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Lsi10G008620 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCTATCTTGGTCGTCGGATGTGGATGACGGCGAGTGTAGCAGTAGTACAGGGGGCGCAATCGGACGGCCACCACGAGGCGAGCAAAGGAGTAATTTGTCTTCGCCAAAACCTTAGGGTTTCGACTGCGGAAACAACCGCCGTAGATGTCCGGCCAATTTCAAGTGCGAGGAATCACGAGGGAGAGAAGACGAGGAAAGCCGATGGGGAAGAGTCTATTCGACGAGTTATGTACTTGAACTGCTGGGGGCAGGGGTGA ATGAGCTATCTTGGTCGTCGGATGTGGATGACGGCGAGTGTAGCAGTAGTACAGGGGGCGCAATCGGACGGCCACCACGAGGCGAGCAAAGGAGTAATTTGTCTTCGCCAAAACCTTAGGGTTTCGACTGCGGAAACAACCGCCGTAGATGTCCGGCCAATTTCAAGTGCGAGGAATCACGAGGGAGAGAAGACGAGGAAAGCCGATGGGGAAGAGTCTATTCGACGAGTTATGTACTTGAACTGCTGGGGGCAGGGGTGA ATGAGCTATCTTGGTCGTCGGATGTGGATGACGGCGAGTGTAGCAGTAGTACAGGGGGCGCAATCGGACGGCCACCACGAGGCGAGCAAAGGAGTAATTTGTCTTCGCCAAAACCTTAGGGTTTCGACTGCGGAAACAACCGCCGTAGATGTCCGGCCAATTTCAAGTGCGAGGAATCACGAGGGAGAGAAGACGAGGAAAGCCGATGGGGAAGAGTCTATTCGACGAGTTATGTACTTGAACTGCTGGGGGCAGGGGTGA MSYLGRRMWMTASVAVVQGAQSDGHHEASKGVICLRQNLRVSTAETTAVDVRPISSARNHEGEKTRKADGEESIRRVMYLNCWGQG Homology
BLAST of Lsi10G008620 vs. ExPASy TrEMBL
Match: A0A5A7TY19 (Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G001960 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 7.9e-26 Identity = 68/90 (75.56%), Postives = 76/90 (84.44%), Query Frame = 0
BLAST of Lsi10G008620 vs. ExPASy TrEMBL
Match: A0A0A0KAY5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G123980 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 5.1e-17 Identity = 56/91 (61.54%), Postives = 61/91 (67.03%), Query Frame = 0
BLAST of Lsi10G008620 vs. ExPASy TrEMBL
Match: A0A5A7SLJ2 (Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003700 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.1e-08 Identity = 44/94 (46.81%), Postives = 55/94 (58.51%), Query Frame = 0
BLAST of Lsi10G008620 vs. ExPASy TrEMBL
Match: A0A0A0K6Z3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046690 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.1e-08 Identity = 44/94 (46.81%), Postives = 55/94 (58.51%), Query Frame = 0
BLAST of Lsi10G008620 vs. ExPASy TrEMBL
Match: A0A2J6L919 (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_3X40041 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 2.0e-08 Identity = 37/90 (41.11%), Postives = 53/90 (58.89%), Query Frame = 0
BLAST of Lsi10G008620 vs. NCBI nr
Match: KAA0047914.1 (wound-responsive family protein [Cucumis melo var. makuwa]) HSP 1 Score: 125.9 bits (315), Expect = 1.6e-25 Identity = 68/90 (75.56%), Postives = 76/90 (84.44%), Query Frame = 0
BLAST of Lsi10G008620 vs. NCBI nr
Match: KAE8646838.1 (hypothetical protein Csa_020898 [Cucumis sativus]) HSP 1 Score: 96.7 bits (239), Expect = 1.1e-16 Identity = 56/91 (61.54%), Postives = 61/91 (67.03%), Query Frame = 0
BLAST of Lsi10G008620 vs. NCBI nr
Match: KAE8646839.1 (hypothetical protein Csa_020660 [Cucumis sativus]) HSP 1 Score: 96.7 bits (239), Expect = 1.1e-16 Identity = 56/91 (61.54%), Postives = 61/91 (67.03%), Query Frame = 0
BLAST of Lsi10G008620 vs. NCBI nr
Match: KAG6604822.1 (Vesicle-associated protein 4-2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 87.4 bits (215), Expect = 6.4e-14 Identity = 48/89 (53.93%), Postives = 61/89 (68.54%), Query Frame = 0
BLAST of Lsi10G008620 vs. NCBI nr
Match: KAG7034937.1 (hypothetical protein SDJN02_01730, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 87.4 bits (215), Expect = 6.4e-14 Identity = 48/89 (53.93%), Postives = 61/89 (68.54%), Query Frame = 0
BLAST of Lsi10G008620 vs. TAIR 10
Match: AT4G28240.1 (Wound-responsive family protein ) HSP 1 Score: 51.2 bits (121), Expect = 4.8e-07 Identity = 34/93 (36.56%), Postives = 48/93 (51.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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