Homology
BLAST of Lsi08G010400 vs. ExPASy Swiss-Prot
Match:
Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)
HSP 1 Score: 893.3 bits (2307), Expect = 1.7e-258
Identity = 446/608 (73.36%), Postives = 508/608 (83.55%), Query Frame = 0
Query: 44 MDVTLPAKHYTDGFCLFHR-HSTKNRGQKVRAKGRVSPETNSLRLYVGEKGKPRFLVIPS 103
MD+ + +GFCL + H RG K+ R S +S ++ +G + + R +
Sbjct: 1 MDLMVSTSSAQEGFCLIQQFHREYKRGNKLDVSCRTSGSISS-KIPLGSRKRNRLV---- 60
Query: 104 DGPEEQLVRAVPRVDTFNSNGRLQHGEKNLHTHLNGSSSSSSSSSNHSQSFEEFENNNHL 163
LV A +V++ NGR Q E + N + + SS N S + E+ E+NNHL
Sbjct: 61 ------LVSAASKVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHL 120
Query: 164 RRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAV 223
R++VR GELEEGFKFLE+MVY G++PDII CT+LIRG C+ GKTRKA +++EILE SGAV
Sbjct: 121 RQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAV 180
Query: 224 PDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDR 283
PDVITYNV+ISGYCK+GEI +AL +LDRMSVSPDVVTYNTILR+LCDSGKLKQAMEVLDR
Sbjct: 181 PDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 240
Query: 284 QLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGR 343
LQR+CYPDVITYTILIEATC++SGVG AMKLLDEMRD+GC PDVVTYNVL+NGICKEGR
Sbjct: 241 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 300
Query: 344 LDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNI 403
LDEAIKFLN MPS GCQPNVITHNIILRSMCSTGRWMDAEKLLA+M+RKG SPSVVTFNI
Sbjct: 301 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 360
Query: 404 LINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG 463
LINFLCRKGLLGRAID+LEKMPQHGC PNSLSYNPLLHGFCKEKKMDRAIEYL+ MVSRG
Sbjct: 361 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 420
Query: 464 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAI 523
CYPDIVTYNT+LTALCKDGKV+ AVEILNQL SKGCSPVLITYNTVIDGL+K GKT AI
Sbjct: 421 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 480
Query: 524 KLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGL 583
KLLDEM+ K LKPD ITYSSLVGGLSREGKVDEAI FFH+ E MG++PNA+T+NSIMLGL
Sbjct: 481 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 540
Query: 584 CKARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKS 643
CK+RQT RAIDFL +M+ RGCKP E SY ILIEGLAYEG+AKEALELLNELC++G++KKS
Sbjct: 541 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKS 597
Query: 644 SAEQVVVK 651
SAEQV K
Sbjct: 601 SAEQVAGK 597
BLAST of Lsi08G010400 vs. ExPASy Swiss-Prot
Match:
Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)
HSP 1 Score: 456.1 bits (1172), Expect = 6.9e-127
Identity = 237/536 (44.22%), Postives = 334/536 (62.31%), Query Frame = 0
Query: 120 NSNGR--LQHGEKNLHTHLNGSSS-SSSSSSNHSQS--FEEFENNNHLRRLVRNGELEEG 179
N NGR G +NL T ++ + HSQS F + + R R+G E
Sbjct: 49 NDNGRSFSSSGARNLQTTTTTDATLPTERRQQHSQSLGFRDTQMLKIFHRSCRSGNYIES 108
Query: 180 FKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVPDVITYNVLISG 239
LE MV +G PD+I CT LI+G KA RVMEILE G PDV YN LI+G
Sbjct: 109 LHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVFAYNALING 168
Query: 240 YCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRECYPD 299
+CK I A ++LDRM SPD VTYN ++ +LC GKL A++VL++ L C P
Sbjct: 169 FCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPT 228
Query: 300 VITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIKFLN 359
VITYTILIEAT E GV +A+KL+DEM +G KPD+ TYN +I G+CKEG +D A + +
Sbjct: 229 VITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVR 288
Query: 360 HMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFLCRKG 419
++ GC+P+VI++NI+LR++ + G+W + EKL+ +M + C P+VVT++ILI LCR G
Sbjct: 289 NLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG 348
Query: 420 LLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYN 479
+ A+++L+ M + G TP++ SY+PL+ FC+E ++D AIE+L+ M+S GC PDIV YN
Sbjct: 349 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYN 408
Query: 480 TLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIKLLDEMKGK 539
T+L LCK+GK D A+EI +LG GCSP +YNT+ L G A+ ++ EM
Sbjct: 409 TVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN 468
Query: 540 GLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRA 599
G+ PD ITY+S++ L REG VDEA D+ P+ +TYN ++LG CKA + A
Sbjct: 469 GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDA 528
Query: 600 IDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQV 648
I+ L MVG GC+P E +Y +LIEG+ + G EA+EL N+L + + S +++
Sbjct: 529 INVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRL 583
BLAST of Lsi08G010400 vs. ExPASy Swiss-Prot
Match:
A3KPF8 (Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g79080 PE=2 SV=1)
HSP 1 Score: 348.6 bits (893), Expect = 1.5e-94
Identity = 188/486 (38.68%), Postives = 289/486 (59.47%), Query Frame = 0
Query: 171 LEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVPDVITYNV 230
L + F LE +V G P++ T L+ LCK + +KA RV+E++ SG +PD Y
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 231 LISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRE 290
L++ CK G +G A+QL+++M + VTYN ++R LC G L Q+++ ++R +Q+
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 291 CYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAI 350
P+ TY+ L+EA KE G +A+KLLDE+ KG +P++V+YNVL+ G CKEGR D+A+
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266
Query: 351 KFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFL 410
+P+ G + NV+++NI+LR +C GRW +A LLAEM +PSVVT+NILIN L
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 326
Query: 411 CRKGLLGRAIDVLEKMPQ--HGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 470
G +A+ VL++M + H + SYNP++ CKE K+D ++ LD M+ R C P
Sbjct: 327 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKP 386
Query: 471 DIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIKLL 530
+ TYN + + + KV A I+ L +K Y +VI L + G T A +LL
Sbjct: 387 NEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLL 446
Query: 531 DEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEM-GVKPNAITYNSIMLGLCK 590
EM G PD TYS+L+ GL EG A+ +EE KP +N+++LGLCK
Sbjct: 447 YEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCK 506
Query: 591 ARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSA 650
R+T A++ MV + P E +Y IL+EG+A+E + A E+L+EL R V+ +++
Sbjct: 507 IRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAV 566
BLAST of Lsi08G010400 vs. ExPASy Swiss-Prot
Match:
Q9FRS4 (Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana OX=3702 GN=At1g08610 PE=2 SV=1)
HSP 1 Score: 340.1 bits (871), Expect = 5.5e-92
Identity = 187/506 (36.96%), Postives = 279/506 (55.14%), Query Frame = 0
Query: 131 NLHTHLNGSSSSSSSSSNHSQSFEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDI 190
NL + SS +E NN L L NG+L + K +E M +P
Sbjct: 80 NLRARVKPMKQFGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHF 139
Query: 191 IACTSLIRGLCKTGKTRKATRVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDR 250
+C++L+RGL + + KA ++ ++ SG VPD ITYN++I CK G I +AL LL+
Sbjct: 140 PSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLED 199
Query: 251 MSVS---PDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESG 310
MS+S PDV+TYNT++R + D G +QA+ QLQ C P +ITYT+L+E C+ G
Sbjct: 200 MSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCG 259
Query: 311 VGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNI 370
+A+++L++M +GC PD+VTYN L+N C+ G L+E + H+ S+G + N +T+N
Sbjct: 260 SARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNT 319
Query: 371 ILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHG 430
+L S+CS W + E++L M + P+V+T+NILIN LC+ LL RAID +
Sbjct: 320 LLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQ----- 379
Query: 431 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 490
M+ + C PDIVTYNT+L A+ K+G VD A+
Sbjct: 380 ------------------------------MLEQKCLPDIVTYNTVLGAMSKEGMVDDAI 439
Query: 491 EILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGL 550
E+L L + C P LITYN+VIDGL+K G + A++L +M G+ PD IT SL+ G
Sbjct: 440 ELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGF 499
Query: 551 SREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVGRGCKPTE 610
R V+EA + G TY ++ GLCK ++ AI+ + M+ GCKP E
Sbjct: 500 CRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDE 550
Query: 611 ASYMILIEGLAYEGLAKEALELLNEL 634
Y +++G+ G+ EA++L +L
Sbjct: 560 TIYTAIVKGVEEMGMGSEAVQLQKKL 550
BLAST of Lsi08G010400 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 333.2 bits (853), Expect = 6.7e-90
Identity = 167/488 (34.22%), Postives = 276/488 (56.56%), Query Frame = 0
Query: 166 VRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATR-VMEILEDSGAVPD 225
+ G+L+ + E MV G ++ ++ G CK G+ A + E+ G PD
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 226 VITYNVLISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLD 285
T+N L++G CK+G + A++++D M PDV TYN+++ LC G++K+A+EVLD
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 286 RQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 345
+ + R+C P+ +TY LI CKE+ V +A +L + KG PDV T+N LI G+C
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 346 RLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFN 405
A++ M S GC+P+ T+N+++ S+CS G+ +A +L +M GC+ SV+T+N
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 406 ILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 465
LI+ C+ A ++ ++M HG + NS++YN L+ G CK ++++ A + +D M+
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 466 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDA 525
G PD TYN+LLT C+ G + A +I+ + S GC P ++TY T+I GL K G+ E A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 526 IKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHD-LEEMGVKPNAITYNSIML 585
KLL ++ KG+ Y+ ++ GL R+ K EAI F + LE+ P+A++Y +
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654
Query: 586 GLCKARQTVR-AIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVV 645
GLC +R A+DFL ++ +G P +S +L EGL + + ++L+N + +
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARF 714
Query: 646 KKSSAEQV 648
+ V
Sbjct: 715 SEEEVSMV 722
BLAST of Lsi08G010400 vs. ExPASy TrEMBL
Match:
A0A5A7VFH1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004060 PE=4 SV=1)
HSP 1 Score: 1171.4 bits (3029), Expect = 0.0e+00
Identity = 582/610 (95.41%), Postives = 597/610 (97.87%), Query Frame = 0
Query: 44 MDVTLPAKHYTDGFCLFHRHSTKNRGQKVRAKGRVSPETNSLRLYVGEKGKPRFLVIPSD 103
MD+TLPAKHYTDGFCLFHRH+TKNR ++V AKGRVS ETNSLRL+VGEKGK RF VIPS
Sbjct: 1 MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPSY 60
Query: 104 GPEEQLVRAVPRVDTFNSNGRLQHGEKNLHTHLNGSSSSSSSSSNHSQSFEEFENNNHLR 163
G +EQLVRAVPRVDTF+SNGRL HGEKNLHTHLNGSSSSSSSSSN+SQS EEFENNNHLR
Sbjct: 61 GSDEQLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYSQSSEEFENNNHLR 120
Query: 164 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 223
RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP
Sbjct: 121 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 180
Query: 224 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 283
DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ
Sbjct: 181 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 240
Query: 284 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 343
LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL
Sbjct: 241 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 300
Query: 344 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL 403
DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEM+RKGCSPSVVTFNIL
Sbjct: 301 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIRKGCSPSVVTFNIL 360
Query: 404 INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 463
INFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC
Sbjct: 361 INFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 420
Query: 464 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIK 523
YPDIVTYNTLLTALCKDGKVD+AVEILNQLGSKGCSPVLITYNTVIDGLSKVGKT DAIK
Sbjct: 421 YPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTGDAIK 480
Query: 524 LLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLC 583
LLDEMKGKGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGV+PNAITYNSIMLGLC
Sbjct: 481 LLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC 540
Query: 584 KARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSS 643
KARQTVRAIDFLAYMV RGCKPTEASYMILIEGLAYEGL KEALELL+EL SRGVV+KSS
Sbjct: 541 KARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELLDELYSRGVVRKSS 600
Query: 644 AEQVVVKNTF 654
AEQVVVKNTF
Sbjct: 601 AEQVVVKNTF 610
BLAST of Lsi08G010400 vs. ExPASy TrEMBL
Match:
A0A1S3BB35 (pentatricopeptide repeat-containing protein At1g09900 OS=Cucumis melo OX=3656 GN=LOC103488143 PE=4 SV=1)
HSP 1 Score: 1171.4 bits (3029), Expect = 0.0e+00
Identity = 582/610 (95.41%), Postives = 597/610 (97.87%), Query Frame = 0
Query: 44 MDVTLPAKHYTDGFCLFHRHSTKNRGQKVRAKGRVSPETNSLRLYVGEKGKPRFLVIPSD 103
MD+TLPAKHYTDGFCLFHRH+TKNR ++V AKGRVS ETNSLRL+VGEKGK RF VIPS
Sbjct: 1 MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPSY 60
Query: 104 GPEEQLVRAVPRVDTFNSNGRLQHGEKNLHTHLNGSSSSSSSSSNHSQSFEEFENNNHLR 163
G +EQLVRAVPRVDTF+SNGRL HGEKNLHTHLNGSSSSSSSSSN+SQS EEFENNNHLR
Sbjct: 61 GSDEQLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYSQSSEEFENNNHLR 120
Query: 164 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 223
RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP
Sbjct: 121 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 180
Query: 224 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 283
DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ
Sbjct: 181 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 240
Query: 284 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 343
LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL
Sbjct: 241 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 300
Query: 344 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL 403
DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEM+RKGCSPSVVTFNIL
Sbjct: 301 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIRKGCSPSVVTFNIL 360
Query: 404 INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 463
INFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC
Sbjct: 361 INFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 420
Query: 464 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIK 523
YPDIVTYNTLLTALCKDGKVD+AVEILNQLGSKGCSPVLITYNTVIDGLSKVGKT DAIK
Sbjct: 421 YPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTGDAIK 480
Query: 524 LLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLC 583
LLDEMKGKGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGV+PNAITYNSIMLGLC
Sbjct: 481 LLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC 540
Query: 584 KARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSS 643
KARQTVRAIDFLAYMV RGCKPTEASYMILIEGLAYEGL KEALELL+EL SRGVV+KSS
Sbjct: 541 KARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELLDELYSRGVVRKSS 600
Query: 644 AEQVVVKNTF 654
AEQVVVKNTF
Sbjct: 601 AEQVVVKNTF 610
BLAST of Lsi08G010400 vs. ExPASy TrEMBL
Match:
A0A6J1BSC2 (pentatricopeptide repeat-containing protein At1g09900 OS=Momordica charantia OX=3673 GN=LOC111005101 PE=4 SV=1)
HSP 1 Score: 1129.4 bits (2920), Expect = 0.0e+00
Identity = 570/623 (91.49%), Postives = 589/623 (94.54%), Query Frame = 0
Query: 44 MDVTLPAKHYTDGFCLFHRHSTKNRGQKVRAKGRVSPETNSLRLYVGEKGKPRFLVI-PS 103
MDVTLPAKHYTDGFCLF R ST+NRG+KVRA GRV+ E NSLRLYVG KGK RFLV+ PS
Sbjct: 1 MDVTLPAKHYTDGFCLFQRQSTRNRGRKVRAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
Query: 104 D------------GPEEQLVRAVPRVDTFNSNGRLQHGEKNLHTHLNGSSSSSSSSSNHS 163
D + +VRA+ RVDTF+SNGRLQHGEKNLH HLNG S+SSSS+SNHS
Sbjct: 61 DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNG-SNSSSSASNHS 120
Query: 164 QSFEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKAT 223
QSFEEFENNNHLRRLVRNGELEEGFKF+E+MV GDIPDIIACTSLIRGLCKTGKTRKAT
Sbjct: 121 QSFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKAT 180
Query: 224 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 283
RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS
Sbjct: 181 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240
Query: 284 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 343
GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEM++KGCKPDVVT+
Sbjct: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTF 300
Query: 344 NVLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 403
NVLINGICKEGRLDEAIKFLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR
Sbjct: 301 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 360
Query: 404 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 463
KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR
Sbjct: 361 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420
Query: 464 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVID 523
AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL +KGCSPVLITYNTVID
Sbjct: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVID 480
Query: 524 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKP 583
GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLV GLSREGKVDEAIAFFHDLEEMGV+P
Sbjct: 481 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVRGLSREGKVDEAIAFFHDLEEMGVRP 540
Query: 584 NAITYNSIMLGLCKARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELL 643
NAITYNSIMLGLCK RQT RAIDFLAYMV RGCKPTEASYMILIEGLAYEGLAKEALELL
Sbjct: 541 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELL 600
Query: 644 NELCSRGVVKKSSAEQVVVKNTF 654
NELCSRGVVKKSSAEQVVVKN+F
Sbjct: 601 NELCSRGVVKKSSAEQVVVKNSF 622
BLAST of Lsi08G010400 vs. ExPASy TrEMBL
Match:
A0A6J1HFE3 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata OX=3662 GN=LOC111462544 PE=4 SV=1)
HSP 1 Score: 1072.8 bits (2773), Expect = 4.9e-310
Identity = 534/610 (87.54%), Postives = 564/610 (92.46%), Query Frame = 0
Query: 44 MDVTLPAKHYTDGFCLFHRHSTKNRGQKVRAKGRVSPETNSLRLYVGEKGKPRFLVIPSD 103
MD+TL AKHYTDGFCLF R STKNRG+ VRA+ R +PETNS+ +VG KGKPRFLV+PSD
Sbjct: 1 MDITLHAKHYTDGFCLFQRRSTKNRGRNVRAERRATPETNSVSFFVGGKGKPRFLVVPSD 60
Query: 104 GPEEQLVRAVPRVDTFNSNGRLQHGEKNLHTHLNGSSSSSSSSSNHSQSFEEFENNNHLR 163
EE VRAV + + Q GEKN+HTHLNG SSSSS SSNHSQSFEEFENNNHLR
Sbjct: 61 CSEESFVRAVLKNPS-------QQGEKNVHTHLNG-SSSSSFSSNHSQSFEEFENNNHLR 120
Query: 164 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 223
RLVRNGELEEGFKF+E MVYRGDIPD I CTSLIRGLCKTGKTRKA RVMEILEDSGAVP
Sbjct: 121 RLVRNGELEEGFKFIEGMVYRGDIPDAIVCTSLIRGLCKTGKTRKAARVMEILEDSGAVP 180
Query: 224 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 283
DVITYNVLISGYCKSGEI +AL+LLDRMS+SPDV+TYN ILRTLCDSGKLK+AMEVL RQ
Sbjct: 181 DVITYNVLISGYCKSGEIDNALKLLDRMSISPDVITYNIILRTLCDSGKLKEAMEVLHRQ 240
Query: 284 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 343
LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMR+KGCKPDVVTYNVLINGICKEGRL
Sbjct: 241 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMREKGCKPDVVTYNVLINGICKEGRL 300
Query: 344 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL 403
DEAI+FLN M SYGCQPNVITHNIILRSMCSTGRW DAEKLLAEMVRKGCSPSVVTFNIL
Sbjct: 301 DEAIEFLNEMSSYGCQPNVITHNIILRSMCSTGRWTDAEKLLAEMVRKGCSPSVVTFNIL 360
Query: 404 INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 463
INFLCRKGLLGRAID+LEKMPQHGCTPNS SYNPLLHGFCKEKKM+RAIEYLDIM SRGC
Sbjct: 361 INFLCRKGLLGRAIDILEKMPQHGCTPNSSSYNPLLHGFCKEKKMERAIEYLDIMASRGC 420
Query: 464 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIK 523
YPDIVTYNTLLTALCKDGKVDVAVEILNQLG+KGCSPVLITYNTVIDGLSK GKTEDA+K
Sbjct: 421 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGTKGCSPVLITYNTVIDGLSKAGKTEDAVK 480
Query: 524 LLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLC 583
LLDEMK KGLKPDIITYSSLVGGL REGKVDEAIAFFHDLEE+GV+PN ITYNSIMLGLC
Sbjct: 481 LLDEMKEKGLKPDIITYSSLVGGLCREGKVDEAIAFFHDLEEVGVRPNVITYNSIMLGLC 540
Query: 584 KARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSS 643
K +QTVRAIDFLA MV RGCKP EASYMILIEGLAYEGLAKEALELL+ELCSRGV+KKSS
Sbjct: 541 KVQQTVRAIDFLASMVARGCKPNEASYMILIEGLAYEGLAKEALELLDELCSRGVMKKSS 600
Query: 644 AEQVVVKNTF 654
AE+VV+KN+F
Sbjct: 601 AERVVIKNSF 602
BLAST of Lsi08G010400 vs. ExPASy TrEMBL
Match:
A0A6J1K404 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita maxima OX=3661 GN=LOC111492114 PE=4 SV=1)
HSP 1 Score: 1066.6 bits (2757), Expect = 4.1e-308
Identity = 533/610 (87.38%), Postives = 560/610 (91.80%), Query Frame = 0
Query: 44 MDVTLPAKHYTDGFCLFHRHSTKNRGQKVRAKGRVSPETNSLRLYVGEKGKPRFLVIPSD 103
MD+TL AKHYTDGFCLF R STKN + VRA+ R +PETNS+ VG KGKPRFLVIPSD
Sbjct: 1 MDITLHAKHYTDGFCLFQRRSTKNSSRNVRAERRATPETNSVSFSVGGKGKPRFLVIPSD 60
Query: 104 GPEEQLVRAVPRVDTFNSNGRLQHGEKNLHTHLNGSSSSSSSSSNHSQSFEEFENNNHLR 163
EE VRAV + LQ GEKNLHTHLNG SSSSS SSNHSQSFEEFENNNHLR
Sbjct: 61 CSEESFVRAVLK-------NPLQQGEKNLHTHLNG-SSSSSFSSNHSQSFEEFENNNHLR 120
Query: 164 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 223
RLVRNGELEEGFKF+E MVYRGDIPD I CTSLIRGLCKTGKTRKA RVMEILEDSGAVP
Sbjct: 121 RLVRNGELEEGFKFIEGMVYRGDIPDAIVCTSLIRGLCKTGKTRKAARVMEILEDSGAVP 180
Query: 224 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 283
DVITYNVLISGYCKSGEI +AL+LLDRMS+SPDV+TYN ILRTLCDSGKLK+AMEVL RQ
Sbjct: 181 DVITYNVLISGYCKSGEIDNALKLLDRMSISPDVITYNIILRTLCDSGKLKEAMEVLHRQ 240
Query: 284 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 343
LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMR+KGCKPDVVTYNVLINGICKEGRL
Sbjct: 241 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMREKGCKPDVVTYNVLINGICKEGRL 300
Query: 344 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL 403
DEAI+FLN M SYGCQPNVITHNIILRSMCSTGRW DAEKLLAEMVRKGCSPSVVTFNIL
Sbjct: 301 DEAIEFLNEMSSYGCQPNVITHNIILRSMCSTGRWTDAEKLLAEMVRKGCSPSVVTFNIL 360
Query: 404 INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 463
INFLCRKGLLGRAID+LEKMPQHGCTPNS SYNPLLHGFCKEKKM+RAIEYLDIM SRGC
Sbjct: 361 INFLCRKGLLGRAIDILEKMPQHGCTPNSSSYNPLLHGFCKEKKMERAIEYLDIMASRGC 420
Query: 464 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIK 523
YPDIVTYNTLLTALCKDGKVDVAVEILNQLG+K CSPVLITYNTVIDGLSK GKTEDA+K
Sbjct: 421 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGTKSCSPVLITYNTVIDGLSKAGKTEDAVK 480
Query: 524 LLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLC 583
LLDEMK KGLKPDIITYSSL+GGL REGKVDEAIAFFHDLEE+GV+PN ITYNSIMLGLC
Sbjct: 481 LLDEMKEKGLKPDIITYSSLIGGLCREGKVDEAIAFFHDLEEVGVRPNVITYNSIMLGLC 540
Query: 584 KARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSS 643
K +QTVRAIDFLA MV RGCKP EASYMILIEGLAYEGLAKEALELL+ELCSRGV+KKSS
Sbjct: 541 KVQQTVRAIDFLASMVARGCKPNEASYMILIEGLAYEGLAKEALELLDELCSRGVMKKSS 600
Query: 644 AEQVVVKNTF 654
AE+VV+KN+F
Sbjct: 601 AERVVIKNSF 602
BLAST of Lsi08G010400 vs. NCBI nr
Match:
XP_038886112.1 (pentatricopeptide repeat-containing protein At1g09900 [Benincasa hispida])
HSP 1 Score: 1194.9 bits (3090), Expect = 0.0e+00
Identity = 595/610 (97.54%), Postives = 601/610 (98.52%), Query Frame = 0
Query: 44 MDVTLPAKHYTDGFCLFHRHSTKNRGQKVRAKGRVSPETNSLRLYVGEKGKPRFLVIPSD 103
MD+TLPAKHYTDGFCLFHR +KNRG+KVRAKGRVS ETNSLRLYVGEKGKPRFLVIPSD
Sbjct: 1 MDITLPAKHYTDGFCLFHRRPSKNRGRKVRAKGRVSSETNSLRLYVGEKGKPRFLVIPSD 60
Query: 104 GPEEQLVRAVPRVDTFNSNGRLQHGEKNLHTHLNGSSSSSSSSSNHSQSFEEFENNNHLR 163
EE LVRAVPRVDTF+SNGRLQ GEKNLHTHLNGSSSSSSSSSNHSQSFEEFENNNHLR
Sbjct: 61 CSEEPLVRAVPRVDTFSSNGRLQQGEKNLHTHLNGSSSSSSSSSNHSQSFEEFENNNHLR 120
Query: 164 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 223
RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP
Sbjct: 121 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 180
Query: 224 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 283
DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ
Sbjct: 181 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 240
Query: 284 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 343
LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL
Sbjct: 241 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 300
Query: 344 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL 403
DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL
Sbjct: 301 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL 360
Query: 404 INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 463
INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC
Sbjct: 361 INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 420
Query: 464 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIK 523
YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIK
Sbjct: 421 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIK 480
Query: 524 LLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLC 583
LLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGV+PNAITYNSIMLGLC
Sbjct: 481 LLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC 540
Query: 584 KARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSS 643
K RQTVRAIDFLAYMV +GCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSS
Sbjct: 541 KVRQTVRAIDFLAYMVAKGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSS 600
Query: 644 AEQVVVKNTF 654
AEQVVVKNTF
Sbjct: 601 AEQVVVKNTF 610
BLAST of Lsi08G010400 vs. NCBI nr
Match:
XP_008444958.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g09900 [Cucumis melo] >KAA0065076.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1171.4 bits (3029), Expect = 0.0e+00
Identity = 582/610 (95.41%), Postives = 597/610 (97.87%), Query Frame = 0
Query: 44 MDVTLPAKHYTDGFCLFHRHSTKNRGQKVRAKGRVSPETNSLRLYVGEKGKPRFLVIPSD 103
MD+TLPAKHYTDGFCLFHRH+TKNR ++V AKGRVS ETNSLRL+VGEKGK RF VIPS
Sbjct: 1 MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPSY 60
Query: 104 GPEEQLVRAVPRVDTFNSNGRLQHGEKNLHTHLNGSSSSSSSSSNHSQSFEEFENNNHLR 163
G +EQLVRAVPRVDTF+SNGRL HGEKNLHTHLNGSSSSSSSSSN+SQS EEFENNNHLR
Sbjct: 61 GSDEQLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYSQSSEEFENNNHLR 120
Query: 164 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 223
RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP
Sbjct: 121 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 180
Query: 224 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 283
DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ
Sbjct: 181 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 240
Query: 284 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 343
LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL
Sbjct: 241 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 300
Query: 344 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL 403
DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEM+RKGCSPSVVTFNIL
Sbjct: 301 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIRKGCSPSVVTFNIL 360
Query: 404 INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 463
INFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC
Sbjct: 361 INFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 420
Query: 464 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIK 523
YPDIVTYNTLLTALCKDGKVD+AVEILNQLGSKGCSPVLITYNTVIDGLSKVGKT DAIK
Sbjct: 421 YPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTGDAIK 480
Query: 524 LLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLC 583
LLDEMKGKGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGV+PNAITYNSIMLGLC
Sbjct: 481 LLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC 540
Query: 584 KARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSS 643
KARQTVRAIDFLAYMV RGCKPTEASYMILIEGLAYEGL KEALELL+EL SRGVV+KSS
Sbjct: 541 KARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELLDELYSRGVVRKSS 600
Query: 644 AEQVVVKNTF 654
AEQVVVKNTF
Sbjct: 601 AEQVVVKNTF 610
BLAST of Lsi08G010400 vs. NCBI nr
Match:
XP_011649703.1 (pentatricopeptide repeat-containing protein At1g09900 [Cucumis sativus] >KAE8652149.1 hypothetical protein Csa_022252 [Cucumis sativus])
HSP 1 Score: 1151.7 bits (2978), Expect = 0.0e+00
Identity = 573/610 (93.93%), Postives = 589/610 (96.56%), Query Frame = 0
Query: 44 MDVTLPAKHYTDGFCLFHRHSTKNRGQKVRAKGRVSPETNSLRLYVGEKGKPRFLVIPSD 103
MD+TLPAKHYTDGFCLFHRH+ KNR ++V AKGRVS ETNSLRL+ GEKG RF VIPS
Sbjct: 1 MDLTLPAKHYTDGFCLFHRHTAKNRDRRVMAKGRVSSETNSLRLHAGEKG--RFFVIPSY 60
Query: 104 GPEEQLVRAVPRVDTFNSNGRLQHGEKNLHTHLNGSSSSSSSSSNHSQSFEEFENNNHLR 163
G EEQLVRAVPRVDTF+SNGRL HGEKNLHTHLNGSSSSSSS SNHSQS EE ENNNHLR
Sbjct: 61 GSEEQLVRAVPRVDTFSSNGRLSHGEKNLHTHLNGSSSSSSSYSNHSQSSEEVENNNHLR 120
Query: 164 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 223
RLVRNGELEEGFKFLEDMV RGDIPDIIACTSLIRGLCKTGKT KATRVMEILEDSGAVP
Sbjct: 121 RLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVP 180
Query: 224 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 283
DVITYNVLISGYCK+GEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK+AMEVLDRQ
Sbjct: 181 DVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQ 240
Query: 284 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 343
+QRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL
Sbjct: 241 MQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 300
Query: 344 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL 403
DEAI+FLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEK LAEM+RKGCSPSVVTFNIL
Sbjct: 301 DEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNIL 360
Query: 404 INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 463
INFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLH CK+KKM+RAIEYLDIMVSRGC
Sbjct: 361 INFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGC 420
Query: 464 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIK 523
YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKT+DAIK
Sbjct: 421 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIK 480
Query: 524 LLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLC 583
LLDEMKGKGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLC
Sbjct: 481 LLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLC 540
Query: 584 KARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSS 643
KARQTVRAIDFLAYMV RGCKPTE SYMILIEGLAYEGLAKEALELLNELCSRGVVKKSS
Sbjct: 541 KARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSS 600
Query: 644 AEQVVVKNTF 654
AEQVVVKNTF
Sbjct: 601 AEQVVVKNTF 608
BLAST of Lsi08G010400 vs. NCBI nr
Match:
XP_022132179.1 (pentatricopeptide repeat-containing protein At1g09900 [Momordica charantia])
HSP 1 Score: 1129.4 bits (2920), Expect = 0.0e+00
Identity = 570/623 (91.49%), Postives = 589/623 (94.54%), Query Frame = 0
Query: 44 MDVTLPAKHYTDGFCLFHRHSTKNRGQKVRAKGRVSPETNSLRLYVGEKGKPRFLVI-PS 103
MDVTLPAKHYTDGFCLF R ST+NRG+KVRA GRV+ E NSLRLYVG KGK RFLV+ PS
Sbjct: 1 MDVTLPAKHYTDGFCLFQRQSTRNRGRKVRAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
Query: 104 D------------GPEEQLVRAVPRVDTFNSNGRLQHGEKNLHTHLNGSSSSSSSSSNHS 163
D + +VRA+ RVDTF+SNGRLQHGEKNLH HLNG S+SSSS+SNHS
Sbjct: 61 DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNG-SNSSSSASNHS 120
Query: 164 QSFEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKAT 223
QSFEEFENNNHLRRLVRNGELEEGFKF+E+MV GDIPDIIACTSLIRGLCKTGKTRKAT
Sbjct: 121 QSFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKAT 180
Query: 224 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 283
RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS
Sbjct: 181 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240
Query: 284 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 343
GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEM++KGCKPDVVT+
Sbjct: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTF 300
Query: 344 NVLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 403
NVLINGICKEGRLDEAIKFLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR
Sbjct: 301 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 360
Query: 404 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 463
KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR
Sbjct: 361 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420
Query: 464 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVID 523
AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL +KGCSPVLITYNTVID
Sbjct: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVID 480
Query: 524 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKP 583
GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLV GLSREGKVDEAIAFFHDLEEMGV+P
Sbjct: 481 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVRGLSREGKVDEAIAFFHDLEEMGVRP 540
Query: 584 NAITYNSIMLGLCKARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELL 643
NAITYNSIMLGLCK RQT RAIDFLAYMV RGCKPTEASYMILIEGLAYEGLAKEALELL
Sbjct: 541 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELL 600
Query: 644 NELCSRGVVKKSSAEQVVVKNTF 654
NELCSRGVVKKSSAEQVVVKN+F
Sbjct: 601 NELCSRGVVKKSSAEQVVVKNSF 622
BLAST of Lsi08G010400 vs. NCBI nr
Match:
KAG6598746.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1075.1 bits (2779), Expect = 0.0e+00
Identity = 535/611 (87.56%), Postives = 566/611 (92.64%), Query Frame = 0
Query: 43 TMDVTLPAKHYTDGFCLFHRHSTKNRGQKVRAKGRVSPETNSLRLYVGEKGKPRFLVIPS 102
+MD+TL AKHYTDGFCLF R STKNRG+KVRA+ R +PETNS+ +VG KGKPRFLV+PS
Sbjct: 184 SMDITLHAKHYTDGFCLFQRRSTKNRGRKVRAERRATPETNSVSFFVGGKGKPRFLVVPS 243
Query: 103 DGPEEQLVRAVPRVDTFNSNGRLQHGEKNLHTHLNGSSSSSSSSSNHSQSFEEFENNNHL 162
D EE VRAV + + Q GEKN+HTHLNG SSSSS SSNHSQSFEEFENNNHL
Sbjct: 244 DCSEESFVRAVLKNPS-------QQGEKNVHTHLNG-SSSSSFSSNHSQSFEEFENNNHL 303
Query: 163 RRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAV 222
RRLVRNGELEEGFKF+E MVYRGDIPD I CTSLIRGLCKTGKTRKA RVMEILEDSGAV
Sbjct: 304 RRLVRNGELEEGFKFIEGMVYRGDIPDAIVCTSLIRGLCKTGKTRKAARVMEILEDSGAV 363
Query: 223 PDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDR 282
PDVITYNVLISGYCKSGEI +AL+LLDRMS+SPDV+TYN ILRTLCDSGKLK+AMEVL R
Sbjct: 364 PDVITYNVLISGYCKSGEIDNALKLLDRMSISPDVITYNIILRTLCDSGKLKEAMEVLHR 423
Query: 283 QLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGR 342
QLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMR+KGCKPDVVTYNVLINGICKEGR
Sbjct: 424 QLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMREKGCKPDVVTYNVLINGICKEGR 483
Query: 343 LDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNI 402
LDEAI+FLN M SYGCQPNVITHNIILRSMCSTGRW DAEKLLAEMVRKGCSPSVVTFNI
Sbjct: 484 LDEAIEFLNEMSSYGCQPNVITHNIILRSMCSTGRWTDAEKLLAEMVRKGCSPSVVTFNI 543
Query: 403 LINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG 462
LINFLCRKGLLGRAID+LEKMPQHGCTPNS SYNPLLHGFCKEKKM+RAIEYLDIM SRG
Sbjct: 544 LINFLCRKGLLGRAIDILEKMPQHGCTPNSSSYNPLLHGFCKEKKMERAIEYLDIMASRG 603
Query: 463 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAI 522
CYPDIVTYNTLLTALCKDGKVDVAVEILNQLG+KGCSPVLITYNTVIDGLSK GKTEDA+
Sbjct: 604 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLGTKGCSPVLITYNTVIDGLSKAGKTEDAV 663
Query: 523 KLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGL 582
KLLDEMK KGLKPDIITYSSLVGGL REGKVDEAIAFFHDLEE+GV+PN ITYNSIMLGL
Sbjct: 664 KLLDEMKEKGLKPDIITYSSLVGGLCREGKVDEAIAFFHDLEEVGVRPNVITYNSIMLGL 723
Query: 583 CKARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKS 642
CK +QTVRAIDFLA MV RGCKP EASYMILIEGLAYEGLAKEALELL+ELCSRGV+KKS
Sbjct: 724 CKVQQTVRAIDFLASMVARGCKPNEASYMILIEGLAYEGLAKEALELLDELCSRGVMKKS 783
Query: 643 SAEQVVVKNTF 654
SAE+VV+KN+F
Sbjct: 784 SAERVVIKNSF 786
BLAST of Lsi08G010400 vs. TAIR 10
Match:
AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 893.3 bits (2307), Expect = 1.2e-259
Identity = 446/608 (73.36%), Postives = 508/608 (83.55%), Query Frame = 0
Query: 44 MDVTLPAKHYTDGFCLFHR-HSTKNRGQKVRAKGRVSPETNSLRLYVGEKGKPRFLVIPS 103
MD+ + +GFCL + H RG K+ R S +S ++ +G + + R +
Sbjct: 1 MDLMVSTSSAQEGFCLIQQFHREYKRGNKLDVSCRTSGSISS-KIPLGSRKRNRLV---- 60
Query: 104 DGPEEQLVRAVPRVDTFNSNGRLQHGEKNLHTHLNGSSSSSSSSSNHSQSFEEFENNNHL 163
LV A +V++ NGR Q E + N + + SS N S + E+ E+NNHL
Sbjct: 61 ------LVSAASKVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHL 120
Query: 164 RRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAV 223
R++VR GELEEGFKFLE+MVY G++PDII CT+LIRG C+ GKTRKA +++EILE SGAV
Sbjct: 121 RQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAV 180
Query: 224 PDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDR 283
PDVITYNV+ISGYCK+GEI +AL +LDRMSVSPDVVTYNTILR+LCDSGKLKQAMEVLDR
Sbjct: 181 PDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 240
Query: 284 QLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGR 343
LQR+CYPDVITYTILIEATC++SGVG AMKLLDEMRD+GC PDVVTYNVL+NGICKEGR
Sbjct: 241 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 300
Query: 344 LDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNI 403
LDEAIKFLN MPS GCQPNVITHNIILRSMCSTGRWMDAEKLLA+M+RKG SPSVVTFNI
Sbjct: 301 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 360
Query: 404 LINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG 463
LINFLCRKGLLGRAID+LEKMPQHGC PNSLSYNPLLHGFCKEKKMDRAIEYL+ MVSRG
Sbjct: 361 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 420
Query: 464 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAI 523
CYPDIVTYNT+LTALCKDGKV+ AVEILNQL SKGCSPVLITYNTVIDGL+K GKT AI
Sbjct: 421 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 480
Query: 524 KLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGL 583
KLLDEM+ K LKPD ITYSSLVGGLSREGKVDEAI FFH+ E MG++PNA+T+NSIMLGL
Sbjct: 481 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 540
Query: 584 CKARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKS 643
CK+RQT RAIDFL +M+ RGCKP E SY ILIEGLAYEG+AKEALELLNELC++G++KKS
Sbjct: 541 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKS 597
Query: 644 SAEQVVVK 651
SAEQV K
Sbjct: 601 SAEQVAGK 597
BLAST of Lsi08G010400 vs. TAIR 10
Match:
AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 456.1 bits (1172), Expect = 4.9e-128
Identity = 237/536 (44.22%), Postives = 334/536 (62.31%), Query Frame = 0
Query: 120 NSNGR--LQHGEKNLHTHLNGSSS-SSSSSSNHSQS--FEEFENNNHLRRLVRNGELEEG 179
N NGR G +NL T ++ + HSQS F + + R R+G E
Sbjct: 49 NDNGRSFSSSGARNLQTTTTTDATLPTERRQQHSQSLGFRDTQMLKIFHRSCRSGNYIES 108
Query: 180 FKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVPDVITYNVLISG 239
LE MV +G PD+I CT LI+G KA RVMEILE G PDV YN LI+G
Sbjct: 109 LHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVFAYNALING 168
Query: 240 YCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRECYPD 299
+CK I A ++LDRM SPD VTYN ++ +LC GKL A++VL++ L C P
Sbjct: 169 FCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPT 228
Query: 300 VITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIKFLN 359
VITYTILIEAT E GV +A+KL+DEM +G KPD+ TYN +I G+CKEG +D A + +
Sbjct: 229 VITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVR 288
Query: 360 HMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFLCRKG 419
++ GC+P+VI++NI+LR++ + G+W + EKL+ +M + C P+VVT++ILI LCR G
Sbjct: 289 NLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG 348
Query: 420 LLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYN 479
+ A+++L+ M + G TP++ SY+PL+ FC+E ++D AIE+L+ M+S GC PDIV YN
Sbjct: 349 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYN 408
Query: 480 TLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIKLLDEMKGK 539
T+L LCK+GK D A+EI +LG GCSP +YNT+ L G A+ ++ EM
Sbjct: 409 TVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN 468
Query: 540 GLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRA 599
G+ PD ITY+S++ L REG VDEA D+ P+ +TYN ++LG CKA + A
Sbjct: 469 GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDA 528
Query: 600 IDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQV 648
I+ L MVG GC+P E +Y +LIEG+ + G EA+EL N+L + + S +++
Sbjct: 529 INVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRL 583
BLAST of Lsi08G010400 vs. TAIR 10
Match:
AT1G79080.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 348.6 bits (893), Expect = 1.1e-95
Identity = 188/486 (38.68%), Postives = 289/486 (59.47%), Query Frame = 0
Query: 171 LEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVPDVITYNV 230
L + F LE +V G P++ T L+ LCK + +KA RV+E++ SG +PD Y
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 231 LISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRE 290
L++ CK G +G A+QL+++M + VTYN ++R LC G L Q+++ ++R +Q+
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 291 CYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAI 350
P+ TY+ L+EA KE G +A+KLLDE+ KG +P++V+YNVL+ G CKEGR D+A+
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266
Query: 351 KFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFL 410
+P+ G + NV+++NI+LR +C GRW +A LLAEM +PSVVT+NILIN L
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 326
Query: 411 CRKGLLGRAIDVLEKMPQ--HGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 470
G +A+ VL++M + H + SYNP++ CKE K+D ++ LD M+ R C P
Sbjct: 327 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKP 386
Query: 471 DIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIKLL 530
+ TYN + + + KV A I+ L +K Y +VI L + G T A +LL
Sbjct: 387 NEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLL 446
Query: 531 DEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEM-GVKPNAITYNSIMLGLCK 590
EM G PD TYS+L+ GL EG A+ +EE KP +N+++LGLCK
Sbjct: 447 YEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCK 506
Query: 591 ARQTVRAIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSA 650
R+T A++ MV + P E +Y IL+EG+A+E + A E+L+EL R V+ +++
Sbjct: 507 IRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAV 566
BLAST of Lsi08G010400 vs. TAIR 10
Match:
AT1G08610.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 340.1 bits (871), Expect = 3.9e-93
Identity = 187/506 (36.96%), Postives = 279/506 (55.14%), Query Frame = 0
Query: 131 NLHTHLNGSSSSSSSSSNHSQSFEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDI 190
NL + SS +E NN L L NG+L + K +E M +P
Sbjct: 80 NLRARVKPMKQFGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHF 139
Query: 191 IACTSLIRGLCKTGKTRKATRVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDR 250
+C++L+RGL + + KA ++ ++ SG VPD ITYN++I CK G I +AL LL+
Sbjct: 140 PSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLED 199
Query: 251 MSVS---PDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESG 310
MS+S PDV+TYNT++R + D G +QA+ QLQ C P +ITYT+L+E C+ G
Sbjct: 200 MSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCG 259
Query: 311 VGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNI 370
+A+++L++M +GC PD+VTYN L+N C+ G L+E + H+ S+G + N +T+N
Sbjct: 260 SARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNT 319
Query: 371 ILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHG 430
+L S+CS W + E++L M + P+V+T+NILIN LC+ LL RAID +
Sbjct: 320 LLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQ----- 379
Query: 431 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 490
M+ + C PDIVTYNT+L A+ K+G VD A+
Sbjct: 380 ------------------------------MLEQKCLPDIVTYNTVLGAMSKEGMVDDAI 439
Query: 491 EILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGL 550
E+L L + C P LITYN+VIDGL+K G + A++L +M G+ PD IT SL+ G
Sbjct: 440 ELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGF 499
Query: 551 SREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVGRGCKPTE 610
R V+EA + G TY ++ GLCK ++ AI+ + M+ GCKP E
Sbjct: 500 CRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDE 550
Query: 611 ASYMILIEGLAYEGLAKEALELLNEL 634
Y +++G+ G+ EA++L +L
Sbjct: 560 TIYTAIVKGVEEMGMGSEAVQLQKKL 550
BLAST of Lsi08G010400 vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 333.2 bits (853), Expect = 4.8e-91
Identity = 167/488 (34.22%), Postives = 276/488 (56.56%), Query Frame = 0
Query: 166 VRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATR-VMEILEDSGAVPD 225
+ G+L+ + E MV G ++ ++ G CK G+ A + E+ G PD
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 226 VITYNVLISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLD 285
T+N L++G CK+G + A++++D M PDV TYN+++ LC G++K+A+EVLD
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 286 RQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 345
+ + R+C P+ +TY LI CKE+ V +A +L + KG PDV T+N LI G+C
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 346 RLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFN 405
A++ M S GC+P+ T+N+++ S+CS G+ +A +L +M GC+ SV+T+N
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 406 ILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 465
LI+ C+ A ++ ++M HG + NS++YN L+ G CK ++++ A + +D M+
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 466 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDA 525
G PD TYN+LLT C+ G + A +I+ + S GC P ++TY T+I GL K G+ E A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 526 IKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHD-LEEMGVKPNAITYNSIML 585
KLL ++ KG+ Y+ ++ GL R+ K EAI F + LE+ P+A++Y +
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654
Query: 586 GLCKARQTVR-AIDFLAYMVGRGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVV 645
GLC +R A+DFL ++ +G P +S +L EGL + + ++L+N + +
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARF 714
Query: 646 KKSSAEQV 648
+ V
Sbjct: 715 SEEEVSMV 722
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q3EDF8 | 1.7e-258 | 73.36 | Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... | [more] |
Q9SR00 | 6.9e-127 | 44.22 | Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... | [more] |
A3KPF8 | 1.5e-94 | 38.68 | Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidop... | [more] |
Q9FRS4 | 5.5e-92 | 36.96 | Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana OX... | [more] |
Q9LFF1 | 6.7e-90 | 34.22 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7VFH1 | 0.0e+00 | 95.41 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BB35 | 0.0e+00 | 95.41 | pentatricopeptide repeat-containing protein At1g09900 OS=Cucumis melo OX=3656 GN... | [more] |
A0A6J1BSC2 | 0.0e+00 | 91.49 | pentatricopeptide repeat-containing protein At1g09900 OS=Momordica charantia OX=... | [more] |
A0A6J1HFE3 | 4.9e-310 | 87.54 | pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata... | [more] |
A0A6J1K404 | 4.1e-308 | 87.38 | pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita maxima O... | [more] |
Match Name | E-value | Identity | Description | |
XP_038886112.1 | 0.0e+00 | 97.54 | pentatricopeptide repeat-containing protein At1g09900 [Benincasa hispida] | [more] |
XP_008444958.1 | 0.0e+00 | 95.41 | PREDICTED: pentatricopeptide repeat-containing protein At1g09900 [Cucumis melo] ... | [more] |
XP_011649703.1 | 0.0e+00 | 93.93 | pentatricopeptide repeat-containing protein At1g09900 [Cucumis sativus] >KAE8652... | [more] |
XP_022132179.1 | 0.0e+00 | 91.49 | pentatricopeptide repeat-containing protein At1g09900 [Momordica charantia] | [more] |
KAG6598746.1 | 0.0e+00 | 87.56 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
Match Name | E-value | Identity | Description | |
AT1G09900.1 | 1.2e-259 | 73.36 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT3G04760.1 | 4.9e-128 | 44.22 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT1G79080.1 | 1.1e-95 | 38.68 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G08610.1 | 3.9e-93 | 36.96 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G53700.1 | 4.8e-91 | 34.22 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |