HSP 1 Score: 661.4 bits (1705), Expect = 4.5e-186
Identity = 322/344 (93.60%), Postives = 331/344 (96.22%), Query Frame = 0


Query: 16  MVKHGNKSKAWYKQQTISVLIVSAFLILFVLMMLFRKESQERDILVEATPKQKWDSFNSL 75
           MVKHGNKSKAWY+QQTISVLIVSAFLILFVLMMLFRKESQERDILVEATPKQKWDSFN L
Sbjct: 1   MVKHGNKSKAWYRQQTISVLIVSAFLILFVLMMLFRKESQERDILVEATPKQKWDSFNYL 60

Query: 76  VQFNPKREFRNGTDIISQVPGSPKAVLFFAHGCNGKAVNFWDKSPGCPSCVGLPEERLIV 135
           VQFNP REF NGTDIISQ+P SPK+VLFFAHGCNGKAVNFWD+SP CPSCVGLPEERLIV
Sbjct: 61  VQFNPNREFCNGTDIISQIPDSPKSVLFFAHGCNGKAVNFWDRSPECPSCVGLPEERLIV 120

Query: 136 LHALSRHFAVLTISSSQKCWTLGKELAVVKDIIRWWVEKNKLEELPLVGLGASSGGYFLS 195
           LHALS+ FAVLTISSSQKCWTLGKELAVVKDIIRWWV KNKLE+LPLVGLGASSGGYFLS
Sbjct: 121 LHALSKRFAVLTISSSQKCWTLGKELAVVKDIIRWWVGKNKLEKLPLVGLGASSGGYFLS 180

Query: 196 VLATKLKFNSITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID 255
           VLATKLKF+SITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID
Sbjct: 181 VLATKLKFDSITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID 240

Query: 256 VAEIECLEFALWPHFLADRIPGLDKSVSAKLFELFQAKGFVDGNGRMLKDGRATPWKEAL 315
           VAEIECLEFALWPHFLADRI GLDK+VSAKLFELFQAKGFVDGNG+MLKDGRAT WKEAL
Sbjct: 241 VAEIECLEFALWPHFLADRISGLDKNVSAKLFELFQAKGFVDGNGKMLKDGRATRWKEAL 300

Query: 316 KTSGISLLDNKLTNHIQEELNLAFAYHEMTSLETDKIFTWFESH 360
           K SGISL DN LTNHIQEELNLAFAYHEMTSLE DKIFTWFESH
Sbjct: 301 KASGISLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTWFESH 344

[Close]

BLAST of Lsi10G015420 vs. NCBI nr
Match: XP_008456356.1 (PREDICTED: uncharacterized protein LOC103496322 isoform X1 [Cucumis melo] >XP_008456358.1 PREDICTED: uncharacterized protein LOC103496322 isoform X1 [Cucumis melo] >XP_008456359.1 PREDICTED: uncharacterized protein LOC103496322 isoform X1 [Cucumis melo] >XP_008456360.1 PREDICTED: uncharacterized protein LOC103496322 isoform X1 [Cucumis melo])

HSP 1 Score: 661.4 bits (1705), Expect = 4.5e-186
Identity = 322/344 (93.60%), Postives = 331/344 (96.22%), Query Frame = 0


Query: 16  MVKHGNKSKAWYKQQTISVLIVSAFLILFVLMMLFRKESQERDILVEATPKQKWDSFNSL 75
           MVKHGNKSKAWY+QQTISVLIVSAFLILFVLMMLFRKESQERDILVEATPKQKWDSFN L
Sbjct: 6   MVKHGNKSKAWYRQQTISVLIVSAFLILFVLMMLFRKESQERDILVEATPKQKWDSFNYL 65

Query: 76  VQFNPKREFRNGTDIISQVPGSPKAVLFFAHGCNGKAVNFWDKSPGCPSCVGLPEERLIV 135
           VQFNP REF NGTDIISQ+P SPK+VLFFAHGCNGKAVNFWD+SP CPSCVGLPEERLIV
Sbjct: 66  VQFNPNREFCNGTDIISQIPDSPKSVLFFAHGCNGKAVNFWDRSPECPSCVGLPEERLIV 125

Query: 136 LHALSRHFAVLTISSSQKCWTLGKELAVVKDIIRWWVEKNKLEELPLVGLGASSGGYFLS 195
           LHALS+ FAVLTISSSQKCWTLGKELAVVKDIIRWWV KNKLE+LPLVGLGASSGGYFLS
Sbjct: 126 LHALSKRFAVLTISSSQKCWTLGKELAVVKDIIRWWVGKNKLEKLPLVGLGASSGGYFLS 185

Query: 196 VLATKLKFNSITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID 255
           VLATKLKF+SITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID
Sbjct: 186 VLATKLKFDSITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID 245

Query: 256 VAEIECLEFALWPHFLADRIPGLDKSVSAKLFELFQAKGFVDGNGRMLKDGRATPWKEAL 315
           VAEIECLEFALWPHFLADRI GLDK+VSAKLFELFQAKGFVDGNG+MLKDGRAT WKEAL
Sbjct: 246 VAEIECLEFALWPHFLADRISGLDKNVSAKLFELFQAKGFVDGNGKMLKDGRATRWKEAL 305

Query: 316 KTSGISLLDNKLTNHIQEELNLAFAYHEMTSLETDKIFTWFESH 360
           K SGISL DN LTNHIQEELNLAFAYHEMTSLE DKIFTWFESH
Sbjct: 306 KASGISLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTWFESH 349

[Close]

BLAST of Lsi10G015420 vs. NCBI nr
Match: KAE8646937.1 (hypothetical protein Csa_020844 [Cucumis sativus])

HSP 1 Score: 657.9 bits (1696), Expect = 5.0e-185
Identity = 320/340 (94.12%), Postives = 328/340 (96.47%), Query Frame = 0


Query: 16  MVKHGNKSKAWYKQQTISVLIVSAFLILFVLMMLFRKESQERDILVEATPKQKWDSFNSL 75
           MVKHGNKSKAWYKQQ IS+LIVSAFLILFVLMMLFRKESQE DILVEATPKQKWDSFNSL
Sbjct: 1   MVKHGNKSKAWYKQQKISILIVSAFLILFVLMMLFRKESQEHDILVEATPKQKWDSFNSL 60

Query: 76  VQFNPKREFRNGTDIISQVPGSPKAVLFFAHGCNGKAVNFWDKSPGCPSCVGLPEERLIV 135
           VQFNP REFRNGTDIISQ+P SPK+VLFFAHGCNGKAVNFWD+SP CPSCVGLPEERLIV
Sbjct: 61  VQFNPNREFRNGTDIISQIPDSPKSVLFFAHGCNGKAVNFWDRSPECPSCVGLPEERLIV 120

Query: 136 LHALSRHFAVLTISSSQKCWTLGKELAVVKDIIRWWVEKNKLEELPLVGLGASSGGYFLS 195
           LHALS+HFAVLTISSSQKCWTLGKELAVVKDIIRWWVEKNKLE+LPLVGLGASSGGYFLS
Sbjct: 121 LHALSKHFAVLTISSSQKCWTLGKELAVVKDIIRWWVEKNKLEKLPLVGLGASSGGYFLS 180

Query: 196 VLATKLKFNSITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID 255
           VLATK KF+SITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID
Sbjct: 181 VLATKFKFDSITLMIAEGLYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGID 240

Query: 256 VAEIECLEFALWPHFLADRIPGLDKSVSAKLFELFQAKGFVDGNGRMLKDGRATPWKEAL 315
           VAEIECLEFAL PHFLADRIPGLDKSVSAKLFELFQAKGFVDGNG+MLKDGRAT WKEAL
Sbjct: 241 VAEIECLEFALSPHFLADRIPGLDKSVSAKLFELFQAKGFVDGNGKMLKDGRATRWKEAL 300

Query: 316 KTSGISLLDNKLTNHIQEELNLAFAYHEMTSLETDKIFTW 356
           K SGISL DN LTNHIQEELNLAFAYHEMTSLE DKIFTW
Sbjct: 301 KASGISLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTW 340

[Close]

BLAST of Lsi10G015420 vs. TAIR 10
Match: AT3G58800.1 (unknown protein; Has 75 Blast hits to 75 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 17; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 381.7 bits (979), Expect = 6.5e-106
Identity = 188/327 (57.49%), Postives = 245/327 (74.92%), Query Frame = 0


Query: 34  VLIVSAFLILFVLMMLFRKESQERDILVEATPKQKWDSFNSLVQFNPKREFRNGTDIISQ 93
           V +V  FL++ VL+  F  ++Q   + +   PKQ  ++    +Q  P  E +N T +I  
Sbjct: 22  VFVVGIFLVV-VLLFCFSGKNQSTKMQL---PKQISNNVKPELQSQPTLEIQNETQLIWT 81

Query: 94  VPGSPKAVLFFAHGCNGKAVNFWDKSPGCPSCVGLPEERLIVLHALSRHFAVLTISSSQK 153
           +P SPKAVLF AHGC+ KA +FWDKS  CP C GLPEER+++  AL+R FAVLT+SS+  
Sbjct: 82  IPNSPKAVLFIAHGCHRKASDFWDKSSDCPQCTGLPEERILMRFALARKFAVLTVSSTGT 141

Query: 154 CWTLGKELAVVKDIIRWWVEKNKLEELPLVGLGASSGGYFLSVLATKLKFNSITLMIAEG 213
           CWT GKE  +V  II+ WVEK+KLE LPLV LGASSGGYF+S LAT+++F+SI LMIAEG
Sbjct: 142 CWTFGKEKTIVGSIIKSWVEKHKLERLPLVALGASSGGYFVSALATEMQFSSIVLMIAEG 201

Query: 214 LYEQMEVTERYPPTLFVHMPKDHFRQQKINENMEFLKGKGIDVAEIECLEFALWPHFLAD 273
           +++Q+ ++++YPPTLFVHMPKD +RQQKI E +E L+ +GID AEIECL+  + P FLAD
Sbjct: 202 VFDQISISKQYPPTLFVHMPKDVYRQQKIREFLEGLRMEGIDAAEIECLDLPISPDFLAD 261

Query: 274 RIPGLDKSVSAKLFELFQAKGFVDGNGRMLKDGRATPWKEALKTSGISLLDNKLTNHIQE 333
           RIPGLD  VSAKLF+LF+ KGFVD  G M +DGR TPWK+AL    IS L+  L   ++E
Sbjct: 262 RIPGLDSDVSAKLFKLFRDKGFVDEKGYMKRDGRRTPWKQALSGYKIS-LEQSLITPVEE 321

Query: 334 ELNLAFAYHEMTSLETDKIFTWFESHL 361
           ELNLA+AYHEMTSL++D+IF+WFESH+
Sbjct: 322 ELNLAYAYHEMTSLQSDQIFSWFESHM 343

The following BLAST results are available for this feature:

BLAST of Lsi10G015420 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi10G015420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KH09	6.8e-188	94.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G178940 PE=4 SV=1	[more]
A0A1S3C317	2.2e-186	93.60	uncharacterized protein LOC103496322 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7UJ28	2.2e-186	93.60	Secretion-regulating guanine nucleotide exchange factor OS=Cucumis melo var. mak...	[more]
A0A1S3C4B4	2.2e-186	93.60	uncharacterized protein LOC103496322 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3C2M7	7.8e-184	93.53	uncharacterized protein LOC103496322 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Lsi10G015420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900369.1	7.5e-189	94.80	uncharacterized protein LOC120087612 [Benincasa hispida] >XP_038900370.1 unchara...	[more]
XP_004143176.1	1.4e-187	94.19	uncharacterized protein LOC101217366 [Cucumis sativus] >XP_011657110.1 uncharact...	[more]
XP_008456361.1	4.5e-186	93.60	PREDICTED: uncharacterized protein LOC103496322 isoform X2 [Cucumis melo] >KAA00...	[more]
XP_008456356.1	4.5e-186	93.60	PREDICTED: uncharacterized protein LOC103496322 isoform X1 [Cucumis melo] >XP_00...	[more]
KAE8646937.1	5.0e-185	94.12	hypothetical protein Csa_020844 [Cucumis sativus]	[more]

BLAST of Lsi10G015420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58800.1	6.5e-106	57.49	unknown protein; Has 75 Blast hits to 75 proteins in 23 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029058	Alpha/Beta hydrolase fold	GENE3D	3.40.50.1820	alpha/beta hydrolase	coord: 92..273 e-value: 5.2E-5 score: 25.2
IPR029058	Alpha/Beta hydrolase fold	SUPERFAMILY	53474	alpha/beta-Hydrolases	coord: 35..209
None	No IPR available	PANTHER	PTHR35128	SECRETION-REGULATING GUANINE NUCLEOTIDE EXCHANGE FACTOR	coord: 17..360

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G015420.1	Lsi10G015420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane