Lsi08G010400 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi08G010400
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr08: 18987827 .. 18990337 (-)
RNA-Seq ExpressionLsi08G010400
SyntenyLsi08G010400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTGAAATAAGATCCATTGAAATAAAATTAAAATATCATTTGATAACATAACAAATACATAATGGAAAGAGTATATAATACTACGAGAAAACTATTGCATTAGCTTGAATCTCAGTAGTCAAATTAAACATATCTCAAAATTTTCAACTAGTATGATACTTATATTATCAACTTCGAACTTTTTTTAGTACAGTTGAGGGTAGCACAGATATCGTGCTTACTAATATACTCGTATGTCAATTGAGCTCTGTTTGGACCTGAACCTCGAACTTAGAGATTCGATCCCATAATTTTCTTCTTTTTTTTTTTAAGAGAAAAAAGGGCTTGAAGCCCACTAGAATTTATTGGGCCACTTACCCATTTGGCTGGCTTTGCTTCAGTGACTTGCCTTGGCAGTCCAGCGTCTCTTTCCCACGAGAAAGACGACGACTGGCTCAGAGACTGGATAAGCAAAAACGCCGCTTCACCACTCTCCCACCTCCATTTTTACACTCACTGTAAGTTTCCCGCTTCTCTGAATCTCTCCCATTTTGCAAATTCTTCAATCTCTGCCCTTCCCTAGACTGGAAAACCAAGGCTCCATTGGCCTCCACTTCTTTAATTTTCTTCACATTCGATTAAAATGGAGTTCTAAGCATCAAAACCTTTTGTTTCCTTCCAGTTGAAGGTGTACTATGGATGTAACCTTGCCTGCAAAGCATTATACAGATGGGTTCTGTTTATTTCACCGTCACAGCACCAAAAATCGCGGCCAGAAAGTTAGGGCCAAGGGAAGGGTTTCTCCGGAGACCAATTCTTTAAGGCTTTATGTGGGAGAAAAAGGGAAACCTCGGTTTCTCGTTATTCCTTCTGATGGTCCTGAAGAACAACTTGTTCGTGCGGTTCCGAGGGTCGATACATTTAATTCCAATGGTAGATTGCAACATGGGGAGAAAAATCTCCATACCCATTTGAATGGCTCCAGTTCCTCATCATCTTCTTCGTCAAATCATTCGCAGAGTTTTGAGGAATTCGAGAACAATAATCATCTTCGTCGACTGGTAAGAAATGGGGAATTGGAAGAAGGGTTTAAATTTCTTGAGGATATGGTTTATCGTGGTGATATTCCTGATATAATTGCTTGCACTAGTTTGATTCGTGGTTTGTGTAAAACTGGAAAGACTAGGAAAGCAACTAGGGTAATGGAAATTTTAGAAGATTCTGGGGCTGTTCCTGATGTGATAACTTACAATGTTCTTATTAGTGGTTACTGTAAATCTGGTGAAATTGGCAGTGCTTTGCAACTTTTGGATCGAATGAGTGTTTCTCCTGATGTTGTTACATACAATACAATCTTGCGTACGCTCTGTGATAGTGGGAAATTGAAGCAAGCAATGGAAGTTCTTGACAGACAGTTGCAAAGGGAGTGTTATCCTGATGTAATAACTTACACTATTTTGATTGAAGCAACTTGTAAGGAGAGTGGAGTTGGGCAGGCAATGAAATTGTTGGATGAAATGAGGGACAAAGGATGTAAGCCTGATGTTGTTACTTACAATGTTCTTATAAATGGGATTTGTAAGGAAGGAAGGTTAGATGAAGCTATTAAGTTCTTGAATCATATGCCCTCTTATGGCTGCCAACCTAATGTAATCACTCATAACATCATCTTGCGTAGTATGTGTAGTACAGGGAGGTGGATGGACGCCGAGAAGTTGTTGGCTGAAATGGTTCGGAAGGGATGTTCGCCTAGTGTTGTCACTTTCAATATCTTGATTAATTTCTTGTGTCGAAAGGGGTTGCTTGGTCGAGCAATCGATGTTTTGGAGAAGATGCCTCAGCATGGATGTACTCCAAATTCCTTGAGTTACAACCCATTGCTCCATGGATTCTGCAAAGAGAAGAAGATGGATCGGGCGATCGAGTATTTGGATATCATGGTTTCGAGAGGTTGTTACCCTGATATTGTGACTTATAATACTCTATTGACAGCATTGTGCAAAGATGGGAAGGTAGATGTTGCAGTTGAGATACTGAATCAACTTGGTAGCAAAGGTTGTTCTCCAGTATTGATTACATACAACACAGTCATTGATGGGCTGTCAAAGGTAGGTAAAACAGAAGATGCCATAAAACTTCTTGATGAGATGAAGGGAAAAGGACTCAAACCCGATATAATCACGTACTCCTCGCTCGTCGGAGGACTGAGCAGGGAAGGAAAAGTTGATGAAGCAATTGCATTTTTCCATGATTTAGAAGAAATGGGTGTGAAACCAAATGCTATCACATACAACTCTATCATGTTAGGACTCTGTAAGGCTCGACAAACCGTTCGAGCCATCGATTTCTTGGCATACATGGTTGGCAGAGGCTGTAAACCGACCGAGGCTTCATACATGATTCTTATTGAAGGATTGGCCTATGAGGGTTTAGCCAAGGAAGCATTGGAGTTGCTTAATGAATTGTGCTCTAGAGGAGTTGTGAAGAAGAGTTCTGCAGAGCAGGTGGTGGTCAAAAACACTTTTTGA

mRNA sequence

ATGATTGACTTGCCTTGGCAGTCCAGCGTCTCTTTCCCACGAGAAAGACGACGACTGGCTCAGAGACTGGATAAGCAAAAACGCCGCTTCACCACTCTCCCACCTCCATTTTTACACTCACTGTGTACTATGGATGTAACCTTGCCTGCAAAGCATTATACAGATGGGTTCTGTTTATTTCACCGTCACAGCACCAAAAATCGCGGCCAGAAAGTTAGGGCCAAGGGAAGGGTTTCTCCGGAGACCAATTCTTTAAGGCTTTATGTGGGAGAAAAAGGGAAACCTCGGTTTCTCGTTATTCCTTCTGATGGTCCTGAAGAACAACTTGTTCGTGCGGTTCCGAGGGTCGATACATTTAATTCCAATGGTAGATTGCAACATGGGGAGAAAAATCTCCATACCCATTTGAATGGCTCCAGTTCCTCATCATCTTCTTCGTCAAATCATTCGCAGAGTTTTGAGGAATTCGAGAACAATAATCATCTTCGTCGACTGGTAAGAAATGGGGAATTGGAAGAAGGGTTTAAATTTCTTGAGGATATGGTTTATCGTGGTGATATTCCTGATATAATTGCTTGCACTAGTTTGATTCGTGGTTTGTGTAAAACTGGAAAGACTAGGAAAGCAACTAGGGTAATGGAAATTTTAGAAGATTCTGGGGCTGTTCCTGATGTGATAACTTACAATGTTCTTATTAGTGGTTACTGTAAATCTGGTGAAATTGGCAGTGCTTTGCAACTTTTGGATCGAATGAGTGTTTCTCCTGATGTTGTTACATACAATACAATCTTGCGTACGCTCTGTGATAGTGGGAAATTGAAGCAAGCAATGGAAGTTCTTGACAGACAGTTGCAAAGGGAGTGTTATCCTGATGTAATAACTTACACTATTTTGATTGAAGCAACTTGTAAGGAGAGTGGAGTTGGGCAGGCAATGAAATTGTTGGATGAAATGAGGGACAAAGGATGTAAGCCTGATGTTGTTACTTACAATGTTCTTATAAATGGGATTTGTAAGGAAGGAAGGTTAGATGAAGCTATTAAGTTCTTGAATCATATGCCCTCTTATGGCTGCCAACCTAATGTAATCACTCATAACATCATCTTGCGTAGTATGTGTAGTACAGGGAGGTGGATGGACGCCGAGAAGTTGTTGGCTGAAATGGTTCGGAAGGGATGTTCGCCTAGTGTTGTCACTTTCAATATCTTGATTAATTTCTTGTGTCGAAAGGGGTTGCTTGGTCGAGCAATCGATGTTTTGGAGAAGATGCCTCAGCATGGATGTACTCCAAATTCCTTGAGTTACAACCCATTGCTCCATGGATTCTGCAAAGAGAAGAAGATGGATCGGGCGATCGAGTATTTGGATATCATGGTTTCGAGAGGTTGTTACCCTGATATTGTGACTTATAATACTCTATTGACAGCATTGTGCAAAGATGGGAAGGTAGATGTTGCAGTTGAGATACTGAATCAACTTGGTAGCAAAGGTTGTTCTCCAGTATTGATTACATACAACACAGTCATTGATGGGCTGTCAAAGGTAGGTAAAACAGAAGATGCCATAAAACTTCTTGATGAGATGAAGGGAAAAGGACTCAAACCCGATATAATCACGTACTCCTCGCTCGTCGGAGGACTGAGCAGGGAAGGAAAAGTTGATGAAGCAATTGCATTTTTCCATGATTTAGAAGAAATGGGTGTGAAACCAAATGCTATCACATACAACTCTATCATGTTAGGACTCTGTAAGGCTCGACAAACCGTTCGAGCCATCGATTTCTTGGCATACATGGTTGGCAGAGGCTGTAAACCGACCGAGGCTTCATACATGATTCTTATTGAAGGATTGGCCTATGAGGGTTTAGCCAAGGAAGCATTGGAGTTGCTTAATGAATTGTGCTCTAGAGGAGTTGTGAAGAAGAGTTCTGCAGAGCAGGTGGTGGTCAAAAACACTTTTTGA

Coding sequence (CDS)

ATGATTGACTTGCCTTGGCAGTCCAGCGTCTCTTTCCCACGAGAAAGACGACGACTGGCTCAGAGACTGGATAAGCAAAAACGCCGCTTCACCACTCTCCCACCTCCATTTTTACACTCACTGTGTACTATGGATGTAACCTTGCCTGCAAAGCATTATACAGATGGGTTCTGTTTATTTCACCGTCACAGCACCAAAAATCGCGGCCAGAAAGTTAGGGCCAAGGGAAGGGTTTCTCCGGAGACCAATTCTTTAAGGCTTTATGTGGGAGAAAAAGGGAAACCTCGGTTTCTCGTTATTCCTTCTGATGGTCCTGAAGAACAACTTGTTCGTGCGGTTCCGAGGGTCGATACATTTAATTCCAATGGTAGATTGCAACATGGGGAGAAAAATCTCCATACCCATTTGAATGGCTCCAGTTCCTCATCATCTTCTTCGTCAAATCATTCGCAGAGTTTTGAGGAATTCGAGAACAATAATCATCTTCGTCGACTGGTAAGAAATGGGGAATTGGAAGAAGGGTTTAAATTTCTTGAGGATATGGTTTATCGTGGTGATATTCCTGATATAATTGCTTGCACTAGTTTGATTCGTGGTTTGTGTAAAACTGGAAAGACTAGGAAAGCAACTAGGGTAATGGAAATTTTAGAAGATTCTGGGGCTGTTCCTGATGTGATAACTTACAATGTTCTTATTAGTGGTTACTGTAAATCTGGTGAAATTGGCAGTGCTTTGCAACTTTTGGATCGAATGAGTGTTTCTCCTGATGTTGTTACATACAATACAATCTTGCGTACGCTCTGTGATAGTGGGAAATTGAAGCAAGCAATGGAAGTTCTTGACAGACAGTTGCAAAGGGAGTGTTATCCTGATGTAATAACTTACACTATTTTGATTGAAGCAACTTGTAAGGAGAGTGGAGTTGGGCAGGCAATGAAATTGTTGGATGAAATGAGGGACAAAGGATGTAAGCCTGATGTTGTTACTTACAATGTTCTTATAAATGGGATTTGTAAGGAAGGAAGGTTAGATGAAGCTATTAAGTTCTTGAATCATATGCCCTCTTATGGCTGCCAACCTAATGTAATCACTCATAACATCATCTTGCGTAGTATGTGTAGTACAGGGAGGTGGATGGACGCCGAGAAGTTGTTGGCTGAAATGGTTCGGAAGGGATGTTCGCCTAGTGTTGTCACTTTCAATATCTTGATTAATTTCTTGTGTCGAAAGGGGTTGCTTGGTCGAGCAATCGATGTTTTGGAGAAGATGCCTCAGCATGGATGTACTCCAAATTCCTTGAGTTACAACCCATTGCTCCATGGATTCTGCAAAGAGAAGAAGATGGATCGGGCGATCGAGTATTTGGATATCATGGTTTCGAGAGGTTGTTACCCTGATATTGTGACTTATAATACTCTATTGACAGCATTGTGCAAAGATGGGAAGGTAGATGTTGCAGTTGAGATACTGAATCAACTTGGTAGCAAAGGTTGTTCTCCAGTATTGATTACATACAACACAGTCATTGATGGGCTGTCAAAGGTAGGTAAAACAGAAGATGCCATAAAACTTCTTGATGAGATGAAGGGAAAAGGACTCAAACCCGATATAATCACGTACTCCTCGCTCGTCGGAGGACTGAGCAGGGAAGGAAAAGTTGATGAAGCAATTGCATTTTTCCATGATTTAGAAGAAATGGGTGTGAAACCAAATGCTATCACATACAACTCTATCATGTTAGGACTCTGTAAGGCTCGACAAACCGTTCGAGCCATCGATTTCTTGGCATACATGGTTGGCAGAGGCTGTAAACCGACCGAGGCTTCATACATGATTCTTATTGAAGGATTGGCCTATGAGGGTTTAGCCAAGGAAGCATTGGAGTTGCTTAATGAATTGTGCTCTAGAGGAGTTGTGAAGAAGAGTTCTGCAGAGCAGGTGGTGGTCAAAAACACTTTTTGA

Protein sequence

MIDLPWQSSVSFPRERRRLAQRLDKQKRRFTTLPPPFLHSLCTMDVTLPAKHYTDGFCLFHRHSTKNRGQKVRAKGRVSPETNSLRLYVGEKGKPRFLVIPSDGPEEQLVRAVPRVDTFNSNGRLQHGEKNLHTHLNGSSSSSSSSSNHSQSFEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVKNTF
Homology
BLAST of Lsi08G010400 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 893.3 bits (2307), Expect = 1.7e-258
Identity = 446/608 (73.36%), Postives = 508/608 (83.55%), Query Frame = 0

Query: 44  MDVTLPAKHYTDGFCLFHR-HSTKNRGQKVRAKGRVSPETNSLRLYVGEKGKPRFLVIPS 103
           MD+ +      +GFCL  + H    RG K+    R S   +S ++ +G + + R +    
Sbjct: 1   MDLMVSTSSAQEGFCLIQQFHREYKRGNKLDVSCRTSGSISS-KIPLGSRKRNRLV---- 60

Query: 104 DGPEEQLVRAVPRVDTFNSNGRLQHGEKNLHTHLNGSSSSSSSSSNHSQSFEEFENNNHL 163
                 LV A  +V++   NGR Q  E     + N + +   SS N S + E+ E+NNHL
Sbjct: 61  ------LVSAASKVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHL 120

Query: 164 RRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAV 223
           R++VR GELEEGFKFLE+MVY G++PDII CT+LIRG C+ GKTRKA +++EILE SGAV
Sbjct: 121 RQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAV 180

Query: 224 PDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDR 283
           PDVITYNV+ISGYCK+GEI +AL +LDRMSVSPDVVTYNTILR+LCDSGKLKQAMEVLDR
Sbjct: 181 PDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 240

Query: 284 QLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGR 343
            LQR+CYPDVITYTILIEATC++SGVG AMKLLDEMRD+GC PDVVTYNVL+NGICKEGR
Sbjct: 241 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 300

Query: 344 LDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNI 403
           LDEAIKFLN MPS GCQPNVITHNIILRSMCSTGRWMDAEKLLA+M+RKG SPSVVTFNI
Sbjct: 301 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 360

Query: 404 LINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG 463
           LINFLCRKGLLGRAID+LEKMPQHGC PNSLSYNPLLHGFCKEKKMDRAIEYL+ MVSRG
Sbjct: 361 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 420

Query: 464 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAI 523
           CYPDIVTYNT+LTALCKDGKV+ AVEILNQL SKGCSPVLITYNTVIDGL+K GKT  AI
Sbjct: 421 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 480

Query: 524 KLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGL 583
           KLLDEM+ K LKPD ITYSSLVGGLSREGKVDEAI FFH+ E MG++PNA+T+NSIMLGL
Sbjct: 481 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 540

Query: 584 CKARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKS 643
           CK+RQT RAIDFL +M+ RGCKP E SY ILIEGLAYEG+AKEALELLNELC++G++KKS
Sbjct: 541 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKS 597

Query: 644 SAEQVVVK 651
           SAEQV  K
Sbjct: 601 SAEQVAGK 597

BLAST of Lsi08G010400 vs. ExPASy Swiss-Prot
Match: Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 6.9e-127
Identity = 237/536 (44.22%), Postives = 334/536 (62.31%), Query Frame = 0

Query: 120 NSNGR--LQHGEKNLHTHLNGSSS-SSSSSSNHSQS--FEEFENNNHLRRLVRNGELEEG 179
           N NGR     G +NL T     ++  +     HSQS  F + +      R  R+G   E 
Sbjct: 49  NDNGRSFSSSGARNLQTTTTTDATLPTERRQQHSQSLGFRDTQMLKIFHRSCRSGNYIES 108

Query: 180 FKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVPDVITYNVLISG 239
              LE MV +G  PD+I CT LI+G        KA RVMEILE  G  PDV  YN LI+G
Sbjct: 109 LHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVFAYNALING 168

Query: 240 YCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRECYPD 299
           +CK   I  A ++LDRM     SPD VTYN ++ +LC  GKL  A++VL++ L   C P 
Sbjct: 169 FCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPT 228

Query: 300 VITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIKFLN 359
           VITYTILIEAT  E GV +A+KL+DEM  +G KPD+ TYN +I G+CKEG +D A + + 
Sbjct: 229 VITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVR 288

Query: 360 HMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFLCRKG 419
           ++   GC+P+VI++NI+LR++ + G+W + EKL+ +M  + C P+VVT++ILI  LCR G
Sbjct: 289 NLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG 348

Query: 420 LLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYN 479
            +  A+++L+ M + G TP++ SY+PL+  FC+E ++D AIE+L+ M+S GC PDIV YN
Sbjct: 349 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYN 408

Query: 480 TLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIKLLDEMKGK 539
           T+L  LCK+GK D A+EI  +LG  GCSP   +YNT+   L   G    A+ ++ EM   
Sbjct: 409 TVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN 468

Query: 540 GLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRA 599
           G+ PD ITY+S++  L REG VDEA     D+      P+ +TYN ++LG CKA +   A
Sbjct: 469 GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDA 528

Query: 600 IDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQV 648
           I+ L  MVG GC+P E +Y +LIEG+ + G   EA+EL N+L     + + S +++
Sbjct: 529 INVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRL 583

BLAST of Lsi08G010400 vs. ExPASy Swiss-Prot
Match: A3KPF8 (Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g79080 PE=2 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.5e-94
Identity = 188/486 (38.68%), Postives = 289/486 (59.47%), Query Frame = 0

Query: 171 LEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVPDVITYNV 230
           L + F  LE +V  G  P++   T L+  LCK  + +KA RV+E++  SG +PD   Y  
Sbjct: 87  LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146

Query: 231 LISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRE 290
           L++  CK G +G A+QL+++M       + VTYN ++R LC  G L Q+++ ++R +Q+ 
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206

Query: 291 CYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAI 350
             P+  TY+ L+EA  KE G  +A+KLLDE+  KG +P++V+YNVL+ G CKEGR D+A+
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266

Query: 351 KFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFL 410
                +P+ G + NV+++NI+LR +C  GRW +A  LLAEM     +PSVVT+NILIN L
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 326

Query: 411 CRKGLLGRAIDVLEKMPQ--HGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 470
              G   +A+ VL++M +  H     + SYNP++   CKE K+D  ++ LD M+ R C P
Sbjct: 327 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKP 386

Query: 471 DIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIKLL 530
           +  TYN + +    + KV  A  I+  L +K        Y +VI  L + G T  A +LL
Sbjct: 387 NEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLL 446

Query: 531 DEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEM-GVKPNAITYNSIMLGLCK 590
            EM   G  PD  TYS+L+ GL  EG    A+     +EE    KP    +N+++LGLCK
Sbjct: 447 YEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCK 506

Query: 591 ARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSA 650
            R+T  A++    MV +   P E +Y IL+EG+A+E   + A E+L+EL  R V+ +++ 
Sbjct: 507 IRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAV 566

BLAST of Lsi08G010400 vs. ExPASy Swiss-Prot
Match: Q9FRS4 (Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana OX=3702 GN=At1g08610 PE=2 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 5.5e-92
Identity = 187/506 (36.96%), Postives = 279/506 (55.14%), Query Frame = 0

Query: 131 NLHTHLNGSSSSSSSSSNHSQSFEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDI 190
           NL   +        SS       +E  NN  L  L  NG+L +  K +E M     +P  
Sbjct: 80  NLRARVKPMKQFGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHF 139

Query: 191 IACTSLIRGLCKTGKTRKATRVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDR 250
            +C++L+RGL +  +  KA  ++ ++  SG VPD ITYN++I   CK G I +AL LL+ 
Sbjct: 140 PSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLED 199

Query: 251 MSVS---PDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESG 310
           MS+S   PDV+TYNT++R + D G  +QA+     QLQ  C P +ITYT+L+E  C+  G
Sbjct: 200 MSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCG 259

Query: 311 VGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNI 370
             +A+++L++M  +GC PD+VTYN L+N  C+ G L+E    + H+ S+G + N +T+N 
Sbjct: 260 SARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNT 319

Query: 371 ILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHG 430
           +L S+CS   W + E++L  M +    P+V+T+NILIN LC+  LL RAID   +     
Sbjct: 320 LLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQ----- 379

Query: 431 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 490
                                         M+ + C PDIVTYNT+L A+ K+G VD A+
Sbjct: 380 ------------------------------MLEQKCLPDIVTYNTVLGAMSKEGMVDDAI 439

Query: 491 EILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGL 550
           E+L  L +  C P LITYN+VIDGL+K G  + A++L  +M   G+ PD IT  SL+ G 
Sbjct: 440 ELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGF 499

Query: 551 SREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVGRGCKPTE 610
            R   V+EA     +    G      TY  ++ GLCK ++   AI+ +  M+  GCKP E
Sbjct: 500 CRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDE 550

Query: 611 ASYMILIEGLAYEGLAKEALELLNEL 634
             Y  +++G+   G+  EA++L  +L
Sbjct: 560 TIYTAIVKGVEEMGMGSEAVQLQKKL 550

BLAST of Lsi08G010400 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 6.7e-90
Identity = 167/488 (34.22%), Postives = 276/488 (56.56%), Query Frame = 0

Query: 166 VRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATR-VMEILEDSGAVPD 225
           +  G+L+   +  E MV  G     ++   ++ G CK G+   A   + E+    G  PD
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294

Query: 226 VITYNVLISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLD 285
             T+N L++G CK+G +  A++++D M      PDV TYN+++  LC  G++K+A+EVLD
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354

Query: 286 RQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 345
           + + R+C P+ +TY  LI   CKE+ V +A +L   +  KG  PDV T+N LI G+C   
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414

Query: 346 RLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFN 405
               A++    M S GC+P+  T+N+++ S+CS G+  +A  +L +M   GC+ SV+T+N
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474

Query: 406 ILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 465
            LI+  C+      A ++ ++M  HG + NS++YN L+ G CK ++++ A + +D M+  
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534

Query: 466 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDA 525
           G  PD  TYN+LLT  C+ G +  A +I+  + S GC P ++TY T+I GL K G+ E A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594

Query: 526 IKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHD-LEEMGVKPNAITYNSIML 585
            KLL  ++ KG+      Y+ ++ GL R+ K  EAI  F + LE+    P+A++Y  +  
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654

Query: 586 GLCKARQTVR-AIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVV 645
           GLC     +R A+DFL  ++ +G  P  +S  +L EGL    + +  ++L+N +  +   
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARF 714

Query: 646 KKSSAEQV 648
            +     V
Sbjct: 715 SEEEVSMV 722

BLAST of Lsi08G010400 vs. ExPASy TrEMBL
Match: A0A5A7VFH1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004060 PE=4 SV=1)

HSP 1 Score: 1171.4 bits (3029), Expect = 0.0e+00
Identity = 582/610 (95.41%), Postives = 597/610 (97.87%), Query Frame = 0

Query: 44  MDVTLPAKHYTDGFCLFHRHSTKNRGQKVRAKGRVSPETNSLRLYVGEKGKPRFLVIPSD 103
           MD+TLPAKHYTDGFCLFHRH+TKNR ++V AKGRVS ETNSLRL+VGEKGK RF VIPS 
Sbjct: 1   MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPSY 60

Query: 104 GPEEQLVRAVPRVDTFNSNGRLQHGEKNLHTHLNGSSSSSSSSSNHSQSFEEFENNNHLR 163
           G +EQLVRAVPRVDTF+SNGRL HGEKNLHTHLNGSSSSSSSSSN+SQS EEFENNNHLR
Sbjct: 61  GSDEQLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYSQSSEEFENNNHLR 120

Query: 164 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 223
           RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP
Sbjct: 121 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 180

Query: 224 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 283
           DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ
Sbjct: 181 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 240

Query: 284 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 343
           LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL
Sbjct: 241 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 300

Query: 344 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL 403
           DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEM+RKGCSPSVVTFNIL
Sbjct: 301 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIRKGCSPSVVTFNIL 360

Query: 404 INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 463
           INFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC
Sbjct: 361 INFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 420

Query: 464 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIK 523
           YPDIVTYNTLLTALCKDGKVD+AVEILNQLGSKGCSPVLITYNTVIDGLSKVGKT DAIK
Sbjct: 421 YPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTGDAIK 480

Query: 524 LLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLC 583
           LLDEMKGKGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGV+PNAITYNSIMLGLC
Sbjct: 481 LLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC 540

Query: 584 KARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSS 643
           KARQTVRAIDFLAYMV RGCKPTEASYMILIEGLAYEGL KEALELL+EL SRGVV+KSS
Sbjct: 541 KARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELLDELYSRGVVRKSS 600

Query: 644 AEQVVVKNTF 654
           AEQVVVKNTF
Sbjct: 601 AEQVVVKNTF 610

BLAST of Lsi08G010400 vs. ExPASy TrEMBL
Match: A0A1S3BB35 (pentatricopeptide repeat-containing protein At1g09900 OS=Cucumis melo OX=3656 GN=LOC103488143 PE=4 SV=1)

HSP 1 Score: 1171.4 bits (3029), Expect = 0.0e+00
Identity = 582/610 (95.41%), Postives = 597/610 (97.87%), Query Frame = 0

Query: 44  MDVTLPAKHYTDGFCLFHRHSTKNRGQKVRAKGRVSPETNSLRLYVGEKGKPRFLVIPSD 103
           MD+TLPAKHYTDGFCLFHRH+TKNR ++V AKGRVS ETNSLRL+VGEKGK RF VIPS 
Sbjct: 1   MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPSY 60

Query: 104 GPEEQLVRAVPRVDTFNSNGRLQHGEKNLHTHLNGSSSSSSSSSNHSQSFEEFENNNHLR 163
           G +EQLVRAVPRVDTF+SNGRL HGEKNLHTHLNGSSSSSSSSSN+SQS EEFENNNHLR
Sbjct: 61  GSDEQLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYSQSSEEFENNNHLR 120

Query: 164 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 223
           RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP
Sbjct: 121 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 180

Query: 224 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 283
           DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ
Sbjct: 181 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 240

Query: 284 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 343
           LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL
Sbjct: 241 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 300

Query: 344 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL 403
           DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEM+RKGCSPSVVTFNIL
Sbjct: 301 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIRKGCSPSVVTFNIL 360

Query: 404 INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 463
           INFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC
Sbjct: 361 INFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 420

Query: 464 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIK 523
           YPDIVTYNTLLTALCKDGKVD+AVEILNQLGSKGCSPVLITYNTVIDGLSKVGKT DAIK
Sbjct: 421 YPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTGDAIK 480

Query: 524 LLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLC 583
           LLDEMKGKGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGV+PNAITYNSIMLGLC
Sbjct: 481 LLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC 540

Query: 584 KARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSS 643
           KARQTVRAIDFLAYMV RGCKPTEASYMILIEGLAYEGL KEALELL+EL SRGVV+KSS
Sbjct: 541 KARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELLDELYSRGVVRKSS 600

Query: 644 AEQVVVKNTF 654
           AEQVVVKNTF
Sbjct: 601 AEQVVVKNTF 610

BLAST of Lsi08G010400 vs. ExPASy TrEMBL
Match: A0A6J1BSC2 (pentatricopeptide repeat-containing protein At1g09900 OS=Momordica charantia OX=3673 GN=LOC111005101 PE=4 SV=1)

HSP 1 Score: 1129.4 bits (2920), Expect = 0.0e+00
Identity = 570/623 (91.49%), Postives = 589/623 (94.54%), Query Frame = 0

Query: 44  MDVTLPAKHYTDGFCLFHRHSTKNRGQKVRAKGRVSPETNSLRLYVGEKGKPRFLVI-PS 103
           MDVTLPAKHYTDGFCLF R ST+NRG+KVRA GRV+ E NSLRLYVG KGK RFLV+ PS
Sbjct: 1   MDVTLPAKHYTDGFCLFQRQSTRNRGRKVRAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60

Query: 104 D------------GPEEQLVRAVPRVDTFNSNGRLQHGEKNLHTHLNGSSSSSSSSSNHS 163
           D              +  +VRA+ RVDTF+SNGRLQHGEKNLH HLNG S+SSSS+SNHS
Sbjct: 61  DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNG-SNSSSSASNHS 120

Query: 164 QSFEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKAT 223
           QSFEEFENNNHLRRLVRNGELEEGFKF+E+MV  GDIPDIIACTSLIRGLCKTGKTRKAT
Sbjct: 121 QSFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKAT 180

Query: 224 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 283
           RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS
Sbjct: 181 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240

Query: 284 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 343
           GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEM++KGCKPDVVT+
Sbjct: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTF 300

Query: 344 NVLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 403
           NVLINGICKEGRLDEAIKFLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR
Sbjct: 301 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 360

Query: 404 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 463
           KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR
Sbjct: 361 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420

Query: 464 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVID 523
           AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL +KGCSPVLITYNTVID
Sbjct: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVID 480

Query: 524 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKP 583
           GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLV GLSREGKVDEAIAFFHDLEEMGV+P
Sbjct: 481 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVRGLSREGKVDEAIAFFHDLEEMGVRP 540

Query: 584 NAITYNSIMLGLCKARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELL 643
           NAITYNSIMLGLCK RQT RAIDFLAYMV RGCKPTEASYMILIEGLAYEGLAKEALELL
Sbjct: 541 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELL 600

Query: 644 NELCSRGVVKKSSAEQVVVKNTF 654
           NELCSRGVVKKSSAEQVVVKN+F
Sbjct: 601 NELCSRGVVKKSSAEQVVVKNSF 622

BLAST of Lsi08G010400 vs. ExPASy TrEMBL
Match: A0A6J1HFE3 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata OX=3662 GN=LOC111462544 PE=4 SV=1)

HSP 1 Score: 1072.8 bits (2773), Expect = 4.9e-310
Identity = 534/610 (87.54%), Postives = 564/610 (92.46%), Query Frame = 0

Query: 44  MDVTLPAKHYTDGFCLFHRHSTKNRGQKVRAKGRVSPETNSLRLYVGEKGKPRFLVIPSD 103
           MD+TL AKHYTDGFCLF R STKNRG+ VRA+ R +PETNS+  +VG KGKPRFLV+PSD
Sbjct: 1   MDITLHAKHYTDGFCLFQRRSTKNRGRNVRAERRATPETNSVSFFVGGKGKPRFLVVPSD 60

Query: 104 GPEEQLVRAVPRVDTFNSNGRLQHGEKNLHTHLNGSSSSSSSSSNHSQSFEEFENNNHLR 163
             EE  VRAV +  +       Q GEKN+HTHLNG SSSSS SSNHSQSFEEFENNNHLR
Sbjct: 61  CSEESFVRAVLKNPS-------QQGEKNVHTHLNG-SSSSSFSSNHSQSFEEFENNNHLR 120

Query: 164 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 223
           RLVRNGELEEGFKF+E MVYRGDIPD I CTSLIRGLCKTGKTRKA RVMEILEDSGAVP
Sbjct: 121 RLVRNGELEEGFKFIEGMVYRGDIPDAIVCTSLIRGLCKTGKTRKAARVMEILEDSGAVP 180

Query: 224 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 283
           DVITYNVLISGYCKSGEI +AL+LLDRMS+SPDV+TYN ILRTLCDSGKLK+AMEVL RQ
Sbjct: 181 DVITYNVLISGYCKSGEIDNALKLLDRMSISPDVITYNIILRTLCDSGKLKEAMEVLHRQ 240

Query: 284 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 343
           LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMR+KGCKPDVVTYNVLINGICKEGRL
Sbjct: 241 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMREKGCKPDVVTYNVLINGICKEGRL 300

Query: 344 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL 403
           DEAI+FLN M SYGCQPNVITHNIILRSMCSTGRW DAEKLLAEMVRKGCSPSVVTFNIL
Sbjct: 301 DEAIEFLNEMSSYGCQPNVITHNIILRSMCSTGRWTDAEKLLAEMVRKGCSPSVVTFNIL 360

Query: 404 INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 463
           INFLCRKGLLGRAID+LEKMPQHGCTPNS SYNPLLHGFCKEKKM+RAIEYLDIM SRGC
Sbjct: 361 INFLCRKGLLGRAIDILEKMPQHGCTPNSSSYNPLLHGFCKEKKMERAIEYLDIMASRGC 420

Query: 464 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIK 523
           YPDIVTYNTLLTALCKDGKVDVAVEILNQLG+KGCSPVLITYNTVIDGLSK GKTEDA+K
Sbjct: 421 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGTKGCSPVLITYNTVIDGLSKAGKTEDAVK 480

Query: 524 LLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLC 583
           LLDEMK KGLKPDIITYSSLVGGL REGKVDEAIAFFHDLEE+GV+PN ITYNSIMLGLC
Sbjct: 481 LLDEMKEKGLKPDIITYSSLVGGLCREGKVDEAIAFFHDLEEVGVRPNVITYNSIMLGLC 540

Query: 584 KARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSS 643
           K +QTVRAIDFLA MV RGCKP EASYMILIEGLAYEGLAKEALELL+ELCSRGV+KKSS
Sbjct: 541 KVQQTVRAIDFLASMVARGCKPNEASYMILIEGLAYEGLAKEALELLDELCSRGVMKKSS 600

Query: 644 AEQVVVKNTF 654
           AE+VV+KN+F
Sbjct: 601 AERVVIKNSF 602

BLAST of Lsi08G010400 vs. ExPASy TrEMBL
Match: A0A6J1K404 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita maxima OX=3661 GN=LOC111492114 PE=4 SV=1)

HSP 1 Score: 1066.6 bits (2757), Expect = 4.1e-308
Identity = 533/610 (87.38%), Postives = 560/610 (91.80%), Query Frame = 0

Query: 44  MDVTLPAKHYTDGFCLFHRHSTKNRGQKVRAKGRVSPETNSLRLYVGEKGKPRFLVIPSD 103
           MD+TL AKHYTDGFCLF R STKN  + VRA+ R +PETNS+   VG KGKPRFLVIPSD
Sbjct: 1   MDITLHAKHYTDGFCLFQRRSTKNSSRNVRAERRATPETNSVSFSVGGKGKPRFLVIPSD 60

Query: 104 GPEEQLVRAVPRVDTFNSNGRLQHGEKNLHTHLNGSSSSSSSSSNHSQSFEEFENNNHLR 163
             EE  VRAV +         LQ GEKNLHTHLNG SSSSS SSNHSQSFEEFENNNHLR
Sbjct: 61  CSEESFVRAVLK-------NPLQQGEKNLHTHLNG-SSSSSFSSNHSQSFEEFENNNHLR 120

Query: 164 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 223
           RLVRNGELEEGFKF+E MVYRGDIPD I CTSLIRGLCKTGKTRKA RVMEILEDSGAVP
Sbjct: 121 RLVRNGELEEGFKFIEGMVYRGDIPDAIVCTSLIRGLCKTGKTRKAARVMEILEDSGAVP 180

Query: 224 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 283
           DVITYNVLISGYCKSGEI +AL+LLDRMS+SPDV+TYN ILRTLCDSGKLK+AMEVL RQ
Sbjct: 181 DVITYNVLISGYCKSGEIDNALKLLDRMSISPDVITYNIILRTLCDSGKLKEAMEVLHRQ 240

Query: 284 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 343
           LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMR+KGCKPDVVTYNVLINGICKEGRL
Sbjct: 241 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMREKGCKPDVVTYNVLINGICKEGRL 300

Query: 344 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL 403
           DEAI+FLN M SYGCQPNVITHNIILRSMCSTGRW DAEKLLAEMVRKGCSPSVVTFNIL
Sbjct: 301 DEAIEFLNEMSSYGCQPNVITHNIILRSMCSTGRWTDAEKLLAEMVRKGCSPSVVTFNIL 360

Query: 404 INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 463
           INFLCRKGLLGRAID+LEKMPQHGCTPNS SYNPLLHGFCKEKKM+RAIEYLDIM SRGC
Sbjct: 361 INFLCRKGLLGRAIDILEKMPQHGCTPNSSSYNPLLHGFCKEKKMERAIEYLDIMASRGC 420

Query: 464 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIK 523
           YPDIVTYNTLLTALCKDGKVDVAVEILNQLG+K CSPVLITYNTVIDGLSK GKTEDA+K
Sbjct: 421 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGTKSCSPVLITYNTVIDGLSKAGKTEDAVK 480

Query: 524 LLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLC 583
           LLDEMK KGLKPDIITYSSL+GGL REGKVDEAIAFFHDLEE+GV+PN ITYNSIMLGLC
Sbjct: 481 LLDEMKEKGLKPDIITYSSLIGGLCREGKVDEAIAFFHDLEEVGVRPNVITYNSIMLGLC 540

Query: 584 KARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSS 643
           K +QTVRAIDFLA MV RGCKP EASYMILIEGLAYEGLAKEALELL+ELCSRGV+KKSS
Sbjct: 541 KVQQTVRAIDFLASMVARGCKPNEASYMILIEGLAYEGLAKEALELLDELCSRGVMKKSS 600

Query: 644 AEQVVVKNTF 654
           AE+VV+KN+F
Sbjct: 601 AERVVIKNSF 602

BLAST of Lsi08G010400 vs. NCBI nr
Match: XP_038886112.1 (pentatricopeptide repeat-containing protein At1g09900 [Benincasa hispida])

HSP 1 Score: 1194.9 bits (3090), Expect = 0.0e+00
Identity = 595/610 (97.54%), Postives = 601/610 (98.52%), Query Frame = 0

Query: 44  MDVTLPAKHYTDGFCLFHRHSTKNRGQKVRAKGRVSPETNSLRLYVGEKGKPRFLVIPSD 103
           MD+TLPAKHYTDGFCLFHR  +KNRG+KVRAKGRVS ETNSLRLYVGEKGKPRFLVIPSD
Sbjct: 1   MDITLPAKHYTDGFCLFHRRPSKNRGRKVRAKGRVSSETNSLRLYVGEKGKPRFLVIPSD 60

Query: 104 GPEEQLVRAVPRVDTFNSNGRLQHGEKNLHTHLNGSSSSSSSSSNHSQSFEEFENNNHLR 163
             EE LVRAVPRVDTF+SNGRLQ GEKNLHTHLNGSSSSSSSSSNHSQSFEEFENNNHLR
Sbjct: 61  CSEEPLVRAVPRVDTFSSNGRLQQGEKNLHTHLNGSSSSSSSSSNHSQSFEEFENNNHLR 120

Query: 164 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 223
           RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP
Sbjct: 121 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 180

Query: 224 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 283
           DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ
Sbjct: 181 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 240

Query: 284 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 343
           LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL
Sbjct: 241 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 300

Query: 344 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL 403
           DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL
Sbjct: 301 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL 360

Query: 404 INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 463
           INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC
Sbjct: 361 INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 420

Query: 464 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIK 523
           YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIK
Sbjct: 421 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIK 480

Query: 524 LLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLC 583
           LLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGV+PNAITYNSIMLGLC
Sbjct: 481 LLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC 540

Query: 584 KARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSS 643
           K RQTVRAIDFLAYMV +GCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSS
Sbjct: 541 KVRQTVRAIDFLAYMVAKGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSS 600

Query: 644 AEQVVVKNTF 654
           AEQVVVKNTF
Sbjct: 601 AEQVVVKNTF 610

BLAST of Lsi08G010400 vs. NCBI nr
Match: XP_008444958.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g09900 [Cucumis melo] >KAA0065076.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1171.4 bits (3029), Expect = 0.0e+00
Identity = 582/610 (95.41%), Postives = 597/610 (97.87%), Query Frame = 0

Query: 44  MDVTLPAKHYTDGFCLFHRHSTKNRGQKVRAKGRVSPETNSLRLYVGEKGKPRFLVIPSD 103
           MD+TLPAKHYTDGFCLFHRH+TKNR ++V AKGRVS ETNSLRL+VGEKGK RF VIPS 
Sbjct: 1   MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPSY 60

Query: 104 GPEEQLVRAVPRVDTFNSNGRLQHGEKNLHTHLNGSSSSSSSSSNHSQSFEEFENNNHLR 163
           G +EQLVRAVPRVDTF+SNGRL HGEKNLHTHLNGSSSSSSSSSN+SQS EEFENNNHLR
Sbjct: 61  GSDEQLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYSQSSEEFENNNHLR 120

Query: 164 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 223
           RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP
Sbjct: 121 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 180

Query: 224 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 283
           DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ
Sbjct: 181 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 240

Query: 284 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 343
           LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL
Sbjct: 241 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 300

Query: 344 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL 403
           DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEM+RKGCSPSVVTFNIL
Sbjct: 301 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIRKGCSPSVVTFNIL 360

Query: 404 INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 463
           INFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC
Sbjct: 361 INFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 420

Query: 464 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIK 523
           YPDIVTYNTLLTALCKDGKVD+AVEILNQLGSKGCSPVLITYNTVIDGLSKVGKT DAIK
Sbjct: 421 YPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTGDAIK 480

Query: 524 LLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLC 583
           LLDEMKGKGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGV+PNAITYNSIMLGLC
Sbjct: 481 LLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC 540

Query: 584 KARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSS 643
           KARQTVRAIDFLAYMV RGCKPTEASYMILIEGLAYEGL KEALELL+EL SRGVV+KSS
Sbjct: 541 KARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELLDELYSRGVVRKSS 600

Query: 644 AEQVVVKNTF 654
           AEQVVVKNTF
Sbjct: 601 AEQVVVKNTF 610

BLAST of Lsi08G010400 vs. NCBI nr
Match: XP_011649703.1 (pentatricopeptide repeat-containing protein At1g09900 [Cucumis sativus] >KAE8652149.1 hypothetical protein Csa_022252 [Cucumis sativus])

HSP 1 Score: 1151.7 bits (2978), Expect = 0.0e+00
Identity = 573/610 (93.93%), Postives = 589/610 (96.56%), Query Frame = 0

Query: 44  MDVTLPAKHYTDGFCLFHRHSTKNRGQKVRAKGRVSPETNSLRLYVGEKGKPRFLVIPSD 103
           MD+TLPAKHYTDGFCLFHRH+ KNR ++V AKGRVS ETNSLRL+ GEKG  RF VIPS 
Sbjct: 1   MDLTLPAKHYTDGFCLFHRHTAKNRDRRVMAKGRVSSETNSLRLHAGEKG--RFFVIPSY 60

Query: 104 GPEEQLVRAVPRVDTFNSNGRLQHGEKNLHTHLNGSSSSSSSSSNHSQSFEEFENNNHLR 163
           G EEQLVRAVPRVDTF+SNGRL HGEKNLHTHLNGSSSSSSS SNHSQS EE ENNNHLR
Sbjct: 61  GSEEQLVRAVPRVDTFSSNGRLSHGEKNLHTHLNGSSSSSSSYSNHSQSSEEVENNNHLR 120

Query: 164 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 223
           RLVRNGELEEGFKFLEDMV RGDIPDIIACTSLIRGLCKTGKT KATRVMEILEDSGAVP
Sbjct: 121 RLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVP 180

Query: 224 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 283
           DVITYNVLISGYCK+GEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK+AMEVLDRQ
Sbjct: 181 DVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQ 240

Query: 284 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 343
           +QRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL
Sbjct: 241 MQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 300

Query: 344 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL 403
           DEAI+FLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEK LAEM+RKGCSPSVVTFNIL
Sbjct: 301 DEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNIL 360

Query: 404 INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 463
           INFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLH  CK+KKM+RAIEYLDIMVSRGC
Sbjct: 361 INFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGC 420

Query: 464 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIK 523
           YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKT+DAIK
Sbjct: 421 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIK 480

Query: 524 LLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLC 583
           LLDEMKGKGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLC
Sbjct: 481 LLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLC 540

Query: 584 KARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSS 643
           KARQTVRAIDFLAYMV RGCKPTE SYMILIEGLAYEGLAKEALELLNELCSRGVVKKSS
Sbjct: 541 KARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSS 600

Query: 644 AEQVVVKNTF 654
           AEQVVVKNTF
Sbjct: 601 AEQVVVKNTF 608

BLAST of Lsi08G010400 vs. NCBI nr
Match: XP_022132179.1 (pentatricopeptide repeat-containing protein At1g09900 [Momordica charantia])

HSP 1 Score: 1129.4 bits (2920), Expect = 0.0e+00
Identity = 570/623 (91.49%), Postives = 589/623 (94.54%), Query Frame = 0

Query: 44  MDVTLPAKHYTDGFCLFHRHSTKNRGQKVRAKGRVSPETNSLRLYVGEKGKPRFLVI-PS 103
           MDVTLPAKHYTDGFCLF R ST+NRG+KVRA GRV+ E NSLRLYVG KGK RFLV+ PS
Sbjct: 1   MDVTLPAKHYTDGFCLFQRQSTRNRGRKVRAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60

Query: 104 D------------GPEEQLVRAVPRVDTFNSNGRLQHGEKNLHTHLNGSSSSSSSSSNHS 163
           D              +  +VRA+ RVDTF+SNGRLQHGEKNLH HLNG S+SSSS+SNHS
Sbjct: 61  DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNG-SNSSSSASNHS 120

Query: 164 QSFEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKAT 223
           QSFEEFENNNHLRRLVRNGELEEGFKF+E+MV  GDIPDIIACTSLIRGLCKTGKTRKAT
Sbjct: 121 QSFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKAT 180

Query: 224 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 283
           RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS
Sbjct: 181 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240

Query: 284 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 343
           GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEM++KGCKPDVVT+
Sbjct: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTF 300

Query: 344 NVLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 403
           NVLINGICKEGRLDEAIKFLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR
Sbjct: 301 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 360

Query: 404 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 463
           KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR
Sbjct: 361 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420

Query: 464 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVID 523
           AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL +KGCSPVLITYNTVID
Sbjct: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVID 480

Query: 524 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKP 583
           GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLV GLSREGKVDEAIAFFHDLEEMGV+P
Sbjct: 481 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVRGLSREGKVDEAIAFFHDLEEMGVRP 540

Query: 584 NAITYNSIMLGLCKARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELL 643
           NAITYNSIMLGLCK RQT RAIDFLAYMV RGCKPTEASYMILIEGLAYEGLAKEALELL
Sbjct: 541 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELL 600

Query: 644 NELCSRGVVKKSSAEQVVVKNTF 654
           NELCSRGVVKKSSAEQVVVKN+F
Sbjct: 601 NELCSRGVVKKSSAEQVVVKNSF 622

BLAST of Lsi08G010400 vs. NCBI nr
Match: KAG6598746.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1075.1 bits (2779), Expect = 0.0e+00
Identity = 535/611 (87.56%), Postives = 566/611 (92.64%), Query Frame = 0

Query: 43  TMDVTLPAKHYTDGFCLFHRHSTKNRGQKVRAKGRVSPETNSLRLYVGEKGKPRFLVIPS 102
           +MD+TL AKHYTDGFCLF R STKNRG+KVRA+ R +PETNS+  +VG KGKPRFLV+PS
Sbjct: 184 SMDITLHAKHYTDGFCLFQRRSTKNRGRKVRAERRATPETNSVSFFVGGKGKPRFLVVPS 243

Query: 103 DGPEEQLVRAVPRVDTFNSNGRLQHGEKNLHTHLNGSSSSSSSSSNHSQSFEEFENNNHL 162
           D  EE  VRAV +  +       Q GEKN+HTHLNG SSSSS SSNHSQSFEEFENNNHL
Sbjct: 244 DCSEESFVRAVLKNPS-------QQGEKNVHTHLNG-SSSSSFSSNHSQSFEEFENNNHL 303

Query: 163 RRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAV 222
           RRLVRNGELEEGFKF+E MVYRGDIPD I CTSLIRGLCKTGKTRKA RVMEILEDSGAV
Sbjct: 304 RRLVRNGELEEGFKFIEGMVYRGDIPDAIVCTSLIRGLCKTGKTRKAARVMEILEDSGAV 363

Query: 223 PDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDR 282
           PDVITYNVLISGYCKSGEI +AL+LLDRMS+SPDV+TYN ILRTLCDSGKLK+AMEVL R
Sbjct: 364 PDVITYNVLISGYCKSGEIDNALKLLDRMSISPDVITYNIILRTLCDSGKLKEAMEVLHR 423

Query: 283 QLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGR 342
           QLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMR+KGCKPDVVTYNVLINGICKEGR
Sbjct: 424 QLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMREKGCKPDVVTYNVLINGICKEGR 483

Query: 343 LDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNI 402
           LDEAI+FLN M SYGCQPNVITHNIILRSMCSTGRW DAEKLLAEMVRKGCSPSVVTFNI
Sbjct: 484 LDEAIEFLNEMSSYGCQPNVITHNIILRSMCSTGRWTDAEKLLAEMVRKGCSPSVVTFNI 543

Query: 403 LINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG 462
           LINFLCRKGLLGRAID+LEKMPQHGCTPNS SYNPLLHGFCKEKKM+RAIEYLDIM SRG
Sbjct: 544 LINFLCRKGLLGRAIDILEKMPQHGCTPNSSSYNPLLHGFCKEKKMERAIEYLDIMASRG 603

Query: 463 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAI 522
           CYPDIVTYNTLLTALCKDGKVDVAVEILNQLG+KGCSPVLITYNTVIDGLSK GKTEDA+
Sbjct: 604 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLGTKGCSPVLITYNTVIDGLSKAGKTEDAV 663

Query: 523 KLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGL 582
           KLLDEMK KGLKPDIITYSSLVGGL REGKVDEAIAFFHDLEE+GV+PN ITYNSIMLGL
Sbjct: 664 KLLDEMKEKGLKPDIITYSSLVGGLCREGKVDEAIAFFHDLEEVGVRPNVITYNSIMLGL 723

Query: 583 CKARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKS 642
           CK +QTVRAIDFLA MV RGCKP EASYMILIEGLAYEGLAKEALELL+ELCSRGV+KKS
Sbjct: 724 CKVQQTVRAIDFLASMVARGCKPNEASYMILIEGLAYEGLAKEALELLDELCSRGVMKKS 783

Query: 643 SAEQVVVKNTF 654
           SAE+VV+KN+F
Sbjct: 784 SAERVVIKNSF 786

BLAST of Lsi08G010400 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 893.3 bits (2307), Expect = 1.2e-259
Identity = 446/608 (73.36%), Postives = 508/608 (83.55%), Query Frame = 0

Query: 44  MDVTLPAKHYTDGFCLFHR-HSTKNRGQKVRAKGRVSPETNSLRLYVGEKGKPRFLVIPS 103
           MD+ +      +GFCL  + H    RG K+    R S   +S ++ +G + + R +    
Sbjct: 1   MDLMVSTSSAQEGFCLIQQFHREYKRGNKLDVSCRTSGSISS-KIPLGSRKRNRLV---- 60

Query: 104 DGPEEQLVRAVPRVDTFNSNGRLQHGEKNLHTHLNGSSSSSSSSSNHSQSFEEFENNNHL 163
                 LV A  +V++   NGR Q  E     + N + +   SS N S + E+ E+NNHL
Sbjct: 61  ------LVSAASKVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHL 120

Query: 164 RRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAV 223
           R++VR GELEEGFKFLE+MVY G++PDII CT+LIRG C+ GKTRKA +++EILE SGAV
Sbjct: 121 RQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAV 180

Query: 224 PDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDR 283
           PDVITYNV+ISGYCK+GEI +AL +LDRMSVSPDVVTYNTILR+LCDSGKLKQAMEVLDR
Sbjct: 181 PDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 240

Query: 284 QLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGR 343
            LQR+CYPDVITYTILIEATC++SGVG AMKLLDEMRD+GC PDVVTYNVL+NGICKEGR
Sbjct: 241 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 300

Query: 344 LDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNI 403
           LDEAIKFLN MPS GCQPNVITHNIILRSMCSTGRWMDAEKLLA+M+RKG SPSVVTFNI
Sbjct: 301 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 360

Query: 404 LINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG 463
           LINFLCRKGLLGRAID+LEKMPQHGC PNSLSYNPLLHGFCKEKKMDRAIEYL+ MVSRG
Sbjct: 361 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 420

Query: 464 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAI 523
           CYPDIVTYNT+LTALCKDGKV+ AVEILNQL SKGCSPVLITYNTVIDGL+K GKT  AI
Sbjct: 421 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 480

Query: 524 KLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGL 583
           KLLDEM+ K LKPD ITYSSLVGGLSREGKVDEAI FFH+ E MG++PNA+T+NSIMLGL
Sbjct: 481 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 540

Query: 584 CKARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKS 643
           CK+RQT RAIDFL +M+ RGCKP E SY ILIEGLAYEG+AKEALELLNELC++G++KKS
Sbjct: 541 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKS 597

Query: 644 SAEQVVVK 651
           SAEQV  K
Sbjct: 601 SAEQVAGK 597

BLAST of Lsi08G010400 vs. TAIR 10
Match: AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 456.1 bits (1172), Expect = 4.9e-128
Identity = 237/536 (44.22%), Postives = 334/536 (62.31%), Query Frame = 0

Query: 120 NSNGR--LQHGEKNLHTHLNGSSS-SSSSSSNHSQS--FEEFENNNHLRRLVRNGELEEG 179
           N NGR     G +NL T     ++  +     HSQS  F + +      R  R+G   E 
Sbjct: 49  NDNGRSFSSSGARNLQTTTTTDATLPTERRQQHSQSLGFRDTQMLKIFHRSCRSGNYIES 108

Query: 180 FKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVPDVITYNVLISG 239
              LE MV +G  PD+I CT LI+G        KA RVMEILE  G  PDV  YN LI+G
Sbjct: 109 LHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVFAYNALING 168

Query: 240 YCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRECYPD 299
           +CK   I  A ++LDRM     SPD VTYN ++ +LC  GKL  A++VL++ L   C P 
Sbjct: 169 FCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPT 228

Query: 300 VITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIKFLN 359
           VITYTILIEAT  E GV +A+KL+DEM  +G KPD+ TYN +I G+CKEG +D A + + 
Sbjct: 229 VITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVR 288

Query: 360 HMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFLCRKG 419
           ++   GC+P+VI++NI+LR++ + G+W + EKL+ +M  + C P+VVT++ILI  LCR G
Sbjct: 289 NLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG 348

Query: 420 LLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYN 479
            +  A+++L+ M + G TP++ SY+PL+  FC+E ++D AIE+L+ M+S GC PDIV YN
Sbjct: 349 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYN 408

Query: 480 TLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIKLLDEMKGK 539
           T+L  LCK+GK D A+EI  +LG  GCSP   +YNT+   L   G    A+ ++ EM   
Sbjct: 409 TVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN 468

Query: 540 GLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRA 599
           G+ PD ITY+S++  L REG VDEA     D+      P+ +TYN ++LG CKA +   A
Sbjct: 469 GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDA 528

Query: 600 IDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQV 648
           I+ L  MVG GC+P E +Y +LIEG+ + G   EA+EL N+L     + + S +++
Sbjct: 529 INVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRL 583

BLAST of Lsi08G010400 vs. TAIR 10
Match: AT1G79080.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 348.6 bits (893), Expect = 1.1e-95
Identity = 188/486 (38.68%), Postives = 289/486 (59.47%), Query Frame = 0

Query: 171 LEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVPDVITYNV 230
           L + F  LE +V  G  P++   T L+  LCK  + +KA RV+E++  SG +PD   Y  
Sbjct: 87  LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146

Query: 231 LISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRE 290
           L++  CK G +G A+QL+++M       + VTYN ++R LC  G L Q+++ ++R +Q+ 
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206

Query: 291 CYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAI 350
             P+  TY+ L+EA  KE G  +A+KLLDE+  KG +P++V+YNVL+ G CKEGR D+A+
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266

Query: 351 KFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFL 410
                +P+ G + NV+++NI+LR +C  GRW +A  LLAEM     +PSVVT+NILIN L
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 326

Query: 411 CRKGLLGRAIDVLEKMPQ--HGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 470
              G   +A+ VL++M +  H     + SYNP++   CKE K+D  ++ LD M+ R C P
Sbjct: 327 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKP 386

Query: 471 DIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIKLL 530
           +  TYN + +    + KV  A  I+  L +K        Y +VI  L + G T  A +LL
Sbjct: 387 NEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLL 446

Query: 531 DEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEM-GVKPNAITYNSIMLGLCK 590
            EM   G  PD  TYS+L+ GL  EG    A+     +EE    KP    +N+++LGLCK
Sbjct: 447 YEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCK 506

Query: 591 ARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSA 650
            R+T  A++    MV +   P E +Y IL+EG+A+E   + A E+L+EL  R V+ +++ 
Sbjct: 507 IRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAV 566

BLAST of Lsi08G010400 vs. TAIR 10
Match: AT1G08610.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 340.1 bits (871), Expect = 3.9e-93
Identity = 187/506 (36.96%), Postives = 279/506 (55.14%), Query Frame = 0

Query: 131 NLHTHLNGSSSSSSSSSNHSQSFEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDI 190
           NL   +        SS       +E  NN  L  L  NG+L +  K +E M     +P  
Sbjct: 80  NLRARVKPMKQFGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHF 139

Query: 191 IACTSLIRGLCKTGKTRKATRVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDR 250
            +C++L+RGL +  +  KA  ++ ++  SG VPD ITYN++I   CK G I +AL LL+ 
Sbjct: 140 PSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLED 199

Query: 251 MSVS---PDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESG 310
           MS+S   PDV+TYNT++R + D G  +QA+     QLQ  C P +ITYT+L+E  C+  G
Sbjct: 200 MSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCG 259

Query: 311 VGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNI 370
             +A+++L++M  +GC PD+VTYN L+N  C+ G L+E    + H+ S+G + N +T+N 
Sbjct: 260 SARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNT 319

Query: 371 ILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHG 430
           +L S+CS   W + E++L  M +    P+V+T+NILIN LC+  LL RAID   +     
Sbjct: 320 LLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQ----- 379

Query: 431 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 490
                                         M+ + C PDIVTYNT+L A+ K+G VD A+
Sbjct: 380 ------------------------------MLEQKCLPDIVTYNTVLGAMSKEGMVDDAI 439

Query: 491 EILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGL 550
           E+L  L +  C P LITYN+VIDGL+K G  + A++L  +M   G+ PD IT  SL+ G 
Sbjct: 440 ELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGF 499

Query: 551 SREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVGRGCKPTE 610
            R   V+EA     +    G      TY  ++ GLCK ++   AI+ +  M+  GCKP E
Sbjct: 500 CRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDE 550

Query: 611 ASYMILIEGLAYEGLAKEALELLNEL 634
             Y  +++G+   G+  EA++L  +L
Sbjct: 560 TIYTAIVKGVEEMGMGSEAVQLQKKL 550

BLAST of Lsi08G010400 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 333.2 bits (853), Expect = 4.8e-91
Identity = 167/488 (34.22%), Postives = 276/488 (56.56%), Query Frame = 0

Query: 166 VRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATR-VMEILEDSGAVPD 225
           +  G+L+   +  E MV  G     ++   ++ G CK G+   A   + E+    G  PD
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294

Query: 226 VITYNVLISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLD 285
             T+N L++G CK+G +  A++++D M      PDV TYN+++  LC  G++K+A+EVLD
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354

Query: 286 RQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 345
           + + R+C P+ +TY  LI   CKE+ V +A +L   +  KG  PDV T+N LI G+C   
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414

Query: 346 RLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFN 405
               A++    M S GC+P+  T+N+++ S+CS G+  +A  +L +M   GC+ SV+T+N
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474

Query: 406 ILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 465
            LI+  C+      A ++ ++M  HG + NS++YN L+ G CK ++++ A + +D M+  
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534

Query: 466 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDA 525
           G  PD  TYN+LLT  C+ G +  A +I+  + S GC P ++TY T+I GL K G+ E A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594

Query: 526 IKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHD-LEEMGVKPNAITYNSIML 585
            KLL  ++ KG+      Y+ ++ GL R+ K  EAI  F + LE+    P+A++Y  +  
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654

Query: 586 GLCKARQTVR-AIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVV 645
           GLC     +R A+DFL  ++ +G  P  +S  +L EGL    + +  ++L+N +  +   
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARF 714

Query: 646 KKSSAEQV 648
            +     V
Sbjct: 715 SEEEVSMV 722

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q3EDF81.7e-25873.36Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... [more]
Q9SR006.9e-12744.22Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... [more]
A3KPF81.5e-9438.68Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidop... [more]
Q9FRS45.5e-9236.96Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana OX... [more]
Q9LFF16.7e-9034.22Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A5A7VFH10.0e+0095.41Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BB350.0e+0095.41pentatricopeptide repeat-containing protein At1g09900 OS=Cucumis melo OX=3656 GN... [more]
A0A6J1BSC20.0e+0091.49pentatricopeptide repeat-containing protein At1g09900 OS=Momordica charantia OX=... [more]
A0A6J1HFE34.9e-31087.54pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata... [more]
A0A6J1K4044.1e-30887.38pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita maxima O... [more]
Match NameE-valueIdentityDescription
XP_038886112.10.0e+0097.54pentatricopeptide repeat-containing protein At1g09900 [Benincasa hispida][more]
XP_008444958.10.0e+0095.41PREDICTED: pentatricopeptide repeat-containing protein At1g09900 [Cucumis melo] ... [more]
XP_011649703.10.0e+0093.93pentatricopeptide repeat-containing protein At1g09900 [Cucumis sativus] >KAE8652... [more]
XP_022132179.10.0e+0091.49pentatricopeptide repeat-containing protein At1g09900 [Momordica charantia][more]
KAG6598746.10.0e+0087.56Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
Match NameE-valueIdentityDescription
AT1G09900.11.2e-25973.36Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT3G04760.14.9e-12844.22Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G79080.11.1e-9538.68Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G08610.13.9e-9336.96Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G53700.14.8e-9134.22Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 165..185
e-value: 0.62
score: 10.4
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 391..423
e-value: 1.7E-12
score: 46.8
coord: 220..252
e-value: 1.1E-12
score: 47.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 226..252
e-value: 2.0E-7
score: 28.7
coord: 434..467
e-value: 5.1E-9
score: 33.8
coord: 398..431
e-value: 5.6E-8
score: 30.5
coord: 192..225
e-value: 6.7E-5
score: 20.8
coord: 503..537
e-value: 6.6E-11
score: 39.7
coord: 538..572
e-value: 4.9E-8
score: 30.7
coord: 468..500
e-value: 9.8E-8
score: 29.7
coord: 328..362
e-value: 1.8E-10
score: 38.4
coord: 258..292
e-value: 2.8E-6
score: 25.1
coord: 293..327
e-value: 5.8E-7
score: 27.3
coord: 573..607
e-value: 5.5E-7
score: 27.4
coord: 363..397
e-value: 6.9E-9
score: 33.3
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 503..548
e-value: 1.8E-15
score: 56.9
coord: 570..618
e-value: 1.5E-11
score: 44.3
coord: 430..479
e-value: 1.4E-15
score: 57.2
coord: 255..304
e-value: 4.9E-14
score: 52.3
coord: 325..374
e-value: 4.6E-18
score: 65.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 224..254
score: 11.257313
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 466..500
score: 13.011121
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 536..570
score: 12.967276
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 606..640
score: 9.032168
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 431..465
score: 12.24383
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 571..605
score: 11.355965
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 326..360
score: 14.293592
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 396..430
score: 12.298636
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 189..223
score: 10.775016
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 256..290
score: 11.750571
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 501..535
score: 12.83574
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 291..325
score: 12.397287
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 361..395
score: 12.572669
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 494..563
e-value: 2.2E-22
score: 81.5
coord: 564..636
e-value: 1.1E-16
score: 62.9
coord: 354..424
e-value: 1.1E-21
score: 79.2
coord: 285..353
e-value: 4.1E-26
score: 93.7
coord: 425..493
e-value: 2.4E-22
score: 81.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 106..284
e-value: 6.1E-34
score: 119.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..156
NoneNo IPR availablePANTHERPTHR47932:SF45OS02G0565400 PROTEINcoord: 107..650
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 107..650

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi08G010400.1Lsi08G010400.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding