Lsi08G010940 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTACGTCTGTGTTATGTGGTGATGGGTAACAGCATGAAGTATTTGGATTTTCTCCGAAGATCTTATATTTTTCTGGATTCATCTGCATTTTTTTCCCTATATAATTGTAATATTATATGGTTTCTCTCAAGCCAGCCTTTTGTTATAACCCTGTATGATAGTGGATTTCTACCTCATACTTACCTATAATTATAGATGACTAATTGCTTTTGTATCTTTATGGTTATCGGGTGATTTCAATTAGCTTCATGCATCTTTGTTACTAAACAGCTATTGATACTTTTACTTCTTAGGCTTTAAAAACGTTGAAGATATTATTGTTGTAATAACAAAACTATAGTTTGTAAGTTTTAGTTTGTTAGTTGTTGAATAGTTTGTTTGTTATTTTGATTTGTTAAATTTCTTTAAACTTGTACTCACACTTTCCTTATAAATAAAGGTTATCTCCCCTCATTTAGAGGTAGAGATTCATTTGATTCAATTCTAGAAATTGGTATTACACCATTTATAGAAATAGTTAATCTTGTTAAGTGATAATAGTAGGGATGTTGAAGACAAAAATTTATTGGCAACTGACAGGGGCTTCTTTATTTATTTATTTATTTAACTTTTATCTAATTATTATTATTATGTACAATCACACACATTTAGGATCTGAAAATTGAGTCTTACACCTCATACCTCCTCAAGGTTTATATCTTGCCTCTTTAAGAGGAAAAGCCTCAAGATGCCTTTAGCCTATTAAAACTTTGATTTTGTGTAGGCCTCAAGAGCAAGGTTGTTCAAGGAGTACAAAGAGGTTCAAAGAGAAAAGGTAGCAGATCCAGATATTCAACTGGTTTGTGACGATTCCAATATTTTTAAATGGACAGCCCTAATCAAGGTAAGCCTCTTGATGATTCAGATGAAAAATTGATTTCAGAGTTGTTTCTTACCATGATTGATATGCACTTTATTTAGGGACCGTCAGAGACTCCTTTTGAAGGTGGTGTTTTTCAACTTGCCTTCTCCGTACCTGAGCAATACCCTTTGCAACCTCCTCAAGTGCGGTTCTTAACGAAAATTTTCCATCCAAATGTTCATTTTAAGGTAGAAGTCACCCGGATCTTTGTTCTAGATTATGCTAACTATGAGCCCTTCTGTCACAATTGTTAATGTTATTGTTTTTTATGAACTATACTTGGCTAGTATCTGCTCTATATACCGAAATGCCCTACGTGAACTGATGAAGTTACAACCACATTACCTCTAGTAAACTTTGAGAGCCCCCAAATCCCGAATGAGGGAACCCTAAGAAAGCCCACCAACTCCAACTACCTACAGACCATGGCCAATCTATGCTAGATCTGACTAACTTTCCACCAGCAAGATTGTGGTAAGGATTATAAAGAGGTGATCATGATTCATGGGGAGGAAAAGCAACAATATGGGAGGGGGTGTCGTTGTCCAAGGGAGCGTAACTAAATACTGTTGAGCCTCCATGCATATGGGAGTAGGGGGAGAATATATAGAAGGTAATACACGGGCAGGGGAGAGGAATATACAAAAAGAAATTTAGTGGTATTTCATGTGTGGGAGGCCTTGGATTTTCAAATCATCTTGTGGATTCTAGGGAGGCACAACAAGAAATTGAGTAGATGATATCCCTTCTGTTGAAAGGTACAACAGGAGTTGCAATGATGAAATAAGCCAATTTGATGAAACAACCGGTATAATCGTTATAAAATAATTGATGTGGTGTTGCAAACTCTAGGGATATGGGAGTGAACTTAAAAGTTGAAGAACCCTATGGGAGGAGGCAGAGTTGCAATTAAGGTGGATATTTGTATGGGGGAGTTTGACAATGACCTCTCCTTCAAACGTAAAATGTATGCTTGTCAAAAGGATGCTAGTGCTATGATTGAATCTGCCTCGTGGGGAGAAGGTTTGTTTTCATGGTTTGCTGGGGTATGTGCGATCTTGTGGATTTTGTGGGGTGAGCGGAATAGTAAAACTTTTAGAGGGGTGGATAAAGACCCTAGTGAGGTTTGGTCTCTTGTTCGCTTTCATGTTTCTTTGGGGGTTTCCGTTTTGAAGACCTTTTGTAACTACTCTATTGGCGTTATTTTGCATAGTTGGAGTCCCTTCCTGTAGAGGGAGGTTGTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGAGCATGGCTTTTTGTACGGCCGTGTATTCTTTCATTTCATTCTCAATAAAAGTTGTTTCTATAAAATAAATAAATATATATACACACACATACATATAGATGGGATTGGGAGTGGGAAGCTAGATATGCTGATTTTTTATGGAGAGGATCCAAAAGCGTAGATATATTTTGTGGACTGCTTTCATATGAGAGGAATTCTTGTTGCCGAGCAATTCTGTGCATTAGGGATGGACTAGTGTTGGTGAATGGCGATCATTCACGTTTGTTTGAACCCTTTTGTGACTGTAGTCTTATTTTTTTACGACCTTACTTGAACAGGATCTTTTCTATAGGTTGTACAACTGTGTCTTTGAGTTCTAAGGAGACTGTAGTCTTATTTTACGGTGAACCTTATTTTTAATACTTTTCATTTCTGTCATTAAACATATAAACATAACTCTTTTCAGTGGTTGAATGGAACCACACTTTATACTTATCGCTGTGCCTTCGTGCAGACGGGTGAGATCTGCCTAGATATATTGAAGAATGCGTGGAGCCCAGCATGGACTCTGCAATCTGTTTGTAGGGCTATAATTGCTTTGATGGCTCATCCTGAACCTGATAGCCCGCTAAACTGTGATTCTGGTGAGTTTACATGCTTGCTTATTTGAATCTTTGGATGGTGTGATAACTGGTAATGTAGCAAAGTAGTTAAAGAACTCATTTAATAATGATTTTGTTTTTGAAATTTATACATGTTTTCTTCTATATTCCATACCATGGTTTTCACATTTTCTAGAAAAAATACTTGAATTCTTGCCAATTCTAAAAACAAAAATAAAATTTTGAAACTAAGACTGAAGCAAGTTGATCGGGTAATGTTCAGTTATATATTTTGAAAACAAATCAACTGAATATATTTTAGTAAATGAGATATTAGGAGACCTCAATGGGATGGTCTTCTTGTAAATCCTTTGTGTTGGGGAGGGGACGCCTGTCCCTTTGGCCTTTTTTTTCTTTTTTTTTTTTTTTGTTAAGGGAGATATTAGGGGACCTCACTCTTTGCAATAGGTTCATGACCTACCCGACTAATCTTTGGGAAAGTTTGGCCCTTCCTAAGCCAACTTCTAGAGGCACTAGGATTAGATTTTAAATGATTAAGACCCCATTTGTTAACTATCTGGTTTTTTTGCTTATGAAAATTGTACTTCTTTTTTTCTTTCTAGATGAGTTACTCTTTTCATTGTTAATTGGTTTTGAGATGGAACCCCATATTATCGAATAAAACTCATAGATGGAATTAGTACGGGCCTAAATATGTAGACTTGAACTTAAGACCATGGAGAGAATCTCCCAACATTTCAAATACGAGGGTTTGCCCTTGGAGGTAAATCGACTGAAGCATGTTGCTCGGTTTCGTAAACTATTTCCAGATCAAACTGGGTGACATATAAAGCATAGCATTTTCCCGAGGCAGATGCCAGTGACCTTTAATTCTTTTAATTATTGTGTGGGTGTTTACAGGAAACCTCCTGCGTTCGGGCGACGTCCGAGGATATCAATCAATGGCAAGGATGTACACAAGGCTTGCTGCCATGCCCAAAAAGGGCTGATTTGACATTGCTTCCTCTTTGCCAAACATTTGAATTTGACGTTGCTGCTGTCACCAAGGGAGATTGCAGAATGTGTTATTGATCACACCAACAAATTAAATATGATTATCCAGACATCTTATGTAAAGTAGTAAAGCACATTCCATCTTCTGTGTGTTCACTTTTATTTGTTGGTTCACTAGATGGATTGCCTCGTGTTTCCCTTTTCTCATCATTTTAATTGTTCTATGTGTTGATAGTTCTGTCTTCAATATAAGAAATCAATACTTATTTAGATTTCTTTTTTAATTTTAATGTATCTTTTTTTTTAATAAATTAAAAAATGATGTTGAAAATAATGTATTGTTGGAGGTGCTAATAAAAATAGGGGTCTTTGTACAGTATTGAAATATATTGAATTTTGAATAAATCGTCTTTTAG ATGTACGGACCGTCAGAGACTCCTTTTGAAGGTGGTGTTTTTCAACTTGCCTTCTCCGTACCTGAGCAATACCCTTTGCAACCTCCTCAAGTGCGGTTCTTAACGAAAATTTTCCATCCAAATGTTCATTTTAAGTGGTTGAATGGAACCACACTTTATACTTATCGCTGTGCCTTCGTGCAGACGGGTGAGATCTGCCTAGATATATTGAAGAATGCGTGGAGCCCAGCATGGACTCTGCAATCTGTTTGTAGGGCTATAATTGCTTTGATGGCTCATCCTGAACCTGATAGCCCGCTAAACTGTGATTCTGGAAACCTCCTGCGTTCGGGCGACGTCCGAGGATATCAATCAATGGCAAGGATGTACACAAGGCTTGCTGCCATGCCCAAAAAGGGCTGATTTGACATTGCTTCCTCTTTGCCAAACATTTGAATTTGACGTTGCTGCTGTCACCAAGGGAGATTGCAGAATGTGTTATTGATCACACCAACAAATTAAATATGATTATCCAGACATCTTATGTAAAGTAGTAAAGCACATTCCATCTTCTGTGTGTTCACTTTTATTTGTTGGTTCACTAGATGGATTGCCTCGTGTTTCCCTTTTCTCATCATTTTAATTGTTCTATGTGTTGATAGTTCTGTCTTCAATATAAGAAATCAATACTTATTTAGATTTCTTTTTTAATTTTAATGTATCTTTTTTTTTAATAAATTAAAAAATGATGTTGAAAATAATGTATTGTTGGAGGTGCTAATAAAAATAGGGGTCTTTGTACAGTATTGAAATATATTGAATTTTGAATAAATCGTCTTTTAG ATGTACGGACCGTCAGAGACTCCTTTTGAAGGTGGTGTTTTTCAACTTGCCTTCTCCGTACCTGAGCAATACCCTTTGCAACCTCCTCAAGTGCGGTTCTTAACGAAAATTTTCCATCCAAATGTTCATTTTAAGTGGTTGAATGGAACCACACTTTATACTTATCGCTGTGCCTTCGTGCAGACGGGTGAGATCTGCCTAGATATATTGAAGAATGCGTGGAGCCCAGCATGGACTCTGCAATCTGTTTGTAGGGCTATAATTGCTTTGATGGCTCATCCTGAACCTGATAGCCCGCTAAACTGTGATTCTGGAAACCTCCTGCGTTCGGGCGACGTCCGAGGATATCAATCAATGGCAAGGATGTACACAAGGCTTGCTGCCATGCCCAAAAAGGGCTGA MYGPSETPFEGGVFQLAFSVPEQYPLQPPQVRFLTKIFHPNVHFKWLNGTTLYTYRCAFVQTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG Homology
BLAST of Lsi08G010940 vs. ExPASy Swiss-Prot
Match: Q8LGF7 (Protein PEROXIN-4 OS=Arabidopsis thaliana OX=3702 GN=PEX4 PE=1 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 1.4e-58 Identity = 110/131 (83.97%), Postives = 113/131 (86.26%), Query Frame = 0
BLAST of Lsi08G010940 vs. ExPASy Swiss-Prot
Match: Q86IZ3 (Ubiquitin-conjugating enzyme E2 pex4 OS=Dictyostelium discoideum OX=44689 GN=pex4 PE=3 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 8.4e-40 Identity = 75/124 (60.48%), Postives = 94/124 (75.81%), Query Frame = 0
BLAST of Lsi08G010940 vs. ExPASy Swiss-Prot
Match: Q9P6I1 (Ubiquitin-conjugating enzyme E2 16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ubc16 PE=3 SV=2) HSP 1 Score: 122.1 bits (305), Expect = 4.8e-27 Identity = 62/129 (48.06%), Postives = 78/129 (60.47%), Query Frame = 0
BLAST of Lsi08G010940 vs. ExPASy Swiss-Prot
Match: O60015 (Ubiquitin-conjugating enzyme E2-21 kDa OS=Pichia angusta OX=870730 GN=PEX4 PE=1 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 3.2e-23 Identity = 56/143 (39.16%), Postives = 75/143 (52.45%), Query Frame = 0
BLAST of Lsi08G010940 vs. ExPASy Swiss-Prot
Match: Q9EQX9 (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 3.5e-22 Identity = 54/127 (42.52%), Postives = 77/127 (60.63%), Query Frame = 0
BLAST of Lsi08G010940 vs. ExPASy TrEMBL
Match: A0A6J1KTV6 (protein PEROXIN-4 OS=Cucurbita maxima OX=3661 GN=LOC111496350 PE=3 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 1.4e-58 Identity = 115/131 (87.79%), Postives = 115/131 (87.79%), Query Frame = 0
BLAST of Lsi08G010940 vs. ExPASy TrEMBL
Match: A0A6P4BYD2 (protein PEROXIN-4 OS=Arachis duranensis OX=130453 GN=LOC107470764 PE=3 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 1.4e-58 Identity = 115/131 (87.79%), Postives = 115/131 (87.79%), Query Frame = 0
BLAST of Lsi08G010940 vs. ExPASy TrEMBL
Match: A0A0B2QDV8 (Protein PEROXIN-4 OS=Glycine soja OX=3848 GN=D0Y65_014097 PE=3 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 1.4e-58 Identity = 115/131 (87.79%), Postives = 115/131 (87.79%), Query Frame = 0
BLAST of Lsi08G010940 vs. ExPASy TrEMBL
Match: I1K9A6 (UBC core domain-containing protein OS=Glycine max OX=3847 GN=100305756 PE=3 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 1.4e-58 Identity = 115/131 (87.79%), Postives = 115/131 (87.79%), Query Frame = 0
BLAST of Lsi08G010940 vs. ExPASy TrEMBL
Match: A0A6J1GHB1 (protein PEROXIN-4 OS=Cucurbita moschata OX=3662 GN=LOC111453964 PE=3 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 1.4e-58 Identity = 115/131 (87.79%), Postives = 115/131 (87.79%), Query Frame = 0
BLAST of Lsi08G010940 vs. NCBI nr
Match: KAG5031095.1 (hypothetical protein JHK85_015077 [Glycine max] >KAG5147827.1 hypothetical protein JHK82_014708 [Glycine max]) HSP 1 Score: 240.4 bits (612), Expect = 9.2e-60 Identity = 119/136 (87.50%), Postives = 122/136 (89.71%), Query Frame = 0
BLAST of Lsi08G010940 vs. NCBI nr
Match: KAG5045322.1 (hypothetical protein JHK86_014728 [Glycine max]) HSP 1 Score: 240.4 bits (612), Expect = 9.2e-60 Identity = 119/136 (87.50%), Postives = 122/136 (89.71%), Query Frame = 0
BLAST of Lsi08G010940 vs. NCBI nr
Match: KAF1871641.1 (hypothetical protein Lal_00020435 [Lupinus albus]) HSP 1 Score: 235.3 bits (599), Expect = 3.0e-58 Identity = 115/131 (87.79%), Postives = 115/131 (87.79%), Query Frame = 0
BLAST of Lsi08G010940 vs. NCBI nr
Match: KYP65178.1 (putative ubiquitin carrier protein E2 21 [Cajanus cajan]) HSP 1 Score: 235.3 bits (599), Expect = 3.0e-58 Identity = 115/131 (87.79%), Postives = 115/131 (87.79%), Query Frame = 0
BLAST of Lsi08G010940 vs. NCBI nr
Match: XP_019415934.1 (PREDICTED: protein PEROXIN-4 isoform X1 [Lupinus angustifolius] >XP_019415935.1 PREDICTED: protein PEROXIN-4 isoform X1 [Lupinus angustifolius] >XP_019415936.1 PREDICTED: protein PEROXIN-4 isoform X1 [Lupinus angustifolius] >XP_019415937.1 PREDICTED: protein PEROXIN-4 isoform X2 [Lupinus angustifolius] >KAE9609153.1 putative aminoacyltransferase, E1 ubiquitin-activating enzyme [Lupinus albus] >OIV96562.1 hypothetical protein TanjilG_24215 [Lupinus angustifolius]) HSP 1 Score: 235.3 bits (599), Expect = 3.0e-58 Identity = 115/131 (87.79%), Postives = 115/131 (87.79%), Query Frame = 0
BLAST of Lsi08G010940 vs. TAIR 10
Match: AT5G25760.1 (peroxin4 ) HSP 1 Score: 226.9 bits (577), Expect = 9.8e-60 Identity = 110/131 (83.97%), Postives = 113/131 (86.26%), Query Frame = 0
BLAST of Lsi08G010940 vs. TAIR 10
Match: AT5G25760.2 (peroxin4 ) HSP 1 Score: 226.9 bits (577), Expect = 9.8e-60 Identity = 110/131 (83.97%), Postives = 113/131 (86.26%), Query Frame = 0
BLAST of Lsi08G010940 vs. TAIR 10
Match: AT1G16890.1 (ubiquitin-conjugating enzyme 36 ) HSP 1 Score: 101.7 bits (252), Expect = 4.7e-22 Identity = 51/126 (40.48%), Postives = 78/126 (61.90%), Query Frame = 0
BLAST of Lsi08G010940 vs. TAIR 10
Match: AT1G16890.2 (ubiquitin-conjugating enzyme 36 ) HSP 1 Score: 101.7 bits (252), Expect = 4.7e-22 Identity = 51/126 (40.48%), Postives = 78/126 (61.90%), Query Frame = 0
BLAST of Lsi08G010940 vs. TAIR 10
Match: AT1G16890.3 (ubiquitin-conjugating enzyme 36 ) HSP 1 Score: 101.7 bits (252), Expect = 4.7e-22 Identity = 51/126 (40.48%), Postives = 78/126 (61.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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