Lsi10G001330 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTAAGCTCCACCTAGTTTAAATATGCTCTTTTTTCTCTCTCCTAAGCATTTTACCTTTTTGCTCTCTGCTTACGTGGAAGTTTGTGCCGTTAGATTGTTGGTACGACTCATTCTAAAAGAAGAAGAAGAGGGAAAAAGAGAGAGAGAAAAAAATCATGAACAAATTTCTAGATTCAATTTCTCTAATTCTGCGCGTCTTGTTTGTCCCTTTCTCCCAAATCCCTAATGGCCGTCTGGTTCGTCTTTGCCCAAGATTATGGAAGATTTAGGTGGGTACGTTTTTCCTTTTCAGAATTAATTTGAATTTTCTTCGTAGGTTTTCTTTTCCTGAAGAAGTCGTTTTCTTAGATTTCTTTTTTATTAAAGAACTGTTCCACTTTTTGACTTTGAAAACAAGTGGGCAAATACTTTTGGTTCACGTTCATCCAATCCATGCTTCACATACAACAGAACAAAGAAGCCAGAATCTGCCATTTGCTTCTAATTTGAAGCTCTCAACACGAAGGTCTCTCTCTCTCTCTCTCTTTCTTGCTTTTTATTCCGTTTTTTCTTTTGCTCATTTTGGCATTTGGGGAAATTTCAGTTTAGGGTAGTTTTCTGCAATAGAATTCTTCAGGAACATGGAAAATGCTTCTTCTTATTTCTAGTTTTGCAGTTTTCAATATTAACATAATGATCATTTGATGATAAGAATGTTGCTTGTGGCTGATTATGTATATTTTCTAGTTTAAATTCTAAACTCTCAAGTCTCTATCTAATTCTCACGGATCTCAATTGTGTATGTACTTTAAGAAGTTTTTTAATAGGTTCTAAACCTTTAATCTTGTGTCCAATGATTACACCACTAAAGGGTTCAACCCACCTTAATGATGCATATTAGTTGAAAGTTTTTAAGGACTTGGTAAAAACCTTTTATACTGGAACTAAATAAACAAAAGTTTGAAGATCCTTGTTCTTATTCTCAGGGATGTACCTAAGAATTGTAGGCGTCATTTTAATTGGATTGTCAGCATGGGCATTTTCAGCCATTCGCCCTCCACCTCCTAAAATCTGTGGTTCTGTTGGTGGTCCGCCAATAACTGCTCCAAGAATAAAACTTAGAGATGGAAGGCATTTGGCTTATAAGGAGCATGGTGTTCCCAGAACAGTAGCCAAGTACAAGATCATATATATTCATGGCTTTTCTAATAGCAGACATGATGCAGCAGTTGCAGTTTTTCCTTCTCCAGTATCCAGCTTCTACTCTCAACCTGGATTTAGTACTTTTTCCTCAATGTTTTTGCAACTCAAGTAAGACGGTTAATTTCCTTCTTTGGTGATTTACTTTCAGGGCTTCCTTGAGGAACTCGGAGTCTATGTCGTCTCTTTTGATAGACCTGGATATGGAGAAAGTGACCCGCATCCAAAGCGAACAGTAAAGAGTTTGGCATTAGATGTTGAAGAACTTGGTGATCAGCTAGGACTGGGTCCTAAGTTTTATGTAATTGGCTTGTCAATGGGTGGCCAAGCAGTTTGGGGTTGTCTCAAGTATATCCCTCATAGGTATCACTGAACTACACATTTTTGCTCATTAATATGGTAAAATCTAGAATTCATCCATATTCGCCTCTTGGGCAAGTACAGCCTATTGATTGCATTACATATAAAATGATTGTAAGAAGCATTTTATAGTTGATCAATTGTATTATTTGAACTCAATTCATAACCATAATATCTTCTCACTGCAAGAAGTTGATTGCATTACATACATTCATACATTTATACATATAACAAATGCATGCAGGCGCTTGCAAATGAGGAACTCATTCAAGAACGTCACCACAGCTATTACTAATTATTGATAATGTTGTAGTCATCACTATAGCTATTGGATGGGATATTTTTTCTGCACTCTGCTATAAAAGAATCAATTTTGGATGTTGCAGATTGGCAGGAGCTTCTCTACTTGCTCCAGTTATCAACTATTGGTGGCCTAGTTTTCCTGCAAACTTATCTAAGGAAGGTTTTTCCAGCCAACTACCACAGGATCAGTGGACACAAAGTGTTGCTCATCATCTTCCATGGCTAACTTATTGGTGGAACACTCAGAAACTCTTTCCTGTTTTGAGTATTTTAGCCGGTAGGCATGAGATCTTTTCCAGTCAAGATATTGAAATATTGCGCTCTCTTGAAAGGAGGCCAGTGGATCAGGTAATAAGTCTCTTTCCTCTTGTTGACTTTTTGTTGATTTCTCAGTGCCTCTTTTACAATTTTTTAGAGGATTAGACTCCTAAAGGAGAAAAGAAAGAAAGTCAAAACAAAGAAGTAGGAGGAAAACACCTTTATTATGTGAAGAAAAAGGATGCAAAAGAGAGGACAAGGAGCCCTCAAGAAAGTCTAAGTTTACAAAGAAAGTACTGTAGTTGGCAAAAATTACATTGATGGGGTTCATTTTGGCTGAATCTTCAGCAAGGAAGGAGAGGGGCACTCTCGAATACACCATGGCTGGTTCCTTTGTTCTTATTTTCGTGTTTTGCTTTCTGCCTTTGATATCATGACTTGTTTAGTTCTTTCCATTGTAAATGTTGAGAACTCTCAATATATCCAAGTATCAGGGGTCTAGTTGCCCTGTTGTTTATTTCTTGCTTGTTGGGATCTTCCGACTGCAGGGGAAATTCTTAAGATACCTAACACAAGCATCATCAAACACTTCAATTTCCTGAGCAAGCCCTTCCATTTCTATTAAAAACCACACTTTCCACAATAGGGCCTTCACTCTGTATTGCAACTTAAAGATTTTCCTTTTCCCTTTAATGCACAGTATCCCATGTTTCCATGGAATACTAAGGATGTGGTTCCACAACGTGGTCAATTTTTCCTATTGGGGGTGTTTAGATGTTTGGGTGGGCATCACCGTGACTGAATGAGGAATTTTATCTTTTTTGGATTTTTTGCTGCCTCAAACACTAGTTCTCTCCGTGTTCCCGGATGCCGGAAGTTTCTTTCACAGATTTTAAGAATCTTACTCTAGAGAGGAAGAAACATTAACAGAAATGACAGATAAGATAGGCCAACCTGAACTTAACTCAATTGGTTTATGCATATATCCTTGATAAAGAGATCATAGGTTCGAATCCACCAACCCAAATGTTGAACTAAAAAAAGGGTGATGGATGAGATGGTAGATAGGATGGTTAATTTTTGTCGTTAATGTTTCTAAACAATTTGGTCCTCCTTATTACAAGACAATCTTTTTGTACTAGCAACTTTCTGAATCCCTAGACGAGTCTTCTTTAAGACAAACGATACAACTAGGAGCATGTTTGGATTGACTTTTTAAGTGCTTTAAAGTCACTTTCTTTGCCCTGTTGCTTTCATGTCAACATTCCATCTCCTCTGTTGCTTTTATGACTTGTAATTTGTTCTCAGGATCAGAACATTCTATACCCTTTCAATTGGCCAGTTTTGACTCTTCCCTTGAAATTATGCTTCCTCATGACTTAGTTTCCCGCTCAATCAACAGGGACAAACAATCATTGAAATATAATTGTCTTCTTTAAGGCTTTGATTTCATTGTGTATAATTAAAATTTATAGTTAGATTTATAATTTCTTCCTGAACAAACTGCATCTCTTTTTCTTTTTTTCTTTTTTTTTTTTTTGGGTGTCTTTTGGTGCAGGAATATGTGAAACAACAAGGAGATTTTGAATCCTTCCACCGTGATCTGATGATTGGATTTGGGAAATGGGAATTCGATCCAATGCTTCTTGAAAACATATTTCCTAAGAATGAAGGATCCGTCCATCTATGGCAAGGCGACGAGGACAAACTCGTGCCTGTTAAGCTACAACGTTATATTGCTCAAAAACTTCCTTGGATTCGTTACCGTGAGTTACCTGGTGCAGGCCATTTGTTTGTTTTCACAAGGAAAATGAGTGAAGAAATTCTGAGGTCATTGCTTGTTCAATGAAATGAAGCCATTGCTTGTCCAATGGAATGAAGGCGTTCTTTTAATTGTAGTTTCGTATTTTCTTTCAGCTACATTTCTTTTGGGTTATACGTAAACTTCAGAGTATGCTTTTATGCTTCTTTTTTTTCCACACGTATGTTCGAATGGATAAATAAAGCAATTTTTTTTTT ATTTAAGCTCCACCTAGTTTAAATATGCTCTTTTTTCTCTCTCCTAAGCATTTTACCTTTTTGCTCTCTGCTTACGTGGAAGTTTGTGCCGTTAGATTGTTGGTACGACTCATTCTAAAAGAAGAAGAAGAGGGAAAAAGAGAGAGAGAAAAAAATCATGAACAAATTTCTAGATTCAATTTCTCTAATTCTGCGCGTCTTGTTTGTCCCTTTCTCCCAAATCCCTAATGGCCGTCTGGTTCGTCTTTGCCCAAGATTATGGAAGATTTAGTGGGCAAATACTTTTGGTTCACGTTCATCCAATCCATGCTTCACATACAACAGAACAAAGAAGCCAGAATCTGCCATTTGCTTCTAATTTGAAGCTCTCAACACGAAGGGATGTACCTAAGAATTGTAGGCGTCATTTTAATTGGATTGTCAGCATGGGCATTTTCAGCCATTCGCCCTCCACCTCCTAAAATCTGTGGTTCTGTTGGTGGTCCGCCAATAACTGCTCCAAGAATAAAACTTAGAGATGGAAGGCATTTGGCTTATAAGGAGCATGGTGTTCCCAGAACAGTAGCCAAGTACAAGATCATATATATTCATGGCTTTTCTAATAGCAGACATGATGCAGCAGTTGCAGTTTTTCCTTCTCCAGGCTTCCTTGAGGAACTCGGAGTCTATGTCGTCTCTTTTGATAGACCTGGATATGGAGAAAGTGACCCGCATCCAAAGCGAACAGTAAAGAGTTTGGCATTAGATGTTGAAGAACTTGGTGATCAGCTAGGACTGGGTCCTAAGTTTTATGTAATTGGCTTGTCAATGGGTGGCCAAGCAGTTTGGGGTTGTCTCAAGTATATCCCTCATAGATTGGCAGGAGCTTCTCTACTTGCTCCAGTTATCAACTATTGGTGGCCTAGTTTTCCTGCAAACTTATCTAAGGAAGGTTTTTCCAGCCAACTACCACAGGATCAGTGGACACAAAGTGTTGCTCATCATCTTCCATGGCTAACTTATTGGTGGAACACTCAGAAACTCTTTCCTGTTTTGAGTATTTTAGCCGGTAGGCATGAGATCTTTTCCAGTCAAGATATTGAAATATTGCGCTCTCTTGAAAGGAGGCCAGTGGATCAGACTCCTAAAGGAGAAAAGAAAGAAAGTCAAAACAAAGAAGAATATGTGAAACAACAAGGAGATTTTGAATCCTTCCACCGTGATCTGATGATTGGATTTGGGAAATGGGAATTCGATCCAATGCTTCTTGAAAACATATTTCCTAAGAATGAAGGATCCGTCCATCTATGGCAAGGCGACGAGGACAAACTCGTGCCTGTTAAGCTACAACGTTATATTGCTCAAAAACTTCCTTGGATTCGTTACCGTGAGTTACCTGGTGCAGGCCATTTGTTTGTTTTCACAAGGAAAATGAGTGAAGAAATTCTGAGGTCATTGCTTGTTCAATGAAATGAAGCCATTGCTTGTCCAATGGAATGAAGGCGTTCTTTTAATTGTAGTTTCGTATTTTCTTTCAGCTACATTTCTTTTGGGTTATACGTAAACTTCAGAGTATGCTTTTATGCTTCTTTTTTTTCCACACGTATGTTCGAATGGATAAATAAAGCAATTTTTTTTTT ATGTACCTAAGAATTGTAGGCGTCATTTTAATTGGATTGTCAGCATGGGCATTTTCAGCCATTCGCCCTCCACCTCCTAAAATCTGTGGTTCTGTTGGTGGTCCGCCAATAACTGCTCCAAGAATAAAACTTAGAGATGGAAGGCATTTGGCTTATAAGGAGCATGGTGTTCCCAGAACAGTAGCCAAGTACAAGATCATATATATTCATGGCTTTTCTAATAGCAGACATGATGCAGCAGTTGCAGTTTTTCCTTCTCCAGGCTTCCTTGAGGAACTCGGAGTCTATGTCGTCTCTTTTGATAGACCTGGATATGGAGAAAGTGACCCGCATCCAAAGCGAACAGTAAAGAGTTTGGCATTAGATGTTGAAGAACTTGGTGATCAGCTAGGACTGGGTCCTAAGTTTTATGTAATTGGCTTGTCAATGGGTGGCCAAGCAGTTTGGGGTTGTCTCAAGTATATCCCTCATAGATTGGCAGGAGCTTCTCTACTTGCTCCAGTTATCAACTATTGGTGGCCTAGTTTTCCTGCAAACTTATCTAAGGAAGGTTTTTCCAGCCAACTACCACAGGATCAGTGGACACAAAGTGTTGCTCATCATCTTCCATGGCTAACTTATTGGTGGAACACTCAGAAACTCTTTCCTGTTTTGAGTATTTTAGCCGGTAGGCATGAGATCTTTTCCAGTCAAGATATTGAAATATTGCGCTCTCTTGAAAGGAGGCCAGTGGATCAGACTCCTAAAGGAGAAAAGAAAGAAAGTCAAAACAAAGAAGAATATGTGAAACAACAAGGAGATTTTGAATCCTTCCACCGTGATCTGATGATTGGATTTGGGAAATGGGAATTCGATCCAATGCTTCTTGAAAACATATTTCCTAAGAATGAAGGATCCGTCCATCTATGGCAAGGCGACGAGGACAAACTCGTGCCTGTTAAGCTACAACGTTATATTGCTCAAAAACTTCCTTGGATTCGTTACCGTGAGTTACCTGGTGCAGGCCATTTGTTTGTTTTCACAAGGAAAATGAGTGAAGAAATTCTGAGGTCATTGCTTGTTCAATGA MYLRIVGVILIGLSAWAFSAIRPPPPKICGSVGGPPITAPRIKLRDGRHLAYKEHGVPRTVAKYKIIYIHGFSNSRHDAAVAVFPSPGFLEELGVYVVSFDRPGYGESDPHPKRTVKSLALDVEELGDQLGLGPKFYVIGLSMGGQAVWGCLKYIPHRLAGASLLAPVINYWWPSFPANLSKEGFSSQLPQDQWTQSVAHHLPWLTYWWNTQKLFPVLSILAGRHEIFSSQDIEILRSLERRPVDQTPKGEKKESQNKEEYVKQQGDFESFHRDLMIGFGKWEFDPMLLENIFPKNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIRYRELPGAGHLFVFTRKMSEEILRSLLVQ Homology
BLAST of Lsi10G001330 vs. ExPASy Swiss-Prot
Match: Q9KWQ6 (4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase OS=Rhodococcus jostii (strain RHA1) OX=101510 GN=hsaD PE=1 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 3.1e-04 Identity = 39/133 (29.32%), Postives = 61/133 (45.86%), Query Frame = 0
BLAST of Lsi10G001330 vs. ExPASy TrEMBL
Match: A0A1S3C2M4 (uncharacterized protein LOC103495960 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103495960 PE=4 SV=1) HSP 1 Score: 664.1 bits (1712), Expect = 3.3e-187 Identity = 315/355 (88.73%), Postives = 328/355 (92.39%), Query Frame = 0
BLAST of Lsi10G001330 vs. ExPASy TrEMBL
Match: A0A5D3DKR8 (Putative Catalytic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00170 PE=4 SV=1) HSP 1 Score: 664.1 bits (1712), Expect = 3.3e-187 Identity = 315/355 (88.73%), Postives = 328/355 (92.39%), Query Frame = 0
BLAST of Lsi10G001330 vs. ExPASy TrEMBL
Match: A0A1S4E1L4 (uncharacterized protein LOC103495960 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495960 PE=4 SV=1) HSP 1 Score: 664.1 bits (1712), Expect = 3.3e-187 Identity = 315/355 (88.73%), Postives = 328/355 (92.39%), Query Frame = 0
BLAST of Lsi10G001330 vs. ExPASy TrEMBL
Match: A0A1S4E0W9 (uncharacterized protein LOC103495960 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495960 PE=4 SV=1) HSP 1 Score: 664.1 bits (1712), Expect = 3.3e-187 Identity = 315/355 (88.73%), Postives = 328/355 (92.39%), Query Frame = 0
BLAST of Lsi10G001330 vs. ExPASy TrEMBL
Match: A0A1S3C221 (uncharacterized protein LOC103495960 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103495960 PE=4 SV=1) HSP 1 Score: 664.1 bits (1712), Expect = 3.3e-187 Identity = 315/355 (88.73%), Postives = 328/355 (92.39%), Query Frame = 0
BLAST of Lsi10G001330 vs. NCBI nr
Match: XP_016901876.1 (PREDICTED: uncharacterized protein LOC103495960 isoform X2 [Cucumis melo]) HSP 1 Score: 664.1 bits (1712), Expect = 6.9e-187 Identity = 315/355 (88.73%), Postives = 328/355 (92.39%), Query Frame = 0
BLAST of Lsi10G001330 vs. NCBI nr
Match: XP_016901875.1 (PREDICTED: uncharacterized protein LOC103495960 isoform X1 [Cucumis melo]) HSP 1 Score: 664.1 bits (1712), Expect = 6.9e-187 Identity = 315/355 (88.73%), Postives = 328/355 (92.39%), Query Frame = 0
BLAST of Lsi10G001330 vs. NCBI nr
Match: XP_008455874.1 (PREDICTED: uncharacterized protein LOC103495960 isoform X4 [Cucumis melo] >XP_008455875.1 PREDICTED: uncharacterized protein LOC103495960 isoform X4 [Cucumis melo] >TYK24215.1 putative Catalytic [Cucumis melo var. makuwa]) HSP 1 Score: 664.1 bits (1712), Expect = 6.9e-187 Identity = 315/355 (88.73%), Postives = 328/355 (92.39%), Query Frame = 0
BLAST of Lsi10G001330 vs. NCBI nr
Match: XP_008455873.1 (PREDICTED: uncharacterized protein LOC103495960 isoform X3 [Cucumis melo]) HSP 1 Score: 664.1 bits (1712), Expect = 6.9e-187 Identity = 315/355 (88.73%), Postives = 328/355 (92.39%), Query Frame = 0
BLAST of Lsi10G001330 vs. NCBI nr
Match: KAA0040660.1 (putative Catalytic [Cucumis melo var. makuwa]) HSP 1 Score: 661.0 bits (1704), Expect = 5.8e-186 Identity = 314/355 (88.45%), Postives = 327/355 (92.11%), Query Frame = 0
BLAST of Lsi10G001330 vs. TAIR 10
Match: AT2G36290.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 433.3 bits (1113), Expect = 1.8e-121 Identity = 205/336 (61.01%), Postives = 241/336 (71.73%), Query Frame = 0
BLAST of Lsi10G001330 vs. TAIR 10
Match: AT3G48410.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 433.3 bits (1113), Expect = 1.8e-121 Identity = 196/347 (56.48%), Postives = 247/347 (71.18%), Query Frame = 0
BLAST of Lsi10G001330 vs. TAIR 10
Match: AT3G54240.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 432.2 bits (1110), Expect = 4.1e-121 Identity = 201/348 (57.76%), Postives = 249/348 (71.55%), Query Frame = 0
BLAST of Lsi10G001330 vs. TAIR 10
Match: AT1G74300.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 423.7 bits (1088), Expect = 1.5e-118 Identity = 202/349 (57.88%), Postives = 248/349 (71.06%), Query Frame = 0
BLAST of Lsi10G001330 vs. TAIR 10
Match: AT1G74280.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 421.4 bits (1082), Expect = 7.2e-118 Identity = 201/350 (57.43%), Postives = 251/350 (71.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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