Lsi10G008490 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAGAAAGGTTGGTGCTAATTTCCAGGACCTGCTTCCATTAATGGCAGAGAAATTGGGAGGAGATGGGCTGATAAAGGAGCTGTGTAATGGGTTTGAAGTGCTGATGGACAAGGAGAAAGGGTTGATCACTTTGGAAAGCCTTAAGAGAAACTCTTGGCTGTTGGGTGTGCGAGACATGGGAAACGAGGAGCTTCTCAGCATGATGAAGGAGGGCGATTTAGATGGCGATGGTGCTTTGAATCAGATGGAATTTTGTGTCTTGATGTTTAGATTAAGCCCTGATTTGATGCAACACTCTTTGTATTGGCTTCAACATGCTTTGGAAAGCGAGTTTAATTAA ATGGCGAGAAAGGTTGGTGCTAATTTCCAGGACCTGCTTCCATTAATGGCAGAGAAATTGGGAGGAGATGGGCTGATAAAGGAGCTGTGTAATGGGTTTGAAGTGCTGATGGACAAGGAGAAAGGGTTGATCACTTTGGAAAGCCTTAAGAGAAACTCTTGGCTGTTGGGTGTGCGAGACATGGGAAACGAGGAGCTTCTCAGCATGATGAAGGAGGGCGATTTAGATGGCGATGGTGCTTTGAATCAGATGGAATTTTGTGTCTTGATGTTTAGATTAAGCCCTGATTTGATGCAACACTCTTTGTATTGGCTTCAACATGCTTTGGAAAGCGAGTTTAATTAA ATGGCGAGAAAGGTTGGTGCTAATTTCCAGGACCTGCTTCCATTAATGGCAGAGAAATTGGGAGGAGATGGGCTGATAAAGGAGCTGTGTAATGGGTTTGAAGTGCTGATGGACAAGGAGAAAGGGTTGATCACTTTGGAAAGCCTTAAGAGAAACTCTTGGCTGTTGGGTGTGCGAGACATGGGAAACGAGGAGCTTCTCAGCATGATGAAGGAGGGCGATTTAGATGGCGATGGTGCTTTGAATCAGATGGAATTTTGTGTCTTGATGTTTAGATTAAGCCCTGATTTGATGCAACACTCTTTGTATTGGCTTCAACATGCTTTGGAAAGCGAGTTTAATTAA MARKVGANFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQHALESEFN Homology
BLAST of Lsi10G008490 vs. ExPASy Swiss-Prot
Match: O81831 (Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 2.7e-31 Identity = 68/107 (63.55%), Postives = 84/107 (78.50%), Query Frame = 0
BLAST of Lsi10G008490 vs. ExPASy Swiss-Prot
Match: Q9LSQ6 (Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 1.2e-29 Identity = 64/106 (60.38%), Postives = 83/106 (78.30%), Query Frame = 0
BLAST of Lsi10G008490 vs. ExPASy Swiss-Prot
Match: Q9ZPX9 (Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2) HSP 1 Score: 125.6 bits (314), Expect = 3.7e-28 Identity = 58/109 (53.21%), Postives = 79/109 (72.48%), Query Frame = 0
BLAST of Lsi10G008490 vs. ExPASy Swiss-Prot
Match: Q2TBN3 (Centrin-2 OS=Bos taurus OX=9913 GN=CETN2 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.5e-08 Identity = 32/87 (36.78%), Postives = 51/87 (58.62%), Query Frame = 0
BLAST of Lsi10G008490 vs. ExPASy Swiss-Prot
Match: Q9R1K9 (Centrin-2 OS=Mus musculus OX=10090 GN=Cetn2 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.3e-08 Identity = 32/87 (36.78%), Postives = 51/87 (58.62%), Query Frame = 0
BLAST of Lsi10G008490 vs. ExPASy TrEMBL
Match: A0A0A0KCV2 (EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G120930 PE=4 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 5.5e-51 Identity = 101/113 (89.38%), Postives = 109/113 (96.46%), Query Frame = 0
BLAST of Lsi10G008490 vs. ExPASy TrEMBL
Match: A0A6J1JGE3 (calcium-binding protein PBP1-like OS=Cucurbita maxima OX=3661 GN=LOC111484150 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 6.1e-42 Identity = 86/108 (79.63%), Postives = 97/108 (89.81%), Query Frame = 0
BLAST of Lsi10G008490 vs. ExPASy TrEMBL
Match: A0A6J1FW37 (calcium-binding protein PBP1-like OS=Cucurbita moschata OX=3662 GN=LOC111449023 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 6.1e-42 Identity = 86/108 (79.63%), Postives = 97/108 (89.81%), Query Frame = 0
BLAST of Lsi10G008490 vs. ExPASy TrEMBL
Match: A0A6J1HZZ8 (calcium-binding protein PBP1-like OS=Cucurbita maxima OX=3661 GN=LOC111469641 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.5e-40 Identity = 88/113 (77.88%), Postives = 99/113 (87.61%), Query Frame = 0
BLAST of Lsi10G008490 vs. ExPASy TrEMBL
Match: A0A2P5AVV6 (Parvalbumin OS=Trema orientale OX=63057 GN=TorRG33x02_339920 PE=4 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 2.8e-39 Identity = 78/106 (73.58%), Postives = 99/106 (93.40%), Query Frame = 0
BLAST of Lsi10G008490 vs. NCBI nr
Match: XP_038902367.1 (calcium-binding protein KRP1-like [Benincasa hispida]) HSP 1 Score: 212.6 bits (540), Expect = 1.8e-51 Identity = 103/114 (90.35%), Postives = 109/114 (95.61%), Query Frame = 0
BLAST of Lsi10G008490 vs. NCBI nr
Match: XP_004140055.1 (calcium-binding protein KRP1 [Cucumis sativus] >KGN46674.1 hypothetical protein Csa_020739 [Cucumis sativus]) HSP 1 Score: 209.9 bits (533), Expect = 1.1e-50 Identity = 101/113 (89.38%), Postives = 109/113 (96.46%), Query Frame = 0
BLAST of Lsi10G008490 vs. NCBI nr
Match: KAG6570861.1 (Calcium-binding protein KRP1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 181.4 bits (459), Expect = 4.3e-42 Identity = 90/115 (78.26%), Postives = 101/115 (87.83%), Query Frame = 0
BLAST of Lsi10G008490 vs. NCBI nr
Match: XP_022944617.1 (calcium-binding protein PBP1-like [Cucurbita moschata] >KAG7010710.1 Calcium-binding protein PBP1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 179.9 bits (455), Expect = 1.3e-41 Identity = 86/108 (79.63%), Postives = 97/108 (89.81%), Query Frame = 0
BLAST of Lsi10G008490 vs. NCBI nr
Match: XP_022986403.1 (calcium-binding protein PBP1-like [Cucurbita maxima]) HSP 1 Score: 179.9 bits (455), Expect = 1.3e-41 Identity = 86/108 (79.63%), Postives = 97/108 (89.81%), Query Frame = 0
BLAST of Lsi10G008490 vs. TAIR 10
Match: AT4G27280.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 136.0 bits (341), Expect = 1.9e-32 Identity = 68/107 (63.55%), Postives = 84/107 (78.50%), Query Frame = 0
BLAST of Lsi10G008490 vs. TAIR 10
Match: AT5G54490.1 (pinoid-binding protein 1 ) HSP 1 Score: 130.6 bits (327), Expect = 8.2e-31 Identity = 64/106 (60.38%), Postives = 83/106 (78.30%), Query Frame = 0
BLAST of Lsi10G008490 vs. TAIR 10
Match: AT2G46600.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 125.6 bits (314), Expect = 2.6e-29 Identity = 58/109 (53.21%), Postives = 79/109 (72.48%), Query Frame = 0
BLAST of Lsi10G008490 vs. TAIR 10
Match: AT4G14640.1 (calmodulin 8 ) HSP 1 Score: 50.1 bits (118), Expect = 1.4e-06 Identity = 31/85 (36.47%), Postives = 45/85 (52.94%), Query Frame = 0
BLAST of Lsi10G008490 vs. TAIR 10
Match: AT1G66410.1 (calmodulin 4 ) HSP 1 Score: 47.8 bits (112), Expect = 7.0e-06 Identity = 28/83 (33.73%), Postives = 45/83 (54.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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