Lsi10G012990 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G012990
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	tetraspanin-3-like
Location	chr10: 17201528 .. 17204455 (-)
RNA-Seq Expression	Lsi10G012990
Synteny	Lsi10G012990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATTGGAAATGAAAACTCAGCTTTTTTTGAGGCGAAACTTTCGCTGACCGACATGTCGGCTCGGTCCATGCAAACCAACACAATCACACTCTCAGCGTCAGCGACCTTCCCATAAAACTGCATTATACACTTTCTTTATAGCCCCACACCCTTTTCCCACTCTTCCAACCTGCTCCTTCCATTTACATTCTTCTTCTTCTTCTTCTTCACAAATCCATCTTCCTCCATTTCCAGCACCCAGATCAGAAAAACCCATAAACCAATACCCCATTTCAGTATGAGAACTAGCAACCATTTGATTGGCTTACTCAACTTCCTCACTTTCGTGCTCTCAATCCCGATCCTCGCCGGCGGGATATGGCTCAGCAGCAAAGCCAACAGCACCGAGTGTCTCAGATTCCTTCAGTGGCCTTTGATCATAATCGGAGTTGCGATCATGGTTGTTTCACTCGCTGGATTTGCCGGCGCGTGTTACAGGAACACTTTTCTCATGTGGCTTTACCTCTTTGTTATGTTCTTCGTCATCGTTGCTCTGATTGTGTTTATTGTCTTTGCTTATGCTGTCACTGATAAAGGCTCTGGCCAGACCGTTCCCAGTAGGGCGTATTTGGATTATTATCTTCAGGATTATTCCGGTTGGTTGAAGGATCGAGTTGCAGAGGAGAGCTATTGGGGTAAAATCAGTTCGTGTATTAGGGACTCTAAGGTTTGTAAGAAGATGGGAAGAATTGTTGGTGGTGTTCCTGAAACTTCTGAAATGTTTAATCTCAGGAAGCTCAGCCCTATTGAGGTATTGTTTTGCTGTGATTTTGATTTTTGTTTTCATTTGATGTTCTTCAGAGGGATAAATTGTTTATTGATATGATATGTTTTCCCCTGTTTATTGATTTGTTTGATAATAATTGGAAGTGGATTTGTTGGGTTTAGAGTAAGATTTCTGATGAATCCACTCTCCCTTTTTGGGTTTGCAAAAAAGTTGAAATCAGAGGGAATAGAATAGGAAGGGAGAGTGGAAAGGCACTTTTAGGTGGTTCTGACTTCTAATTGATTTAAGGTTTCTAATATTAAATAGGAAAGCTAAACTCAAGGAAGTTTTTCTGGTTGCTTTTTCATGGTGGATTGCAATTTGCAAACTCTATTAATTTACTCACTGGGGATGGCTTTTGGTGGTGCAAATGCAAACTACCTTTTTCCCTCTTTAAAAGTTGCCTGTTTCATTACTTTTTCCTCTTAAGGTTGGCCTAAGTGAAAAAGAGTTCATTATTATTGCAAGTTTTCTTCTGGGGTGGAGGTTTTCAACTTCAATTATCTAAAAATCCCCCAACAGTCGCCAAAGAAAGGATGAATGAATCATTTAGAACACAATCCTGTTGTTGCAACCAATGCACTTTGACACGGTGGACACTGCGATTGCTTTGAGAAAAAAATGAATTAAAACCAGAAAAACCATCTAGTTTTTGGGGGCGAAAAGCTTTTCCTTAACTATTTTGTATGTTCTGGCATCAATTTGACAGTTTTCGTTTGTTAGATCGATATACGTCGCTTTCCCCTTTCATCTGTGATAGCAGTGTCTGCTGGATTTGTAAGTTTGTTTGTCTTTTGAAGTTACTTTACCCTTGGAACATCCTTCTCTTTTGGTGGGTCTTTTGCTTTGTATGTTGGATTAGAATAGAAGTCAAAGCCATCTGGTGAAGTTACTCTGAAACTTTTATCAGTCAGACAATTGAGGATGGAGGGAATCTTCCTCCAGTTTCTCTCAGCTTTTCTGCTCTTTTTCTATTTGTTTTATATGATATAAAATGGTTTTTTTTTGTTTTTTTAATAACCGGGTCATATTCTTTGTTTTATGCTCATGCTCATGAGCCAACTCACTAATTTCTGGGAAGCTTCACCCATTCCTCCCACATCAGGTCTAAGGGGCAATCGTGAGTTAAATTATTTATGTTTGTTTGATTACCATTTGGCTTTTGAAAATTAAGCCTATAAGCACGATAACTACTTGGGTTTTTGAAAATTAAGCTTATAAACACTACTTCCACCTATCAATTTTTTTTGTTTTGTTATCTAATTTTTAGGAGTGTTTAAAAAAATAAGCCAAGTTTCGAAAAGTAAAAGAAAGAAAAGTAGTTTTCAAAAGTTTGTTTTTGGAAATTGGAATTTGGCTAGAATTCAAATGTTAGGAAAAAAAACCATGGTAAATAAGTTGTAAAATAAGCACAATTTTCAAAATCTAAAAACTAAAGTATTAGCAAACGAGACTTTTAGTTTCGTACTTGGAACTTTAACCAAAGTCTTTGACCAAGAAAACAAAACCTAATATAAAAGAGAGTTGTATAAAAAGAAAATGCGCAGTTAAGACAAGGACCTTCGTGACCTGGATGATTACATTAAATTGGTGTATAATATGCAATAATTTAACATGTTCCTCGTGAATTGATTCTGTTATTCATAAGAATCATGACTTTAAATATTAACTCTTGCACCTGATGGCTGAGAGTAATGTTCTGAAAGATATATGTTAAGTGTTGTCTTAATATCCATTCTTTTGAGAATCTGAATGTTTTCAATTTGGTTTGTTCAGTCTGGTTGCTGTAAGCCTCCTACAGATTGTGGCTTTGTCTATCAAAATGAGACTGTATGGACTGGTGTAGAAGGGATGGTGCTCGTCAATCCAGACTGCACGAAGTGGAACAACGATCAAGCAGAGCTCTGTTACGACTGCAACTCTTGTAAAGCAGGCGTGCTGGCCAGCCTCAAGAGGAGCTGGAGGAAAGTCTCGATTATTAACATCGTCGTCTTGATCATTCTGGTGATTGCTTATGTCATTGGCATTGCAGCATTCAGGAACAACCGACGCATCGATAACGAAGAAGCCTCCGGGGAAGCGCGGATGGAAAAGGCACGACCCAGCTGGATTCATTCTTAA

mRNA sequence

CAAATTGGAAATGAAAACTCAGCTTTTTTTGAGGCGAAACTTTCGCTGACCGACATGTCGGCTCGGTCCATGCAAACCAACACAATCACACTCTCAGCGTCAGCGACCTTCCCATAAAACTGCATTATACACTTTCTTTATAGCCCCACACCCTTTTCCCACTCTTCCAACCTGCTCCTTCCATTTACATTCTTCTTCTTCTTCTTCTTCACAAATCCATCTTCCTCCATTTCCAGCACCCAGATCAGAAAAACCCATAAACCAATACCCCATTTCAGTATGAGAACTAGCAACCATTTGATTGGCTTACTCAACTTCCTCACTTTCGTGCTCTCAATCCCGATCCTCGCCGGCGGGATATGGCTCAGCAGCAAAGCCAACAGCACCGAGTGTCTCAGATTCCTTCAGTGGCCTTTGATCATAATCGGAGTTGCGATCATGGTTGTTTCACTCGCTGGATTTGCCGGCGCGTGTTACAGGAACACTTTTCTCATGTGGCTTTACCTCTTTGTTATGTTCTTCGTCATCGTTGCTCTGATTGTGTTTATTGTCTTTGCTTATGCTGTCACTGATAAAGGCTCTGGCCAGACCGTTCCCAGTAGGGCGTATTTGGATTATTATCTTCAGGATTATTCCGGTTGGTTGAAGGATCGAGTTGCAGAGGAGAGCTATTGGGGTAAAATCAGTTCGTGTATTAGGGACTCTAAGGTTTGTAAGAAGATGGGAAGAATTGTTGGTGGTGTTCCTGAAACTTCTGAAATGTTTAATCTCAGGAAGCTCAGCCCTATTGAGATCGATATACGTCGCTTTCCCCTTTCATCTGTGATAGCAGTGTCTGCTGGATTTTCTGGTTGCTGTAAGCCTCCTACAGATTGTGGCTTTGTCTATCAAAATGAGACTGTATGGACTGGTGTAGAAGGGATGGTGCTCGTCAATCCAGACTGCACGAAGTGGAACAACGATCAAGCAGAGCTCTGTTACGACTGCAACTCTTGTAAAGCAGGCGTGCTGGCCAGCCTCAAGAGGAGCTGGAGGAAAGTCTCGATTATTAACATCGTCGTCTTGATCATTCTGGTGATTGCTTATGTCATTGGCATTGCAGCATTCAGGAACAACCGACGCATCGATAACGAAGAAGCCTCCGGGGAAGCGCGGATGGAAAAGGCACGACCCAGCTGGATTCATTCTTAA

Coding sequence (CDS)

ATGAGAACTAGCAACCATTTGATTGGCTTACTCAACTTCCTCACTTTCGTGCTCTCAATCCCGATCCTCGCCGGCGGGATATGGCTCAGCAGCAAAGCCAACAGCACCGAGTGTCTCAGATTCCTTCAGTGGCCTTTGATCATAATCGGAGTTGCGATCATGGTTGTTTCACTCGCTGGATTTGCCGGCGCGTGTTACAGGAACACTTTTCTCATGTGGCTTTACCTCTTTGTTATGTTCTTCGTCATCGTTGCTCTGATTGTGTTTATTGTCTTTGCTTATGCTGTCACTGATAAAGGCTCTGGCCAGACCGTTCCCAGTAGGGCGTATTTGGATTATTATCTTCAGGATTATTCCGGTTGGTTGAAGGATCGAGTTGCAGAGGAGAGCTATTGGGGTAAAATCAGTTCGTGTATTAGGGACTCTAAGGTTTGTAAGAAGATGGGAAGAATTGTTGGTGGTGTTCCTGAAACTTCTGAAATGTTTAATCTCAGGAAGCTCAGCCCTATTGAGATCGATATACGTCGCTTTCCCCTTTCATCTGTGATAGCAGTGTCTGCTGGATTTTCTGGTTGCTGTAAGCCTCCTACAGATTGTGGCTTTGTCTATCAAAATGAGACTGTATGGACTGGTGTAGAAGGGATGGTGCTCGTCAATCCAGACTGCACGAAGTGGAACAACGATCAAGCAGAGCTCTGTTACGACTGCAACTCTTGTAAAGCAGGCGTGCTGGCCAGCCTCAAGAGGAGCTGGAGGAAAGTCTCGATTATTAACATCGTCGTCTTGATCATTCTGGTGATTGCTTATGTCATTGGCATTGCAGCATTCAGGAACAACCGACGCATCGATAACGAAGAAGCCTCCGGGGAAGCGCGGATGGAAAAGGCACGACCCAGCTGGATTCATTCTTAA

Protein sequence

MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAGFAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGQTVPSRAYLDYYLQDYSGWLKDRVAEESYWGKISSCIRDSKVCKKMGRIVGGVPETSEMFNLRKLSPIEIDIRRFPLSSVIAVSAGFSGCCKPPTDCGFVYQNETVWTGVEGMVLVNPDCTKWNNDQAELCYDCNSCKAGVLASLKRSWRKVSIINIVVLIILVIAYVIGIAAFRNNRRIDNEEASGEARMEKARPSWIHS

Homology

[Close]

BLAST of Lsi10G012990 vs. ExPASy Swiss-Prot
Match: Q9M1E7 (Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 1.4e-119
Identity = 212/302 (70.20%), Postives = 245/302 (81.13%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MRTSNHLIGL+NFLTF+LSIPIL GGIWLSS+ANST+CLRFLQWPLI+IG++IMVVSLAG
Sbjct: 1   MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGQTVPSRAYLDYYLQDYSG 120
           FAGACYRN FLMWLYL VM  +I ALI FI+FAYAVTDKGSG+TV +R YLDYYL+DYSG
Sbjct: 61  FAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSKVCKKMGRIVGGVPETSEMFNLRKLSPIEIDIRRFPLS 180
           WLKDRV+++SYWGKISSC+RDS  C+K+GR   GVPET++MF LR+LSP+E         
Sbjct: 121 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVE--------- 180

Query: 181 SVIAVSAGFSGCCKPPTDCGFVYQNETVWTGVEGMVLVNPDCTKWNNDQAELCYDCNSCK 240
                    SGCCKPPTDCGF Y NET W    GM+  N DC  W+NDQ+ LCY C+SCK
Sbjct: 181 ---------SGCCKPPTDCGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCK 240

Query: 241 AGVLASLKRSWRKVSIINIVVLIILVIAYVIGIAAFRNNRRIDNEEASGEARMEKARPSW 300
           AGVL SLK+SWRKVS+INIVVLIILVI YVI  AA+RN +RIDN+E +GEARM K+ PS 
Sbjct: 241 AGVLGSLKKSWRKVSVINIVVLIILVIFYVIAYAAYRNVKRIDNDEPAGEARMTKSHPSH 284

Query: 301 IH 303
            H
Sbjct: 301 FH 284

[Close]

BLAST of Lsi10G012990 vs. ExPASy Swiss-Prot
Match: Q9LSS4 (Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 8.7e-109
Identity = 196/293 (66.89%), Postives = 226/293 (77.13%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MR+ ++LIGL+NF TF+LSIPIL GGIWLSS+ANST+CLRFLQWPLIIIG++IMV+SLAG
Sbjct: 1   MRSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGQTVPSRAYLDYYLQDYSG 120
            AGACY+N FLMWLYLF MFFVI ALI F +FAY VTDKGSG+ V +R YLDYYL DYSG
Sbjct: 61  IAGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSKVCKKMGRIVGGVPETSEMFNLRKLSPIEIDIRRFPLS 180
           WLKDRV +  YW  I SC+RDS VCKK+GR + GVPET+ MF  R LSP+E         
Sbjct: 121 WLKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVE--------- 180

Query: 181 SVIAVSAGFSGCCKPPTDCGFVYQNETVWTGVEGMVLVNPDCTKWNNDQAELCYDCNSCK 240
                    SGCCKPPTDCG+ Y NETVW     MV  NPDC  WNNDQ  LCY C+SCK
Sbjct: 181 ---------SGCCKPPTDCGYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCK 240

Query: 241 AGVLASLKRSWRKVSIINIVVLIILVIAYVIGIAAFRNNRRIDNEEASGEARM 294
           AGVL SLK+SWRKVS+INIVV+IILVI YVI  AA++N +R+ N+E  GEARM
Sbjct: 241 AGVLGSLKKSWRKVSVINIVVVIILVIFYVIACAAYQNVKRMYNDEPVGEARM 275

[Close]

BLAST of Lsi10G012990 vs. ExPASy Swiss-Prot
Match: Q8S8Q6 (Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 6.1e-70
Identity = 136/283 (48.06%), Postives = 183/283 (64.66%), Query Frame = 0


Query: 2   RTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAGF 61
           R SN+L+G+LNFL F+LSIPILAGGIWLS K  STEC RFL  P+I +GV +MVV++AG 
Sbjct: 3   RCSNNLVGILNFLVFLLSIPILAGGIWLSQK-GSTECERFLDKPVIALGVFLMVVAIAGL 62

Query: 62  AGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGQTVPSRAYLDYYLQDYSGW 121
            G+C R T+L+W+YLFVMF +I+ +    VFA+ VT+KG+G+ +  + Y +Y L DYS W
Sbjct: 63  IGSCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTW 122

Query: 122 LKDRVAEESYWGKISSCIRDSKVCKKMGRIVGGVPETSEMFNLRKLSPIEIDIRRFPLSS 181
           L+ RV     W KI SC+ +SKVC K+      VP  S  F    L+ ++          
Sbjct: 123 LQKRVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNS--FYKEHLTALQ---------- 182

Query: 182 VIAVSAGFSGCCKPPTDCGFVYQNETVWTGVEGMVLVNPDCTKWNNDQAELCYDCNSCKA 241
                   SGCCKP  +CGF Y N T WT        NPDC  W+N + +LC+DC SCKA
Sbjct: 183 --------SGCCKPSDECGFEYVNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKA 242

Query: 242 GVLASLKRSWRKVSIINIVVLIILVIAYVIGIAAFRNNRRIDN 285
           G+L ++K +W+KV+I+NIV L+ L+I Y +G  AFRNN+R D+
Sbjct: 243 GLLDNVKSAWKKVAIVNIVFLVFLIIVYSVGCCAFRNNKRDDS 264

[Close]

BLAST of Lsi10G012990 vs. ExPASy Swiss-Prot
Match: Q9SUD4 (Tetraspanin-7 OS=Arabidopsis thaliana OX=3702 GN=TET7 PE=2 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 6.5e-64
Identity = 127/281 (45.20%), Postives = 176/281 (62.63%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           ++ SN+L+G+LNF TF+LSIPIL+ GIWL   A +TEC RFL  P++++G+ +M VS+AG
Sbjct: 2   VQCSNNLLGILNFFTFLLSIPILSAGIWLGKNA-ATECERFLDKPMVVLGIFLMFVSIAG 61

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGQTVPSRAYLDYYLQDYSG 120
             GAC R + L+WLYLF MF +I+    F +FA+AVT++G+G+ +  R Y +Y++ DYS 
Sbjct: 62  LVGACCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSN 121

Query: 121 WLKDRVAEESYWGKISSCIRDSKVCKKMGRIVGGVPETSEMFNLRKLSPIEIDIRRFPLS 180
           WL+ RV     W +I SC+  S VC                +  R  S   I++  F  S
Sbjct: 122 WLQKRVNNAKNWERIRSCLMYSDVC--------------STYRTRYAS---INVEDFYKS 181

Query: 181 SVIAVSAGFSGCCKPPTDCGFVYQNETVWTGVEGMVLVNPDCTKWNNDQAELCYDCNSCK 240
           ++ A+    SGCCKP  DC F Y N T WT   G    N DC  W+N    LCYDC +CK
Sbjct: 182 NLNALQ---SGCCKPSNDCNFTYVNPTTWTKTPG-PYKNEDCNVWDNKPGTLCYDCEACK 241

Query: 241 AGVLASLKRSWRKVSIINIVVLIILVIAYVIGIAAFRNNRR 282
           AG+L ++K SW+KV+ +NIV LI L+I Y +G  AFRNNR+
Sbjct: 242 AGLLDNIKNSWKKVAKVNIVFLIFLIIVYSVGCCAFRNNRK 260

[Close]

BLAST of Lsi10G012990 vs. ExPASy Swiss-Prot
Match: Q9M0B7 (Tetraspanin-9 OS=Arabidopsis thaliana OX=3702 GN=TET9 PE=2 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 8.5e-64
Identity = 122/280 (43.57%), Postives = 176/280 (62.86%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           +R SN L+G+LNF  F+LS+PIL+ GIWLS KA +T+C RFL  P+I +GV +M++++AG
Sbjct: 2   VRFSNSLVGILNFFVFLLSVPILSTGIWLSLKA-TTQCERFLDKPMIALGVFLMIIAIAG 61

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGQTVPSRAYLDYYLQDYSG 120
             G+C R T+L+W YLFVMFF+I+ ++ F +FA+ VT KGSG+T+  +AY +Y L+ YS 
Sbjct: 62  VVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSD 121

Query: 121 WLKDRVAEESYWGKISSCIRDSKVCKKMGRIVGGVPETSEMFNLRKLSPIEIDIRRFPLS 180
           WL+ RV    +W  I SC+ +SK C  +  +      T   F    L+  E         
Sbjct: 122 WLQRRVNNAKHWNSIRSCLYESKFCYNLELVTAN--HTVSDFYKEDLTAFE--------- 181

Query: 181 SVIAVSAGFSGCCKPPTDCGFVYQNETVWTGVEGMVLVNPDCTKWNNDQAELCYDCNSCK 240
                    SGCCKP  DC F Y   T W    G    N DC  W+N++ +LCY+C +CK
Sbjct: 182 ---------SGCCKPSNDCDFTYITSTTWNKTSG-THKNSDCQLWDNEKHKLCYNCKACK 241

Query: 241 AGVLASLKRSWRKVSIINIVVLIILVIAYVIGIAAFRNNR 281
           AG L +LK +W++V+I+NI+ L++LV+ Y +G  AFRNN+
Sbjct: 242 AGFLDNLKAAWKRVAIVNIIFLVLLVVVYAMGCCAFRNNK 259

[Close]

BLAST of Lsi10G012990 vs. ExPASy TrEMBL
Match: A0A6J1L7J6 (tetraspanin-3-like OS=Cucurbita maxima OX=3661 GN=LOC111499906 PE=3 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 1.6e-150
Identity = 272/303 (89.77%), Postives = 279/303 (92.08%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MRTSNHLIGLLNFLTFVLSIPILAGGIWLS++ANSTECLRFLQWPLIIIGVAIMVVSLAG
Sbjct: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGQTVPSRAYLDYYLQDYSG 120
           FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSG+TVPSRAYLDYYLQDYSG
Sbjct: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSKVCKKMGRIVGGVPETSEMFNLRKLSPIEIDIRRFPLS 180
           WLKDRVAEESYWGKISSCIRDS+VC+KMGR VGGVPET EMFNLRKLSPIE         
Sbjct: 121 WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIE--------- 180

Query: 181 SVIAVSAGFSGCCKPPTDCGFVYQNETVWTGVEGMVLVNPDCTKWNNDQAELCYDCNSCK 240
                    SGCCKPPTDCGFVYQNETVWTG EGMVLVNPDCTKWN+DQ  LCYDCNSCK
Sbjct: 181 ---------SGCCKPPTDCGFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCK 240

Query: 241 AGVLASLKRSWRKVSIINIVVLIILVIAYVIGIAAFRNNRRIDNEEASGEARMEKARPSW 300
           AGVLASLKRSWRKVS+INIVVLIILVIAYVIGIAAFRNNRRIDNEE SGEARMEKARPSW
Sbjct: 241 AGVLASLKRSWRKVSVINIVVLIILVIAYVIGIAAFRNNRRIDNEEPSGEARMEKARPSW 285

Query: 301 IHS 304
           IHS
Sbjct: 301 IHS 285

[Close]

BLAST of Lsi10G012990 vs. ExPASy TrEMBL
Match: A0A6J1G8M6 (tetraspanin-3-like OS=Cucurbita moschata OX=3662 GN=LOC111451750 PE=3 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 3.6e-150
Identity = 271/303 (89.44%), Postives = 279/303 (92.08%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MRTSNHLIGLLNFLTFVLSIPILAGGIWLS++ANSTECLRFLQWPLIIIGVAIMVVSLAG
Sbjct: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGQTVPSRAYLDYYLQDYSG 120
           FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSG+TVPSRAYLDYYLQDYSG
Sbjct: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSKVCKKMGRIVGGVPETSEMFNLRKLSPIEIDIRRFPLS 180
           WLKDRVAEESYWGKISSCIRDS+VC+KMGR VGGVPET EMFNLRKLSPIE         
Sbjct: 121 WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETIEMFNLRKLSPIE--------- 180

Query: 181 SVIAVSAGFSGCCKPPTDCGFVYQNETVWTGVEGMVLVNPDCTKWNNDQAELCYDCNSCK 240
                    SGCCKPPTDCGFVYQNETVWTG EGMVLVNPDCTKWN+DQ  LCYDCNSCK
Sbjct: 181 ---------SGCCKPPTDCGFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCK 240

Query: 241 AGVLASLKRSWRKVSIINIVVLIILVIAYVIGIAAFRNNRRIDNEEASGEARMEKARPSW 300
           AGVLAS+KRSWRKVS+INIVVLIILVIAYVIGIAAFRNNRRIDNEE SGEARMEKARPSW
Sbjct: 241 AGVLASVKRSWRKVSVINIVVLIILVIAYVIGIAAFRNNRRIDNEEPSGEARMEKARPSW 285

Query: 301 IHS 304
           IHS
Sbjct: 301 IHS 285

[Close]

BLAST of Lsi10G012990 vs. ExPASy TrEMBL
Match: A0A0A0KHN9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G290280 PE=3 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 5.2e-149
Identity = 270/303 (89.11%), Postives = 278/303 (91.75%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG
Sbjct: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGQTVPSRAYLDYYLQDYSG 120
           FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSG+TVPSR YLDYYLQDYSG
Sbjct: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRVYLDYYLQDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSKVCKKMGRIVGGVPETSEMFNLRKLSPIEIDIRRFPLS 180
           WLKDRVAEESYW KISSC+RDSKVCKKMGRIVGGVPE+ EMFNLRKLSPIE         
Sbjct: 121 WLKDRVAEESYWEKISSCVRDSKVCKKMGRIVGGVPESVEMFNLRKLSPIE--------- 180

Query: 181 SVIAVSAGFSGCCKPPTDCGFVYQNETVWTGVEGMVLVNPDCTKWNNDQAELCYDCNSCK 240
                    SGCCKPP+DCGF YQNETVWTGVEGMVL N DCT WNNDQ+ELCY+C+SCK
Sbjct: 181 ---------SGCCKPPSDCGFSYQNETVWTGVEGMVLFNSDCTNWNNDQSELCYNCDSCK 240

Query: 241 AGVLASLKRSWRKVSIINIVVLIILVIAYVIGIAAFRNNRRIDNEEASGEARMEKARPSW 300
           AGVLASLKRSWRKVS+INIVVLIILVIAYVIGIAAFRNNRRIDNEEASGEARMEKARPSW
Sbjct: 241 AGVLASLKRSWRKVSVINIVVLIILVIAYVIGIAAFRNNRRIDNEEASGEARMEKARPSW 285

Query: 301 IHS 304
           IHS
Sbjct: 301 IHS 285

[Close]

BLAST of Lsi10G012990 vs. ExPASy TrEMBL
Match: A0A5D3CRB9 (Tetraspanin-3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00610 PE=3 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.2e-147
Identity = 268/305 (87.87%), Postives = 279/305 (91.48%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG
Sbjct: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGQTVPSRAYLDYYLQDYSG 120
           FAGACYRNTFLMWLYLFVMFF+IVALIVF+VFAYAVTDKGSG+TVPSR YLDYYLQDYSG
Sbjct: 61  FAGACYRNTFLMWLYLFVMFFIIVALIVFVVFAYAVTDKGSGRTVPSRVYLDYYLQDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSKVCKKMGRIVGGVPETSEMFNLRKLSPIEIDIRRFPLS 180
           WLKDRVAEESYW KISSCIRDSKVCKKMGRIVGGVPE+ EMF+LRKLSPIE         
Sbjct: 121 WLKDRVAEESYWEKISSCIRDSKVCKKMGRIVGGVPESVEMFSLRKLSPIE--------- 180

Query: 181 SVIAVSAGFSGCCKPPTDCGFVYQNETVWTGVE--GMVLVNPDCTKWNNDQAELCYDCNS 240
                    SGCCKPP+DCGF YQNETVWTGVE  GMVLVN DCT WNNDQ+ELCY+C+S
Sbjct: 181 ---------SGCCKPPSDCGFAYQNETVWTGVEGTGMVLVNSDCTNWNNDQSELCYNCDS 240

Query: 241 CKAGVLASLKRSWRKVSIINIVVLIILVIAYVIGIAAFRNNRRIDNEEASGEARMEKARP 300
           CKAGVLASLKRSWRKVS+INIVVLIILVIAYVIG+AAFRNNRRIDNEEASGEARMEKARP
Sbjct: 241 CKAGVLASLKRSWRKVSVINIVVLIILVIAYVIGLAAFRNNRRIDNEEASGEARMEKARP 287

Query: 301 SWIHS 304
           SWIHS
Sbjct: 301 SWIHS 287

[Close]

BLAST of Lsi10G012990 vs. ExPASy TrEMBL
Match: A0A1S3CKC7 (tetraspanin-3 OS=Cucumis melo OX=3656 GN=LOC103501918 PE=3 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.2e-147
Identity = 268/305 (87.87%), Postives = 279/305 (91.48%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG
Sbjct: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGQTVPSRAYLDYYLQDYSG 120
           FAGACYRNTFLMWLYLFVMFF+IVALIVF+VFAYAVTDKGSG+TVPSR YLDYYLQDYSG
Sbjct: 61  FAGACYRNTFLMWLYLFVMFFIIVALIVFVVFAYAVTDKGSGRTVPSRVYLDYYLQDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSKVCKKMGRIVGGVPETSEMFNLRKLSPIEIDIRRFPLS 180
           WLKDRVAEESYW KISSCIRDSKVCKKMGRIVGGVPE+ EMF+LRKLSPIE         
Sbjct: 121 WLKDRVAEESYWEKISSCIRDSKVCKKMGRIVGGVPESVEMFSLRKLSPIE--------- 180

Query: 181 SVIAVSAGFSGCCKPPTDCGFVYQNETVWTGVE--GMVLVNPDCTKWNNDQAELCYDCNS 240
                    SGCCKPP+DCGF YQNETVWTGVE  GMVLVN DCT WNNDQ+ELCY+C+S
Sbjct: 181 ---------SGCCKPPSDCGFAYQNETVWTGVEGTGMVLVNSDCTNWNNDQSELCYNCDS 240

Query: 241 CKAGVLASLKRSWRKVSIINIVVLIILVIAYVIGIAAFRNNRRIDNEEASGEARMEKARP 300
           CKAGVLASLKRSWRKVS+INIVVLIILVIAYVIG+AAFRNNRRIDNEEASGEARMEKARP
Sbjct: 241 CKAGVLASLKRSWRKVSVINIVVLIILVIAYVIGLAAFRNNRRIDNEEASGEARMEKARP 287

Query: 301 SWIHS 304
           SWIHS
Sbjct: 301 SWIHS 287

[Close]

BLAST of Lsi10G012990 vs. NCBI nr
Match: XP_038902578.1 (tetraspanin-3-like [Benincasa hispida])

HSP 1 Score: 543.5 bits (1399), Expect = 1.2e-150
Identity = 272/303 (89.77%), Postives = 282/303 (93.07%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG
Sbjct: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGQTVPSRAYLDYYLQDYSG 120
           FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSG+TVPSRAYLDYYLQDYSG
Sbjct: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSKVCKKMGRIVGGVPETSEMFNLRKLSPIEIDIRRFPLS 180
           WLKDRVAEESYWGKISSCIRDSKVCKKMGR VGGVPE+ EMF+LRKLSPIE         
Sbjct: 121 WLKDRVAEESYWGKISSCIRDSKVCKKMGRTVGGVPESVEMFSLRKLSPIE--------- 180

Query: 181 SVIAVSAGFSGCCKPPTDCGFVYQNETVWTGVEGMVLVNPDCTKWNNDQAELCYDCNSCK 240
                    SGCCKPPTDCGFVYQNET+WTGV+GM+ +NPDCTKWNNDQAELCY+C+SCK
Sbjct: 181 ---------SGCCKPPTDCGFVYQNETLWTGVDGMMPINPDCTKWNNDQAELCYNCDSCK 240

Query: 241 AGVLASLKRSWRKVSIINIVVLIILVIAYVIGIAAFRNNRRIDNEEASGEARMEKARPSW 300
           AGVLASLKRSWRKVS+INIVVLIILVIAYVIGIAAFRNNRRIDNEEASGEARMEKARPSW
Sbjct: 241 AGVLASLKRSWRKVSVINIVVLIILVIAYVIGIAAFRNNRRIDNEEASGEARMEKARPSW 285

Query: 301 IHS 304
           IHS
Sbjct: 301 IHS 285

[Close]

BLAST of Lsi10G012990 vs. NCBI nr
Match: XP_023007398.1 (tetraspanin-3-like [Cucurbita maxima])

HSP 1 Score: 542.0 bits (1395), Expect = 3.4e-150
Identity = 272/303 (89.77%), Postives = 279/303 (92.08%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MRTSNHLIGLLNFLTFVLSIPILAGGIWLS++ANSTECLRFLQWPLIIIGVAIMVVSLAG
Sbjct: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGQTVPSRAYLDYYLQDYSG 120
           FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSG+TVPSRAYLDYYLQDYSG
Sbjct: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSKVCKKMGRIVGGVPETSEMFNLRKLSPIEIDIRRFPLS 180
           WLKDRVAEESYWGKISSCIRDS+VC+KMGR VGGVPET EMFNLRKLSPIE         
Sbjct: 121 WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIE--------- 180

Query: 181 SVIAVSAGFSGCCKPPTDCGFVYQNETVWTGVEGMVLVNPDCTKWNNDQAELCYDCNSCK 240
                    SGCCKPPTDCGFVYQNETVWTG EGMVLVNPDCTKWN+DQ  LCYDCNSCK
Sbjct: 181 ---------SGCCKPPTDCGFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCK 240

Query: 241 AGVLASLKRSWRKVSIINIVVLIILVIAYVIGIAAFRNNRRIDNEEASGEARMEKARPSW 300
           AGVLASLKRSWRKVS+INIVVLIILVIAYVIGIAAFRNNRRIDNEE SGEARMEKARPSW
Sbjct: 241 AGVLASLKRSWRKVSVINIVVLIILVIAYVIGIAAFRNNRRIDNEEPSGEARMEKARPSW 285

Query: 301 IHS 304
           IHS
Sbjct: 301 IHS 285

[Close]

BLAST of Lsi10G012990 vs. NCBI nr
Match: XP_022948055.1 (tetraspanin-3-like [Cucurbita moschata])

HSP 1 Score: 540.8 bits (1392), Expect = 7.5e-150
Identity = 271/303 (89.44%), Postives = 279/303 (92.08%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MRTSNHLIGLLNFLTFVLSIPILAGGIWLS++ANSTECLRFLQWPLIIIGVAIMVVSLAG
Sbjct: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGQTVPSRAYLDYYLQDYSG 120
           FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSG+TVPSRAYLDYYLQDYSG
Sbjct: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSKVCKKMGRIVGGVPETSEMFNLRKLSPIEIDIRRFPLS 180
           WLKDRVAEESYWGKISSCIRDS+VC+KMGR VGGVPET EMFNLRKLSPIE         
Sbjct: 121 WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETIEMFNLRKLSPIE--------- 180

Query: 181 SVIAVSAGFSGCCKPPTDCGFVYQNETVWTGVEGMVLVNPDCTKWNNDQAELCYDCNSCK 240
                    SGCCKPPTDCGFVYQNETVWTG EGMVLVNPDCTKWN+DQ  LCYDCNSCK
Sbjct: 181 ---------SGCCKPPTDCGFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCK 240

Query: 241 AGVLASLKRSWRKVSIINIVVLIILVIAYVIGIAAFRNNRRIDNEEASGEARMEKARPSW 300
           AGVLAS+KRSWRKVS+INIVVLIILVIAYVIGIAAFRNNRRIDNEE SGEARMEKARPSW
Sbjct: 241 AGVLASVKRSWRKVSVINIVVLIILVIAYVIGIAAFRNNRRIDNEEPSGEARMEKARPSW 285

Query: 301 IHS 304
           IHS
Sbjct: 301 IHS 285

[Close]

BLAST of Lsi10G012990 vs. NCBI nr
Match: KAG6605519.1 (Tetraspanin-3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035457.1 Tetraspanin-3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 540.8 bits (1392), Expect = 7.5e-150
Identity = 271/303 (89.44%), Postives = 279/303 (92.08%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MRTSNHLIGLLNFLTFVLSIPILAGGIWLS++ANSTECLRFLQWPLIIIGVAIMVVSLAG
Sbjct: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGQTVPSRAYLDYYLQDYSG 120
           FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSG+TVPSRAYLDYYLQDYSG
Sbjct: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSKVCKKMGRIVGGVPETSEMFNLRKLSPIEIDIRRFPLS 180
           WLKDRVAEESYWGKISSCIRDS+VC+KMGR VGGVPET EMFNLRKLSPIE         
Sbjct: 121 WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIE--------- 180

Query: 181 SVIAVSAGFSGCCKPPTDCGFVYQNETVWTGVEGMVLVNPDCTKWNNDQAELCYDCNSCK 240
                    SGCCKPPTDCGFVYQNETVWTG EGMVLVNPDCTKWN+DQ  LCYDCNSCK
Sbjct: 181 ---------SGCCKPPTDCGFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCK 240

Query: 241 AGVLASLKRSWRKVSIINIVVLIILVIAYVIGIAAFRNNRRIDNEEASGEARMEKARPSW 300
           AGVLAS+KRSWRKVS+INIVVLIILVIAYVIGIAAFRNNRRIDNEE SGEARMEKARPSW
Sbjct: 241 AGVLASVKRSWRKVSVINIVVLIILVIAYVIGIAAFRNNRRIDNEEPSGEARMEKARPSW 285

Query: 301 IHS 304
           IHS
Sbjct: 301 IHS 285

[Close]

BLAST of Lsi10G012990 vs. NCBI nr
Match: XP_023532275.1 (tetraspanin-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 538.1 bits (1385), Expect = 4.9e-149
Identity = 270/303 (89.11%), Postives = 278/303 (91.75%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MRTSNHLIGLLNFLTFVLSIPILAGGIWLS++ANSTECLRFLQWPLIIIGVAIMVVSLAG
Sbjct: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGQTVPSRAYLDYYLQDYSG 120
           FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSG+TVPSRAYLDYYLQDYSG
Sbjct: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSKVCKKMGRIVGGVPETSEMFNLRKLSPIEIDIRRFPLS 180
           WLKDRVAEESYWGKISSCIRDS+VC+KMGR VGGVPET EMFNLRKLSPIE         
Sbjct: 121 WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIE--------- 180

Query: 181 SVIAVSAGFSGCCKPPTDCGFVYQNETVWTGVEGMVLVNPDCTKWNNDQAELCYDCNSCK 240
                    SGCCKPPTDC FVYQNETVWTG EGMVLVNPDCTKWN+DQ  LCYDCNSCK
Sbjct: 181 ---------SGCCKPPTDCDFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCK 240

Query: 241 AGVLASLKRSWRKVSIINIVVLIILVIAYVIGIAAFRNNRRIDNEEASGEARMEKARPSW 300
           AGVLAS+KRSWRKVS+INIVVLIILVIAYVIGIAAFRNNRRIDNEE SGEARMEKARPSW
Sbjct: 241 AGVLASVKRSWRKVSVINIVVLIILVIAYVIGIAAFRNNRRIDNEEPSGEARMEKARPSW 285

Query: 301 IHS 304
           IHS
Sbjct: 301 IHS 285

[Close]

BLAST of Lsi10G012990 vs. TAIR 10
Match: AT3G45600.1 (tetraspanin3 )

HSP 1 Score: 430.6 bits (1106), Expect = 1.0e-120
Identity = 212/302 (70.20%), Postives = 245/302 (81.13%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MRTSNHLIGL+NFLTF+LSIPIL GGIWLSS+ANST+CLRFLQWPLI+IG++IMVVSLAG
Sbjct: 1   MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGQTVPSRAYLDYYLQDYSG 120
           FAGACYRN FLMWLYL VM  +I ALI FI+FAYAVTDKGSG+TV +R YLDYYL+DYSG
Sbjct: 61  FAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSKVCKKMGRIVGGVPETSEMFNLRKLSPIEIDIRRFPLS 180
           WLKDRV+++SYWGKISSC+RDS  C+K+GR   GVPET++MF LR+LSP+E         
Sbjct: 121 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVE--------- 180

Query: 181 SVIAVSAGFSGCCKPPTDCGFVYQNETVWTGVEGMVLVNPDCTKWNNDQAELCYDCNSCK 240
                    SGCCKPPTDCGF Y NET W    GM+  N DC  W+NDQ+ LCY C+SCK
Sbjct: 181 ---------SGCCKPPTDCGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCK 240

Query: 241 AGVLASLKRSWRKVSIINIVVLIILVIAYVIGIAAFRNNRRIDNEEASGEARMEKARPSW 300
           AGVL SLK+SWRKVS+INIVVLIILVI YVI  AA+RN +RIDN+E +GEARM K+ PS 
Sbjct: 241 AGVLGSLKKSWRKVSVINIVVLIILVIFYVIAYAAYRNVKRIDNDEPAGEARMTKSHPSH 284

Query: 301 IH 303
            H
Sbjct: 301 FH 284

[Close]

BLAST of Lsi10G012990 vs. TAIR 10
Match: AT5G60220.1 (tetraspanin4 )

HSP 1 Score: 394.8 bits (1013), Expect = 6.2e-110
Identity = 196/293 (66.89%), Postives = 226/293 (77.13%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MR+ ++LIGL+NF TF+LSIPIL GGIWLSS+ANST+CLRFLQWPLIIIG++IMV+SLAG
Sbjct: 1   MRSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGQTVPSRAYLDYYLQDYSG 120
            AGACY+N FLMWLYLF MFFVI ALI F +FAY VTDKGSG+ V +R YLDYYL DYSG
Sbjct: 61  IAGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSKVCKKMGRIVGGVPETSEMFNLRKLSPIEIDIRRFPLS 180
           WLKDRV +  YW  I SC+RDS VCKK+GR + GVPET+ MF  R LSP+E         
Sbjct: 121 WLKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVE--------- 180

Query: 181 SVIAVSAGFSGCCKPPTDCGFVYQNETVWTGVEGMVLVNPDCTKWNNDQAELCYDCNSCK 240
                    SGCCKPPTDCG+ Y NETVW     MV  NPDC  WNNDQ  LCY C+SCK
Sbjct: 181 ---------SGCCKPPTDCGYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCK 240

Query: 241 AGVLASLKRSWRKVSIINIVVLIILVIAYVIGIAAFRNNRRIDNEEASGEARM 294
           AGVL SLK+SWRKVS+INIVV+IILVI YVI  AA++N +R+ N+E  GEARM
Sbjct: 241 AGVLGSLKKSWRKVSVINIVVVIILVIFYVIACAAYQNVKRMYNDEPVGEARM 275

[Close]

BLAST of Lsi10G012990 vs. TAIR 10
Match: AT2G23810.1 (tetraspanin8 )

HSP 1 Score: 265.8 bits (678), Expect = 4.3e-71
Identity = 136/283 (48.06%), Postives = 183/283 (64.66%), Query Frame = 0


Query: 2   RTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAGF 61
           R SN+L+G+LNFL F+LSIPILAGGIWLS K  STEC RFL  P+I +GV +MVV++AG 
Sbjct: 3   RCSNNLVGILNFLVFLLSIPILAGGIWLSQK-GSTECERFLDKPVIALGVFLMVVAIAGL 62

Query: 62  AGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGQTVPSRAYLDYYLQDYSGW 121
            G+C R T+L+W+YLFVMF +I+ +    VFA+ VT+KG+G+ +  + Y +Y L DYS W
Sbjct: 63  IGSCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTW 122

Query: 122 LKDRVAEESYWGKISSCIRDSKVCKKMGRIVGGVPETSEMFNLRKLSPIEIDIRRFPLSS 181
           L+ RV     W KI SC+ +SKVC K+      VP  S  F    L+ ++          
Sbjct: 123 LQKRVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNS--FYKEHLTALQ---------- 182

Query: 182 VIAVSAGFSGCCKPPTDCGFVYQNETVWTGVEGMVLVNPDCTKWNNDQAELCYDCNSCKA 241
                   SGCCKP  +CGF Y N T WT        NPDC  W+N + +LC+DC SCKA
Sbjct: 183 --------SGCCKPSDECGFEYVNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKA 242

Query: 242 GVLASLKRSWRKVSIINIVVLIILVIAYVIGIAAFRNNRRIDN 285
           G+L ++K +W+KV+I+NIV L+ L+I Y +G  AFRNN+R D+
Sbjct: 243 GLLDNVKSAWKKVAIVNIVFLVFLIIVYSVGCCAFRNNKRDDS 264

[Close]

BLAST of Lsi10G012990 vs. TAIR 10
Match: AT4G28050.1 (tetraspanin7 )

HSP 1 Score: 245.7 bits (626), Expect = 4.6e-65
Identity = 127/281 (45.20%), Postives = 176/281 (62.63%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           ++ SN+L+G+LNF TF+LSIPIL+ GIWL   A +TEC RFL  P++++G+ +M VS+AG
Sbjct: 2   VQCSNNLLGILNFFTFLLSIPILSAGIWLGKNA-ATECERFLDKPMVVLGIFLMFVSIAG 61

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGQTVPSRAYLDYYLQDYSG 120
             GAC R + L+WLYLF MF +I+    F +FA+AVT++G+G+ +  R Y +Y++ DYS 
Sbjct: 62  LVGACCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSN 121

Query: 121 WLKDRVAEESYWGKISSCIRDSKVCKKMGRIVGGVPETSEMFNLRKLSPIEIDIRRFPLS 180
           WL+ RV     W +I SC+  S VC                +  R  S   I++  F  S
Sbjct: 122 WLQKRVNNAKNWERIRSCLMYSDVC--------------STYRTRYAS---INVEDFYKS 181

Query: 181 SVIAVSAGFSGCCKPPTDCGFVYQNETVWTGVEGMVLVNPDCTKWNNDQAELCYDCNSCK 240
           ++ A+    SGCCKP  DC F Y N T WT   G    N DC  W+N    LCYDC +CK
Sbjct: 182 NLNALQ---SGCCKPSNDCNFTYVNPTTWTKTPG-PYKNEDCNVWDNKPGTLCYDCEACK 241

Query: 241 AGVLASLKRSWRKVSIINIVVLIILVIAYVIGIAAFRNNRR 282
           AG+L ++K SW+KV+ +NIV LI L+I Y +G  AFRNNR+
Sbjct: 242 AGLLDNIKNSWKKVAKVNIVFLIFLIIVYSVGCCAFRNNRK 260

[Close]

BLAST of Lsi10G012990 vs. TAIR 10
Match: AT4G30430.1 (tetraspanin9 )

HSP 1 Score: 245.4 bits (625), Expect = 6.1e-65
Identity = 122/280 (43.57%), Postives = 176/280 (62.86%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           +R SN L+G+LNF  F+LS+PIL+ GIWLS KA +T+C RFL  P+I +GV +M++++AG
Sbjct: 2   VRFSNSLVGILNFFVFLLSVPILSTGIWLSLKA-TTQCERFLDKPMIALGVFLMIIAIAG 61

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGQTVPSRAYLDYYLQDYSG 120
             G+C R T+L+W YLFVMFF+I+ ++ F +FA+ VT KGSG+T+  +AY +Y L+ YS 
Sbjct: 62  VVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSD 121

Query: 121 WLKDRVAEESYWGKISSCIRDSKVCKKMGRIVGGVPETSEMFNLRKLSPIEIDIRRFPLS 180
           WL+ RV    +W  I SC+ +SK C  +  +      T   F    L+  E         
Sbjct: 122 WLQRRVNNAKHWNSIRSCLYESKFCYNLELVTAN--HTVSDFYKEDLTAFE--------- 181

Query: 181 SVIAVSAGFSGCCKPPTDCGFVYQNETVWTGVEGMVLVNPDCTKWNNDQAELCYDCNSCK 240
                    SGCCKP  DC F Y   T W    G    N DC  W+N++ +LCY+C +CK
Sbjct: 182 ---------SGCCKPSNDCDFTYITSTTWNKTSG-THKNSDCQLWDNEKHKLCYNCKACK 241

Query: 241 AGVLASLKRSWRKVSIINIVVLIILVIAYVIGIAAFRNNR 281
           AG L +LK +W++V+I+NI+ L++LV+ Y +G  AFRNN+
Sbjct: 242 AGFLDNLKAAWKRVAIVNIIFLVLLVVVYAMGCCAFRNNK 259

The following BLAST results are available for this feature:

BLAST of Lsi10G012990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1E7	1.4e-119	70.20	Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1	[more]
Q9LSS4	8.7e-109	66.89	Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1	[more]
Q8S8Q6	6.1e-70	48.06	Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1	[more]
Q9SUD4	6.5e-64	45.20	Tetraspanin-7 OS=Arabidopsis thaliana OX=3702 GN=TET7 PE=2 SV=1	[more]
Q9M0B7	8.5e-64	43.57	Tetraspanin-9 OS=Arabidopsis thaliana OX=3702 GN=TET9 PE=2 SV=1	[more]

BLAST of Lsi10G012990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L7J6	1.6e-150	89.77	tetraspanin-3-like OS=Cucurbita maxima OX=3661 GN=LOC111499906 PE=3 SV=1	[more]
A0A6J1G8M6	3.6e-150	89.44	tetraspanin-3-like OS=Cucurbita moschata OX=3662 GN=LOC111451750 PE=3 SV=1	[more]
A0A0A0KHN9	5.2e-149	89.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G290280 PE=3 SV=1	[more]
A0A5D3CRB9	2.2e-147	87.87	Tetraspanin-3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00610 P...	[more]
A0A1S3CKC7	2.2e-147	87.87	tetraspanin-3 OS=Cucumis melo OX=3656 GN=LOC103501918 PE=3 SV=1	[more]

BLAST of Lsi10G012990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902578.1	1.2e-150	89.77	tetraspanin-3-like [Benincasa hispida]	[more]
XP_023007398.1	3.4e-150	89.77	tetraspanin-3-like [Cucurbita maxima]	[more]
XP_022948055.1	7.5e-150	89.44	tetraspanin-3-like [Cucurbita moschata]	[more]
KAG6605519.1	7.5e-150	89.44	Tetraspanin-3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035457.1 Tet...	[more]
XP_023532275.1	4.9e-149	89.11	tetraspanin-3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi10G012990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G45600.1	1.0e-120	70.20	tetraspanin3	[more]
AT5G60220.1	6.2e-110	66.89	tetraspanin4	[more]
AT2G23810.1	4.3e-71	48.06	tetraspanin8	[more]
AT4G28050.1	4.6e-65	45.20	tetraspanin7	[more]
AT4G30430.1	6.1e-65	43.57	tetraspanin9	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00259	TMFOUR	coord: 39..65 score: 28.37 coord: 6..29 score: 27.84 coord: 66..94 score: 13.72
None	No IPR available	PANTHER	PTHR32191:SF52	TETRASPANIN-4	coord: 1..298
IPR018499	Tetraspanin/Peripherin	PFAM	PF00335	Tetraspanin	coord: 6..270 e-value: 4.5E-31 score: 108.3
IPR044991	Tetraspani, plant	PANTHER	PTHR32191	TETRASPANIN-8-RELATED	coord: 1..298

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G012990.1	Lsi10G012990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma