Lsi10G010560 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G010560
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	EH domain-binding protein 1-like protein 1
Location	chr10: 14791558 .. 14795490 (-)
RNA-Seq Expression	Lsi10G010560
Synteny	Lsi10G010560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGTGGTGAAGATTTCAATGGAGGTGGAGGGGACTTGTAGTAGTAAGGAGGTGGTGGTGATGGAGACGGGGGTGGAGGTGACTTATAATAATAAGGTGGAGGAGGTGATGGAGATGGTGGAGGTGGAGATTTGTAAATATATGGAGGAGGTGGCGATGGAGATGGTGGAGGTGGTGATTTATAGGTATAAGGAGGGGGAGGAGACGGTGATGGAGGTGGTGGTGATTTATAGATATACGGGGGTGGTGGAGAAGGGGACGGTGGAGGAGGTGATTTGTAAACATAGGGAGGTGGTGGTGATGGAGACGGCGGTGGGGGAGACTTATAGACATAGGGAGGTGGTGGTGATGGAGATGGTGGTGGAGGAGATTTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGTGGTGGAGATTTATAGATATAAGGAGGTGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGAGGTGATTTATAGACATAAGGAGGTGGTGGTGACGGAGATGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGAGATGGAGATGGTGGTGGAGGAGACTTATAGACATAAGGAGGGGGTGGTGATGGAGAAGGTGGAGGAGGAGATGTGTAGACATATGGAGGTGGTGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGTGGAGGAGACTTGTAAATGTAGGGAGGTGGTGGTGGGGAATTGTAGATGTAAGGAGGCGGTGGTGGCGATTTGTAGACATAAGGAGGTGGGGGTGGAGATTTATAAATATAAGGAGATGGTGGTGGTGGAGACTTGTAAACATATGATGGCGGTGGAGACTTGTGGTGCTTATATTTTGGTACTGGTGGTGGCTTGTGGTGCTTATACTTTGGCAGTGGTGGTGGCTTGTGGTGGCGGTGATATTTTAGCGGCGGCGGAGGTGTGTGGTGATGATACTTCGGTAGAAAATCTTTGTGATGTTGATGCTTTGGTAAATCATCACCGAGTTCCGGCTTTTTGA

mRNA sequence

ATGGGGGTGGTGAAGATTTCAATGGAGGTGGAGGGGACTTGTAGTAGTAAGGAGGTGGTGGTGATGGAGACGGGGGTGGAGGTGACTTATAATAATAAGGTGGAGGAGGTGATGGAGATGGTGGAGGTGGAGATTTGTAAATATATGGAGGAGGTGGCGATGGAGATGGTGGAGGTGGTGATTTATAGGTATAAGGAGGGGGAGGAGACGGTGATGGAGGTGGTGGTGATTTATAGATATACGGGGGTGGTGGAGAAGGGGACGGTGGAGGAGGTGATTTGTAAACATAGGGAGGTGGTGGTGATGGAGACGGCGGTGGGGGAGACTTATAGACATAGGGAGGTGGTGGTGATGGAGATGGTGGTGGAGGAGATTTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGTGGTGGAGATTTATAGATATAAGGAGGTGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGAGGTGATTTATAGACATAAGGAGGTGGTGGTGACGGAGATGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGAGATGGAGATGGTGGTGGAGGAGACTTATAGACATAAGGAGGGGGTGGTGATGGAGAAGGTGGAGGAGGAGATGTGTAGACATATGGAGGTGGTGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGTGGAGGAGACTTGTAAATGTAGGGAGGTGGTGGTGGGGAATTGTAGATGTAAGGAGGCGGTGGTGGCGATTTGTAGACATAAGGAGGTGGGGGTGGAGATTTATAAATATAAGGAGATGGTGGTGGTGGAGACTTGTAAACATATGATGGCGGTGGAGACTTGTGGTGCTTATATTTTGGTACTGGTGGTGGCTTGTGGTGCTTATACTTTGGCAGTGGTGGTGGCTTGTGGTGGCGGTGATATTTTAGCGGCGGCGGAGGTGTGTGGTGATGATACTTCGGTAGAAAATCTTTGTGATGTTGATGCTTTGGTAAATCATCACCGAGTTCCGGCTTTTTGA

Coding sequence (CDS)

ATGGGGGTGGTGAAGATTTCAATGGAGGTGGAGGGGACTTGTAGTAGTAAGGAGGTGGTGGTGATGGAGACGGGGGTGGAGGTGACTTATAATAATAAGGTGGAGGAGGTGATGGAGATGGTGGAGGTGGAGATTTGTAAATATATGGAGGAGGTGGCGATGGAGATGGTGGAGGTGGTGATTTATAGGTATAAGGAGGGGGAGGAGACGGTGATGGAGGTGGTGGTGATTTATAGATATACGGGGGTGGTGGAGAAGGGGACGGTGGAGGAGGTGATTTGTAAACATAGGGAGGTGGTGGTGATGGAGACGGCGGTGGGGGAGACTTATAGACATAGGGAGGTGGTGGTGATGGAGATGGTGGTGGAGGAGATTTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGTGGTGGAGATTTATAGATATAAGGAGGTGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGAGGTGATTTATAGACATAAGGAGGTGGTGGTGACGGAGATGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGAGGTGGAGATTTATAGGTATAAGGAGGGGGAGGTGATGGAGAAGGGGGAGGAGGAGATGTGTAGACATATGGAGGTGGAGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGAGATGGAGATGGTGGTGGAGGAGACTTATAGACATAAGGAGGGGGTGGTGATGGAGAAGGTGGAGGAGGAGATGTGTAGACATATGGAGGTGGTGGAGGAGAGCTATAGACGTAAGGAGGCGGTGGCGATGGAGATGGTGGTGGAGGAGACTTGTAAATGTAGGGAGGTGGTGGTGGGGAATTGTAGATGTAAGGAGGCGGTGGTGGCGATTTGTAGACATAAGGAGGTGGGGGTGGAGATTTATAAATATAAGGAGATGGTGGTGGTGGAGACTTGTAAACATATGATGGCGGTGGAGACTTGTGGTGCTTATATTTTGGTACTGGTGGTGGCTTGTGGTGCTTATACTTTGGCAGTGGTGGTGGCTTGTGGTGGCGGTGATATTTTAGCGGCGGCGGAGGTGTGTGGTGATGATACTTCGGTAGAAAATCTTTGTGATGTTGATGCTTTGGTAAATCATCACCGAGTTCCGGCTTTTTGA

Protein sequence

MGVVKISMEVEGTCSSKEVVVMETGVEVTYNNKVEEVMEMVEVEICKYMEEVAMEMVEVVIYRYKEGEETVMEVVVIYRYTGVVEKGTVEEVICKHREVVVMETAVGETYRHREVVVMEMVVEEICRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVVVEIYRYKEVEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEEVIYRHKEVVVTEMGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVEMEMVVEETYRHKEGVVMEKVEEEMCRHMEVVEESYRRKEAVAMEMVVEETCKCREVVVGNCRCKEAVVAICRHKEVGVEIYKYKEMVVVETCKHMMAVETCGAYILVLVVACGAYTLAVVVACGGGDILAAAEVCGDDTSVENLCDVDALVNHHRVPAF

Homology

[Close]

BLAST of Lsi10G010560 vs. ExPASy TrEMBL
Match: A0A5B6WXT9 (Putative neurofilament heavy protein OS=Gossypium australe OX=47621 GN=EPI10_029866 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.6e-69
Identity = 349/827 (42.20%), Postives = 398/827 (48.13%), Query Frame = 0


Query: 480  MEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVME 539
            M  VEVE  + KE EVME  E   CRHM VE         V  EMVEVE  R+    V E
Sbjct: 1    MVKVEVETSKCKEEEVMEMVEVGTCRHM-VE---------VVREMVEVETCRHMVEVVRE 60

Query: 540  KGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYR 599
              E E CR+M VE      +   +  MVEV   R KE EV E  E   CR  +VEE    
Sbjct: 61   MVEVETCRYM-VEAMREMVEVGTSKNMVEVGTCRCKEEEVREMVEVMTCR-CKVEE---- 120

Query: 600  RKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYK 659
                   EMVEVEIYR KE EV E  E   CRH          K     E VEV   R++
Sbjct: 121  -----VKEMVEVEIYRCKEEEVKEMVEVGTCRH----------KVGEVRETVEVGTCRHR 180

Query: 660  EGEVMEKGEEEMCRHM------EVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEM 719
             GEV EK E   CRH       +VE E+ R KE V  +MVEV   R+K GEV E  E   
Sbjct: 181  VGEVREKVEVGTCRHRVGEVREKVEVETCRHKEEVVTKMVEVGTCRHKVGEVKEMEEVGT 240

Query: 720  CRHM------EVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYR 779
            CRHM       VE E+ R KE V  EMVEV I R KEGEV    E E  +HM VEE    
Sbjct: 241  CRHMVVEVNEMVEVETCRCKEVVVREMVEVGICRCKEGEVRVMVEVETYKHM-VEE---- 300

Query: 780  RKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHM--EVEE----ESYRRKEAVAMEMVEV 839
                   EMVEVE  ++   EV E  E E C+HM  EV+E    E+Y+ KE V  EM +V
Sbjct: 301  -----VKEMVEVETCKHMVEEVKEMVEVETCKHMVEEVKEMVVVETYKCKEEVVREMGKV 360

Query: 840  EIYRYKEGEVMEKGEEEMCRHME------VEEESYRRKEAVAMEMVEVEIYRYKEGEVME 899
               R K   V E  E E+C+  E      VEE + R +E V  +MVEV   R+K GEV E
Sbjct: 361  GTCRCKGEVVKEMVEVEICKCKEEEVREMVEEATCRCREEVVRKMVEVGTCRHKVGEVRE 420

Query: 900  KGEEEMCRHM------EVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEV 959
              E   CRH        VE  + R KE V  EMVEV   R+K  EV E  E   CRHM V
Sbjct: 421  MVEVGTCRHRVGEVRETVEVGTCRHKEEVVTEMVEVVTCRHKVWEVKEMDEVGTCRHMVV 480

Query: 960  EEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEV 1019
            E            EMVEVE  R KE  V E  +  +C          + KE     MVEV
Sbjct: 481  E----------VNEMVEVETCRCKEVVVREMMDVGIC----------KCKEGEVKVMVEV 540

Query: 1020 EIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEM 1079
            E Y++   EV E  E E C+HM VE E+ +       EMV VE Y+ KE  V E GE   
Sbjct: 541  ETYKHMVEEVKEMVEVETCKHM-VEVETCKHIVEEVKEMVVVETYKCKEEVVREMGEVGT 600

Query: 1080 CRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVA 1139
            C          R K  V  EMV VEI + KEGEV E  EE  C          R +E V 
Sbjct: 601  C----------RCKGEVVKEMVVVEICKCKEGEVREMVEEATC----------RCREEVV 660

Query: 1140 MEMVEVEIYRYKEGEVMEKGEEEMCRHM------EVEEESYRRKEAVEMEMVVEETYRHK 1199
             +MVEV   R+K GEV E  E   CRH        VE  + R KE V  EMV   T RHK
Sbjct: 661  RKMVEVGTCRHKVGEVREMVEVGTCRHRVGEVRETVEVGTCRHKEVVVTEMVEVVTCRHK 720

Query: 1200 EGVVMEKVEEEMCRHMEVVEESYRRKEAVAMEMVVEETCKCREVV------VGNCRCKEA 1253
             G V E  E   CRHM VVE +         EMV  ETC+C+EVV      VG CRCKE 
Sbjct: 721  VGEVKEMEEVGTCRHM-VVEVN---------EMVEVETCRCKEVVVREMVEVGICRCKER 731

[Close]

BLAST of Lsi10G010560 vs. ExPASy TrEMBL
Match: A0A5B6WWM0 (Putative neurofilament heavy protein OS=Gossypium australe OX=47621 GN=EPI10_029866 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 2.7e-69
Identity = 349/826 (42.25%), Postives = 398/826 (48.18%), Query Frame = 0


Query: 480  MEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVME 539
            M  VEVE  + KE EVME  E   CRHM VE         V  EMVEVE  R+    V E
Sbjct: 1    MVKVEVETSKCKEEEVMEMVEVGTCRHM-VE---------VVREMVEVETCRHMVEVVRE 60

Query: 540  KGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYR 599
              E E CR+M VE      +   +  MVEV   R KE EV E  E   CR  +VEE    
Sbjct: 61   MVEVETCRYM-VEAMREMVEVGTSKNMVEVGTCRCKEEEVREMVEVMTCR-CKVEE---- 120

Query: 600  RKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYK 659
                   EMVEVEIYR KE EV E  E   CRH          K     E VEV   R++
Sbjct: 121  -----VKEMVEVEIYRCKEEEVKEMVEVGTCRH----------KVGEVRETVEVGTCRHR 180

Query: 660  EGEVMEKGEEEMCRHM------EVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEM 719
             GEV EK E   CRH       +VE E+ R KE V  +MVEV   R+K GEV E  E   
Sbjct: 181  VGEVREKVEVGTCRHRVGEVREKVEVETCRHKEEVVTKMVEVGTCRHKVGEVKEMEEVGT 240

Query: 720  CRHM------EVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYR 779
            CRHM       VE E+ R KE V  EMVEV I R KEGEV    E E  +HM VEE    
Sbjct: 241  CRHMVVEVNEMVEVETCRCKEVVVREMVEVGICRCKEGEVRVMVEVETYKHM-VEE---- 300

Query: 780  RKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHM--EVEE----ESYRRKEAVAMEMVEV 839
                   EMVEVE  ++   EV E  E E C+HM  EV+E    E+Y+ KE V  EM +V
Sbjct: 301  -----VKEMVEVETCKHMVEEVKEMVEVETCKHMVEEVKEMVVVETYKCKEEVVREMGKV 360

Query: 840  EIYRYKEGEVMEKGEEEMCRHME------VEEESYRRKEAVAMEMVEVEIYRYKEGEVME 899
               R K   V E  E E+C+  E      VEE + R +E V  +MVEV   R+K GEV E
Sbjct: 361  GTCRCKGEVVKEMVEVEICKCKEEEVREMVEEATCRCREEVVRKMVEVGTCRHKVGEVRE 420

Query: 900  KGEEEMCRHM------EVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEV 959
              E   CRH        VE  + R KE V  EMVEV   R+K  EV E  E   CRHM V
Sbjct: 421  MVEVGTCRHRVGEVRETVEVGTCRHKEEVVTEMVEVVTCRHKVWEVKEMDEVGTCRHMVV 480

Query: 960  EEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEV 1019
            E            EMVEVE  R KE  V E  +  +C          + KE     MVEV
Sbjct: 481  E----------VNEMVEVETCRCKEVVVREMMDVGIC----------KCKEGEVKVMVEV 540

Query: 1020 EIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEM 1079
            E Y++   EV E  E E C+HM VE E+ +       EMV VE Y+ KE  V E GE   
Sbjct: 541  ETYKHMVEEVKEMVEVETCKHM-VEVETCKHIVEEVKEMVVVETYKCKEEVVREMGEVGT 600

Query: 1080 CRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVA 1139
            C          R K  V  EMV VEI + KEGEV E  EE  C          R +E V 
Sbjct: 601  C----------RCKGEVVKEMVVVEICKCKEGEVREMVEEATC----------RCREEVV 660

Query: 1140 MEMVEVEIYRYKEGEVMEKGEEEMCRHM------EVEEESYRRKEAVEMEMVVEETYRHK 1199
             +MVEV   R+K GEV E  E   CRH        VE  + R KE V  EMV   T RHK
Sbjct: 661  RKMVEVGTCRHKVGEVREMVEVGTCRHRVGEVRETVEVGTCRHKEVVVTEMVEVVTCRHK 720

Query: 1200 EGVVMEKVEEEMCRHMEVVEESYRRKEAVAMEMVVEETCKCREVV------VGNCRCKEA 1254
             G V E  E   CRHM VVE +         EMV  ETC+C+EVV      VG CRCKE 
Sbjct: 721  VGEVKEMEEVGTCRHM-VVEVN---------EMVEVETCRCKEVVVREMVEVGICRCKER 730

[Close]

BLAST of Lsi10G010560 vs. ExPASy TrEMBL
Match: A0A091CTK7 (Lysostaphin OS=Fukomys damarensis OX=885580 GN=H920_15847 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 8.8e-68
Identity = 364/957 (38.04%), Postives = 520/957 (54.34%), Query Frame = 0


Query: 244  MEKGEEEMCRHMEVEEESYRRKEAVAMEMVVVEIYRYKEVEVMEKGEEEMCRHMEVEEES 303
            ME+  EE     E+EEE    +    MEM   E    +E+E ME+ EEE+   ME+EEE 
Sbjct: 1    MEEEMEEETGEEEMEEEELEEE----MEMEEEEEELEEEME-MEEEEEELEEEMEMEEEE 60

Query: 304  YRRKEAVAMEMVEEVIYRHKEVVVTEMGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYR 363
               +E + ME  EE +    E+   E  EEE+   ME+EEE    +E + ME  E E+  
Sbjct: 61   EELEEEMEMEEEEEELEEEMEM---EEEEEELEEEMEMEEEEEELEEEMEMEEEEEEL-- 120

Query: 364  YKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHM 423
             +E   ME+ EEE+   ME+EEE    +E + ME  E E+   +E   ME+ EEE+   M
Sbjct: 121  -EEEMEMEEEEEELEEEMEMEEEEEELEEEMEMEEEEEEL---EEEMEMEEEEEELEEEM 180

Query: 424  EVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMV 483
            E+EEE    +E + ME  E E+   +E   ME+ EEE+   ME+EEE    +E + ME  
Sbjct: 181  EMEEEEEELEEEMEMEEEEEEL---EEEMEMEEEEEELEEEMEMEEEEEELEEEMEMEEE 240

Query: 484  EVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEE 543
            E E+   +E   ME+ EEE+   ME+EEE    +E + ME  E E+   +E   ME+ EE
Sbjct: 241  EEEL---EEEMEMEEEEEELEEEMEMEEEEEELEEEMEMEEEEEEL---EEEMEMEEEEE 300

Query: 544  EMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEA 603
            E+   ME+EEE    +E + ME  E E+   +E   ME+ EEE+   ME+EEE    +E 
Sbjct: 301  ELEEEMEMEEEEEELEEEMEMEEEEEEL---EEEMEMEEEEEELEEEMEMEEEEEELEEE 360

Query: 604  VAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEV 663
            + ME  E E+   +E   ME+ EEE+   ME+EEE    +E + ME  E E+   +E   
Sbjct: 361  MEMEEEEEEL---EEEMEMEEEEEELEEEMEMEEEEEELEEEMEMEEEEEEL---EEEME 420

Query: 664  MEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEES 723
            ME+ EEE+   ME+EEE    +E + ME  E E+   +E   ME+ EEE+   ME+EEE 
Sbjct: 421  MEEEEEELEEEMEMEEEEEELEEEMEMEEEEEEL---EEEMEMEEEEEELEEEMEMEEEE 480

Query: 724  YRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYR 783
               +E + ME  E E+   +E   ME+ EEE+   ME+EEE    +E + ME  E E+  
Sbjct: 481  EELEEEMEMEEEEEEL---EEEMEMEEEEEELEEEMEMEEEEEELEEEMEMEEEEEEL-- 540

Query: 784  YKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHM 843
             +E   ME+ EEE+   ME+EEE    +E + ME  E E+   +E   ME+ EEE+   M
Sbjct: 541  -EEEMEMEEEEEELEEEMEMEEEEEELEEEMEMEEEEEEL---EEEMEMEEEEEELEEEM 600

Query: 844  EVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMV 903
            E+EEE    +E + ME  E E+   +E   ME+ EEE+   ME+EEE    +E + ME  
Sbjct: 601  EMEEEEEELEEEMEMEEEEEEL---EEEMEMEEEEEELEEEMEMEEEEEELEEEMEMEEE 660

Query: 904  EVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEE 963
            E E+   +E   ME+ EEE+   ME+EEE    +E + ME  E E+   +E   ME+ EE
Sbjct: 661  EEEL---EEEMEMEEEEEELEEEMEMEEEEEELEEEMEMEEEEEEL---EEEMEMEEEEE 720

Query: 964  EMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEA 1023
            E+   ME+EEE    +E + ME  E E+   +E   ME+ EEE+   ME+EEE    +E 
Sbjct: 721  ELEEEMEMEEEEEELEEEMEMEEEEEEL---EEEMEMEEEEEELEEEMEMEEEEEELEEE 780

Query: 1024 VAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEV 1083
            + ME  E E+   +E   ME+ EEE+   ME+EEE    +E + ME  E E+   +E   
Sbjct: 781  MEMEEEEEEL---EEEMEMEEEEEELEEEMEMEEEEEELEEEMEMEEEEEEL---EEEME 840

Query: 1084 MEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEES 1143
            ME+ EEE+   ME+EEE    +E + ME  E E+   +E   ME+ EEE+   ME+EEE 
Sbjct: 841  MEEEEEELEEEMEMEEEEEELEEEMEMEEEEEEL---EEEMEMEEEEEELEEEMEMEEEE 889

Query: 1144 YRRKEAVEMEMVVEETYRHKEGVVMEKVEEEMCRHMEVVEESYRRKEAVAMEMVVEE 1201
               +E +EME   EE    +E + ME+ EEE+   ME+ EE    +E + ME   EE
Sbjct: 901  EELEEEMEME---EEEEELEEEMEMEEEEEELEEEMEMEEEEEELEEEMEMEEEEEE 889

[Close]

BLAST of Lsi10G010560 vs. ExPASy TrEMBL
Match: A0A5B6WWY2 (Putative neurofilament heavy protein OS=Gossypium australe OX=47621 GN=EPI10_029866 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.6e-61
Identity = 311/737 (42.20%), Postives = 350/737 (47.49%), Query Frame = 0


Query: 564  MEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVME 623
            M  VEVE  + KE EVME  E   CRHM VE         V  EMVEVE  R+    V E
Sbjct: 1    MVKVEVETSKCKEEEVMEMVEVGTCRHM-VE---------VVREMVEVETCRHMVEVVRE 60

Query: 624  KGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYR 683
              E E CR+M VE      +   +  MVEV   R KE EV E  E   CR  +VEE    
Sbjct: 61   MVEVETCRYM-VEAMREMVEVGTSKNMVEVGTCRCKEEEVREMVEVMTCR-CKVEE---- 120

Query: 684  RKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYK 743
                   EMVEVEIYR KE EV E  E   CRH          K     E VEV   R++
Sbjct: 121  -----VKEMVEVEIYRCKEEEVKEMVEVGTCRH----------KVGEVRETVEVGTCRHR 180

Query: 744  EGEVMEKGEEEMCRHM------EVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEM 803
             GEV EK E   CRH       +VE E+ R KE V  +MVEV   R+K GEV E  E   
Sbjct: 181  VGEVREKVEVGTCRHRVGEVREKVEVETCRHKEEVVTKMVEVGTCRHKVGEVKEMEEVGT 240

Query: 804  CRHM------EVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHM------EV 863
            CRHM       VE E+ R KE V  EMVEV I R KEGEV    E E  +HM       V
Sbjct: 241  CRHMVVEVNEMVEVETCRCKEVVVREMVEVGICRCKEGEVRVMVEVETYKHMVEEVKEMV 300

Query: 864  EEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHM------EVEEESYRRKEAVA 923
            E E+ +       EMVEV   R+K GEV E  E   CRH        VE  + R KE V 
Sbjct: 301  EVETCKHMVEEVKEMVEVGTCRHKVGEVREMVEVGTCRHRVGEVRETVEVGTCRHKEEVV 360

Query: 924  MEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVME 983
             EMVEV   R+K  EV E  E   CRHM VE            EMVEVE  R KE  V E
Sbjct: 361  TEMVEVVTCRHKVWEVKEMDEVGTCRHMVVE----------VNEMVEVETCRCKEVVVRE 420

Query: 984  KGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYR 1043
              +  +C          + KE     MVEVE Y++   EV E  E E C+HM VE E+ +
Sbjct: 421  MMDVGIC----------KCKEGEVKVMVEVETYKHMVEEVKEMVEVETCKHM-VEVETCK 480

Query: 1044 RKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYK 1103
                   EMV VE Y+ KE  V E GE   C          R K  V  EMV VEI + K
Sbjct: 481  HIVEEVKEMVVVETYKCKEEVVREMGEVGTC----------RCKGEVVKEMVVVEICKCK 540

Query: 1104 EGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHM-- 1163
            EGEV E  EE  C          R +E V  +MVEV   R+K GEV E  E   CRH   
Sbjct: 541  EGEVREMVEEATC----------RCREEVVRKMVEVGTCRHKVGEVREMVEVGTCRHRVG 600

Query: 1164 ----EVEEESYRRKEAVEMEMVVEETYRHKEGVVMEKVEEEMCRHMEVVEESYRRKEAVA 1223
                 VE  + R KE V  EMV   T RHK G V E  E   CRHM VVE +        
Sbjct: 601  EVRETVEVGTCRHKEVVVTEMVEVVTCRHKVGEVKEMEEVGTCRHM-VVEVN-------- 651

Query: 1224 MEMVVEETCKCREVV------VGNCRCKEAVVAICRHKEVGVEIYKY-----KEMVVVET 1253
             EMV  ETC+C+EVV      VG CRCKE  V +     V VE YK+     KEMV VET
Sbjct: 661  -EMVEVETCRCKEVVVREMVEVGICRCKEREVRVM----VEVETYKHMVEEVKEMVEVET 651

[Close]

BLAST of Lsi10G010560 vs. ExPASy TrEMBL
Match: A0A5B6WZ04 (Putative neurofilament heavy protein OS=Gossypium australe OX=47621 GN=EPI10_029866 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 9.1e-57
Identity = 292/708 (41.24%), Postives = 332/708 (46.89%), Query Frame = 0


Query: 582  KGEEEMCRHM-EVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESY 641
            K EEE  + M +VE E+ + KE   MEMVEV   R+    V E  E E CRHM     + 
Sbjct: 21   KHEEESVKEMVKVEVETSKCKEEEVMEMVEVGTCRHMVEVVREMVEVETCRHM---VGTC 80

Query: 642  RRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRY 701
            R KE    EMVEV   R K  EV E           VE E YR KE    EMVEV   R+
Sbjct: 81   RCKEEEVREMVEVMTCRCKVEEVKEM----------VEVEIYRCKEEEVKEMVEVGTCRH 140

Query: 702  KEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHM- 761
            K GEV E  E   CRHM VE            EMVEVE Y++   EV E  E E C+HM 
Sbjct: 141  KVGEVKEMEEVGTCRHMVVE----------VNEMVEVETYKHMVEEVKEMVEVETCKHMV 200

Query: 762  -----EVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAV 821
                  VE E+ +       EMV VE Y+ KE  V E G+   C          R K  V
Sbjct: 201  EEVKEMVEVETCKHMVEEVKEMVVVETYKCKEEVVREMGKVGTC----------RCKGEV 260

Query: 822  AMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVM 881
              EMVEVEI + KE EV E  EE  C          R +E V  +MVEV   R+K GEV 
Sbjct: 261  VKEMVEVEICKCKEEEVREMVEEATC----------RCREEVVRKMVEVGTCRHKVGEVR 320

Query: 882  EKGEEEMCRHM------EVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHME 941
            E  E   CRH        VE  + R KE V  EMVEV   R+K  EV E  E   CRHM 
Sbjct: 321  EMVEVGTCRHRVGEVRETVEVGTCRHKEEVVTEMVEVVTCRHKVWEVKEMDEVGTCRHMV 380

Query: 942  VEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVE 1001
            VE            EMVEVE  R KE  V E  +  +C          + KE     MVE
Sbjct: 381  VE----------VNEMVEVETCRCKEVVVREMMDVGIC----------KCKEGEVKVMVE 440

Query: 1002 VEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEE 1061
            VE Y++   EV E  E E C+HM VE E+ +       EMV VE Y+ KE  V E GE  
Sbjct: 441  VETYKHMVEEVKEMVEVETCKHM-VEVETCKHIVEEVKEMVVVETYKCKEEVVREMGEVG 500

Query: 1062 MCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAV 1121
             C          R K  V  EMV VEI + KEGEV E  EE  C          R +E V
Sbjct: 501  TC----------RCKGEVVKEMVVVEICKCKEGEVREMVEEATC----------RCREEV 560

Query: 1122 AMEMVEVEIYRYKEGEVMEKGEEEMCRHM------EVEEESYRRKEAVEMEMVVEETYRH 1181
              +MVEV   R+K GEV E  E   CRH        VE  + R KE V  EMV   T RH
Sbjct: 561  VRKMVEVGTCRHKVGEVREMVEVGTCRHRVGEVRETVEVGTCRHKEVVVTEMVEVVTCRH 620

Query: 1182 KEGVVMEKVEEEMCRHMEVVEESYRRKEAVAMEMVVEETCKCREVV------VGNCRCKE 1241
            K G V E  E   CRHM VVE +         EMV  ETC+C+EVV      VG CRCKE
Sbjct: 621  KVGEVKEMEEVGTCRHM-VVEVN---------EMVEVETCRCKEVVVREMVEVGICRCKE 630

Query: 1242 AVVAICRHKEVGVEIYKY-----KEMVVVETCKHM-------MAVETC 1253
              V +     V VE YK+     KEMV VETCKHM       + VETC
Sbjct: 681  REVRVM----VEVETYKHMVEEVKEMVEVETCKHMVEEVKEIVEVETC 630

[Close]

BLAST of Lsi10G010560 vs. NCBI nr
Match: KAG5517578.1 (hypothetical protein RHGRI_038096 [Rhododendron griersonianum])

HSP 1 Score: 314.3 bits (804), Expect = 4.9e-81
Identity = 386/987 (39.11%), Postives = 457/987 (46.30%), Query Frame = 0


Query: 258  EEESYRRKEAVAMEMVVVEIYRYKEVEVMEKGEEEMCRHME------VEEESYRRKEAVA 317
            E ESY   E V M  VV  I  +KEV V EK   E C++M       V   +    E   
Sbjct: 17   EVESYSSMEVVGMVRVVGVICTHKEVGVKEKAVVETCKYMAAGVRGMVVAVTCIHMEEEV 76

Query: 318  MEMVEEVIYRHKEVVVTEMGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVME 377
            M M E  I R KEV V EM E  +C H          KE V MEMV  EIY+YK  EV E
Sbjct: 77   MGMEEVGICRRKEVGVKEMVEVAICTH----------KEVVEMEMVVAEIYKYKVVEVKE 136

Query: 378  KGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYR 437
                  C HM          E V MEM EVE  ++KE  V       +          Y+
Sbjct: 137  MVAAATCIHM----------EEVVMEMEEVETCKHKEAVVTAMAVVGI----------YK 196

Query: 438  RKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEE------ESYRRKEAVAMEMVEV 497
            R     MEMV V  Y+    EVME+   E+C+H EV          Y+      MEMV V
Sbjct: 197  RMAVGVMEMVGVVTYKRMVEEVMERVVVEICKHKEVVAMVMAVVGLYKHMAVGVMEMVGV 256

Query: 498  EIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEM 557
               +Y E EVME    E+CRHM          E VAME VEVEI R+K  EV E  E E+
Sbjct: 257  VTCKYMEEEVMEMAVVEICRHM----------EGVAMEKVEVEICRHKAVEVKEMVEVEI 316

Query: 558  CRHMEV------EEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYR 617
            C+HMEV        E Y+      MEMV V   +  E EVME+   E+C+H         
Sbjct: 317  CKHMEVVVTEKAVVEIYKHMAVGVMEMVGVVTCKRMEEEVMERVVVEICKH--------- 376

Query: 618  RKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEE------ESYRRKEAVAMEMVEV 677
             KE VAME   VEI R+K   V E    E+C+H EV          Y+      MEMV V
Sbjct: 377  -KEVVAMEKAVVEICRHKVVGVKEMVVVEICKHKEVVAMVMAVVGIYKHMAVGVMEMVGV 436

Query: 678  EIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEM 737
               +Y E EVME    E+CRHM          E VAME VEVEI R+K  EV E  E E+
Sbjct: 437  VTCKYMEEEVMEMAVVEICRHM----------EGVAMEKVEVEICRHKAVEVKETVEVEI 496

Query: 738  CRHMEV------EEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYR 797
            C+HMEV        E Y+      MEMV V   +  E EVME+   E+C+H         
Sbjct: 497  CKHMEVVVTEKAVVEIYKHMAVGVMEMVGVVTCKRMEEEVMERVVVEICKH--------- 556

Query: 798  RKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYK 857
             KE VAME   VEI R+K   V E    E+C+H          KE VAME   VEI R+K
Sbjct: 557  -KEVVAMEKAVVEICRHKVVGVKEMVVVEICKH----------KEVVAMEKAVVEICRHK 616

Query: 858  EGEVMEKGEEEMCRHME------VEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEM 917
               V E    E+C H E      V    Y+      ME V V   +  E EVME+   E+
Sbjct: 617  VVGVKEMVVVEICTHKEAGVMVKVVVGIYKHMAVGVMETVGVVTCKRMEEEVMERVVVEI 676

Query: 918  CRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVA 977
            C+H          KE V ME  EVEIYR K  EVME    E+CRHM          E V 
Sbjct: 677  CKH----------KEVVVMEKAEVEIYRCKVVEVMEMAVVEICRHM----------EGVV 736

Query: 978  MEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVME 1037
            ME VEVEI R+K  EV E  E E+CRHMEV          V ME   V IY++    VME
Sbjct: 737  MEKVEVEICRHKVVEVKETVEVEICRHMEV----------VVMEKAVVGIYKHMAVGVME 796

Query: 1038 KGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESY- 1097
                  C+ ME E           ME V VEIY+YKE   MEK    +C+   VE +   
Sbjct: 797  MVGVVTCKCMEEE----------VMERVVVEIYKYKEVVAMEKAVVAICKRKVVEVKEMV 856

Query: 1098 -----RRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRH--MEVEEESY----RRKEAVA 1157
                 R    VAME V V I R+ EG VMEK   E+C+H  +EV+E +     R KE   
Sbjct: 857  VVGICRHMVEVAMEKVAVGICRHMEGAVMEKAVVEICKHKVVEVKETAVVGICRHKEVEV 864

Query: 1158 MEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVEMEMVVEETYRHKEGVVME 1197
             E   V I R+  G  MEKG  E+CR ME        +E + ME V  ETYRH+  V  E
Sbjct: 917  TEKAVVGICRHMAGVAMEKGAVEICRRME--------EEVMGMEAV--ETYRHRVAVGKE 864

[Close]

BLAST of Lsi10G010560 vs. NCBI nr
Match: KAA3485894.1 (putative neurofilament heavy protein [Gossypium australe])

HSP 1 Score: 275.0 bits (702), Expect = 3.3e-69
Identity = 349/827 (42.20%), Postives = 398/827 (48.13%), Query Frame = 0


Query: 480  MEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVME 539
            M  VEVE  + KE EVME  E   CRHM VE         V  EMVEVE  R+    V E
Sbjct: 1    MVKVEVETSKCKEEEVMEMVEVGTCRHM-VE---------VVREMVEVETCRHMVEVVRE 60

Query: 540  KGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYR 599
              E E CR+M VE      +   +  MVEV   R KE EV E  E   CR  +VEE    
Sbjct: 61   MVEVETCRYM-VEAMREMVEVGTSKNMVEVGTCRCKEEEVREMVEVMTCR-CKVEE---- 120

Query: 600  RKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYK 659
                   EMVEVEIYR KE EV E  E   CRH          K     E VEV   R++
Sbjct: 121  -----VKEMVEVEIYRCKEEEVKEMVEVGTCRH----------KVGEVRETVEVGTCRHR 180

Query: 660  EGEVMEKGEEEMCRHM------EVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEM 719
             GEV EK E   CRH       +VE E+ R KE V  +MVEV   R+K GEV E  E   
Sbjct: 181  VGEVREKVEVGTCRHRVGEVREKVEVETCRHKEEVVTKMVEVGTCRHKVGEVKEMEEVGT 240

Query: 720  CRHM------EVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYR 779
            CRHM       VE E+ R KE V  EMVEV I R KEGEV    E E  +HM VEE    
Sbjct: 241  CRHMVVEVNEMVEVETCRCKEVVVREMVEVGICRCKEGEVRVMVEVETYKHM-VEE---- 300

Query: 780  RKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHM--EVEE----ESYRRKEAVAMEMVEV 839
                   EMVEVE  ++   EV E  E E C+HM  EV+E    E+Y+ KE V  EM +V
Sbjct: 301  -----VKEMVEVETCKHMVEEVKEMVEVETCKHMVEEVKEMVVVETYKCKEEVVREMGKV 360

Query: 840  EIYRYKEGEVMEKGEEEMCRHME------VEEESYRRKEAVAMEMVEVEIYRYKEGEVME 899
               R K   V E  E E+C+  E      VEE + R +E V  +MVEV   R+K GEV E
Sbjct: 361  GTCRCKGEVVKEMVEVEICKCKEEEVREMVEEATCRCREEVVRKMVEVGTCRHKVGEVRE 420

Query: 900  KGEEEMCRHM------EVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEV 959
              E   CRH        VE  + R KE V  EMVEV   R+K  EV E  E   CRHM V
Sbjct: 421  MVEVGTCRHRVGEVRETVEVGTCRHKEEVVTEMVEVVTCRHKVWEVKEMDEVGTCRHMVV 480

Query: 960  EEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEV 1019
            E            EMVEVE  R KE  V E  +  +C          + KE     MVEV
Sbjct: 481  E----------VNEMVEVETCRCKEVVVREMMDVGIC----------KCKEGEVKVMVEV 540

Query: 1020 EIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEM 1079
            E Y++   EV E  E E C+HM VE E+ +       EMV VE Y+ KE  V E GE   
Sbjct: 541  ETYKHMVEEVKEMVEVETCKHM-VEVETCKHIVEEVKEMVVVETYKCKEEVVREMGEVGT 600

Query: 1080 CRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVA 1139
            C          R K  V  EMV VEI + KEGEV E  EE  C          R +E V 
Sbjct: 601  C----------RCKGEVVKEMVVVEICKCKEGEVREMVEEATC----------RCREEVV 660

Query: 1140 MEMVEVEIYRYKEGEVMEKGEEEMCRHM------EVEEESYRRKEAVEMEMVVEETYRHK 1199
             +MVEV   R+K GEV E  E   CRH        VE  + R KE V  EMV   T RHK
Sbjct: 661  RKMVEVGTCRHKVGEVREMVEVGTCRHRVGEVRETVEVGTCRHKEVVVTEMVEVVTCRHK 720

Query: 1200 EGVVMEKVEEEMCRHMEVVEESYRRKEAVAMEMVVEETCKCREVV------VGNCRCKEA 1253
             G V E  E   CRHM VVE +         EMV  ETC+C+EVV      VG CRCKE 
Sbjct: 721  VGEVKEMEEVGTCRHM-VVEVN---------EMVEVETCRCKEVVVREMVEVGICRCKER 731

[Close]

BLAST of Lsi10G010560 vs. NCBI nr
Match: KAA3485893.1 (putative neurofilament heavy protein [Gossypium australe])

HSP 1 Score: 274.2 bits (700), Expect = 5.7e-69
Identity = 349/826 (42.25%), Postives = 398/826 (48.18%), Query Frame = 0


Query: 480  MEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVME 539
            M  VEVE  + KE EVME  E   CRHM VE         V  EMVEVE  R+    V E
Sbjct: 1    MVKVEVETSKCKEEEVMEMVEVGTCRHM-VE---------VVREMVEVETCRHMVEVVRE 60

Query: 540  KGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYR 599
              E E CR+M VE      +   +  MVEV   R KE EV E  E   CR  +VEE    
Sbjct: 61   MVEVETCRYM-VEAMREMVEVGTSKNMVEVGTCRCKEEEVREMVEVMTCR-CKVEE---- 120

Query: 600  RKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYK 659
                   EMVEVEIYR KE EV E  E   CRH          K     E VEV   R++
Sbjct: 121  -----VKEMVEVEIYRCKEEEVKEMVEVGTCRH----------KVGEVRETVEVGTCRHR 180

Query: 660  EGEVMEKGEEEMCRHM------EVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEM 719
             GEV EK E   CRH       +VE E+ R KE V  +MVEV   R+K GEV E  E   
Sbjct: 181  VGEVREKVEVGTCRHRVGEVREKVEVETCRHKEEVVTKMVEVGTCRHKVGEVKEMEEVGT 240

Query: 720  CRHM------EVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYR 779
            CRHM       VE E+ R KE V  EMVEV I R KEGEV    E E  +HM VEE    
Sbjct: 241  CRHMVVEVNEMVEVETCRCKEVVVREMVEVGICRCKEGEVRVMVEVETYKHM-VEE---- 300

Query: 780  RKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHM--EVEE----ESYRRKEAVAMEMVEV 839
                   EMVEVE  ++   EV E  E E C+HM  EV+E    E+Y+ KE V  EM +V
Sbjct: 301  -----VKEMVEVETCKHMVEEVKEMVEVETCKHMVEEVKEMVVVETYKCKEEVVREMGKV 360

Query: 840  EIYRYKEGEVMEKGEEEMCRHME------VEEESYRRKEAVAMEMVEVEIYRYKEGEVME 899
               R K   V E  E E+C+  E      VEE + R +E V  +MVEV   R+K GEV E
Sbjct: 361  GTCRCKGEVVKEMVEVEICKCKEEEVREMVEEATCRCREEVVRKMVEVGTCRHKVGEVRE 420

Query: 900  KGEEEMCRHM------EVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEV 959
              E   CRH        VE  + R KE V  EMVEV   R+K  EV E  E   CRHM V
Sbjct: 421  MVEVGTCRHRVGEVRETVEVGTCRHKEEVVTEMVEVVTCRHKVWEVKEMDEVGTCRHMVV 480

Query: 960  EEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEV 1019
            E            EMVEVE  R KE  V E  +  +C          + KE     MVEV
Sbjct: 481  E----------VNEMVEVETCRCKEVVVREMMDVGIC----------KCKEGEVKVMVEV 540

Query: 1020 EIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEM 1079
            E Y++   EV E  E E C+HM VE E+ +       EMV VE Y+ KE  V E GE   
Sbjct: 541  ETYKHMVEEVKEMVEVETCKHM-VEVETCKHIVEEVKEMVVVETYKCKEEVVREMGEVGT 600

Query: 1080 CRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVA 1139
            C          R K  V  EMV VEI + KEGEV E  EE  C          R +E V 
Sbjct: 601  C----------RCKGEVVKEMVVVEICKCKEGEVREMVEEATC----------RCREEVV 660

Query: 1140 MEMVEVEIYRYKEGEVMEKGEEEMCRHM------EVEEESYRRKEAVEMEMVVEETYRHK 1199
             +MVEV   R+K GEV E  E   CRH        VE  + R KE V  EMV   T RHK
Sbjct: 661  RKMVEVGTCRHKVGEVREMVEVGTCRHRVGEVRETVEVGTCRHKEVVVTEMVEVVTCRHK 720

Query: 1200 EGVVMEKVEEEMCRHMEVVEESYRRKEAVAMEMVVEETCKCREVV------VGNCRCKEA 1254
             G V E  E   CRHM VVE +         EMV  ETC+C+EVV      VG CRCKE 
Sbjct: 721  VGEVKEMEEVGTCRHM-VVEVN---------EMVEVETCRCKEVVVREMVEVGICRCKER 730

[Close]

BLAST of Lsi10G010560 vs. NCBI nr
Match: KFO22764.1 (Lysostaphin [Fukomys damarensis])

HSP 1 Score: 269.2 bits (687), Expect = 1.8e-67
Identity = 364/957 (38.04%), Postives = 520/957 (54.34%), Query Frame = 0


Query: 244  MEKGEEEMCRHMEVEEESYRRKEAVAMEMVVVEIYRYKEVEVMEKGEEEMCRHMEVEEES 303
            ME+  EE     E+EEE    +    MEM   E    +E+E ME+ EEE+   ME+EEE 
Sbjct: 1    MEEEMEEETGEEEMEEEELEEE----MEMEEEEEELEEEME-MEEEEEELEEEMEMEEEE 60

Query: 304  YRRKEAVAMEMVEEVIYRHKEVVVTEMGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYR 363
               +E + ME  EE +    E+   E  EEE+   ME+EEE    +E + ME  E E+  
Sbjct: 61   EELEEEMEMEEEEEELEEEMEM---EEEEEELEEEMEMEEEEEELEEEMEMEEEEEEL-- 120

Query: 364  YKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHM 423
             +E   ME+ EEE+   ME+EEE    +E + ME  E E+   +E   ME+ EEE+   M
Sbjct: 121  -EEEMEMEEEEEELEEEMEMEEEEEELEEEMEMEEEEEEL---EEEMEMEEEEEELEEEM 180

Query: 424  EVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMV 483
            E+EEE    +E + ME  E E+   +E   ME+ EEE+   ME+EEE    +E + ME  
Sbjct: 181  EMEEEEEELEEEMEMEEEEEEL---EEEMEMEEEEEELEEEMEMEEEEEELEEEMEMEEE 240

Query: 484  EVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEE 543
            E E+   +E   ME+ EEE+   ME+EEE    +E + ME  E E+   +E   ME+ EE
Sbjct: 241  EEEL---EEEMEMEEEEEELEEEMEMEEEEEELEEEMEMEEEEEEL---EEEMEMEEEEE 300

Query: 544  EMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEA 603
            E+   ME+EEE    +E + ME  E E+   +E   ME+ EEE+   ME+EEE    +E 
Sbjct: 301  ELEEEMEMEEEEEELEEEMEMEEEEEEL---EEEMEMEEEEEELEEEMEMEEEEEELEEE 360

Query: 604  VAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEV 663
            + ME  E E+   +E   ME+ EEE+   ME+EEE    +E + ME  E E+   +E   
Sbjct: 361  MEMEEEEEEL---EEEMEMEEEEEELEEEMEMEEEEEELEEEMEMEEEEEEL---EEEME 420

Query: 664  MEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEES 723
            ME+ EEE+   ME+EEE    +E + ME  E E+   +E   ME+ EEE+   ME+EEE 
Sbjct: 421  MEEEEEELEEEMEMEEEEEELEEEMEMEEEEEEL---EEEMEMEEEEEELEEEMEMEEEE 480

Query: 724  YRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYR 783
               +E + ME  E E+   +E   ME+ EEE+   ME+EEE    +E + ME  E E+  
Sbjct: 481  EELEEEMEMEEEEEEL---EEEMEMEEEEEELEEEMEMEEEEEELEEEMEMEEEEEEL-- 540

Query: 784  YKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHM 843
             +E   ME+ EEE+   ME+EEE    +E + ME  E E+   +E   ME+ EEE+   M
Sbjct: 541  -EEEMEMEEEEEELEEEMEMEEEEEELEEEMEMEEEEEEL---EEEMEMEEEEEELEEEM 600

Query: 844  EVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMV 903
            E+EEE    +E + ME  E E+   +E   ME+ EEE+   ME+EEE    +E + ME  
Sbjct: 601  EMEEEEEELEEEMEMEEEEEEL---EEEMEMEEEEEELEEEMEMEEEEEELEEEMEMEEE 660

Query: 904  EVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEE 963
            E E+   +E   ME+ EEE+   ME+EEE    +E + ME  E E+   +E   ME+ EE
Sbjct: 661  EEEL---EEEMEMEEEEEELEEEMEMEEEEEELEEEMEMEEEEEEL---EEEMEMEEEEE 720

Query: 964  EMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEA 1023
            E+   ME+EEE    +E + ME  E E+   +E   ME+ EEE+   ME+EEE    +E 
Sbjct: 721  ELEEEMEMEEEEEELEEEMEMEEEEEEL---EEEMEMEEEEEELEEEMEMEEEEEELEEE 780

Query: 1024 VAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEV 1083
            + ME  E E+   +E   ME+ EEE+   ME+EEE    +E + ME  E E+   +E   
Sbjct: 781  MEMEEEEEEL---EEEMEMEEEEEELEEEMEMEEEEEELEEEMEMEEEEEEL---EEEME 840

Query: 1084 MEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEES 1143
            ME+ EEE+   ME+EEE    +E + ME  E E+   +E   ME+ EEE+   ME+EEE 
Sbjct: 841  MEEEEEELEEEMEMEEEEEELEEEMEMEEEEEEL---EEEMEMEEEEEELEEEMEMEEEE 889

Query: 1144 YRRKEAVEMEMVVEETYRHKEGVVMEKVEEEMCRHMEVVEESYRRKEAVAMEMVVEE 1201
               +E +EME   EE    +E + ME+ EEE+   ME+ EE    +E + ME   EE
Sbjct: 901  EELEEEMEME---EEEEELEEEMEMEEEEEELEEEMEMEEEEEELEEEMEMEEEEEE 889

[Close]

BLAST of Lsi10G010560 vs. NCBI nr
Match: KAG4167772.1 (hypothetical protein ERO13_A13G216401v2 [Gossypium hirsutum])

HSP 1 Score: 265.0 bits (676), Expect = 3.4e-66
Identity = 351/884 (39.71%), Postives = 407/884 (46.04%), Query Frame = 0


Query: 12  GTCSSKEVVVMETGVEVTYNNKVEEVMEMVEVEICKYMEEVAMEMVEVVIYRYKEGEETV 71
           GTC     VV E     TY + VE V EMVEVE C+++ EV MEMVEV   R KE E   
Sbjct: 7   GTCRHMVEVVREIVEVGTYRHMVEVVREMVEVETCRHVVEVVMEMVEVGTCRCKEEEVRE 66

Query: 72  MEVVVIYRYTGVVEKGTVEEVICKHREVVVMETAVGETYRHREVVVMEMVVEEICRHMEV 131
           M                VE V C+ +E VV E     T R++   V +MV    CRH   
Sbjct: 67  M----------------VEVVTCRCKEEVVREMVEAVTCRYKVDEVKKMVEVGTCRH--- 126

Query: 132 EEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEV 191
                  +  V  EM EV    ++   V E  E   CRHM  E            EMVEV
Sbjct: 127 -------RVEVVREMAEVGTCIHRVEAVREMEEVGTCRHMFGE----------VREMVEV 186

Query: 192 EIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEM 251
              R + GEV E  E   CRH          KE V MEMVEV   R+KE EV E G E  
Sbjct: 187 GTCRRRVGEVRETVEVGTCRH----------KEEVVMEMVEVGTCRHKEEEVREMGVEVT 246

Query: 252 CRHMEVEEESYRRKEAVAMEMVVVEIYRYKEVEVMEKGEEEMCRHMEVEEESYRRKEAVA 311
           C          R +E V  EMV V   R+K  EV +  E   CRH          KE V 
Sbjct: 247 C----------RCREEVVREMVEVGTCRHKVGEVRKTVEVGTCRH----------KEEVV 306

Query: 312 MEMVEEVIYRHKEVVVTEMGEEEMCRHMEVE------EESYRRKEAVAMEMVEVEIYRYK 371
            EMV EV  R KE VV E+ E   CRH  VE       E+YR KE +  EMVEV   R +
Sbjct: 307 TEMVVEVTCRCKEEVVREVVEVGTCRHKVVEVRETVKVETYRHKEEMVTEMVEVGTCRRR 366

Query: 372 EGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEV 431
            GEV E         +EVE  + R KE V MEMVEVE  R+K GEV E  E   CRHM V
Sbjct: 367 VGEVRET--------VEVEVGTCRHKEEVVMEMVEVETCRHKMGEVKEMEEVGTCRHMVV 426

Query: 432 EEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHM------EVEEESYRRKEAVA 491
           E E+ + KE V  EMVEVEI + KEGEV    E E  RHM       VE E+ R      
Sbjct: 427 EVETCKCKEVVVREMVEVEICKCKEGEVRVMVEVETYRHMVEEAKEMVEVETCRNMIEGV 486

Query: 492 MEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEE-------ESYRRKEAVAMEMVEVEIYRY 551
            EMV VE  ++   EV +  + E C+HM VEE       E+Y+ KE V  EMVEV   R 
Sbjct: 487 NEMVGVETCKHMVEEVKKMVDVETCKHM-VEETKEMVVVETYKCKEEVVREMVEVGTCRC 546

Query: 552 KEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHME 611
           +   V E  E   CRHM  E            +MVEVEI   KE EV E   E  CR+  
Sbjct: 547 RGEVVKEMVEVGTCRHMVGE----------VKKMVEVEICICKEEEVREMMVEVTCRY-- 606

Query: 612 VEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHME------VEEESYRRKEAV 671
                   +E V  EMVEV   R+K GEV +  E   CRH E      V E + R +E V
Sbjct: 607 --------REEVVREMVEVGTCRHKVGEVRKTVEVGTCRHKEDVVTEIVVEVTCRCREDV 666

Query: 672 AMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVM 731
             EMVEV   R+K GEV E  E   CRH          KE V  EMVEV   R+  GEV 
Sbjct: 667 VREMVEVGTCRHKVGEVRETVEVGTCRH----------KEEVVTEMVEVGTCRHMVGEVR 726

Query: 732 EKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESY 791
           E  E   C           R+     E VEVE  R+K        +E M + +EV    Y
Sbjct: 727 EMVEVGTC----------TRRVGEVKETVEVETCRHK--------KEVMTKTVEVGTCKY 747

Query: 792 RRKEAVAMEMVEVEIYRYKEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRY 851
              E   M  VEVE Y++   EV E  E E C+HM VEE           EMV VE Y+ 
Sbjct: 787 MVNEVREMVEVEVETYKHTVEEVKEMVEVETCKHM-VEE---------VKEMVVVETYKC 747

Query: 852 KEGEVMEKGEEEMCRHMEVEEESYRRKEAVAMEMVEVEIYRYKE 871
           K         EE+ R M VE  +YR K  V  EMVEV I RYKE
Sbjct: 847 K---------EEVVRKM-VEVGTYRCKGEVVKEMVEVGICRYKE 747

The following BLAST results are available for this feature:

BLAST of Lsi10G010560 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi10G010560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5B6WXT9	1.6e-69	42.20	Putative neurofilament heavy protein OS=Gossypium australe OX=47621 GN=EPI10_029...	[more]
A0A5B6WWM0	2.7e-69	42.25	Putative neurofilament heavy protein OS=Gossypium australe OX=47621 GN=EPI10_029...	[more]
A0A091CTK7	8.8e-68	38.04	Lysostaphin OS=Fukomys damarensis OX=885580 GN=H920_15847 PE=4 SV=1	[more]
A0A5B6WWY2	1.6e-61	42.20	Putative neurofilament heavy protein OS=Gossypium australe OX=47621 GN=EPI10_029...	[more]
A0A5B6WZ04	9.1e-57	41.24	Putative neurofilament heavy protein OS=Gossypium australe OX=47621 GN=EPI10_029...	[more]

BLAST of Lsi10G010560 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG5517578.1	4.9e-81	39.11	hypothetical protein RHGRI_038096 [Rhododendron griersonianum]	[more]
KAA3485894.1	3.3e-69	42.20	putative neurofilament heavy protein [Gossypium australe]	[more]
KAA3485893.1	5.7e-69	42.25	putative neurofilament heavy protein [Gossypium australe]	[more]
KFO22764.1	1.8e-67	38.04	Lysostaphin [Fukomys damarensis]	[more]
KAG4167772.1	3.4e-66	39.71	hypothetical protein ERO13_A13G216401v2 [Gossypium hirsutum]	[more]

BLAST of Lsi10G010560 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR39308:SF3	SUBFAMILY NOT NAMED	coord: 970..1150
None	No IPR available	PANTHER	PTHR39308	FAMILY NOT NAMED	coord: 843..1028 coord: 633..826 coord: 511..706
None	No IPR available	PANTHER	PTHR39308:SF3	SUBFAMILY NOT NAMED	coord: 511..706
None	No IPR available	PANTHER	PTHR39308	FAMILY NOT NAMED	coord: 128..312 coord: 423..612
None	No IPR available	PANTHER	PTHR39308	FAMILY NOT NAMED	coord: 970..1150
None	No IPR available	PANTHER	PTHR39308:SF3	SUBFAMILY NOT NAMED	coord: 423..612
None	No IPR available	PANTHER	PTHR39308:SF3	SUBFAMILY NOT NAMED	coord: 128..312 coord: 843..1028 coord: 633..826

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G010560.1	Lsi10G010560.1	mRNA