Lsi09G017300 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G017300
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Squamosa promoter-binding-like protein 16
Location	chr09: 25940387 .. 25943863 (-)
RNA-Seq Expression	Lsi09G017300
Synteny	Lsi09G017300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCACCATTCCTTCGGGTCTCTCTCTCCCATCATTCCTCTTTAACCCTCAACTCATAAAAACAAACACACTCTGTCCCTTTCTTTGCCACTCATTTCTATGCTTTTTTCTCATTATTTTTCTTCTCTTCTCTAAGATTTTTCCTTCTCTCCCACCACAATGCCTTGGAGTTGGGCCTAAAGAGGAAACCTGAAGACTTCCAAAATACCCATTTCTCACTCCCATCTTTCTCTTCTTCCTTTTTCCCAATTACCCACTATCCCTTTCTTCTCCCTTCCCTTTATCATCATCAAAGTACATTATCCACTCTTCCCAATTTTGCATTCCCTTTTTTTTCTTTTTCTTTTGCAACTCTGTTTTCCAGTTTCTTCCCCCTTTTGCTTGTTTTTGTAATCTCTTTGCTCTCTACAACTGTTCAAAAAGCTTCCATAGATCGAACTTTGGTGCCCATAATGTTGAAATCCGGTTTCCTTTTGGGTTTTGAGACAATTTCTCATTGTTCTGTTTCTTCAGTTCTTCCTATTTTGTCTCCTGTTTAAGCTTTCTCAGGTTTCTGAGATGAAGATGGAGCTTGACTTGTGAATTTTTAAGAGGTACCCATCATTTTAAACTTCCAATTCGTTGGCTATTTTTGTTTGTTTTTGTATGTGGCTAATCTTTAGTACGAATATTCAATTTATAGGGATTGCAACTTTTAGTTGTGGAGACAGAAATTGAAATTAGTTTATCATTTCATGGGGTGAAAAGAAAAATGATGATGCTGCAGAATTTGGTTTCAGTTGTTAGTGAAGTAGACAGTTCAATGTTTGCTGTAATGGTGAATTTTAATATTGATGATAGTGAGCTACTTTTTCCAAAATTGACTGTAGATCTTAAAGGAAAGTGACTAAAGTGGATATTTCCTGTAGATGGTCAATATTCCTTTTCTTTTGGAACCTAAAATTTGATCTAGTTGAGGAAATTTTGGGAGTATTGATTATATTACTTGTGTGCAATGATTTTGAAGGGGAAAGAGAAGCTTGTATGATTTCTGTTCCACTTTGTTTGTTTGTATTGTATTTACTTAAGCCTTAAATTGTATCTTGTTATCCCTGTCGAACCCTTTTTGTTCATCGTTCGGCGTCTGGTTGCTTTCCATTCTGATTTAATCTTTATTAACAGTGTTCCTAAGGGTGTAAAGTTGAACAGGGAAGGATCCTGATTGAGGTATTTTCTGTTGGAAATGAGTTAAAGCACCTTGAGAATCAATCTTGTTTGGAGAAAAGAAAAACGTTCCGTAAATCGCTACTGTAGTAGAAAACTGAGAGTGTGTTGGAGTAGAGGAAGTTGCTTGATGTATTGGAAACTCAGGGGCATTGGTAATATGGGCGAAAGGTCTATGGATGACATGAAAGGAACTAGAGTTGCTTTGATCGAGTCATCGTCTTCGAGATTAATGAAGAGGTCACGTGCTCCTGGAAGCGTAGCCCAAGTCCCTTCGTGTATGGTTGATGGCTGCAGTTCAGACCTTAGCAAATGCAGGGACTATCATCGTCGCCATAAAGTATGCGAGCTCCATTCTAAAACACCGAAAGTAACCATTTGCGGTCAGGAACAACGATTCTGCCAGCAGTGTAGCAGGTGGGTTAGAATGTTTAGAACATCATTATGTTGCAATTTACTTCATTGATTCTGCCTTACATTAATTTTCATGGTTTTCTTTTCTGATCATTAGAATTTAAGTTATGTAGATGGGATATATACTCTTAAGCTTGCTGTTTTTCCATCTTGTCCTATATCATCTTGTACTTGGAAACTTCATCCATTTCAACTTTCTCCATAATTTTCGTTTTCTAAGCATTTTCTAGAATTTATATAAATCTTTTTGGACTTGAAGTTTTGCATTATGCTCTTAGTGAGGAGTGTTATTGAGCTTATGATATGTGGTATGCTTGATACAATTTCGGTTGTAGGTGGGAGAAGCTCTTTTCTTTTACACTTTTTTACCATCTTGAATTTGCATTTGCATTTGTTTTTCTGTTGTAACATGTATAAGTCGTGCTCGTGTCGTTACTCCTACTACCCTGGAAATGGAGGTTAAATAGAGTGGATCAAGAAGCACGGGTCAATGTGCACAATCATGGTTATTTATTGAATCAACATAGGAAACAAAGACATCTTCTCAAATTGTTGTAAAACATACTACATCTATGTGCTTTCCTCCATAAGAACCCCATAACATTCCCTCATGGATAAATTTCAAAATGTGCTGTTTTTGCTTTTCACCAGGTTGAATCAATGTTGAATGCAAATCTTTGTGAGAGTTACATTTTGTGTTTTTTATACTTCTTATTTTTGTCTGGTTGGTTCCCTTCTTGGCATTTGCTTCAGTTCCTTTAACATGTTCTTGTAGATTCCATTCTTTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAACGTCTTGATGGGCACAACCGACGTCGAAGAAAGCCTCAACCAGCGACCATGACACTAAATGCAGGAAGATTTCTCTATGGCAACCAAGGTTCGTATTATCAGTTTAGGCATGGTTTTCCAGTGCAAGAATTCCATTTACTATAATGACTGCTCCCAATGTTTTCGTTATCATTTTGTCGTTGAAAGATGAGCCAATGCGAAGTGCATATGACTTCTTTGAGCAGGTCCAAGATTCTTACCATTCGGTAATCAATTACTGTCTGCCAGCAATGATGTGAACTCTTCTTGGATTGGAATAATCAAACCTGAGAACAACACGCCTCTTTGCGGTGGCAACTCACAGTTTGACTTTACTGACAGAAGAAAAAGTACGTTGCCCGGGTTGTTGGCTTCTGATTACAAAGAAAAACAACTAGCAATCTCTTGCATCCCTATAGGACTGCTTCCCAAATCATCTGACACTCAGCCATTTCTCAACGTTGGATCCAGCAATGCTGGGAATGTTCAGAAAGTGCTCGGAAATGGATCGAATCGGTTCTTCGACTCTGACTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGCCAGGGGAGATTAATCTAAGCTCCATGAGCCAATCCAACCTCATCTCTCCAGCCCATTTCATCCACAGCGACGGTCTTGGCTTGGAGAGTGACCCCATTAATTCTGGTTTGGTCTCGGACGGTAGCAGCGATGCCAATATTCGGTGCTACTCAACGTTCCAAGATGGACCTGATGGATCATCTGTTGATTTATTCAGGTTTTGAAACATGAAAGTTGGATCATTCTTCTAGGTTCTGAGATAGATTTATCTAGTATGCTTCTTTTGTTCTGTGAATTTTAAGGAATGCTTTTGTTTTGTGTGTGAAATGTCTCTTTCAATGTTTTTACTTTGTTCAAACTTGAAATTTTGAGTAATAATTTTCTGGCTCTATTTAGTTCCTCTTGGAAGAGTCAGTCAACTTAAAAAATTGTTGAACAATGCTTATGCACTCTGTTCTCTCTAGTTGATTTTGTT

mRNA sequence

CCACCATTCCTTCGGGTCTCTCTCTCCCATCATTCCTCTTTAACCCTCAACTCATAAAAACAAACACACTCTGTCCCTTTCTTTGCCACTCATTTCTATGCTTTTTTCTCATTATTTTTCTTCTCTTCTCTAAGATTTTTCCTTCTCTCCCACCACAATGCCTTGGAGTTGGGCCTAAAGAGGAAACCTGAAGACTTCCAAAATACCCATTTCTCACTCCCATCTTTCTCTTCTTCCTTTTTCCCAATTACCCACTATCCCTTTCTTCTCCCTTCCCTTTATCATCATCAAAGTACATTATCCACTCTTCCCAATTTTGCATTCCCTTTTTTTTCTTTTTCTTTTGCAACTCTGTTTTCCAGTTTCTTCCCCCTTTTGCTTGTTTTTGTAATCTCTTTGCTCTCTACAACTGTTCAAAAAGCTTCCATAGATCGAACTTTGGTGCCCATAATGTTGAAATCCGGTTTCCTTTTGGGTTTTGAGACAATTTCTCATTGTTCTGTTTCTTCAGTTCTTCCTATTTTGTCTCCTGTTTAAGCTTTCTCAGGTTTCTGAGATGAAGATGGAGCTTGACTTGTGAATTTTTAAGAGTGTTCCTAAGGGTGTAAAGTTGAACAGGGAAGGATCCTGATTGAGGTATTTTCTGTTGGAAATGAGTTAAAGCACCTTGAGAATCAATCTTGTTTGGAGAAAAGAAAAACGTTCCGTAAATCGCTACTGTAGTAGAAAACTGAGAGTGTGTTGGAGTAGAGGAAGTTGCTTGATGTATTGGAAACTCAGGGGCATTGGTAATATGGGCGAAAGGTCTATGGATGACATGAAAGGAACTAGAGTTGCTTTGATCGAGTCATCGTCTTCGAGATTAATGAAGAGGTCACGTGCTCCTGGAAGCGTAGCCCAAGTCCCTTCGTGTATGGTTGATGGCTGCAGTTCAGACCTTAGCAAATGCAGGGACTATCATCGTCGCCATAAAGTATGCGAGCTCCATTCTAAAACACCGAAAGTAACCATTTGCGGTCAGGAACAACGATTCTGCCAGCAGTGTAGCAGATTCCATTCTTTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAACGTCTTGATGGGCACAACCGACGTCGAAGAAAGCCTCAACCAGCGACCATGACACTAAATGCAGGAAGATTTCTCTATGGCAACCAAGGTCCAAGATTCTTACCATTCGGTAATCAATTACTGTCTGCCAGCAATGATGTGAACTCTTCTTGGATTGGAATAATCAAACCTGAGAACAACACGCCTCTTTGCGGTGGCAACTCACAGTTTGACTTTACTGACAGAAGAAAAAGTACGTTGCCCGGGTTGTTGGCTTCTGATTACAAAGAAAAACAACTAGCAATCTCTTGCATCCCTATAGGACTGCTTCCCAAATCATCTGACACTCAGCCATTTCTCAACGTTGGATCCAGCAATGCTGGGAATGTTCAGAAAGTGCTCGGAAATGGATCGAATCGGTTCTTCGACTCTGACTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGCCAGGGGAGATTAATCTAAGCTCCATGAGCCAATCCAACCTCATCTCTCCAGCCCATTTCATCCACAGCGACGGTCTTGGCTTGGAGAGTGACCCCATTAATTCTGGTTTGGTCTCGGACGGTAGCAGCGATGCCAATATTCGGTGCTACTCAACGTTCCAAGATGGACCTGATGGATCATCTGTTGATTTATTCAGGTTTTGAAACATGAAAGTTGGATCATTCTTCTAGGTTCTGAGATAGATTTATCTAGTATGCTTCTTTTGTTCTGTGAATTTTAAGGAATGCTTTTGTTTTGTGTGTGAAATGTCTCTTTCAATGTTTTTACTTTGTTCAAACTTGAAATTTTGAGTAATAATTTTCTGGCTCTATTTAGTTCCTCTTGGAAGAGTCAGTCAACTTAAAAAATTGTTGAACAATGCTTATGCACTCTGTTCTCTCTAGTTGATTTTGTT

Coding sequence (CDS)

ATGTATTGGAAACTCAGGGGCATTGGTAATATGGGCGAAAGGTCTATGGATGACATGAAAGGAACTAGAGTTGCTTTGATCGAGTCATCGTCTTCGAGATTAATGAAGAGGTCACGTGCTCCTGGAAGCGTAGCCCAAGTCCCTTCGTGTATGGTTGATGGCTGCAGTTCAGACCTTAGCAAATGCAGGGACTATCATCGTCGCCATAAAGTATGCGAGCTCCATTCTAAAACACCGAAAGTAACCATTTGCGGTCAGGAACAACGATTCTGCCAGCAGTGTAGCAGATTCCATTCTTTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAACGTCTTGATGGGCACAACCGACGTCGAAGAAAGCCTCAACCAGCGACCATGACACTAAATGCAGGAAGATTTCTCTATGGCAACCAAGGTCCAAGATTCTTACCATTCGGTAATCAATTACTGTCTGCCAGCAATGATGTGAACTCTTCTTGGATTGGAATAATCAAACCTGAGAACAACACGCCTCTTTGCGGTGGCAACTCACAGTTTGACTTTACTGACAGAAGAAAAAGTACGTTGCCCGGGTTGTTGGCTTCTGATTACAAAGAAAAACAACTAGCAATCTCTTGCATCCCTATAGGACTGCTTCCCAAATCATCTGACACTCAGCCATTTCTCAACGTTGGATCCAGCAATGCTGGGAATGTTCAGAAAGTGCTCGGAAATGGATCGAATCGGTTCTTCGACTCTGACTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGCCAGGGGAGATTAATCTAAGCTCCATGAGCCAATCCAACCTCATCTCTCCAGCCCATTTCATCCACAGCGACGGTCTTGGCTTGGAGAGTGACCCCATTAATTCTGGTTTGGTCTCGGACGGTAGCAGCGATGCCAATATTCGGTGCTACTCAACGTTCCAAGATGGACCTGATGGATCATCTGTTGATTTATTCAGGTTTTGA

Protein sequence

MYWKLRGIGNMGERSMDDMKGTRVALIESSSSRLMKRSRAPGSVAQVPSCMVDGCSSDLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVNSSWIGIIKPENNTPLCGGNSQFDFTDRRKSTLPGLLASDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNAGNVQKVLGNGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLISPAHFIHSDGLGLESDPINSGLVSDGSSDANIRCYSTFQDGPDGSSVDLFRF

Homology

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BLAST of Lsi09G017300 vs. ExPASy Swiss-Prot
Match: Q49I55 (Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 2.8e-44
Identity = 123/284 (43.31%), Postives = 150/284 (52.82%), Query Frame = 0


Query: 8   IGNMGERSMDDMKGTRVALIESSSSRLMKRSRAPG--SVAQVPSCMVDGCSSDLSKCRDY 67
           +G MGE      +  R A   ++ +    R   PG     Q PSC VDGC +DL KCRDY
Sbjct: 63  LGGMGECEPGAARREREA---AAGAAKRPRPAGPGGQQQQQCPSCAVDGCRADLGKCRDY 122

Query: 68  HRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQ 127
           HRRHKVCE HSKTP V + G+E RFCQQCSRFH L EFD  KRSCRKRLDGHNRRRRKPQ
Sbjct: 123 HRRHKVCEAHSKTPVVVVAGREMRFCQQCSRFHLLAEFDADKRSCRKRLDGHNRRRRKPQ 182

Query: 128 PATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVNSSW-IGIIKPE-------NNTPLCG 187
           P TM   +  F+   QG RF PF +  L A      SW  G++K E       +  PL  
Sbjct: 183 PDTMA--SASFIASQQGTRFSPFAHPRLEA------SWPPGVMKTEESPYHITHQIPLGS 242

Query: 188 GNS--QFDFTDRRKST----LPGLLASDYKEKQLAISCIPIGLLPKSSDT-QPFLNVG-- 247
            +S  Q  F     +T      G      +E +++ +   +   P ++   QP L  G  
Sbjct: 243 SSSSRQQHFVALGAATPAYAKEGRRFPFLQEGEISFATGVVLEPPAAAPACQPLLRTGAP 302

Query: 248 --SSNAGNVQKVLGNGSNRFFDSDCALSLLSTPVEPGEINLSSM 271
             SS AG  +     G  R  DSDCALSLLS P     I++S M
Sbjct: 303 SESSGAGGSKMFSDQGLARVLDSDCALSLLSAPANSSGIDVSRM 335

[Close]

BLAST of Lsi09G017300 vs. ExPASy Swiss-Prot
Match: Q49I57 (Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.6e-44
Identity = 123/285 (43.16%), Postives = 150/285 (52.63%), Query Frame = 0


Query: 8   IGNMGERSMDDMKGTRVALIESSSSRLMKRSRAPG---SVAQVPSCMVDGCSSDLSKCRD 67
           +G MGE      +  R A   ++ +    R   PG      Q PSC VDGC +DL KCRD
Sbjct: 63  LGGMGECEPGAARREREA---AAGAAKRPRPAGPGGQQQQQQCPSCAVDGCRADLGKCRD 122

Query: 68  YHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKP 127
           YHRRHKVCE HSKTP V + G+E RFCQQCSRFH L EFD  KRSCRKRLDGHNRRRRKP
Sbjct: 123 YHRRHKVCEAHSKTPVVVVAGREMRFCQQCSRFHLLAEFDADKRSCRKRLDGHNRRRRKP 182

Query: 128 QPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVNSSW-IGIIKPE-------NNTPLC 187
           QP TM   +  F+   QG RF PF +  L A      SW  G++K E       +  PL 
Sbjct: 183 QPDTMA--SASFIASQQGTRFSPFAHPRLEA------SWPPGVMKTEESPYHITHQIPLG 242

Query: 188 GGNS--QFDFTDRRKST----LPGLLASDYKEKQLAISCIPIGLLPKSSDT-QPFLNVG- 247
             +S  Q  F     +T      G      +E +++ +   +   P ++   QP L  G 
Sbjct: 243 SSSSSRQQHFVALGAATPAYAKEGRRFPFLQEGEISFATGVVLEPPAAAPACQPLLRTGA 302

Query: 248 ---SSNAGNVQKVLGNGSNRFFDSDCALSLLSTPVEPGEINLSSM 271
              SS AG  +     G  R  DSDCALSLLS P     I++S M
Sbjct: 303 PSESSGAGGSKMFSDQGLARVLDSDCALSLLSAPANSSGIDVSRM 336

[Close]

BLAST of Lsi09G017300 vs. ExPASy Swiss-Prot
Match: Q6YZE8 (Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL16 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 8.1e-44
Identity = 113/268 (42.16%), Postives = 139/268 (51.87%), Query Frame = 0


Query: 22  TRVALIESSSSRLMKRSRAPGSVAQVPSCMVDGCSSDLSKCRDYHRRHKVCELHSKTPKV 81
           T  A   SS+     R  A     Q PSC VDGC  DLSKCRDYHRRHKVCE HSKTP V
Sbjct: 90  TGAAAAASSAPAKRPRGAAAAGQQQCPSCAVDGCKEDLSKCRDYHRRHKVCEAHSKTPLV 149

Query: 82  TICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMTLNAGRFLYGNQ 141
            + G+E RFCQQCSRFH L EFD+ KRSCRKRLDGHNRRRRKPQP  M  N+  +L   Q
Sbjct: 150 VVSGREMRFCQQCSRFHLLQEFDEAKRSCRKRLDGHNRRRRKPQPDPM--NSASYLASQQ 209

Query: 142 GPRFLPFGNQLLSASNDVNSSWIGIIKPENNTPLCGGNSQFDFTDRRK----STLPGLLA 201
           G RF PF      A+    +SW G+IK E +            + R++    ST  G   
Sbjct: 210 GARFSPF------ATPRPEASWTGMIKTEESPYYTHHQIPLGISSRQQHFVGSTSDGGRR 269

Query: 202 SDY-KEKQLAISC------IPI---GLLPKSSDTQPFLNV--------GSSNAGNVQKVL 261
             + +E +++         +P+        +S  QP L          G   +G  +   
Sbjct: 270 FPFLQEGEISFGTGAGAGGVPMDQAAAAAAASVCQPLLKTVAPPPPPHGGGGSGGGKMFS 329

Query: 262 GNGSNRFFDSDCALSLLSTPVEPGEINL 268
             G  +  DSDCALSLLS P     I++
Sbjct: 330 DGGLTQVLDSDCALSLLSAPANSTAIDV 349

[Close]

BLAST of Lsi09G017300 vs. ExPASy Swiss-Prot
Match: B9DI20 (Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SPL13A PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 4.2e-40
Identity = 121/303 (39.93%), Postives = 155/303 (51.16%), Query Frame = 0


Query: 15  SMDDMKGTRVALIESSSSRLMKRSRAPG-SVAQVPSCMVDGCSSDLSKCRDYHRRHKVCE 74
           S+   K + +A  E S S   KR+R  G    Q+P C+VDGC SD S CR+YH+RHKVC+
Sbjct: 65  SLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCD 124

Query: 75  LHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMTLNA 134
           +HSKTP VTI G +QRFCQQCSRFH+L EFD+ KRSCRKRLDGHNRRRRKPQP  +   A
Sbjct: 125 VHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPA 184

Query: 135 GRFLYGNQGPRFLPF--GNQLLSASNDVNSSWIGIIKPENNTPLCGGNSQFDFTDRRKST 194
             F  G QG + L F  G+ +   ++ +N SW              GNS          +
Sbjct: 185 -NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSW--------------GNSLVSVAVAANGS 244

Query: 195 LPGLLASDYKEKQLAISCI--PIGLLPKS--SDTQPFLNVGSSNAGNVQKVLGNGSNRFF 254
             G   S       A + I  PI   P S  S  + F  +    +     +    ++   
Sbjct: 245 SYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQEEESSRTASLCERMTSCIH 304

Query: 255 DSDCALSLLSTPVEPGEINLSSMSQSNLISPAHFIHSD-------GLGLESDPINSGLVS 304
           DSDCALSLLS+         SS S  +L+ P   +  +       G GL     N+  VS
Sbjct: 305 DSDCALSLLSS---------SSSSVPHLLQPPLSLSQEAVETVFYGSGLFE---NASAVS 340

[Close]

BLAST of Lsi09G017300 vs. ExPASy Swiss-Prot
Match: P0DI11 (Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SPL13B PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 4.2e-40
Identity = 121/303 (39.93%), Postives = 155/303 (51.16%), Query Frame = 0


Query: 15  SMDDMKGTRVALIESSSSRLMKRSRAPG-SVAQVPSCMVDGCSSDLSKCRDYHRRHKVCE 74
           S+   K + +A  E S S   KR+R  G    Q+P C+VDGC SD S CR+YH+RHKVC+
Sbjct: 65  SLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCD 124

Query: 75  LHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMTLNA 134
           +HSKTP VTI G +QRFCQQCSRFH+L EFD+ KRSCRKRLDGHNRRRRKPQP  +   A
Sbjct: 125 VHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPA 184

Query: 135 GRFLYGNQGPRFLPF--GNQLLSASNDVNSSWIGIIKPENNTPLCGGNSQFDFTDRRKST 194
             F  G QG + L F  G+ +   ++ +N SW              GNS          +
Sbjct: 185 -NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSW--------------GNSLVSVAVAANGS 244

Query: 195 LPGLLASDYKEKQLAISCI--PIGLLPKS--SDTQPFLNVGSSNAGNVQKVLGNGSNRFF 254
             G   S       A + I  PI   P S  S  + F  +    +     +    ++   
Sbjct: 245 SYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQEEESSRTASLCERMTSCIH 304

Query: 255 DSDCALSLLSTPVEPGEINLSSMSQSNLISPAHFIHSD-------GLGLESDPINSGLVS 304
           DSDCALSLLS+         SS S  +L+ P   +  +       G GL     N+  VS
Sbjct: 305 DSDCALSLLSS---------SSSSVPHLLQPPLSLSQEAVETVFYGSGLFE---NASAVS 340

[Close]

BLAST of Lsi09G017300 vs. ExPASy TrEMBL
Match: A0A0A0KAG4 (SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G094760 PE=4 SV=1)

HSP 1 Score: 640.2 bits (1650), Expect = 4.8e-180
Identity = 313/328 (95.43%), Postives = 320/328 (97.56%), Query Frame = 0


Query: 1   MYWKLRGIGNMGERSMDDMKGTRVALIESSSSRLMKRSRAPGSVAQVPSCMVDGCSSDLS 60
           MYW+LRGIGNM ERSMDDMKGTRVALIESSSSRLMKRSRAPGS AQVPSCMVDGCSSDLS
Sbjct: 1   MYWELRGIGNMDERSMDDMKGTRVALIESSSSRLMKRSRAPGSGAQVPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVNSSWIGIIKPENNTPLCGGNS 180
           RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLL+AS+DV+SSWIG+IKPENN PLCGGNS
Sbjct: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLTASSDVSSSWIGMIKPENNVPLCGGNS 180

Query: 181 QFDFTDRRKSTLPGLLASDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNAGNVQKVLG 240
           QFDFTDRRKS LPG L+SDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSN GNVQKVLG
Sbjct: 181 QFDFTDRRKSMLPGSLSSDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNGGNVQKVLG 240

Query: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLISPAHFIHSDGLGLESDPINSGLVS 300
           NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLI PAHFIHSDGLGLE DPI+SGLVS
Sbjct: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLIPPAHFIHSDGLGLEGDPISSGLVS 300

Query: 301 DGSSDANIRCYSTFQDGPDGSSVDLFRF 329
           DGSSDANIRCYSTFQDGPDGSSVDLFRF
Sbjct: 301 DGSSDANIRCYSTFQDGPDGSSVDLFRF 328

[Close]

BLAST of Lsi09G017300 vs. ExPASy TrEMBL
Match: A0A5D3DM54 (Squamosa promoter-binding-like protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002310 PE=4 SV=1)

HSP 1 Score: 638.6 bits (1646), Expect = 1.4e-179
Identity = 313/328 (95.43%), Postives = 319/328 (97.26%), Query Frame = 0


Query: 1   MYWKLRGIGNMGERSMDDMKGTRVALIESSSSRLMKRSRAPGSVAQVPSCMVDGCSSDLS 60
           MYW+LRGIGNM ERSMDDMKGTRVALIESSSSRLMKRSRAPGS AQVPSCMVDGCSSDLS
Sbjct: 1   MYWELRGIGNMDERSMDDMKGTRVALIESSSSRLMKRSRAPGSGAQVPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVNSSWIGIIKPENNTPLCGGNS 180
           RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSAS+DV+SSWIG+IKPENN PLCGGNS
Sbjct: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASSDVSSSWIGMIKPENNAPLCGGNS 180

Query: 181 QFDFTDRRKSTLPGLLASDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNAGNVQKVLG 240
           QFDFTDRRKS LPG L+SDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSN GNVQKVLG
Sbjct: 181 QFDFTDRRKSMLPGSLSSDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNGGNVQKVLG 240

Query: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLISPAHFIHSDGLGLESDPINSGLVS 300
           NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLI PAHFIHSDGLGLE DPI+SGLVS
Sbjct: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLIPPAHFIHSDGLGLEGDPISSGLVS 300

Query: 301 DGSSDANIRCYSTFQDGPDGSSVDLFRF 329
           DGSSDANIRCYSTFQDGPDGSS DLFRF
Sbjct: 301 DGSSDANIRCYSTFQDGPDGSSGDLFRF 328

[Close]

BLAST of Lsi09G017300 vs. ExPASy TrEMBL
Match: A0A1S3CB53 (squamosa promoter-binding-like protein 16 OS=Cucumis melo OX=3656 GN=LOC103498851 PE=4 SV=1)

HSP 1 Score: 637.1 bits (1642), Expect = 4.0e-179
Identity = 312/328 (95.12%), Postives = 318/328 (96.95%), Query Frame = 0


Query: 1   MYWKLRGIGNMGERSMDDMKGTRVALIESSSSRLMKRSRAPGSVAQVPSCMVDGCSSDLS 60
           MYW+LRGIGNM ERSMDDMKGTRVALIESSSSRLMKRSRAPGS AQVPSCMVDGCSSDLS
Sbjct: 1   MYWELRGIGNMDERSMDDMKGTRVALIESSSSRLMKRSRAPGSGAQVPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSL EFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLAEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVNSSWIGIIKPENNTPLCGGNS 180
           RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSAS+DV+SSWIG+IKPENN PLCGGNS
Sbjct: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASSDVSSSWIGMIKPENNAPLCGGNS 180

Query: 181 QFDFTDRRKSTLPGLLASDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNAGNVQKVLG 240
           QFDFTDRRKS LPG L+SDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSN GNVQKVLG
Sbjct: 181 QFDFTDRRKSMLPGSLSSDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNGGNVQKVLG 240

Query: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLISPAHFIHSDGLGLESDPINSGLVS 300
           NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLI PAHFIHSDGLGLE DPI+SGLVS
Sbjct: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLIPPAHFIHSDGLGLEGDPISSGLVS 300

Query: 301 DGSSDANIRCYSTFQDGPDGSSVDLFRF 329
           DGSSDANIRCYSTFQDGPDGSS DLFRF
Sbjct: 301 DGSSDANIRCYSTFQDGPDGSSGDLFRF 328

[Close]

BLAST of Lsi09G017300 vs. ExPASy TrEMBL
Match: A0A6J1GQX7 (squamosa promoter-binding-like protein 16 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456630 PE=4 SV=1)

HSP 1 Score: 599.7 bits (1545), Expect = 7.1e-168
Identity = 295/328 (89.94%), Postives = 310/328 (94.51%), Query Frame = 0


Query: 1   MYWKLRGIGNMGERSMDDMKGTRVALIESSSSRLMKRSRAPGSVAQVPSCMVDGCSSDLS 60
           MY +LRGIGNMG+ SMDDMKGTRV+LIESS+SRLMKRSRAPGS  QVPSCMVDGCSSDLS
Sbjct: 1   MYLRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVNSSWIGIIKPENNTPLCGGNS 180
           RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDV+SSWIG+IKPE+N PLC GNS
Sbjct: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNS 180

Query: 181 QFDFTDRRKSTLPGLLASDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNAGNVQKVLG 240
           QFDF DRRKS LPG LA DYKEKQLAISCIPIGLLPKSSD +PFL+V SSN  NVQKVLG
Sbjct: 181 QFDFGDRRKSMLPGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDVESSNGENVQKVLG 240

Query: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLISPAHFIHSDGLGLESDPINSGLVS 300
           NGS++FF+SDCALSLLSTPVEPGEINLSSMSQSNLI+PAHFIHSDGLGLESDP+NSGLVS
Sbjct: 241 NGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVS 300

Query: 301 DGSSDANIRCYSTFQDGPDGSSVDLFRF 329
           DGSS ANIRCY TFQDG  GSSVDLFR+
Sbjct: 301 DGSSHANIRCYPTFQDGLAGSSVDLFRY 328

[Close]

BLAST of Lsi09G017300 vs. ExPASy TrEMBL
Match: A0A6J1JSQ0 (squamosa promoter-binding-like protein 16 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488017 PE=4 SV=1)

HSP 1 Score: 594.3 bits (1531), Expect = 3.0e-166
Identity = 289/328 (88.11%), Postives = 309/328 (94.21%), Query Frame = 0


Query: 1   MYWKLRGIGNMGERSMDDMKGTRVALIESSSSRLMKRSRAPGSVAQVPSCMVDGCSSDLS 60
           MY +LRGIGNMG+ SMDDMKGTRV+LIESS+SRLMKRSRAPGS  Q+PSCMVDGCSSDLS
Sbjct: 1   MYLRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQIPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVNSSWIGIIKPENNTPLCGGNS 180
           RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDV+SSWIG+IKPE+N P+C GNS
Sbjct: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPVCSGNS 180

Query: 181 QFDFTDRRKSTLPGLLASDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNAGNVQKVLG 240
           QFDF DRRKS LPG LA DYKEKQ+AISCIP+GLLPKSSD +P+L+V S N GNVQKVLG
Sbjct: 181 QFDFGDRRKSMLPGSLACDYKEKQVAISCIPVGLLPKSSDARPYLDVESCNRGNVQKVLG 240

Query: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLISPAHFIHSDGLGLESDPINSGLVS 300
           NG ++FF+SDCALSLLSTPVEPGEINLSSMSQSNLI+PAHFIHSDGLGLESDP+NSGLVS
Sbjct: 241 NGPDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVS 300

Query: 301 DGSSDANIRCYSTFQDGPDGSSVDLFRF 329
           DGSS ANIRCY TFQDG  GSSVDLFR+
Sbjct: 301 DGSSHANIRCYPTFQDGLAGSSVDLFRY 328

[Close]

BLAST of Lsi09G017300 vs. NCBI nr
Match: XP_004140535.1 (squamosa promoter-binding-like protein 16 isoform X1 [Cucumis sativus] >KGN46458.1 hypothetical protein Csa_005603 [Cucumis sativus])

HSP 1 Score: 640.2 bits (1650), Expect = 9.8e-180
Identity = 313/328 (95.43%), Postives = 320/328 (97.56%), Query Frame = 0


Query: 1   MYWKLRGIGNMGERSMDDMKGTRVALIESSSSRLMKRSRAPGSVAQVPSCMVDGCSSDLS 60
           MYW+LRGIGNM ERSMDDMKGTRVALIESSSSRLMKRSRAPGS AQVPSCMVDGCSSDLS
Sbjct: 1   MYWELRGIGNMDERSMDDMKGTRVALIESSSSRLMKRSRAPGSGAQVPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVNSSWIGIIKPENNTPLCGGNS 180
           RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLL+AS+DV+SSWIG+IKPENN PLCGGNS
Sbjct: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLTASSDVSSSWIGMIKPENNVPLCGGNS 180

Query: 181 QFDFTDRRKSTLPGLLASDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNAGNVQKVLG 240
           QFDFTDRRKS LPG L+SDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSN GNVQKVLG
Sbjct: 181 QFDFTDRRKSMLPGSLSSDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNGGNVQKVLG 240

Query: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLISPAHFIHSDGLGLESDPINSGLVS 300
           NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLI PAHFIHSDGLGLE DPI+SGLVS
Sbjct: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLIPPAHFIHSDGLGLEGDPISSGLVS 300

Query: 301 DGSSDANIRCYSTFQDGPDGSSVDLFRF 329
           DGSSDANIRCYSTFQDGPDGSSVDLFRF
Sbjct: 301 DGSSDANIRCYSTFQDGPDGSSVDLFRF 328

[Close]

BLAST of Lsi09G017300 vs. NCBI nr
Match: KAA0039816.1 (squamosa promoter-binding-like protein 16 [Cucumis melo var. makuwa] >TYK24681.1 squamosa promoter-binding-like protein 16 [Cucumis melo var. makuwa])

HSP 1 Score: 638.6 bits (1646), Expect = 2.9e-179
Identity = 313/328 (95.43%), Postives = 319/328 (97.26%), Query Frame = 0


Query: 1   MYWKLRGIGNMGERSMDDMKGTRVALIESSSSRLMKRSRAPGSVAQVPSCMVDGCSSDLS 60
           MYW+LRGIGNM ERSMDDMKGTRVALIESSSSRLMKRSRAPGS AQVPSCMVDGCSSDLS
Sbjct: 1   MYWELRGIGNMDERSMDDMKGTRVALIESSSSRLMKRSRAPGSGAQVPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVNSSWIGIIKPENNTPLCGGNS 180
           RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSAS+DV+SSWIG+IKPENN PLCGGNS
Sbjct: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASSDVSSSWIGMIKPENNAPLCGGNS 180

Query: 181 QFDFTDRRKSTLPGLLASDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNAGNVQKVLG 240
           QFDFTDRRKS LPG L+SDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSN GNVQKVLG
Sbjct: 181 QFDFTDRRKSMLPGSLSSDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNGGNVQKVLG 240

Query: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLISPAHFIHSDGLGLESDPINSGLVS 300
           NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLI PAHFIHSDGLGLE DPI+SGLVS
Sbjct: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLIPPAHFIHSDGLGLEGDPISSGLVS 300

Query: 301 DGSSDANIRCYSTFQDGPDGSSVDLFRF 329
           DGSSDANIRCYSTFQDGPDGSS DLFRF
Sbjct: 301 DGSSDANIRCYSTFQDGPDGSSGDLFRF 328

[Close]

BLAST of Lsi09G017300 vs. NCBI nr
Match: XP_008459851.1 (PREDICTED: squamosa promoter-binding-like protein 16 [Cucumis melo])

HSP 1 Score: 637.1 bits (1642), Expect = 8.3e-179
Identity = 312/328 (95.12%), Postives = 318/328 (96.95%), Query Frame = 0


Query: 1   MYWKLRGIGNMGERSMDDMKGTRVALIESSSSRLMKRSRAPGSVAQVPSCMVDGCSSDLS 60
           MYW+LRGIGNM ERSMDDMKGTRVALIESSSSRLMKRSRAPGS AQVPSCMVDGCSSDLS
Sbjct: 1   MYWELRGIGNMDERSMDDMKGTRVALIESSSSRLMKRSRAPGSGAQVPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSL EFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLAEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVNSSWIGIIKPENNTPLCGGNS 180
           RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSAS+DV+SSWIG+IKPENN PLCGGNS
Sbjct: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASSDVSSSWIGMIKPENNAPLCGGNS 180

Query: 181 QFDFTDRRKSTLPGLLASDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNAGNVQKVLG 240
           QFDFTDRRKS LPG L+SDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSN GNVQKVLG
Sbjct: 181 QFDFTDRRKSMLPGSLSSDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNGGNVQKVLG 240

Query: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLISPAHFIHSDGLGLESDPINSGLVS 300
           NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLI PAHFIHSDGLGLE DPI+SGLVS
Sbjct: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLIPPAHFIHSDGLGLEGDPISSGLVS 300

Query: 301 DGSSDANIRCYSTFQDGPDGSSVDLFRF 329
           DGSSDANIRCYSTFQDGPDGSS DLFRF
Sbjct: 301 DGSSDANIRCYSTFQDGPDGSSGDLFRF 328

[Close]

BLAST of Lsi09G017300 vs. NCBI nr
Match: XP_038876153.1 (squamosa promoter-binding-like protein 16 [Benincasa hispida] >XP_038876155.1 squamosa promoter-binding-like protein 16 [Benincasa hispida] >XP_038876156.1 squamosa promoter-binding-like protein 16 [Benincasa hispida])

HSP 1 Score: 633.3 bits (1632), Expect = 1.2e-177
Identity = 312/328 (95.12%), Postives = 318/328 (96.95%), Query Frame = 0


Query: 1   MYWKLRGIGNMGERSMDDMKGTRVALIESSSSRLMKRSRAPGSVAQVPSCMVDGCSSDLS 60
           MYWKLRGIGNMGERSMD+MKGTRVALIESSSSRLMKRSRAPGS AQVPSCMVDGCSSDLS
Sbjct: 1   MYWKLRGIGNMGERSMDNMKGTRVALIESSSSRLMKRSRAPGSGAQVPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTI GQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTISGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVNSSWIGIIKPENNTPLCGGNS 180
           RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQ LSASNDV+SSWIG+IKPENN PL GG+S
Sbjct: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQFLSASNDVSSSWIGMIKPENNAPLSGGDS 180

Query: 181 QFDFTDRRKSTLPGLLASDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNAGNVQKVLG 240
           QFDFTDRRKS LPG L+SDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSN GNVQKVLG
Sbjct: 181 QFDFTDRRKSMLPGSLSSDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNGGNVQKVLG 240

Query: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLISPAHFIHSDGLGLESDPINSGLVS 300
           NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLI  AHFIHSDGLGLESDPINSGLVS
Sbjct: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLIPSAHFIHSDGLGLESDPINSGLVS 300

Query: 301 DGSSDANIRCYSTFQDGPDGSSVDLFRF 329
           DGSSDANI+CYSTFQDGPDGSSVDLFRF
Sbjct: 301 DGSSDANIQCYSTFQDGPDGSSVDLFRF 328

[Close]

BLAST of Lsi09G017300 vs. NCBI nr
Match: XP_031743614.1 (squamosa promoter-binding-like protein 16 isoform X2 [Cucumis sativus])

HSP 1 Score: 610.5 bits (1573), Expect = 8.3e-171
Identity = 303/328 (92.38%), Postives = 310/328 (94.51%), Query Frame = 0


Query: 1   MYWKLRGIGNMGERSMDDMKGTRVALIESSSSRLMKRSRAPGSVAQVPSCMVDGCSSDLS 60
           MYW+LRGIGNM ERSMDDMKGTRVALIESSSSRLMKRSRAPGS AQVPSCMVDGCSSDLS
Sbjct: 1   MYWELRGIGNMDERSMDDMKGTRVALIESSSSRLMKRSRAPGSGAQVPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCS          RKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCS----------RKRSCRKRLDGHNRR 120

Query: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVNSSWIGIIKPENNTPLCGGNS 180
           RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLL+AS+DV+SSWIG+IKPENN PLCGGNS
Sbjct: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLTASSDVSSSWIGMIKPENNVPLCGGNS 180

Query: 181 QFDFTDRRKSTLPGLLASDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNAGNVQKVLG 240
           QFDFTDRRKS LPG L+SDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSN GNVQKVLG
Sbjct: 181 QFDFTDRRKSMLPGSLSSDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNGGNVQKVLG 240

Query: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLISPAHFIHSDGLGLESDPINSGLVS 300
           NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLI PAHFIHSDGLGLE DPI+SGLVS
Sbjct: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLIPPAHFIHSDGLGLEGDPISSGLVS 300

Query: 301 DGSSDANIRCYSTFQDGPDGSSVDLFRF 329
           DGSSDANIRCYSTFQDGPDGSSVDLFRF
Sbjct: 301 DGSSDANIRCYSTFQDGPDGSSVDLFRF 318

[Close]

BLAST of Lsi09G017300 vs. TAIR 10
Match: AT5G50570.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 166.8 bits (421), Expect = 3.0e-41
Identity = 121/303 (39.93%), Postives = 155/303 (51.16%), Query Frame = 0


Query: 15  SMDDMKGTRVALIESSSSRLMKRSRAPG-SVAQVPSCMVDGCSSDLSKCRDYHRRHKVCE 74
           S+   K + +A  E S S   KR+R  G    Q+P C+VDGC SD S CR+YH+RHKVC+
Sbjct: 65  SLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCD 124

Query: 75  LHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMTLNA 134
           +HSKTP VTI G +QRFCQQCSRFH+L EFD+ KRSCRKRLDGHNRRRRKPQP  +   A
Sbjct: 125 VHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPA 184

Query: 135 GRFLYGNQGPRFLPF--GNQLLSASNDVNSSWIGIIKPENNTPLCGGNSQFDFTDRRKST 194
             F  G QG + L F  G+ +   ++ +N SW              GNS          +
Sbjct: 185 -NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSW--------------GNSLVSVAVAANGS 244

Query: 195 LPGLLASDYKEKQLAISCI--PIGLLPKS--SDTQPFLNVGSSNAGNVQKVLGNGSNRFF 254
             G   S       A + I  PI   P S  S  + F  +    +     +    ++   
Sbjct: 245 SYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQEEESSRTASLCERMTSCIH 304

Query: 255 DSDCALSLLSTPVEPGEINLSSMSQSNLISPAHFIHSD-------GLGLESDPINSGLVS 304
           DSDCALSLLS+         SS S  +L+ P   +  +       G GL     N+  VS
Sbjct: 305 DSDCALSLLSS---------SSSSVPHLLQPPLSLSQEAVETVFYGSGLFE---NASAVS 340

[Close]

BLAST of Lsi09G017300 vs. TAIR 10
Match: AT5G50670.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 166.8 bits (421), Expect = 3.0e-41
Identity = 121/303 (39.93%), Postives = 155/303 (51.16%), Query Frame = 0


Query: 15  SMDDMKGTRVALIESSSSRLMKRSRAPG-SVAQVPSCMVDGCSSDLSKCRDYHRRHKVCE 74
           S+   K + +A  E S S   KR+R  G    Q+P C+VDGC SD S CR+YH+RHKVC+
Sbjct: 65  SLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCD 124

Query: 75  LHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMTLNA 134
           +HSKTP VTI G +QRFCQQCSRFH+L EFD+ KRSCRKRLDGHNRRRRKPQP  +   A
Sbjct: 125 VHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPA 184

Query: 135 GRFLYGNQGPRFLPF--GNQLLSASNDVNSSWIGIIKPENNTPLCGGNSQFDFTDRRKST 194
             F  G QG + L F  G+ +   ++ +N SW              GNS          +
Sbjct: 185 -NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSW--------------GNSLVSVAVAANGS 244

Query: 195 LPGLLASDYKEKQLAISCI--PIGLLPKS--SDTQPFLNVGSSNAGNVQKVLGNGSNRFF 254
             G   S       A + I  PI   P S  S  + F  +    +     +    ++   
Sbjct: 245 SYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQEEESSRTASLCERMTSCIH 304

Query: 255 DSDCALSLLSTPVEPGEINLSSMSQSNLISPAHFIHSD-------GLGLESDPINSGLVS 304
           DSDCALSLLS+         SS S  +L+ P   +  +       G GL     N+  VS
Sbjct: 305 DSDCALSLLSS---------SSSSVPHLLQPPLSLSQEAVETVFYGSGLFE---NASAVS 340

[Close]

BLAST of Lsi09G017300 vs. TAIR 10
Match: AT5G50570.2 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 166.8 bits (421), Expect = 3.0e-41
Identity = 121/303 (39.93%), Postives = 155/303 (51.16%), Query Frame = 0


Query: 15  SMDDMKGTRVALIESSSSRLMKRSRAPG-SVAQVPSCMVDGCSSDLSKCRDYHRRHKVCE 74
           S+   K + +A  E S S   KR+R  G    Q+P C+VDGC SD S CR+YH+RHKVC+
Sbjct: 65  SLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCD 124

Query: 75  LHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMTLNA 134
           +HSKTP VTI G +QRFCQQCSRFH+L EFD+ KRSCRKRLDGHNRRRRKPQP  +   A
Sbjct: 125 VHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPA 184

Query: 135 GRFLYGNQGPRFLPF--GNQLLSASNDVNSSWIGIIKPENNTPLCGGNSQFDFTDRRKST 194
             F  G QG + L F  G+ +   ++ +N SW              GNS          +
Sbjct: 185 -NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSW--------------GNSLVSVAVAANGS 244

Query: 195 LPGLLASDYKEKQLAISCI--PIGLLPKS--SDTQPFLNVGSSNAGNVQKVLGNGSNRFF 254
             G   S       A + I  PI   P S  S  + F  +    +     +    ++   
Sbjct: 245 SYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQEEESSRTASLCERMTSCIH 304

Query: 255 DSDCALSLLSTPVEPGEINLSSMSQSNLISPAHFIHSD-------GLGLESDPINSGLVS 304
           DSDCALSLLS+         SS S  +L+ P   +  +       G GL     N+  VS
Sbjct: 305 DSDCALSLLSS---------SSSSVPHLLQPPLSLSQEAVETVFYGSGLFE---NASAVS 340

[Close]

BLAST of Lsi09G017300 vs. TAIR 10
Match: AT2G42200.1 (squamosa promoter binding protein-like 9 )

HSP 1 Score: 142.1 bits (357), Expect = 7.8e-34
Identity = 93/250 (37.20%), Postives = 130/250 (52.00%), Query Frame = 0


Query: 29  SSSSRLMKRSRAPGS--VAQVPSCMVDGCSSDLSKCRDYHRRHKVCELHSKTPKVTICGQ 88
           SS  R  +R R  GS    Q+P C V+GC  DL+  + Y+ RH+VC +HSKTPKVT+ G 
Sbjct: 51  SSGGRSNRRVRGGGSGQSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAGI 110

Query: 89  EQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMTLNAGRFLYGNQGPRFL 148
           EQRFCQQCSRFH L EFD  KRSCR+RL GHN RRRKPQPA++++ A R  YG   P   
Sbjct: 111 EQRFCQQCSRFHQLPEFDLEKRSCRRRLAGHNERRRKPQPASLSVLASR--YGRIAPSLY 170

Query: 149 PFGNQLLSASNDVNSSWIGIIKPENNTPLCGGNSQFDFTDRRKSTLPGLLASDYKEKQLA 208
             G+        +N S++             GN +  +        P     D +  +  
Sbjct: 171 ENGDA------GMNGSFL-------------GNQEIGW--------PSSRTLDTRVMRRP 230

Query: 209 ISCIPIGLLPKSSDTQPFLNVG--SSNAGNVQKVLGNGSNRFFDSDCALSLLSTPVEPGE 268
           +S     + P +  +Q  +  G  S ++  +            DS+CALSLLS P +P +
Sbjct: 231 VSSPSWQINPMNVFSQGSVGGGGTSFSSPEIMDTKLESYKGIGDSNCALSLLSNPHQPHD 271

Query: 269 INLSSMSQSN 275
            N ++ + +N
Sbjct: 291 NNNNNNNNNN 271

[Close]

BLAST of Lsi09G017300 vs. TAIR 10
Match: AT1G27370.1 (squamosa promoter binding protein-like 10 )

HSP 1 Score: 132.9 bits (333), Expect = 4.7e-31
Identity = 69/145 (47.59%), Postives = 92/145 (63.45%), Query Frame = 0


Query: 14  RSMDDMKGTRVALIESSSSRLMKRSRAPGSVAQVPSCMVDGCSSDLSKCRDYHRRHKVCE 73
           R+ +D+    + L+ + S    K++++ G   QVP C +DGC  DLS  +DYHR+H+VCE
Sbjct: 141 RNNNDLSAVSMNLL-TPSVVARKKTKSCGQSMQVPRCQIDGCELDLSSSKDYHRKHRVCE 200

Query: 74  LHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMTLNA 133
            HSK PKV + G E+RFCQQCSRFH++ EFD++KRSCRKRL  HN RRRKPQ     LN+
Sbjct: 201 THSKCPKVVVSGLERRFCQQCSRFHAVSEFDEKKRSCRKRLSHHNARRRKPQ-GVFPLNS 260

Query: 134 GRFLYGNQGPRFLPFGNQLLSASND 159
            R     Q    L  G  L + S +
Sbjct: 261 ERVFDRRQHTSMLWNGLSLNTRSEE 283

The following BLAST results are available for this feature:

BLAST of Lsi09G017300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q49I55	2.8e-44	43.31	Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1	[more]
Q49I57	3.6e-44	43.16	Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=3 SV=1	[more]
Q6YZE8	8.1e-44	42.16	Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=399...	[more]
B9DI20	4.2e-40	39.93	Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
P0DI11	4.2e-40	39.93	Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]

BLAST of Lsi09G017300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAG4	4.8e-180	95.43	SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G094760 PE...	[more]
A0A5D3DM54	1.4e-179	95.43	Squamosa promoter-binding-like protein 16 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3CB53	4.0e-179	95.12	squamosa promoter-binding-like protein 16 OS=Cucumis melo OX=3656 GN=LOC10349885...	[more]
A0A6J1GQX7	7.1e-168	89.94	squamosa promoter-binding-like protein 16 isoform X1 OS=Cucurbita moschata OX=36...	[more]
A0A6J1JSQ0	3.0e-166	88.11	squamosa promoter-binding-like protein 16 isoform X1 OS=Cucurbita maxima OX=3661...	[more]

BLAST of Lsi09G017300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140535.1	9.8e-180	95.43	squamosa promoter-binding-like protein 16 isoform X1 [Cucumis sativus] >KGN46458...	[more]
KAA0039816.1	2.9e-179	95.43	squamosa promoter-binding-like protein 16 [Cucumis melo var. makuwa] >TYK24681.1...	[more]
XP_008459851.1	8.3e-179	95.12	PREDICTED: squamosa promoter-binding-like protein 16 [Cucumis melo]	[more]
XP_038876153.1	1.2e-177	95.12	squamosa promoter-binding-like protein 16 [Benincasa hispida] >XP_038876155.1 sq...	[more]
XP_031743614.1	8.3e-171	92.38	squamosa promoter-binding-like protein 16 isoform X2 [Cucumis sativus]	[more]

BLAST of Lsi09G017300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50570.1	3.0e-41	39.93	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50670.1	3.0e-41	39.93	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50570.2	3.0e-41	39.93	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT2G42200.1	7.8e-34	37.20	squamosa promoter binding protein-like 9	[more]
AT1G27370.1	4.7e-31	47.59	squamosa promoter binding protein-like 10	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 42..111 e-value: 9.5E-32 score: 111.0
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 48..129
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 50..123 e-value: 7.2E-29 score: 99.9
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 47..124 score: 31.718283
None	No IPR available	PANTHER	PTHR31251:SF144	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 13A ISOFORM X1	coord: 4..321
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 4..321

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G017300.1	Lsi09G017300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding