Lsi10G001730 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G001730
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Maternal effect embryo arrest 59, putative isoform 1
Location	chr10: 2784113 .. 2786865 (-)
RNA-Seq Expression	Lsi10G001730
Synteny	Lsi10G001730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTGGACGACCTCATGACATCTAAAATGAAAGCCCACTTTCAAACTTTCAACGCCCATGGTTTCCGGGTCGGTCTATCTCCCCTCTCTTCTATAGTATTTAAACCACCGCCACACCAAAATAAATCCCAGACCCGAACCATCACCATGGCGGCGCGGCGGTGCACGGCGATCAAGCCCAGCCGGAGCGACGTCGTGTTGGCCGAAGAGGAGCAGATGCGAATCACCGATCAGATCAGAGCCCAGTTCGATTCCATCGCCCCCAAGCGGCCGATCAAACCGAGCCGAAGCGAATCCGATTCCTTGACTCAAAACCCATCTGGAATCAACTCGGAAGAGACTATTCCCGAGCTCGATAAGCTCCGAAATCTGCAGTCACAATCTGATGTATTCGTCGATTTTTTTTTTTACATTTTTTTGTACTCGTGATCTGGGTTTGAACATTTGAGGAATCTTTATAGGTTTTACGCTTGGGAGTTGAAGATTCGTTGGTGCAGGAGGAGTATGTGGAGACAGAGTATTACAAGGAGTTGGGTTCGATTGAAAAACGCCATCATAAGGTTTCTCCTTTTCTTTCTTTTTCTTTAGGAACTTCTTTTTTGGGTGTTTAATGAGAATGATTGTTTGTTTTAAGTTTAAATTAGGTTGTATCTATAATCTTTGTGTCAAATGTTGATGAGGTTTAAAGGTTTAAAACAAAAAATGTTTCTCTAAACTACATTGTGCTGAATAATTTGGTAGATTTTAGAAAATGTCAGAATTAATGAACACAAAATTGAAAATCTATACAAACATATTAAAGTTTTTTAAATTTTATTGACTTAGTCGATACAAAAATTTAAAATATAAAGAGTTAAAGAATTTAACAGACAAATCCAAAAGTTTTATATATCTTCCAACAACCATTTGGTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTGCAAATTCTAGATGTTTTCTCACAAGTTTTTTTACGTTCTTACATAAACATATAAGGTGTGTGGAGAATACATTTTCAAGTGTTTAATTTAAAAAACAAGTCATGTTGAAAAAATTTAGAGTGTTTGGCAACCACTCAAAATAGTTTTTGAAGTGTATTTTAAATAGTTTTTGTCAAAAGAGTTTAAATAAAAAATAAATTTTTTGAAAAATATTTTATTCTCTAGTCAATCCAAACGGGCATTTAAGCTCTCACTCAAATTCTAAAAACAATTTTTTTTTTTTTTTTTTTTAAACTATGAACCTTTAGAAAAGAATTTTGTTTTTAGTTTTTAGTTTTTGAAATTCATGTTTTTTTTTTTCTTTCTAAATTCCATACTATAGTTCTCATATTTCTCAACTTAAATTTTTAGTCAAATTCCAAGAGAAAAGAAAAGAATTTGAATACTATTTTTAATTTTTAAAATTTCGCTTGTTTTTTTAAAAATATCAGACAAAGAAATTGATTTATGAAAGTAGTGTTTACTATTTATAAGCTTAATTTTCAAAAACAAAAAATCTTAGCCTAAATTTTTATTTTTTAGTTCTTAAAACTTAGCTGGTAAAAGGATTCAAATATTTGTAAGTGAAAGTAGTGTTTATATGGTCAAATGTTCCAAAACTATATAGTTATCAAATGAAACCTTAATGACAATATTTGTGAGTTAATCCTTTGTTATTATCATTGATTTTGGTGATGATTTTGGAGGGAGCAGATAGGGAGTGGGTTCATACAGGTAGGGAATGAAGGAGGAGAAAATGGAGTTCATATTCAGAATAATGAAACTGAGTTTATTGATGTTGCAAATGGGAGGGTTCATCTTCATGGTGGCTACAAAGGCAATCCTGCAACTAATGACTGGCTCCCTAAATTTGATGATCGTGATTTAATCTTCAGATCCCAAAAGCCCAGTCGAAGCGAAGGTTCCTTGTTCTAACCATGGAGAAATGAAACAATGTGGCTAGCGATTCTGTAAACTCTTGATATACAAAACGAGGATTTGAACTCGTTTTCGGACTTTGATGTTCGACGATAGTTTGTAGCCACAATCTGGCTGTATTGCTATCATGAACTGAATTAGCATTGGTAGTTCAATTTTAACTGGATTTCATATTGAAATCTACATTCAAACCAAAAAATTGGACTACTTTTAATGTTTGGTAAAGGTGTCTGTCTGTACGCTAATTTGCTTGTGAAAGTCATAATGAAAATAAAACTTCATTGGGTTTTTGGCGT

mRNA sequence

TTGTGGACGACCTCATGACATCTAAAATGAAAGCCCACTTTCAAACTTTCAACGCCCATGGTTTCCGGGTCGGTCTATCTCCCCTCTCTTCTATAGTATTTAAACCACCGCCACACCAAAATAAATCCCAGACCCGAACCATCACCATGGCGGCGCGGCGGTGCACGGCGATCAAGCCCAGCCGGAGCGACGTCGTGTTGGCCGAAGAGGAGCAGATGCGAATCACCGATCAGATCAGAGCCCAGTTCGATTCCATCGCCCCCAAGCGGCCGATCAAACCGAGCCGAAGCGAATCCGATTCCTTGACTCAAAACCCATCTGGAATCAACTCGGAAGAGACTATTCCCGAGCTCGATAAGCTCCGAAATCTGCAGTCACAATCTGATGTTTTACGCTTGGGAGTTGAAGATTCGTTGGTGCAGGAGGAGTATGTGGAGACAGAGTATTACAAGGAGTTGGGTTCGATTGAAAAACGCCATCATAAGATAGGGAGTGGGTTCATACAGGTAGGGAATGAAGGAGGAGAAAATGGAGTTCATATTCAGAATAATGAAACTGAGTTTATTGATGTTGCAAATGGGAGGGTTCATCTTCATGGTGGCTACAAAGGCAATCCTGCAACTAATGACTGGCTCCCTAAATTTGATGATCGTGATTTAATCTTCAGATCCCAAAAGCCCAGTCGAAGCGAAGGTTCCTTGTTCTAACCATGGAGAAATGAAACAATGTGGCTAGCGATTCTGTAAACTCTTGATATACAAAACGAGGATTTGAACTCGTTTTCGGACTTTGATGTTCGACGATAGTTTGTAGCCACAATCTGGCTGTATTGCTATCATGAACTGAATTAGCATTGGTAGTTCAATTTTAACTGGATTTCATATTGAAATCTACATTCAAACCAAAAAATTGGACTACTTTTAATGTTTGGTAAAGGTGTCTGTCTGTACGCTAATTTGCTTGTGAAAGTCATAATGAAAATAAAACTTCATTGGGTTTTTGGCGT

Coding sequence (CDS)

ATGACATCTAAAATGAAAGCCCACTTTCAAACTTTCAACGCCCATGGTTTCCGGGTCGGTCTATCTCCCCTCTCTTCTATAGTATTTAAACCACCGCCACACCAAAATAAATCCCAGACCCGAACCATCACCATGGCGGCGCGGCGGTGCACGGCGATCAAGCCCAGCCGGAGCGACGTCGTGTTGGCCGAAGAGGAGCAGATGCGAATCACCGATCAGATCAGAGCCCAGTTCGATTCCATCGCCCCCAAGCGGCCGATCAAACCGAGCCGAAGCGAATCCGATTCCTTGACTCAAAACCCATCTGGAATCAACTCGGAAGAGACTATTCCCGAGCTCGATAAGCTCCGAAATCTGCAGTCACAATCTGATGTTTTACGCTTGGGAGTTGAAGATTCGTTGGTGCAGGAGGAGTATGTGGAGACAGAGTATTACAAGGAGTTGGGTTCGATTGAAAAACGCCATCATAAGATAGGGAGTGGGTTCATACAGGTAGGGAATGAAGGAGGAGAAAATGGAGTTCATATTCAGAATAATGAAACTGAGTTTATTGATGTTGCAAATGGGAGGGTTCATCTTCATGGTGGCTACAAAGGCAATCCTGCAACTAATGACTGGCTCCCTAAATTTGATGATCGTGATTTAATCTTCAGATCCCAAAAGCCCAGTCGAAGCGAAGGTTCCTTGTTCTAA

Protein sequence

MTSKMKAHFQTFNAHGFRVGLSPLSSIVFKPPPHQNKSQTRTITMAARRCTAIKPSRSDVVLAEEEQMRITDQIRAQFDSIAPKRPIKPSRSESDSLTQNPSGINSEETIPELDKLRNLQSQSDVLRLGVEDSLVQEEYVETEYYKELGSIEKRHHKIGSGFIQVGNEGGENGVHIQNNETEFIDVANGRVHLHGGYKGNPATNDWLPKFDDRDLIFRSQKPSRSEGSLF

Homology

[Close]

BLAST of Lsi10G001730 vs. ExPASy TrEMBL
Match: A0A5A7SQ48 (Maternal effect embryo arrest 59, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold465G00100 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 6.7e-80
Identity = 157/185 (84.86%), Postives = 164/185 (88.65%), Query Frame = 0


Query: 45  MAARRCTAIKPSRSDVVLAEEEQMRITDQIRAQFDSIAPKRPIKPSRSESDSLTQNPSGI 104
           MAA RCTA KPSRSD+VL  EEQMRITDQIRAQFDSIAPKRP+KPSRSESDSLT+NPSG 
Sbjct: 1   MAAPRCTATKPSRSDIVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESDSLTENPSGF 60

Query: 105 NSEETIPELDKLRNLQSQSDVLRLGVEDSLVQEEYVETEYYKELGSIEKRHHKIGSGFIQ 164
            SE+ IPELDK RNLQSQS  LRLG  D LVQE+Y+ETEYYKEL SIEKRHHK GSGFIQ
Sbjct: 61  TSEKAIPELDKFRNLQSQSHALRLGDGDCLVQEDYLETEYYKELDSIEKRHHKTGSGFIQ 120

Query: 165 VGNEGGENGVHIQNNETEFI-DVANGRVHLHGGYKGNPATNDWLPKFDDRDLIFRSQKPS 224
           VGNEGGENGVH QN   EFI DVANGRVH HGGYKGNPATNDWLPKFDDRDLIFRSQKP+
Sbjct: 121 VGNEGGENGVHNQNKPHEFINDVANGRVHHHGGYKGNPATNDWLPKFDDRDLIFRSQKPN 180

Query: 225 RSEGS 229
           RSEGS
Sbjct: 181 RSEGS 185

[Close]

BLAST of Lsi10G001730 vs. ExPASy TrEMBL
Match: A0A1S3C2G8 (uncharacterized protein LOC103495913 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495913 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 6.7e-80
Identity = 157/185 (84.86%), Postives = 164/185 (88.65%), Query Frame = 0


Query: 45  MAARRCTAIKPSRSDVVLAEEEQMRITDQIRAQFDSIAPKRPIKPSRSESDSLTQNPSGI 104
           MAA RCTA KPSRSD+VL  EEQMRITDQIRAQFDSIAPKRP+KPSRSESDSLT+NPSG 
Sbjct: 1   MAAPRCTATKPSRSDIVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESDSLTENPSGF 60

Query: 105 NSEETIPELDKLRNLQSQSDVLRLGVEDSLVQEEYVETEYYKELGSIEKRHHKIGSGFIQ 164
            SE+ IPELDK RNLQSQS  LRLG  D LVQE+Y+ETEYYKEL SIEKRHHK GSGFIQ
Sbjct: 61  TSEKAIPELDKFRNLQSQSHALRLGDGDCLVQEDYLETEYYKELDSIEKRHHKTGSGFIQ 120

Query: 165 VGNEGGENGVHIQNNETEFI-DVANGRVHLHGGYKGNPATNDWLPKFDDRDLIFRSQKPS 224
           VGNEGGENGVH QN   EFI DVANGRVH HGGYKGNPATNDWLPKFDDRDLIFRSQKP+
Sbjct: 121 VGNEGGENGVHNQNKPHEFINDVANGRVHHHGGYKGNPATNDWLPKFDDRDLIFRSQKPN 180

Query: 225 RSEGS 229
           RSEGS
Sbjct: 181 RSEGS 185

[Close]

BLAST of Lsi10G001730 vs. ExPASy TrEMBL
Match: A0A0A0LN14 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G425770 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.4e-77
Identity = 154/185 (83.24%), Postives = 160/185 (86.49%), Query Frame = 0


Query: 45  MAARRCTAIKPSRSDVVLAEEEQMRITDQIRAQFDSIAPKRPIKPSRSESDSLTQNPSGI 104
           MAA RCTA KPSRSDVVL  EEQMRITD IRAQFDSIAPKRP+KPSRSESD LTQ PSG 
Sbjct: 1   MAAPRCTATKPSRSDVVLDNEEQMRITDHIRAQFDSIAPKRPMKPSRSESDPLTQYPSGF 60

Query: 105 NSEETIPELDKLRNLQSQSDVLRLGVEDSLVQEEYVETEYYKELGSIEKRHHKIGSGFIQ 164
            S++ IPELDKLRNLQS+S   RLGV D LVQE+YVETEYYKEL SIEKRHHK GSGFIQ
Sbjct: 61  TSKKAIPELDKLRNLQSKSHAFRLGVGDCLVQEDYVETEYYKELDSIEKRHHKTGSGFIQ 120

Query: 165 VGNEGGENGVHIQNNETEFI-DVANGRVHLHGGYKGNPATNDWLPKFDDRDLIFRSQKPS 224
           VGNEGGENGVH Q    EFI DVANGRVHLHGGYKGNPATNDWLPKFDDR  IFRSQKP+
Sbjct: 121 VGNEGGENGVHNQKKTQEFINDVANGRVHLHGGYKGNPATNDWLPKFDDRSSIFRSQKPN 180

Query: 225 RSEGS 229
           RSEGS
Sbjct: 181 RSEGS 185

[Close]

BLAST of Lsi10G001730 vs. ExPASy TrEMBL
Match: A0A5D3BJ21 (Maternal effect embryo arrest 59, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00990 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.5e-74
Identity = 151/185 (81.62%), Postives = 158/185 (85.41%), Query Frame = 0


Query: 45  MAARRCTAIKPSRSDVVLAEEEQMRITDQIRAQFDSIAPKRPIKPSRSESDSLTQNPSGI 104
           MAA RCTA KPSRSD+VL  EEQMRITDQIRAQFDSIAPKRP+KPSRSESDSLT+NPSG 
Sbjct: 1   MAAPRCTATKPSRSDIVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESDSLTENPSGF 60

Query: 105 NSEETIPELDKLRNLQSQSDVLRLGVEDSLVQEEYVETEYYKELGSIEKRHHKIGSGFIQ 164
            SE+ IPELDK RNLQSQS  LRLG  D LVQE+Y+ETEYYKEL SIEKRHHK       
Sbjct: 61  TSEKAIPELDKFRNLQSQSHALRLGDGDCLVQEDYLETEYYKELDSIEKRHHK------- 120

Query: 165 VGNEGGENGVHIQNNETEFI-DVANGRVHLHGGYKGNPATNDWLPKFDDRDLIFRSQKPS 224
           VGNEGGENGVH QN   EFI DVANGRVH HGGYKGNPATNDWLPKFDDRDLIFRSQKP+
Sbjct: 121 VGNEGGENGVHNQNKPHEFINDVANGRVHHHGGYKGNPATNDWLPKFDDRDLIFRSQKPN 178

Query: 225 RSEGS 229
           RSEGS
Sbjct: 181 RSEGS 178

[Close]

BLAST of Lsi10G001730 vs. ExPASy TrEMBL
Match: A0A6J1FXM8 (uncharacterized protein LOC111448608 OS=Cucurbita moschata OX=3662 GN=LOC111448608 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 3.9e-72
Identity = 151/186 (81.18%), Postives = 157/186 (84.41%), Query Frame = 0


Query: 45  MAARRCTAIKPSRSDVVLAEEEQMRITDQIRAQFDSIAPKRPIKPSR--SESDSLTQNPS 104
           MAARRCTA KPSRSDVVL  EEQMRITDQIRAQFDSIAPKRP+KPSR  SESDS TQ+PS
Sbjct: 1   MAARRCTARKPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQDPS 60

Query: 105 GINSEETIPELDKLRNLQSQSDVLRLGVEDSLVQEEYVETEYYKELGSIEKRHHKIGSGF 164
           G  +EE IPELDKLRNLQ+QS VL LGV DSLVQEEYVETEYYKEL SIEKRHHK GSGF
Sbjct: 61  GSTAEEAIPELDKLRNLQTQSHVLALGVGDSLVQEEYVETEYYKELDSIEKRHHKTGSGF 120

Query: 165 IQVGNEGGENGVHIQNNETEFIDVA-NGRVHLHGGYKGNPATNDWLPKFDDRDLIFRSQK 224
           IQVG EGG N VH     T  ID A  GRVHLHGGYKGNPATNDW P FDDRDLIF+SQK
Sbjct: 121 IQVGKEGGGNVVH-----TRLIDAATGGRVHLHGGYKGNPATNDWFPTFDDRDLIFKSQK 180

Query: 225 PSRSEG 228
           P+RSEG
Sbjct: 181 PNRSEG 181

[Close]

BLAST of Lsi10G001730 vs. NCBI nr
Match: XP_038901917.1 (uncharacterized protein LOC120088588 [Benincasa hispida])

HSP 1 Score: 368.6 bits (945), Expect = 3.9e-98
Identity = 190/232 (81.90%), Postives = 201/232 (86.64%), Query Frame = 0


Query: 5   MKAH--------FQTFNAHGFRVGLSPLSSIVFKPPPHQNKSQTRTITMAARRCTAIKPS 64
           MKAH         + F+AHGF VGL P  +IVFKPPPHQ KSQT+TITMAARR TA KPS
Sbjct: 1   MKAHQNVTSLFKSKDFDAHGFPVGLCP-HNIVFKPPPHQKKSQTKTITMAARRSTASKPS 60

Query: 65  RSDVVLAEEEQMRITDQIRAQFDSIAPKRPIKPSRSESDSLTQNPSGINSEETIPELDKL 124
           RSDVVL +EEQMRITDQIRAQFDS APKRP+KPSRSESDS  QNPSGINS E IPELDKL
Sbjct: 61  RSDVVLCDEEQMRITDQIRAQFDSTAPKRPMKPSRSESDSSPQNPSGINSVEAIPELDKL 120

Query: 125 RNLQSQSDVLRLGVEDSLVQEEYVETEYYKELGSIEKRHHKIGSGFIQVGNEGGENGVHI 184
           RNLQSQS VLRLGV DSLVQE+YVETEYYKEL SIEKRHHK GSGFIQVGNEGG+NGVH+
Sbjct: 121 RNLQSQSHVLRLGVGDSLVQEDYVETEYYKELNSIEKRHHKTGSGFIQVGNEGGQNGVHV 180

Query: 185 QNNETEFIDVANGRVHLHGGYKGNPATNDWLPKFDDRDLIFRSQKPSRSEGS 229
            N ETEFIDVANGRVHLHGGYKGNPATNDWLP FDD DLIFRS+KP+RSEGS
Sbjct: 181 NNTETEFIDVANGRVHLHGGYKGNPATNDWLPNFDDHDLIFRSRKPNRSEGS 231

[Close]

BLAST of Lsi10G001730 vs. NCBI nr
Match: XP_008455813.1 (PREDICTED: uncharacterized protein LOC103495913 isoform X1 [Cucumis melo] >KAA0032503.1 Maternal effect embryo arrest 59, putative isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 307.0 bits (785), Expect = 1.4e-79
Identity = 157/185 (84.86%), Postives = 164/185 (88.65%), Query Frame = 0


Query: 45  MAARRCTAIKPSRSDVVLAEEEQMRITDQIRAQFDSIAPKRPIKPSRSESDSLTQNPSGI 104
           MAA RCTA KPSRSD+VL  EEQMRITDQIRAQFDSIAPKRP+KPSRSESDSLT+NPSG 
Sbjct: 1   MAAPRCTATKPSRSDIVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESDSLTENPSGF 60

Query: 105 NSEETIPELDKLRNLQSQSDVLRLGVEDSLVQEEYVETEYYKELGSIEKRHHKIGSGFIQ 164
            SE+ IPELDK RNLQSQS  LRLG  D LVQE+Y+ETEYYKEL SIEKRHHK GSGFIQ
Sbjct: 61  TSEKAIPELDKFRNLQSQSHALRLGDGDCLVQEDYLETEYYKELDSIEKRHHKTGSGFIQ 120

Query: 165 VGNEGGENGVHIQNNETEFI-DVANGRVHLHGGYKGNPATNDWLPKFDDRDLIFRSQKPS 224
           VGNEGGENGVH QN   EFI DVANGRVH HGGYKGNPATNDWLPKFDDRDLIFRSQKP+
Sbjct: 121 VGNEGGENGVHNQNKPHEFINDVANGRVHHHGGYKGNPATNDWLPKFDDRDLIFRSQKPN 180

Query: 225 RSEGS 229
           RSEGS
Sbjct: 181 RSEGS 185

[Close]

BLAST of Lsi10G001730 vs. NCBI nr
Match: XP_004151867.1 (uncharacterized protein LOC101210723 isoform X1 [Cucumis sativus] >KGN63300.1 hypothetical protein Csa_022499 [Cucumis sativus])

HSP 1 Score: 298.5 bits (763), Expect = 4.9e-77
Identity = 154/185 (83.24%), Postives = 160/185 (86.49%), Query Frame = 0


Query: 45  MAARRCTAIKPSRSDVVLAEEEQMRITDQIRAQFDSIAPKRPIKPSRSESDSLTQNPSGI 104
           MAA RCTA KPSRSDVVL  EEQMRITD IRAQFDSIAPKRP+KPSRSESD LTQ PSG 
Sbjct: 1   MAAPRCTATKPSRSDVVLDNEEQMRITDHIRAQFDSIAPKRPMKPSRSESDPLTQYPSGF 60

Query: 105 NSEETIPELDKLRNLQSQSDVLRLGVEDSLVQEEYVETEYYKELGSIEKRHHKIGSGFIQ 164
            S++ IPELDKLRNLQS+S   RLGV D LVQE+YVETEYYKEL SIEKRHHK GSGFIQ
Sbjct: 61  TSKKAIPELDKLRNLQSKSHAFRLGVGDCLVQEDYVETEYYKELDSIEKRHHKTGSGFIQ 120

Query: 165 VGNEGGENGVHIQNNETEFI-DVANGRVHLHGGYKGNPATNDWLPKFDDRDLIFRSQKPS 224
           VGNEGGENGVH Q    EFI DVANGRVHLHGGYKGNPATNDWLPKFDDR  IFRSQKP+
Sbjct: 121 VGNEGGENGVHNQKKTQEFINDVANGRVHLHGGYKGNPATNDWLPKFDDRSSIFRSQKPN 180

Query: 225 RSEGS 229
           RSEGS
Sbjct: 181 RSEGS 185

[Close]

BLAST of Lsi10G001730 vs. NCBI nr
Match: TYJ98365.1 (Maternal effect embryo arrest 59, putative isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 288.5 bits (737), Expect = 5.1e-74
Identity = 151/185 (81.62%), Postives = 158/185 (85.41%), Query Frame = 0


Query: 45  MAARRCTAIKPSRSDVVLAEEEQMRITDQIRAQFDSIAPKRPIKPSRSESDSLTQNPSGI 104
           MAA RCTA KPSRSD+VL  EEQMRITDQIRAQFDSIAPKRP+KPSRSESDSLT+NPSG 
Sbjct: 1   MAAPRCTATKPSRSDIVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESDSLTENPSGF 60

Query: 105 NSEETIPELDKLRNLQSQSDVLRLGVEDSLVQEEYVETEYYKELGSIEKRHHKIGSGFIQ 164
            SE+ IPELDK RNLQSQS  LRLG  D LVQE+Y+ETEYYKEL SIEKRHHK       
Sbjct: 61  TSEKAIPELDKFRNLQSQSHALRLGDGDCLVQEDYLETEYYKELDSIEKRHHK------- 120

Query: 165 VGNEGGENGVHIQNNETEFI-DVANGRVHLHGGYKGNPATNDWLPKFDDRDLIFRSQKPS 224
           VGNEGGENGVH QN   EFI DVANGRVH HGGYKGNPATNDWLPKFDDRDLIFRSQKP+
Sbjct: 121 VGNEGGENGVHNQNKPHEFINDVANGRVHHHGGYKGNPATNDWLPKFDDRDLIFRSQKPN 178

Query: 225 RSEGS 229
           RSEGS
Sbjct: 181 RSEGS 178

[Close]

BLAST of Lsi10G001730 vs. NCBI nr
Match: XP_023512644.1 (uncharacterized protein LOC111777334 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 288.1 bits (736), Expect = 6.6e-74
Identity = 154/186 (82.80%), Postives = 160/186 (86.02%), Query Frame = 0


Query: 45  MAARRCTAIKPSRSDVVLAEEEQMRITDQIRAQFDSIAPKRPIKPSR--SESDSLTQNPS 104
           MAARRCTA KPSRSDVVL  EEQMRITDQIRAQFDSIAPKRP+KPSR  SESDS TQNPS
Sbjct: 1   MAARRCTASKPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQNPS 60

Query: 105 GINSEETIPELDKLRNLQSQSDVLRLGVEDSLVQEEYVETEYYKELGSIEKRHHKIGSGF 164
           G  +EE IPELDKLRNLQ+QS VL LGV DSLVQEEYVETEYYKEL SIEKRHHK GSGF
Sbjct: 61  GSTAEEAIPELDKLRNLQTQSHVLALGVGDSLVQEEYVETEYYKELDSIEKRHHKTGSGF 120

Query: 165 IQVGNEGGENGVHIQNNETEFIDVA-NGRVHLHGGYKGNPATNDWLPKFDDRDLIFRSQK 224
           IQVG EGG N VH     T+FID A  GRVHLHGGYKGNPATNDWLP FDDRDLIF+SQK
Sbjct: 121 IQVGKEGGGNVVH-----TQFIDAATGGRVHLHGGYKGNPATNDWLPTFDDRDLIFKSQK 180

Query: 225 PSRSEG 228
           P+RSEG
Sbjct: 181 PNRSEG 181

[Close]

BLAST of Lsi10G001730 vs. TAIR 10
Match: AT4G37300.1 (maternal effect embryo arrest 59 )

HSP 1 Score: 121.7 bits (304), Expect = 7.7e-28
Identity = 80/183 (43.72%), Postives = 110/183 (60.11%), Query Frame = 0


Query: 51  TAIKPSRSDVVLAEEEQMRITDQIRAQFDSIAPKRPIKPSRSESDSLTQNPSGINSEETI 110
           + +KPSRSD +   E+Q++  +QIRA FDS+APKRP KP+RSE       P   ++ + I
Sbjct: 2   STMKPSRSDEISDPEQQIKNANQIRADFDSLAPKRPTKPTRSEPGF----PGSFSASDKI 61

Query: 111 ---PELDKLRNLQSQSDVLRLGVED-SLVQEEYVETEYYKELGSIEKRHHKIGSGFIQVG 170
              PE DK ++LQSQ+    LG  D S VQ+E++ETEYY  L +I+K+HH  GSGFI V 
Sbjct: 62  TDHPEADKFQSLQSQTHGKVLGEGDSSAVQDEFLETEYYSNLTAIDKQHHTTGSGFINVV 121

Query: 171 NEGGENGVHIQNNETEFIDVAN-GRVHLHGGYKGNPATNDWLPKFDDRDLIFRSQKPSRS 229
            E  +NG      E+E +  A  G       Y+ NPATN+W+P  ++      S KP+RS
Sbjct: 122 KE--DNG-----EESEAVTAAAIGDGGEKAVYRSNPATNEWIPATEEDFDSESSSKPNRS 173

The following BLAST results are available for this feature:

BLAST of Lsi10G001730 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi10G001730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SQ48	6.7e-80	84.86	Maternal effect embryo arrest 59, putative isoform 1 OS=Cucumis melo var. makuwa...	[more]
A0A1S3C2G8	6.7e-80	84.86	uncharacterized protein LOC103495913 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LN14	2.4e-77	83.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G425770 PE=4 SV=1	[more]
A0A5D3BJ21	2.5e-74	81.62	Maternal effect embryo arrest 59, putative isoform 1 OS=Cucumis melo var. makuwa...	[more]
A0A6J1FXM8	3.9e-72	81.18	uncharacterized protein LOC111448608 OS=Cucurbita moschata OX=3662 GN=LOC1114486...	[more]

BLAST of Lsi10G001730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901917.1	3.9e-98	81.90	uncharacterized protein LOC120088588 [Benincasa hispida]	[more]
XP_008455813.1	1.4e-79	84.86	PREDICTED: uncharacterized protein LOC103495913 isoform X1 [Cucumis melo] >KAA00...	[more]
XP_004151867.1	4.9e-77	83.24	uncharacterized protein LOC101210723 isoform X1 [Cucumis sativus] >KGN63300.1 hy...	[more]
TYJ98365.1	5.1e-74	81.62	Maternal effect embryo arrest 59, putative isoform 1 [Cucumis melo var. makuwa]	[more]
XP_023512644.1	6.6e-74	82.80	uncharacterized protein LOC111777334 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi10G001730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37300.1	7.7e-28	43.72	maternal effect embryo arrest 59	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..107
None	No IPR available	PANTHER	PTHR34686:SF1	MATERNAL EFFECT EMBRYO ARREST PROTEIN	coord: 48..227
None	No IPR available	PANTHER	PTHR34686	MATERNAL EFFECT EMBRYO ARREST PROTEIN	coord: 48..227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G001730.1	Lsi10G001730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy