Homology
BLAST of Lsi08G006290 vs. ExPASy Swiss-Prot
Match:
Q9CAF4 (Nuclear pore complex protein NUP1 OS=Arabidopsis thaliana OX=3702 GN=NUP1 PE=1 SV=1)
HSP 1 Score: 412.1 bits (1058), Expect = 2.3e-113
Identity = 494/1428 (34.59%), Postives = 683/1428 (47.83%), Query Frame = 0
Query: 13 GRGGKFQKRPVRRSHTTPYDRPPTALRNSA-------GKGWLSKLVDPAQKLITSSAHRL 72
G GGKF+K RRS TPYDRP T++RN+ G GWLSKLVDPAQ+LIT SA RL
Sbjct: 18 GTGGKFRKPTARRSQKTPYDRPTTSVRNAGLGGGDVRGGGWLSKLVDPAQRLITYSAQRL 77
Query: 73 FSSVFRKRL---------PPPPPSLPLSREANDEVENRNQEEVA----ADPPGTQEGTNV 132
F S+ RKRL P LP R N E + ++E+V+ + E TN
Sbjct: 78 FGSLSRKRLGSGETPLQSPEQQKQLP-ERGVNQETKVGHKEDVSNLSMKNGLIRMEDTNA 137
Query: 133 DFVPSINSNNTHGVSDLEKILKEKTFTRFEIDRLTELLKSRVADVPSGVESRKFEQFPST 192
P G +DLEKIL+ KTFTR E+DRLT LL+S+ AD + E ++ E
Sbjct: 138 SVDPP-----KDGFTDLEKILQGKTFTRSEVDRLTTLLRSKAADSSTMNEEQRNE----- 197
Query: 193 PVISYGKQDGSPKFPAQSQDGVSPH------MVPTHVASANVLDEDVASPAEIAKAFMGS 252
G P P+ +D P +V T S LDE +ASPA++AKA+MGS
Sbjct: 198 ----VGMVVRHP--PSHERDRTHPDNGSMNTLVSTPPGSLRTLDECIASPAQLAKAYMGS 257
Query: 253 RPPKATPLSMASHSQKFGDSFASGN----PSKSSTLSLVPRSPGNFDVVENGFVTPRSRG 312
RP + TP + Q + N P KS T+SLV + P +ENGFVTPRSRG
Sbjct: 258 RPSEVTPSMLGLRGQAGREDSVFLNRTPFPQKSPTMSLVTK-PSGQRPLENGFVTPRSRG 317
Query: 313 RSALYSMARVPYSRVRATPSIKNSVATTDAYRATTSSSSQSAWGQGRLLGSDQG---ALK 372
RSA+YSMAR PYSR +++ I + +S S W + GS QG LK
Sbjct: 318 RSAVYSMARTPYSRPQSSVKI-----------GSLFQASPSKWEESLPSGSRQGFQSGLK 377
Query: 373 RRSSVLDDEMGSVGPIRRIRQKSNHLFHKGLSLPSSSTSIPVSGIGFESAQHLQSTKVHP 432
RRSSVLD+++GSVGP+RRIRQKSN L + L+LP S + + V G E H
Sbjct: 378 RRSSVLDNDIGSVGPVRRIRQKSN-LSSRSLALPVSESPLSVRANGGEKTTH-------- 437
Query: 433 FSSTGGKALYSSEIKRNLSKMSSESENAMTPSSSFPQIPLRSSEMASKILEQLDKLTPPK 492
SK S+E P SSF +P +SSEMASKIL+QLD
Sbjct: 438 -----------------TSKDSAED----IPGSSFNLVPTKSSEMASKILQQLD------ 497
Query: 493 EKSSELKLLSVRNNSPTKLSPSMLHGPALRSLEDVDSAKYLENVEGIRSNDAHDLTSQKK 552
KL+S R SP+KLSPSML GPAL+SL++V++ K+L N+ ++N + D + QK+
Sbjct: 498 ------KLVSTREKSPSKLSPSMLRGPALKSLQNVEAPKFLGNLPEKKAN-SPDSSYQKQ 557
Query: 553 DKFEESSSLKFKVPNDKSISTGDGVGSSVPTKN-TVSGSGLQVSYVGPSLQ----TKCAF 612
+ ES S + ++K+ DG + +K+ + G G+ + SL+ K +F
Sbjct: 558 EISRESVSREVLAQSEKTGDAVDGTSKTGSSKDQDMRGKGVYMPLTN-SLEEHPPKKRSF 617
Query: 613 QMSAHEDFVDMDEE-GYSNGPVADISLERREKADSLVAVSKPNNTEALTVDKPQASIEAK 672
+MSAHEDF+++D++ G ++ P E EK ++ V K + + + +KP EA
Sbjct: 618 RMSAHEDFLELDDDLGAASTP-----CEVAEKQNAF-EVEKSHISMPIG-EKPLTPSEAM 677
Query: 673 PPAASAMNKVNDQGKSDVPVTTEKSPIFSFPTAS-------------------------- 732
P + N QG S+ + TE++ +FP +
Sbjct: 678 PSTSYISNGDASQGTSNGSLETERNKFVAFPIEAVQQSNMASEPTSKFIQGTEKSSISSG 737
Query: 733 ----------------PPSITANV-IGPEST--LRPEKIASSEVP-KAATTPIFGFGEKF 792
P ++ N+ P +T L AS+++ + ++ FG E +
Sbjct: 738 KPTSEEKRIPLEEPKKPAAVFPNISFSPPATGLLNQNSGASADIKLEKTSSTAFGVSEAW 797
Query: 793 PSQKEAVSSAPTFAFGNKVTTSANE----------QNAIPVVTSEGNVE-----PTEQAS 852
E+ + A G + +TSA NA+ S G++ P ++
Sbjct: 798 AKPTESKKTFSNSASGAESSTSAAPTLNGSIFSAGANAVTPPPSNGSLTSSPSFPPSISN 857
Query: 853 APTTFKFGDKATFPIPANAATENGNKNAGSLFKFASPLVNEKEGAKVGGSASVFKAESSS 912
P+ GD + + + AAT N + G L P N+ S S + SS
Sbjct: 858 IPSDNSVGDMPS-TVQSFAATHNSSSIFGKL-----PTSND------SNSQSTSASPLSS 917
Query: 913 SSILSFGVP-----KESMSEKSGDKSSDAGLAVGTSGNLLLSSVSTSTSTPTPSLFSFSS 972
+S FG P ++SE SG S + + T GN TST F F
Sbjct: 918 TSPFKFGQPAAPFSAPAVSESSGQISKETEVKNATFGN---------TST-----FKFGG 977
Query: 973 PSTNSNLNNGSLVSTTPSTFPTPATTFSNNITNQNSSIKPSFNAATSNSEPVTTTSLPMS 1032
++ + + P F ++ S++ PS AA++
Sbjct: 978 MASADQSTGIVFGAKSAENKSRPGFVFGSSSVVGGSTLNPSTAAASA------------- 1037
Query: 1033 SPMPSFSAAPIFKFGSSSVPSTSAPALSAPSGVGSIETKSKQETTFGNLSGIPPSDTSAV 1092
P S + IF SSS P T +SA S + + FG S S S++
Sbjct: 1038 ---PESSGSLIFGVTSSSTPGTETSKISASSA-----ATNTGNSVFGTSSFAFTSSGSSM 1097
Query: 1093 ---KVSSTGSSVFQFGAASTTSDSNKRPENSTFPPSNVPAFGAPVSPASSGLASSTQSTP 1152
+STGSSVF F A S+ S ++ + + S A A SG +STQS P
Sbjct: 1098 VGGVSASTGSSVFGFNAVSSASATSSQSQASNL----FGAGNAQTGNTGSGTTTSTQSIP 1157
Query: 1153 VLQFSS--SSTSFGLTGNTGLASGGSLFGSSAPASNLFTTGTTFGLASSSSSANNSISSS 1212
QF S S+ SFGL+GN+ LAS S FG S +FT+ +T L+S++SSA++S + S
Sbjct: 1158 -FQFGSSPSAPSFGLSGNSSLASNSSPFGFSKSEPAVFTSVSTPQLSSTNSSASSSSTMS 1217
Query: 1213 A---GTSSSFFNWQPSSTPSFSTGF--SSTPTAGFSFGLSSSSAASNSAPMLFGSSSTGA 1272
+ GTS N P+S P FS+ F SSTPT FSFG SS++ S++ +FG+S+
Sbjct: 1218 SPLFGTSWQAPNSSPNSGPVFSSSFTTSSTPTT-FSFGGSSAATVSSTTTPIFGASTNNT 1277
Query: 1273 STPS-MFSFTSAATATTPQPA-----------FGNSNHGFTFGSTPPA----NNDQASME 1306
+PS +F F S T QP FGNS GF FG+ NN Q SME
Sbjct: 1278 PSPSPIFGFGSTPPTTPQQPVFGNSGTPSQSLFGNSTPGFAFGAPNNGNGINNNQQVSME 1309
BLAST of Lsi08G006290 vs. ExPASy TrEMBL
Match:
A0A1S3C4Z3 (nuclear pore complex protein NUP1-like OS=Cucumis melo OX=3656 GN=LOC103496528 PE=4 SV=1)
HSP 1 Score: 2011.9 bits (5211), Expect = 0.0e+00
Identity = 1123/1307 (85.92%), Postives = 1188/1307 (90.90%), Query Frame = 0
Query: 1 MATEREEVRYEGGRGGKFQKRPVRRSHTTPYDRPPTALRNSAGKGWLSKLVDPAQKLITS 60
MATEREEV+YEGGRGGKFQKRP+RRSHTTPYDRPPTALRNSA KGWLSKLVDPAQKLITS
Sbjct: 1 MATEREEVQYEGGRGGKFQKRPIRRSHTTPYDRPPTALRNSAAKGWLSKLVDPAQKLITS 60
Query: 61 SAHRLFSSVFRKRLPPPPPSLPLSREANDEVENRNQEEVAADPPGTQEGTNVDFVPSINS 120
SAHRLFS+VFRKRLPPPPPS LSREAN+E+E+RNQEEVAADP GTQEGTNV FVPSINS
Sbjct: 61 SAHRLFSTVFRKRLPPPPPSFSLSREANEEMEHRNQEEVAADPSGTQEGTNVGFVPSINS 120
Query: 121 NNTHGVSDLEKILKEKTFTRFEIDRLTELLKSRVADVPSGVESRKFEQFPSTPVISYGKQ 180
+NT G+SDLEKILKEKTF+RFEIDRLTELLKSRVADVPSGVESRKFEQ PSTPV S+G Q
Sbjct: 121 SNTQGLSDLEKILKEKTFSRFEIDRLTELLKSRVADVPSGVESRKFEQVPSTPVTSHGLQ 180
Query: 181 DGSPKFPAQSQDGVSPHMVPTHVASANVLDEDVASPAEIAKAFMGSRPPKATPLSMASHS 240
+GSPKFP QSQDGVSPHM PTHV +ANVLDEDVASPAEIAKA+MGSRPPKATPLSMA
Sbjct: 181 EGSPKFPTQSQDGVSPHMAPTHVVNANVLDEDVASPAEIAKAYMGSRPPKATPLSMA--- 240
Query: 241 QKFGDSFASGNPSKSSTLSLVPRSPGNFDVVENGFVTPRSRGRSALYSMARVPYSRVRAT 300
GNPSKSSTLSLVPRSPGNFDVVENGFVTPRSRGRSALYSMARVPYSRVRAT
Sbjct: 241 ---------GNPSKSSTLSLVPRSPGNFDVVENGFVTPRSRGRSALYSMARVPYSRVRAT 300
Query: 301 PSIKNSVATTDAYRATTSSSSQSAWGQGRLLGSDQGALKRRSSVLDDEMGSVGPIRRIRQ 360
PSIKNS+ATTDAYRATTSSSSQSAW QG LLGS QGALKRR+SVLDD+MGSVGPIRR RQ
Sbjct: 301 PSIKNSIATTDAYRATTSSSSQSAWEQGGLLGSKQGALKRRNSVLDDDMGSVGPIRRTRQ 360
Query: 361 KSNHLFHKGLSLPSSSTSIPVSGIGFESAQHLQSTKVHPFSSTGGKALYSSEIKRNLSKM 420
KSNHLF GLSLPSSSTSIP SGI E+A+HLQSTKVHPFSS GGK LYSSE +RN SK
Sbjct: 361 KSNHLFPTGLSLPSSSTSIPASGIRSETARHLQSTKVHPFSSNGGKPLYSSETQRNFSKT 420
Query: 421 SSESENAMTPSSSFPQIPLRSSEMASKILEQLDKLTPPKEKSSELKLLSVRNNSPTKLSP 480
S+ES+NAMTPSSSFP+IPLRSSEMASKILEQLD LTPPKEKSSELKLLSVRNNSP KLSP
Sbjct: 421 SAESKNAMTPSSSFPRIPLRSSEMASKILEQLDILTPPKEKSSELKLLSVRNNSPMKLSP 480
Query: 481 SMLHGPALRSLEDVDSAKYLENVEGIRSNDAHDLTSQKKDKFEESSSLKFKVPNDKSIST 540
SMLHGPALRSLE+VDSAKYLENVEGI+SNDA D TSQK DKFEESS K VPNDKSIST
Sbjct: 481 SMLHGPALRSLENVDSAKYLENVEGIQSNDACDPTSQKNDKFEESSPSKSNVPNDKSIST 540
Query: 541 GDGVGSSVPTKNTVSGSGLQVSYVGPSLQTKCAFQMSAHEDFVDMDEEGYSNGPVADISL 600
DGVGSSVPTK+ SGSG+QVS+VGPS+QTKCAFQMSAHEDFVDMDEEG+SNGPVAD S
Sbjct: 541 SDGVGSSVPTKDIGSGSGMQVSFVGPSVQTKCAFQMSAHEDFVDMDEEGFSNGPVADKSF 600
Query: 601 ERREKA-DSLVAVSKPNNTEALTVDKPQASIEAKPPAASAMNKVNDQGKSDVPVTTEKSP 660
E REK DSLV+VSKP NTEA+TV K + SIEAKP S MNK+NDQGKSDVP TTEKSP
Sbjct: 601 EMREKVDDSLVSVSKPKNTEAITVVKSKPSIEAKPSVVSVMNKINDQGKSDVPTTTEKSP 660
Query: 661 IFSFPTASPPSITANVIGPESTLRPEKIASSEVPKAATTPIFGFGEKFPSQKEAVSSAPT 720
IFSFPT S PS TANV GPES+LRPEK+AS E+PKAAT PIFGFGEK PSQKE +S PT
Sbjct: 661 IFSFPTTSSPSSTANVKGPESSLRPEKVASPELPKAATAPIFGFGEKSPSQKETLSQPPT 720
Query: 721 FAFGNKVTTSANEQNAIPVVTSEGNVEPTEQASAPTTFKFGDKATFPIPANAATENGNKN 780
FAFG+K TT+ NEQNAIPVVTSE N EPT+ AS PTTFKFGDKA+F IPANAATENGNK+
Sbjct: 721 FAFGSKATTT-NEQNAIPVVTSEANTEPTKHASTPTTFKFGDKASFSIPANAATENGNKS 780
Query: 781 AGSLFKFASPLVNEKEGAKVGGSASVFKAESSSSSILSFGVPKESMSEKSGDKSSDAGLA 840
AGSLFKF SPLVNEKEGA VGGSASVFKAE+SSSSI SFGVPKESMSEK+GDKSS GL
Sbjct: 781 AGSLFKFTSPLVNEKEGANVGGSASVFKAENSSSSIPSFGVPKESMSEKAGDKSSSPGLI 840
Query: 841 VGTSGNLLLSSVSTSTSTPTPSLFSFSSPSTNSNLNNGSLVSTTPSTFPTPATTFSNNIT 900
GTSGNL SS STSTSTPTPSLFSFSSPSTNSNLNNGSLVS TPST PTPATTFSNN+T
Sbjct: 841 FGTSGNLFSSSDSTSTSTPTPSLFSFSSPSTNSNLNNGSLVSITPSTLPTPATTFSNNVT 900
Query: 901 NQNSSIKPSFNAATSNSEPVTTTSLPMSSPMPSFSAAPIFKFGSSSVPSTSAPALSAPSG 960
+QNSSIKPS AATSNSEPVT+TS PMSSPMPSFSAAPIFKFGSSSVPSTSA ALSAPSG
Sbjct: 901 SQNSSIKPSSIAATSNSEPVTSTSPPMSSPMPSFSAAPIFKFGSSSVPSTSASALSAPSG 960
Query: 961 VGSIETKSKQETTFGNLSGIPPSDTSAVKVSSTGSSVFQFGAASTTSDSNKRPENSTFPP 1020
VGS+E K+K ETTFGNLSG+PPSDT+AVKV+STGSSVFQFGAASTTSD+NK P NSTF
Sbjct: 961 VGSVEAKTKPETTFGNLSGLPPSDTAAVKVASTGSSVFQFGAASTTSDANKGPANSTFAQ 1020
Query: 1021 SNVPAFGAPVSPASSGLASSTQSTPVLQFSSSSTSFGLTGNTGLASGGSLFGSSAPASNL 1080
+N+PAFGAPVS +SSGLASSTQSTP LQF SSSTSFGLTGNTGLASG SLFGSSAPASN
Sbjct: 1021 NNIPAFGAPVSFSSSGLASSTQSTPALQF-SSSTSFGLTGNTGLASGSSLFGSSAPASNP 1080
Query: 1081 FTTGTTFGLASSSSSANNSISSSAGTSSSFFNWQPSSTPSFSTGFSSTPTAGFSFGLSSS 1140
FT+G TFGLASSSSSANNS+SSSAGTSSSFFNWQPSSTPSFSTGFSSTP+ GFSFGLSSS
Sbjct: 1081 FTSGATFGLASSSSSANNSVSSSAGTSSSFFNWQPSSTPSFSTGFSSTPSGGFSFGLSSS 1140
Query: 1141 SAASNSAPMLFGSSSTGASTPSMFSFTSAATATTPQPAFGNSNHGFTFGSTPPA-NNDQA 1200
S+ASNSAPM+FGSSSTGAS SMFSFTSAA+ATT QPAFGNSN+ FTFGSTPPA NN+QA
Sbjct: 1141 SSASNSAPMVFGSSSTGASPASMFSFTSAASATTSQPAFGNSNNAFTFGSTPPANNNEQA 1200
Query: 1201 SMEDSMAEDTVQTVASPMPSFGQQPLTPPPSSGFVFGSTAPSPLGANPFQFGGSQQNVPT 1260
SMEDSMAEDTVQT ASPMPSFGQQPLTPPPSSGF+FGSTAPSPLGANPFQFGGSQQNV
Sbjct: 1201 SMEDSMAEDTVQT-ASPMPSFGQQPLTPPPSSGFMFGSTAPSPLGANPFQFGGSQQNV-- 1260
Query: 1261 PQNPSLFQASGSLDFNASAGGSFSLGAGGGDKSNRKYVKVKSKSRKK 1306
PQNPS FQASGSLDFNASAGGSFSLGAGGGDKSNRKYVKVKSKSRKK
Sbjct: 1261 PQNPSPFQASGSLDFNASAGGSFSLGAGGGDKSNRKYVKVKSKSRKK 1290
BLAST of Lsi08G006290 vs. ExPASy TrEMBL
Match:
A0A5A7SNY9 (Nuclear pore complex protein NUP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G001170 PE=4 SV=1)
HSP 1 Score: 2011.9 bits (5211), Expect = 0.0e+00
Identity = 1123/1307 (85.92%), Postives = 1188/1307 (90.90%), Query Frame = 0
Query: 1 MATEREEVRYEGGRGGKFQKRPVRRSHTTPYDRPPTALRNSAGKGWLSKLVDPAQKLITS 60
MATEREEV+YEGGRGGKFQKRP+RRSHTTPYDRPPTALRNSA KGWLSKLVDPAQKLITS
Sbjct: 1 MATEREEVQYEGGRGGKFQKRPIRRSHTTPYDRPPTALRNSAAKGWLSKLVDPAQKLITS 60
Query: 61 SAHRLFSSVFRKRLPPPPPSLPLSREANDEVENRNQEEVAADPPGTQEGTNVDFVPSINS 120
SAHRLFS+VFRKRLPPPPPS LSREAN+E+E+RNQEEVAADP GTQEGTNV FVPSINS
Sbjct: 61 SAHRLFSTVFRKRLPPPPPSFSLSREANEEMEHRNQEEVAADPSGTQEGTNVGFVPSINS 120
Query: 121 NNTHGVSDLEKILKEKTFTRFEIDRLTELLKSRVADVPSGVESRKFEQFPSTPVISYGKQ 180
+NT G+SDLEKILKEKTF+RFEIDRLTELLKSRVADVPSGVESRKFEQ PSTPV S+G Q
Sbjct: 121 SNTQGLSDLEKILKEKTFSRFEIDRLTELLKSRVADVPSGVESRKFEQVPSTPVTSHGLQ 180
Query: 181 DGSPKFPAQSQDGVSPHMVPTHVASANVLDEDVASPAEIAKAFMGSRPPKATPLSMASHS 240
+GSPKFP QSQDGVSPHM PTHV +ANVLDEDVASPAEIAKA+MGSRPPKATPLSMA
Sbjct: 181 EGSPKFPTQSQDGVSPHMAPTHVVNANVLDEDVASPAEIAKAYMGSRPPKATPLSMA--- 240
Query: 241 QKFGDSFASGNPSKSSTLSLVPRSPGNFDVVENGFVTPRSRGRSALYSMARVPYSRVRAT 300
GNPSKSSTLSLVPRSPGNFDVVENGFVTPRSRGRSALYSMARVPYSRVRAT
Sbjct: 241 ---------GNPSKSSTLSLVPRSPGNFDVVENGFVTPRSRGRSALYSMARVPYSRVRAT 300
Query: 301 PSIKNSVATTDAYRATTSSSSQSAWGQGRLLGSDQGALKRRSSVLDDEMGSVGPIRRIRQ 360
PSIKNS+ATTDAYRATTSSSSQSAW QG LLGS QGALKRR+SVLDD+MGSVGPIRR RQ
Sbjct: 301 PSIKNSIATTDAYRATTSSSSQSAWEQGGLLGSKQGALKRRNSVLDDDMGSVGPIRRTRQ 360
Query: 361 KSNHLFHKGLSLPSSSTSIPVSGIGFESAQHLQSTKVHPFSSTGGKALYSSEIKRNLSKM 420
KSNHLF GLSLPSSSTSIP SGI E+A+HLQSTKVHPFSS GGK LYSSE +RN SK
Sbjct: 361 KSNHLFPTGLSLPSSSTSIPASGIRSETARHLQSTKVHPFSSNGGKPLYSSETQRNFSKT 420
Query: 421 SSESENAMTPSSSFPQIPLRSSEMASKILEQLDKLTPPKEKSSELKLLSVRNNSPTKLSP 480
S+ES+NAMTPSSSFP+IPLRSSEMASKILEQLD LTPPKEKSSELKLLSVRNNSP KLSP
Sbjct: 421 SAESKNAMTPSSSFPRIPLRSSEMASKILEQLDILTPPKEKSSELKLLSVRNNSPMKLSP 480
Query: 481 SMLHGPALRSLEDVDSAKYLENVEGIRSNDAHDLTSQKKDKFEESSSLKFKVPNDKSIST 540
SMLHGPALRSLE+VDSAKYLENVEGI+SNDA D TSQK DKFEESS K VPNDKSIST
Sbjct: 481 SMLHGPALRSLENVDSAKYLENVEGIQSNDACDPTSQKNDKFEESSPSKSNVPNDKSIST 540
Query: 541 GDGVGSSVPTKNTVSGSGLQVSYVGPSLQTKCAFQMSAHEDFVDMDEEGYSNGPVADISL 600
DGVGSSVPTK+ SGSG+QVS+VGPS+QTKCAFQMSAHEDFVDMDEEG+SNGPVAD S
Sbjct: 541 SDGVGSSVPTKDIGSGSGMQVSFVGPSVQTKCAFQMSAHEDFVDMDEEGFSNGPVADKSF 600
Query: 601 ERREKA-DSLVAVSKPNNTEALTVDKPQASIEAKPPAASAMNKVNDQGKSDVPVTTEKSP 660
E REK DSLV+VSKP NTEA+TV K + SIEAKP S MNK+NDQGKSDVP TTEKSP
Sbjct: 601 EMREKVDDSLVSVSKPKNTEAITVVKSKPSIEAKPSVVSVMNKINDQGKSDVPTTTEKSP 660
Query: 661 IFSFPTASPPSITANVIGPESTLRPEKIASSEVPKAATTPIFGFGEKFPSQKEAVSSAPT 720
IFSFPT S PS TANV GPES+LRPEK+AS E+PKAAT PIFGFGEK PSQKE +S PT
Sbjct: 661 IFSFPTTSSPSSTANVKGPESSLRPEKVASPELPKAATAPIFGFGEKSPSQKETLSQPPT 720
Query: 721 FAFGNKVTTSANEQNAIPVVTSEGNVEPTEQASAPTTFKFGDKATFPIPANAATENGNKN 780
FAFG+K TT+ NEQNAIPVVTSE N EPT+ AS PTTFKFGDKA+F IPANAATENGNK+
Sbjct: 721 FAFGSKATTT-NEQNAIPVVTSEANTEPTKHASTPTTFKFGDKASFSIPANAATENGNKS 780
Query: 781 AGSLFKFASPLVNEKEGAKVGGSASVFKAESSSSSILSFGVPKESMSEKSGDKSSDAGLA 840
AGSLFKF SPLVNEKEGA VGGSASVFKAE+SSSSI SFGVPKESMSEK+GDKSS GL
Sbjct: 781 AGSLFKFTSPLVNEKEGANVGGSASVFKAENSSSSIPSFGVPKESMSEKAGDKSSSPGLI 840
Query: 841 VGTSGNLLLSSVSTSTSTPTPSLFSFSSPSTNSNLNNGSLVSTTPSTFPTPATTFSNNIT 900
GTSGNL SS STSTSTPTPSLFSFSSPSTNSNLNNGSLVS TPST PTPATTFSNN+T
Sbjct: 841 FGTSGNLFSSSDSTSTSTPTPSLFSFSSPSTNSNLNNGSLVSITPSTLPTPATTFSNNVT 900
Query: 901 NQNSSIKPSFNAATSNSEPVTTTSLPMSSPMPSFSAAPIFKFGSSSVPSTSAPALSAPSG 960
+QNSSIKPS AATSNSEPVT+TS PMSSPMPSFSAAPIFKFGSSSVPSTSA ALSAPSG
Sbjct: 901 SQNSSIKPSSIAATSNSEPVTSTSPPMSSPMPSFSAAPIFKFGSSSVPSTSASALSAPSG 960
Query: 961 VGSIETKSKQETTFGNLSGIPPSDTSAVKVSSTGSSVFQFGAASTTSDSNKRPENSTFPP 1020
VGS+E K+K ETTFGNLSG+PPSDT+AVKV+STGSSVFQFGAASTTSD+NK P NSTF
Sbjct: 961 VGSVEAKTKPETTFGNLSGLPPSDTAAVKVASTGSSVFQFGAASTTSDANKGPANSTFAQ 1020
Query: 1021 SNVPAFGAPVSPASSGLASSTQSTPVLQFSSSSTSFGLTGNTGLASGGSLFGSSAPASNL 1080
+N+PAFGAPVS +SSGLASSTQSTP LQF SSSTSFGLTGNTGLASG SLFGSSAPASN
Sbjct: 1021 NNIPAFGAPVSFSSSGLASSTQSTPALQF-SSSTSFGLTGNTGLASGSSLFGSSAPASNP 1080
Query: 1081 FTTGTTFGLASSSSSANNSISSSAGTSSSFFNWQPSSTPSFSTGFSSTPTAGFSFGLSSS 1140
FT+G TFGLASSSSSANNS+SSSAGTSSSFFNWQPSSTPSFSTGFSSTP+ GFSFGLSSS
Sbjct: 1081 FTSGATFGLASSSSSANNSVSSSAGTSSSFFNWQPSSTPSFSTGFSSTPSGGFSFGLSSS 1140
Query: 1141 SAASNSAPMLFGSSSTGASTPSMFSFTSAATATTPQPAFGNSNHGFTFGSTPPA-NNDQA 1200
S+ASNSAPM+FGSSSTGAS SMFSFTSAA+ATT QPAFGNSN+ FTFGSTPPA NN+QA
Sbjct: 1141 SSASNSAPMVFGSSSTGASPASMFSFTSAASATTSQPAFGNSNNAFTFGSTPPANNNEQA 1200
Query: 1201 SMEDSMAEDTVQTVASPMPSFGQQPLTPPPSSGFVFGSTAPSPLGANPFQFGGSQQNVPT 1260
SMEDSMAEDTVQT ASPMPSFGQQPLTPPPSSGF+FGSTAPSPLGANPFQFGGSQQNV
Sbjct: 1201 SMEDSMAEDTVQT-ASPMPSFGQQPLTPPPSSGFMFGSTAPSPLGANPFQFGGSQQNV-- 1260
Query: 1261 PQNPSLFQASGSLDFNASAGGSFSLGAGGGDKSNRKYVKVKSKSRKK 1306
PQNPS FQASGSLDFNASAGGSFSLGAGGGDKSNRKYVKVKSKSRKK
Sbjct: 1261 PQNPSPFQASGSLDFNASAGGSFSLGAGGGDKSNRKYVKVKSKSRKK 1290
BLAST of Lsi08G006290 vs. ExPASy TrEMBL
Match:
A0A0A0K9E4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G046360 PE=4 SV=1)
HSP 1 Score: 1999.2 bits (5178), Expect = 0.0e+00
Identity = 1110/1307 (84.93%), Postives = 1184/1307 (90.59%), Query Frame = 0
Query: 1 MATEREEVRYEGGRGGKFQKRPVRRSHTTPYDRPPTALRNSAGKGWLSKLVDPAQKLITS 60
MATERE+V+YEGGRGGKFQKRP+RRSHTTPYDRPPTALRNSA KGWLS LVDPA KLI S
Sbjct: 1 MATEREDVQYEGGRGGKFQKRPIRRSHTTPYDRPPTALRNSAAKGWLSNLVDPAHKLINS 60
Query: 61 SAHRLFSSVFRKRLPPPPPSLPLSREANDEVENRNQEEVAADPPGTQEGTNVDFVPSINS 120
+AH LFS+VFRKRLPPPPPS PLSREANDE+E+RNQEEVAADP GTQEGTN+ FVPSINS
Sbjct: 61 TAHWLFSTVFRKRLPPPPPSFPLSREANDEMEHRNQEEVAADPSGTQEGTNIGFVPSINS 120
Query: 121 NNTHGVSDLEKILKEKTFTRFEIDRLTELLKSRVADVPSGVESRKFEQFPSTPVISYGKQ 180
NNT G+SDLEKIL EKTF+RFEIDRLTELLKSRVADVP GVESRKFEQ PSTPV S+G Q
Sbjct: 121 NNTQGLSDLEKILNEKTFSRFEIDRLTELLKSRVADVPRGVESRKFEQVPSTPVTSHGIQ 180
Query: 181 DGSPKFPAQSQDGVSPHMVPTHVASANVLDEDVASPAEIAKAFMGSRPPKATPLSMASHS 240
+GSPK P QSQDGVSPHM THV +ANVLDEDVASPAEIAKA+MGSRPPKATPLSMA
Sbjct: 181 EGSPKLPTQSQDGVSPHMATTHVVTANVLDEDVASPAEIAKAYMGSRPPKATPLSMA--- 240
Query: 241 QKFGDSFASGNPSKSSTLSLVPRSPGNFDVVENGFVTPRSRGRSALYSMARVPYSRVRAT 300
GNP KSSTLSLVPRSPGNFDVVENGFVTPRSRGRSALYSMARVPYSRVRAT
Sbjct: 241 ---------GNPLKSSTLSLVPRSPGNFDVVENGFVTPRSRGRSALYSMARVPYSRVRAT 300
Query: 301 PSIKNSVATTDAYRATTSSSSQSAWGQGRLLGSDQGALKRRSSVLDDEMGSVGPIRRIRQ 360
PSIKNS+AT DAYR+TT SSSQSAW QGRLLGS QGALKRR+SVLDD+MGSVGPIRR RQ
Sbjct: 301 PSIKNSIATADAYRSTTPSSSQSAWEQGRLLGSKQGALKRRNSVLDDDMGSVGPIRRTRQ 360
Query: 361 KSNHLFHKGLSLPSSSTSIPVSGIGFESAQHLQSTKVHPFSSTGGKALYSSEIKRNLSKM 420
KSNHLF L LPSSSTSI SGIG E+A+HLQSTKVHPFSS GGK LYS+EI+RN SKM
Sbjct: 361 KSNHLFSTSLGLPSSSTSIRASGIGSETARHLQSTKVHPFSSNGGKPLYSNEIQRNFSKM 420
Query: 421 SSESENAMTPSSSFPQIPLRSSEMASKILEQLDKLTPPKEKSSELKLLSVRNNSPTKLSP 480
++ES+NAMTPSSSFPQIPLRSSEMASKILEQLDKLTPPKEKSSELKLLSVRNNSP KLSP
Sbjct: 421 TAESKNAMTPSSSFPQIPLRSSEMASKILEQLDKLTPPKEKSSELKLLSVRNNSPMKLSP 480
Query: 481 SMLHGPALRSLEDVDSAKYLENVEGIRSNDAHDLTSQKKDKFEESSSLKFKVPNDKSIST 540
SMLHGPALRSLEDVDSAKYLENVEGIRSNDA DLTSQK DKFEESS KF VPNDKSIST
Sbjct: 481 SMLHGPALRSLEDVDSAKYLENVEGIRSNDARDLTSQKNDKFEESSPSKFNVPNDKSIST 540
Query: 541 GDGVGSSVPTKNTVSGSGLQVSYVGPSLQTKCAFQMSAHEDFVDMDEEGYSNGPVADISL 600
GDGVGSSV TK+ SGSG+QVS+VGPS+QTKCAFQMSAHEDFVDMDEEG+SNGPVAD S
Sbjct: 541 GDGVGSSVSTKDAGSGSGMQVSFVGPSIQTKCAFQMSAHEDFVDMDEEGFSNGPVADKSF 600
Query: 601 ERREKA-DSLVAVSKPNNTEALTVDKPQASIEAKPPAASAMNKVNDQGKSDVPVTTEKSP 660
E + K DSLV+VSKP NTE +TVDK +ASIEAKP S MNK+NDQGKSDVP TTEKSP
Sbjct: 601 EMQGKVDDSLVSVSKPKNTEVITVDKSKASIEAKPFVVSVMNKINDQGKSDVPSTTEKSP 660
Query: 661 IFSFPTASPPSITANVIGPESTLRPEKIASSEVPKAATTPIFGFGEKFPSQKEAVSSAPT 720
IFSFPTAS PSITANV G ES+LRPEK+AS E+PKAAT PIFGFGEK PSQKEA S PT
Sbjct: 661 IFSFPTASSPSITANVKGTESSLRPEKVASPELPKAATAPIFGFGEKSPSQKEAGSHPPT 720
Query: 721 FAFGNKVTTSANEQNAIPVVTSEGNVEPTEQASAPTTFKFGDKATFPIPANAATENGNKN 780
FAFG+K TT+ NEQN I VVTSE NVEPT+QAS PTTFKFGDKA+FPIPANAATENGNK+
Sbjct: 721 FAFGSKATTT-NEQNTIHVVTSEANVEPTQQASPPTTFKFGDKASFPIPANAATENGNKS 780
Query: 781 AGSLFKFASPLVNEKEGAKVGGSASVFKAESSSSSILSFGVPKESMSEKSGDKSSDAGLA 840
AGSLFKFASPLVNEKEGA VGGSASVFKAE+SSSSI SFGVPKES+SEK+GDKSS GL
Sbjct: 781 AGSLFKFASPLVNEKEGANVGGSASVFKAENSSSSIPSFGVPKESISEKAGDKSSSPGLI 840
Query: 841 VGTSGNLLLSSVSTSTSTPTPSLFSFSSPSTNSNLNNGSLVSTTPSTFPTPATTFSNNIT 900
GTSGN SSVSTSTSTPTPSLFSFS+PSTNSNLNNGSLVSTTPST PTPATTFSNN+T
Sbjct: 841 FGTSGNFFSSSVSTSTSTPTPSLFSFSTPSTNSNLNNGSLVSTTPSTLPTPATTFSNNVT 900
Query: 901 NQNSSIKPSFNAATSNSEPVTTTSLPMSSPMPSFSAAPIFKFGSSSVPSTSAPALSAPSG 960
+QNSS+KPSF+AATSNSEPV++TS P SSPMPSFSAAPIFKFGSSSVPSTSAPALSAPS
Sbjct: 901 SQNSSVKPSFSAATSNSEPVSSTSPPTSSPMPSFSAAPIFKFGSSSVPSTSAPALSAPSV 960
Query: 961 VGSIETKSKQETTFGNLSGIPPSDTSAVKVSSTGSSVFQFGAASTTSDSNKRPENSTFPP 1020
VGS+ETK+K ETTFGNLSG P SDTSAVKV+STG+SVFQFGAASTTSD+NK P NSTF
Sbjct: 961 VGSVETKTKPETTFGNLSGFPASDTSAVKVASTGNSVFQFGAASTTSDANKGPANSTFAQ 1020
Query: 1021 SNVPAFGAPVSPASSGLASSTQSTPVLQFSSSSTSFGLTGNTGLASGGSLFGSSAPASNL 1080
+N+PAFGAPVS +SSGLA STQSTP LQFSSSSTSFGLT NTGLASG SLFGSSAPASN
Sbjct: 1021 NNIPAFGAPVSFSSSGLALSTQSTPALQFSSSSTSFGLTRNTGLASGSSLFGSSAPASNP 1080
Query: 1081 FTTGTTFGLASSSSSANNSISSSAGTSSSFFNWQPSSTPSFSTGFSSTPTAGFSFGLSSS 1140
FT+G TFGLASSSSSA+NS+SSSAGTSSSFFNWQPSSTPSFSTGFSSTP+ GFSFGLSSS
Sbjct: 1081 FTSGATFGLASSSSSASNSVSSSAGTSSSFFNWQPSSTPSFSTGFSSTPSGGFSFGLSSS 1140
Query: 1141 SAASNSAPMLFGSSSTGASTPSMFSFTSAATATTPQPAFGNSNHGFTFGSTPPA-NNDQA 1200
S+ASNSAPM+FGSSSTGA + SMFSFTSAA+ATT QPAFGNSN+ FTFGSTPPA NN+QA
Sbjct: 1141 SSASNSAPMVFGSSSTGAPSASMFSFTSAASATTSQPAFGNSNNAFTFGSTPPANNNEQA 1200
Query: 1201 SMEDSMAEDTVQTVASPMPSFGQQPLTPPPSSGFVFGSTAPSPLGANPFQFGGSQQNVPT 1260
SMEDSMAEDT+QT ASPMPSFGQQPLTPPPSSGF+FGSTAPSPLGANPFQF GSQQN+
Sbjct: 1201 SMEDSMAEDTIQT-ASPMPSFGQQPLTPPPSSGFMFGSTAPSPLGANPFQFSGSQQNL-- 1260
Query: 1261 PQNPSLFQASGSLDFNASAGGSFSLGAGGGDKSNRKYVKVKSKSRKK 1306
PQNPS FQASGSLDFNASAGGSFSLGAGGGDKSNRKYVKVKSKSRKK
Sbjct: 1261 PQNPSPFQASGSLDFNASAGGSFSLGAGGGDKSNRKYVKVKSKSRKK 1291
BLAST of Lsi08G006290 vs. ExPASy TrEMBL
Match:
A0A6J1FKS9 (nuclear pore complex protein NUP1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444902 PE=4 SV=1)
HSP 1 Score: 1973.4 bits (5111), Expect = 0.0e+00
Identity = 1118/1311 (85.28%), Postives = 1178/1311 (89.86%), Query Frame = 0
Query: 1 MATEREEVRYEGGRGGKFQKRPVRRSHTTPYDRPPTALRNSAGKGWLSKLVDPAQKLITS 60
MATERE V YEGGRGGKFQKRP+RRSHTTPYDRPP ALRNS GKGWLSKLVDPAQKLITS
Sbjct: 1 MATEREGVHYEGGRGGKFQKRPLRRSHTTPYDRPPIALRNSNGKGWLSKLVDPAQKLITS 60
Query: 61 SAHRLFSSVFRKRLPPPPPSLPLSREANDEVENRNQEEVAADPPGTQEGTNVDFVPSINS 120
SAHRLFSSVFRKRLPPPPPSLP+SREANDE+E +NQEEVAADPPGTQEGTN DFVPSINS
Sbjct: 61 SAHRLFSSVFRKRLPPPPPSLPISREANDEMEIKNQEEVAADPPGTQEGTNNDFVPSINS 120
Query: 121 NNTHGVSDLEKILKEKTFTRFEIDRLTELLKSRVADVPSGVESRKFEQFPSTPVISYGKQ 180
NN HGVSDLEKILKEKTFTRFEIDRLTELLKSRVADVPSGVESRKFE STPVISY Q
Sbjct: 121 NNIHGVSDLEKILKEKTFTRFEIDRLTELLKSRVADVPSGVESRKFEMVSSTPVISYDIQ 180
Query: 181 DGSPKFPAQSQDGVSPHMVPTHVASANVLDEDVASPAEIAKAFMGSRPPKATPLSMASHS 240
+GSPKFPA Q+GV PHMVPTHV +ANV DEDVASPAEIAKAFMGSRPPKATPLSM +HS
Sbjct: 181 EGSPKFPA--QEGVRPHMVPTHVLNANVPDEDVASPAEIAKAFMGSRPPKATPLSMVAHS 240
Query: 241 QKFGDSFASGNPSKSSTLSLVPRSPGNFDVVENGFVTPRSRGRSALYSMARVPYSRVRAT 300
QKFGD+FA GNPSKSSTLSLVPRSPGNFD VEN FVTPRSRGRSALYSMAR+PYSRVRAT
Sbjct: 241 QKFGDTFALGNPSKSSTLSLVPRSPGNFD-VENDFVTPRSRGRSALYSMARMPYSRVRAT 300
Query: 301 PSIKNSVATTDAYRATTSSSSQSAWGQGRLLGSDQGALKRRSSVLDDEMGSVGPIRRIRQ 360
PSIKNSVATTD+YRAT +SSSQSAW QGRLL S+QGALKRRSSVLDDE+GSVGPIRRIR
Sbjct: 301 PSIKNSVATTDSYRATVTSSSQSAWEQGRLLESNQGALKRRSSVLDDEIGSVGPIRRIRH 360
Query: 361 KSNHLFHKGLSLPSSSTSIPVSGIGFESAQHLQSTKVHPFSSTGGKALYSSEIKRNLSKM 420
KSN LF KGLSLPSSSTSIPVSGIG E++QHLQSTKVHPFSS GKA YSSE KRNLSKM
Sbjct: 361 KSNLLFPKGLSLPSSSTSIPVSGIGSETSQHLQSTKVHPFSSPAGKAPYSSETKRNLSKM 420
Query: 421 SSESENAMTPSSSFPQIPLRSSEMASKILEQLDKLTPPKEKSSELKLLSVRNNSPTKLSP 480
S+ESEN TPSSSFPQIPLRSSEMA KILEQLDKLTPPKEKSSELKL SVRNNSP KLSP
Sbjct: 421 SAESENDRTPSSSFPQIPLRSSEMALKILEQLDKLTPPKEKSSELKLHSVRNNSPMKLSP 480
Query: 481 SMLHGPALRSLEDVDSAKYLENVEGIRSNDAHDLTSQKKDKFEESSSLKFKVPNDKSIST 540
SMLHGPALRSLEDVDSAKYLENVE IRSND DLTS+KKDKFE+SS LK KVP+DKSIST
Sbjct: 481 SMLHGPALRSLEDVDSAKYLENVEDIRSNDGRDLTSKKKDKFEDSSLLKSKVPSDKSIST 540
Query: 541 GDGVGSSVPTKNTVSGSGLQVSYVGPSLQTKCAFQMSAHEDFVDMDEEGYSNGPVADISL 600
G GVGSSVP+K+TVS SGLQVS+VGPS TKCAFQMS EDFVDMD+E YSNGPV+ S
Sbjct: 541 GGGVGSSVPSKDTVSSSGLQVSFVGPSSLTKCAFQMSVQEDFVDMDDEEYSNGPVSAKSF 600
Query: 601 ERREKA-DSLVAVSKPNNTEALTVDKPQASIEAKPPAASAMNKVNDQGKSDVPVTTEKSP 660
ERREK DSLVAV KP++TEA+TVDKPQASI+AKP S M K+NDQ KSDVPVTTEKS
Sbjct: 601 ERREKVDDSLVAVGKPSDTEAITVDKPQASIQAKPSPVSEMKKINDQAKSDVPVTTEKSS 660
Query: 661 IFSFPTASPPSITANVIGPESTLRPEKIASSEVPKAATTPIFGFGEKFPSQKEAVSSAPT 720
IFSFPTASP S TANVI PEST RPEKIASSEVPKAA PIFGFGEK PSQK+ V S+PT
Sbjct: 661 IFSFPTASPSSTTANVIEPESTTRPEKIASSEVPKAAAAPIFGFGEKLPSQKDPVFSSPT 720
Query: 721 FAFGNKVTTSANEQNAIPVVTSEGNVEPTEQASAPTTFKFGDKATFPIPANAATENGNKN 780
F FGNKVTTS NEQNA+P VTSEGNV PT QASAPTTFKFGDKATFPIPA+ ATENGN
Sbjct: 721 FTFGNKVTTSTNEQNAVPAVTSEGNVAPTLQASAPTTFKFGDKATFPIPASTATENGNSE 780
Query: 781 AGSLFKFASPLVNEKEGAKVGGSASVFKAESSSSSILSFGVPKESMSEKSGD-KSSDAGL 840
AGS FKFAS LVNEKEGAK GSASVFK+ESSSSS LSFGVPKESMSEK+GD KSS AGL
Sbjct: 781 AGSPFKFASSLVNEKEGAK-AGSASVFKSESSSSSTLSFGVPKESMSEKAGDKKSSSAGL 840
Query: 841 AVGTSGNLLLSSVSTSTSTPTPSLFSFSSPSTNSNLNNGSLVSTTPSTFPTPATTFSNNI 900
+VGTSGNLLLSSVS STPTPSLFSFSSP+TNSNL NGSL +TPSTFP+P+ TF +NI
Sbjct: 841 SVGTSGNLLLSSVS---STPTPSLFSFSSPTTNSNLINGSL-GSTPSTFPSPSNTFPSNI 900
Query: 901 TNQNSSIKPSFNAATSNSEPVTTTSLPMSSPMPSFSAAPIFKFGSSSVPSTSAPALSAPS 960
TNQNSSIKPS NAATSNSEPVTTTSL SSPMPSFSAAPIFKFGSSSVPS+ SAPS
Sbjct: 901 TNQNSSIKPSLNAATSNSEPVTTTSLSTSSPMPSFSAAPIFKFGSSSVPSS-----SAPS 960
Query: 961 GVGSIETKSKQETT-FGNLSGIPPSDTSAVKVSSTGSSVFQFGAASTTSDSNKRPENSTF 1020
GVGS+ETK+KQETT FGN+SGI PSDTSA KV STGSSVFQFGAASTTSDSNK+PE STF
Sbjct: 961 GVGSVETKTKQETTPFGNVSGISPSDTSAAKVFSTGSSVFQFGAASTTSDSNKQPEKSTF 1020
Query: 1021 PPSNVPAFGAPVSPASSGLASSTQSTPVLQFSSSSTSFGLTGNTGLASGGSLFGSSAPAS 1080
P +VP+FGAPV PASSG+ASSTQSTPV FSSSSTSFGLTGNTGLASG SL GSSAPAS
Sbjct: 1021 APVSVPSFGAPVLPASSGVASSTQSTPVSPFSSSSTSFGLTGNTGLASGNSLVGSSAPAS 1080
Query: 1081 NLFTTGTTFGLASSSSSANNSISSSAGTSSSFFNWQPSSTPSFSTGFSSTPTAGFSFGLS 1140
NLFT+G TFG SSSSANNS+SS AGTSSSFFNWQ SS PSFS+GF STPT GFSFGL+
Sbjct: 1081 NLFTSGATFGF-GSSSSANNSVSSGAGTSSSFFNWQASSAPSFSSGFGSTPTGGFSFGLA 1140
Query: 1141 SSSAASNSAPMLFGSSSTG-ASTPSMFSFTSAATATTPQPAFGNSNHGFTFGSTPPANND 1200
SSSAAS+S+PMLFGSS+TG AST SMFSFTSAATA QPAFG SNHGFTFGSTPPANND
Sbjct: 1141 SSSAASSSSPMLFGSSTTGAASTTSMFSFTSAATAAPSQPAFGTSNHGFTFGSTPPANND 1200
Query: 1201 QASMEDSMAEDTVQTVAS--PMPSFGQQPLTPPPSSGFVFGSTAPSPLGANPFQFGGSQQ 1260
A+MEDSMAEDTVQTVAS PMPSFGQQPLTPPPSSGFVFGSTAPSPLGANPFQFGGSQQ
Sbjct: 1201 HANMEDSMAEDTVQTVASPTPMPSFGQQPLTPPPSSGFVFGSTAPSPLGANPFQFGGSQQ 1260
Query: 1261 NVPTPQNPSLFQASGSLDFNASAGGSFSLGAGGGDKSNRKYVKVKSKSRKK 1306
NVPTPQNP+ FQASGSLDFNASAGGSFSLGAGGGDKSNRK+VKVKSKSRKK
Sbjct: 1261 NVPTPQNPNPFQASGSLDFNASAGGSFSLGAGGGDKSNRKFVKVKSKSRKK 1297
BLAST of Lsi08G006290 vs. ExPASy TrEMBL
Match:
A0A6J1FF52 (nuclear pore complex protein NUP1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444902 PE=4 SV=1)
HSP 1 Score: 1968.0 bits (5097), Expect = 0.0e+00
Identity = 1118/1315 (85.02%), Postives = 1178/1315 (89.58%), Query Frame = 0
Query: 1 MATEREEVRYEGGRGGKFQKRPVRRSHTTPYDRPPTALRNSAGKGWLSKLVDPAQKLITS 60
MATERE V YEGGRGGKFQKRP+RRSHTTPYDRPP ALRNS GKGWLSKLVDPAQKLITS
Sbjct: 1 MATEREGVHYEGGRGGKFQKRPLRRSHTTPYDRPPIALRNSNGKGWLSKLVDPAQKLITS 60
Query: 61 SAHRLFSSVFRKRLPPPPPSLPLSREANDEVENRNQEEVAADPPGTQEGTNVDFVPSINS 120
SAHRLFSSVFRKRLPPPPPSLP+SREANDE+E +NQEEVAADPPGTQEGTN DFVPSINS
Sbjct: 61 SAHRLFSSVFRKRLPPPPPSLPISREANDEMEIKNQEEVAADPPGTQEGTNNDFVPSINS 120
Query: 121 NNTHGVSDLEKILKEKTFTRFEIDRLTELLKSRVADVPSGVESRKFEQFPSTPVISYGKQ 180
NN HGVSDLEKILKEKTFTRFEIDRLTELLKSRVADVPSGVESRKFE STPVISY Q
Sbjct: 121 NNIHGVSDLEKILKEKTFTRFEIDRLTELLKSRVADVPSGVESRKFEMVSSTPVISYDIQ 180
Query: 181 DGSPKFPAQSQDGVSPHMVPTHVASANVLDEDVASPAEIAKAFMGSRPPKATPLSMASHS 240
+GSPKFPA Q+GV PHMVPTHV +ANV DEDVASPAEIAKAFMGSRPPKATPLSM +HS
Sbjct: 181 EGSPKFPA--QEGVRPHMVPTHVLNANVPDEDVASPAEIAKAFMGSRPPKATPLSMVAHS 240
Query: 241 QKFGDSFASGNPSKSSTLSLVPRSPGNFDVVENGFVTPRSRGRSALYSMARVPYSRVRAT 300
QKFGD+FA GNPSKSSTLSLVPRSPGNFD VEN FVTPRSRGRSALYSMAR+PYSRVRAT
Sbjct: 241 QKFGDTFALGNPSKSSTLSLVPRSPGNFD-VENDFVTPRSRGRSALYSMARMPYSRVRAT 300
Query: 301 PSIKNSVATTDAYRATTSSSSQSAWGQGRLLGSDQGALKRRSSVLDDEMGSVGPIRRIRQ 360
PSIKNSVATTD+YRAT +SSSQSAW QGRLL S+QGALKRRSSVLDDE+GSVGPIRRIR
Sbjct: 301 PSIKNSVATTDSYRATVTSSSQSAWEQGRLLESNQGALKRRSSVLDDEIGSVGPIRRIRH 360
Query: 361 KSNHLFHKGLSLPSSSTSIPVSGIGFESAQHLQSTKVHPFSSTGGKALYSSEIKRNLSKM 420
KSN LF KGLSLPSSSTSIPVSGIG E++QHLQSTKVHPFSS GKA YSSE KRNLSKM
Sbjct: 361 KSNLLFPKGLSLPSSSTSIPVSGIGSETSQHLQSTKVHPFSSPAGKAPYSSETKRNLSKM 420
Query: 421 SSESENAMTPSSSFPQIPLRSSEMASKILEQLDKLTPPKEKSSELKLLSVRNNSPTKLSP 480
S+ESEN TPSSSFPQIPLRSSEMA KILEQLDKLTPPKEKSSELKL SVRNNSP KLSP
Sbjct: 421 SAESENDRTPSSSFPQIPLRSSEMALKILEQLDKLTPPKEKSSELKLHSVRNNSPMKLSP 480
Query: 481 SMLHGPALRSLEDVDSAKYLENVEGIRSNDAHDLTSQKKDKFEESSSLKFKVPNDKSIST 540
SMLHGPALRSLEDVDSAKYLENVE IRSND DLTS+KKDKFE+SS LK KVP+DKSIST
Sbjct: 481 SMLHGPALRSLEDVDSAKYLENVEDIRSNDGRDLTSKKKDKFEDSSLLKSKVPSDKSIST 540
Query: 541 GDGVGSSVPTKNTVSGSGLQVSYVGPSLQTKCAFQMSAHEDFVDMDEEGYSNGPVADISL 600
G GVGSSVP+K+TVS SGLQVS+VGPS TKCAFQMS EDFVDMD+E YSNGPV+ S
Sbjct: 541 GGGVGSSVPSKDTVSSSGLQVSFVGPSSLTKCAFQMSVQEDFVDMDDEEYSNGPVSAKSF 600
Query: 601 ERREKA-DSLVAVSKPNNTEALTVDKPQASIEAKPPAASAMNKVNDQGKSDVPVTTEKSP 660
ERREK DSLVAV KP++TEA+TVDKPQASI+AKP S M K+NDQ KSDVPVTTEKS
Sbjct: 601 ERREKVDDSLVAVGKPSDTEAITVDKPQASIQAKPSPVSEMKKINDQAKSDVPVTTEKSS 660
Query: 661 IFSFPTASPPSITANVIGPESTLRPEKIASSEVPKAATTPIFGFGEKFPSQKEAVSSAPT 720
IFSFPTASP S TANVI PEST RPEKIASSEVPKAA PIFGFGEK PSQK+ V S+PT
Sbjct: 661 IFSFPTASPSSTTANVIEPESTTRPEKIASSEVPKAAAAPIFGFGEKLPSQKDPVFSSPT 720
Query: 721 FAFGNKVTTSANEQNAIPVVTSEGNVEPTEQASAPTTFKFGDKATFPIPANAATENGNKN 780
F FGNKVTTS NEQNA+P VTSEGNV PT QASAPTTFKFGDKATFPIPA+ ATENGN
Sbjct: 721 FTFGNKVTTSTNEQNAVPAVTSEGNVAPTLQASAPTTFKFGDKATFPIPASTATENGNSE 780
Query: 781 AGSLFKFASPLVNEKEGAKVGGSASVFKAESSSSSI----LSFGVPKESMSEKSGD-KSS 840
AGS FKFAS LVNEKEGAK GSASVFK+ESSSSS LSFGVPKESMSEK+GD KSS
Sbjct: 781 AGSPFKFASSLVNEKEGAK-AGSASVFKSESSSSSFNCSTLSFGVPKESMSEKAGDKKSS 840
Query: 841 DAGLAVGTSGNLLLSSVSTSTSTPTPSLFSFSSPSTNSNLNNGSLVSTTPSTFPTPATTF 900
AGL+VGTSGNLLLSSVS STPTPSLFSFSSP+TNSNL NGSL +TPSTFP+P+ TF
Sbjct: 841 SAGLSVGTSGNLLLSSVS---STPTPSLFSFSSPTTNSNLINGSL-GSTPSTFPSPSNTF 900
Query: 901 SNNITNQNSSIKPSFNAATSNSEPVTTTSLPMSSPMPSFSAAPIFKFGSSSVPSTSAPAL 960
+NITNQNSSIKPS NAATSNSEPVTTTSL SSPMPSFSAAPIFKFGSSSVPS+
Sbjct: 901 PSNITNQNSSIKPSLNAATSNSEPVTTTSLSTSSPMPSFSAAPIFKFGSSSVPSS----- 960
Query: 961 SAPSGVGSIETKSKQETT-FGNLSGIPPSDTSAVKVSSTGSSVFQFGAASTTSDSNKRPE 1020
SAPSGVGS+ETK+KQETT FGN+SGI PSDTSA KV STGSSVFQFGAASTTSDSNK+PE
Sbjct: 961 SAPSGVGSVETKTKQETTPFGNVSGISPSDTSAAKVFSTGSSVFQFGAASTTSDSNKQPE 1020
Query: 1021 NSTFPPSNVPAFGAPVSPASSGLASSTQSTPVLQFSSSSTSFGLTGNTGLASGGSLFGSS 1080
STF P +VP+FGAPV PASSG+ASSTQSTPV FSSSSTSFGLTGNTGLASG SL GSS
Sbjct: 1021 KSTFAPVSVPSFGAPVLPASSGVASSTQSTPVSPFSSSSTSFGLTGNTGLASGNSLVGSS 1080
Query: 1081 APASNLFTTGTTFGLASSSSSANNSISSSAGTSSSFFNWQPSSTPSFSTGFSSTPTAGFS 1140
APASNLFT+G TFG SSSSANNS+SS AGTSSSFFNWQ SS PSFS+GF STPT GFS
Sbjct: 1081 APASNLFTSGATFGF-GSSSSANNSVSSGAGTSSSFFNWQASSAPSFSSGFGSTPTGGFS 1140
Query: 1141 FGLSSSSAASNSAPMLFGSSSTG-ASTPSMFSFTSAATATTPQPAFGNSNHGFTFGSTPP 1200
FGL+SSSAAS+S+PMLFGSS+TG AST SMFSFTSAATA QPAFG SNHGFTFGSTPP
Sbjct: 1141 FGLASSSAASSSSPMLFGSSTTGAASTTSMFSFTSAATAAPSQPAFGTSNHGFTFGSTPP 1200
Query: 1201 ANNDQASMEDSMAEDTVQTVAS--PMPSFGQQPLTPPPSSGFVFGSTAPSPLGANPFQFG 1260
ANND A+MEDSMAEDTVQTVAS PMPSFGQQPLTPPPSSGFVFGSTAPSPLGANPFQFG
Sbjct: 1201 ANNDHANMEDSMAEDTVQTVASPTPMPSFGQQPLTPPPSSGFVFGSTAPSPLGANPFQFG 1260
Query: 1261 GSQQNVPTPQNPSLFQASGSLDFNASAGGSFSLGAGGGDKSNRKYVKVKSKSRKK 1306
GSQQNVPTPQNP+ FQASGSLDFNASAGGSFSLGAGGGDKSNRK+VKVKSKSRKK
Sbjct: 1261 GSQQNVPTPQNPNPFQASGSLDFNASAGGSFSLGAGGGDKSNRKFVKVKSKSRKK 1301
BLAST of Lsi08G006290 vs. NCBI nr
Match:
XP_038884354.1 (nuclear pore complex protein NUP1-like isoform X2 [Benincasa hispida])
HSP 1 Score: 2164.0 bits (5606), Expect = 0.0e+00
Identity = 1198/1306 (91.73%), Postives = 1235/1306 (94.56%), Query Frame = 0
Query: 1 MATEREEVRYEGGRGGKFQKRPVRRSHTTPYDRPPTALRNSAGKGWLSKLVDPAQKLITS 60
MATEREEVRYEGGRGGKFQKRP+RRSHTTPYDRPPTALRNSAGKGWLSKLVDPAQKLITS
Sbjct: 1 MATEREEVRYEGGRGGKFQKRPIRRSHTTPYDRPPTALRNSAGKGWLSKLVDPAQKLITS 60
Query: 61 SAHRLFSSVFRKRLPPPPPSLPLSREANDEVENRNQEEVAADPPGTQEGTNVDFVPSINS 120
SAHRLFSSVFRKRLPPPPPSLPLSREANDE+ENRNQEEVAADPP TQEGTNVDFVPSINS
Sbjct: 61 SAHRLFSSVFRKRLPPPPPSLPLSREANDEMENRNQEEVAADPPVTQEGTNVDFVPSINS 120
Query: 121 NNTHGVSDLEKILKEKTFTRFEIDRLTELLKSRVADVPSGVESRKFEQFPSTPVISYGKQ 180
NNTHGVSDLEKILKEKTFTRFEIDRLTELLKSRVADVPSGVES K EQ PSTPVISYGKQ
Sbjct: 121 NNTHGVSDLEKILKEKTFTRFEIDRLTELLKSRVADVPSGVESGKLEQVPSTPVISYGKQ 180
Query: 181 DGSPKFPAQSQDGVSPHMVPTHVASANVLDEDVASPAEIAKAFMGSRPPKATPLSMASHS 240
+G PKFPAQSQDGVSPHMV THV SANVLDEDVASPAEIAKA+MGSRPPKATPLSMASHS
Sbjct: 181 EGCPKFPAQSQDGVSPHMVSTHVVSANVLDEDVASPAEIAKAYMGSRPPKATPLSMASHS 240
Query: 241 QKFGDSFASGNPSKSSTLSLVPRSPGNFDVVENGFVTPRSRGRSALYSMARVPYSRVRAT 300
QKFGD F+ GNPSKS TLSL+PRSPGNFD VENGFVTPRSRGRSALYSMAR+PYSRVRAT
Sbjct: 241 QKFGDGFSLGNPSKSPTLSLMPRSPGNFD-VENGFVTPRSRGRSALYSMARMPYSRVRAT 300
Query: 301 PSIKNSVATTDAYRATTSSSSQSAWGQGRLLGSDQGALKRRSSVLDDEMGSVGPIRRIRQ 360
PSIKNSVATTDAYRA TSSSSQSAWGQGRLLGS+QGALKRR+SVLDDEMGSVGPIRRIR
Sbjct: 301 PSIKNSVATTDAYRA-TSSSSQSAWGQGRLLGSEQGALKRRNSVLDDEMGSVGPIRRIRH 360
Query: 361 KSNHLFHKGLSLPSSSTSIPVSGIGFESAQHLQSTKVHPFSSTGGKALYSSEIKRNLSKM 420
KSNHLF KGLSLPSSSTSIPVSGIG E++QHLQSTKVHPFSSTGGK LYSSE KRNLSKM
Sbjct: 361 KSNHLFPKGLSLPSSSTSIPVSGIGSETSQHLQSTKVHPFSSTGGKGLYSSETKRNLSKM 420
Query: 421 SSESENAMTPSSSFPQIPLRSSEMASKILEQLDKLTPPKEKSSELKLLSVRNNSPTKLSP 480
S+ESEN M PSSSFPQIPLRSSEMASKILEQLDKLTPPKEKSSELKLLSVRNNSP+KLSP
Sbjct: 421 SAESENDMIPSSSFPQIPLRSSEMASKILEQLDKLTPPKEKSSELKLLSVRNNSPSKLSP 480
Query: 481 SMLHGPALRSLEDVDSAKYLENVEGIRSNDAHDLTSQKKDKFEESSSLKFKVPNDKSIST 540
SMLHGPALRSLEDVDSAKYLENVEGIRSNDA DLTS+K DKFEESS LKFKVPNDKSIST
Sbjct: 481 SMLHGPALRSLEDVDSAKYLENVEGIRSNDACDLTSKKNDKFEESSPLKFKVPNDKSIST 540
Query: 541 GDGVGSSVPTKNTVSGSGLQVSYVGPSLQTKCAFQMSAHEDFVDMDEEGYSNGPVADISL 600
G+GVGSSVP K TVSGSG QVS+VGPSLQTKCAFQMSAHEDFVDMDEEGYSNGPVADIS+
Sbjct: 541 GNGVGSSVP-KETVSGSGQQVSFVGPSLQTKCAFQMSAHEDFVDMDEEGYSNGPVADISI 600
Query: 601 ERREKADSLVAVSKPNNTEALTVDKPQASIEAKPPAASAMNKVNDQGKSDVPVTTEKSPI 660
ER+EK +SLVAVSKPNNTEA+TVDKPQASIEAKPP SAMNK+NDQGKSDVPVTTEKSPI
Sbjct: 601 ERQEKVNSLVAVSKPNNTEAITVDKPQASIEAKPPTVSAMNKINDQGKSDVPVTTEKSPI 660
Query: 661 FSFPTASPPSITANVIGPESTLRPEKIASSEVPKAATTPIFGFGEKFPSQKEAVSSAPTF 720
FSFPT S PSITANVIGPES +RPEKIASSEVPKAATTPIFGFGEKFPSQKEAVS APTF
Sbjct: 661 FSFPTTSSPSITANVIGPESNMRPEKIASSEVPKAATTPIFGFGEKFPSQKEAVSFAPTF 720
Query: 721 AFGNKVTTSANEQNAIPVVTSEGNVEPTEQASAPTTFKFGDKATFPIPANAATENGNKNA 780
AF NK+TTS NEQNAIPVVTSEGNV+PT+QASAPTTFKFGDKATFPIPANAATENGNKN
Sbjct: 721 AFVNKITTSTNEQNAIPVVTSEGNVQPTQQASAPTTFKFGDKATFPIPANAATENGNKNE 780
Query: 781 GSLFKFASPLVNEKEGAKVGGSASVFKAESSSSSILSFGVPKESMSEKSGDKSSDAGLAV 840
GS FASPLVNEKEGAK GGSASVFKAESSSSSI SFGVPKESMSEK+GDKSS AG AV
Sbjct: 781 GSPL-FASPLVNEKEGAKEGGSASVFKAESSSSSIPSFGVPKESMSEKAGDKSSSAGFAV 840
Query: 841 GTSGNLLLSSVSTSTSTPTPSLFSFSSPSTNSNLNNGSLVSTTPSTFPTPATTFSNNITN 900
GTSG+L SSVSTS STPT LFSFSSPSTNSNLNNGSLVSTTPS FPTPATTFSNNITN
Sbjct: 841 GTSGSLFSSSVSTSISTPTSGLFSFSSPSTNSNLNNGSLVSTTPS-FPTPATTFSNNITN 900
Query: 901 QNSSIKPSFNAATSNSEPVTTTSLPMSSPMPSFSAAPIFKFGSSSVPSTSAPALSAPSGV 960
QNSSIKPSFNAA SNSEPVTTTSLP SS MPSFSAAPI KFGSSSVPSTSAPALSAPSGV
Sbjct: 901 QNSSIKPSFNAAASNSEPVTTTSLPTSSLMPSFSAAPISKFGSSSVPSTSAPALSAPSGV 960
Query: 961 GSIETKSKQETTFGNLSGIPPSDTSAVKVSSTGSSVFQFGAASTTSDSNKRPENSTFPPS 1020
GSIE+K+KQETTFGNLSGIPPSD SAVKVSSTGSSVFQFGAAST SDSNKRP NSTF PS
Sbjct: 961 GSIESKTKQETTFGNLSGIPPSDLSAVKVSSTGSSVFQFGAASTPSDSNKRPANSTFTPS 1020
Query: 1021 NVPAFGAPVSPASSGLASSTQSTPVLQFSSSSTSFGLTGNTGLASGGSLFGSSAPASNLF 1080
NVP FGA SP SSGLASSTQSTPVLQF+SSSTSFGLTGNTGLASG SLFGSSAPASNLF
Sbjct: 1021 NVPTFGASFSPVSSGLASSTQSTPVLQFNSSSTSFGLTGNTGLASGSSLFGSSAPASNLF 1080
Query: 1081 TTGTTFGLASSSSSANNSISSSAGTSSSFFNWQPSSTPSFSTGFSSTPTAGFSFGLSSSS 1140
+G TFGLASSSSS NNS+SSSAGTSSSFFNWQPSSTPSFSTGFSSTPT GFSFGLSSSS
Sbjct: 1081 ASGPTFGLASSSSSVNNSVSSSAGTSSSFFNWQPSSTPSFSTGFSSTPTGGFSFGLSSSS 1140
Query: 1141 AASNSAPMLFGSSSTGASTPSMFSFTSAATATTPQPAFGNSNHGFTFGSTPPANNDQASM 1200
AASNSAP+LFGSSSTG+ TPSMFSFTSAATATT QPAFGNSNHGFTFGSTPPANNDQA+M
Sbjct: 1141 AASNSAPVLFGSSSTGSLTPSMFSFTSAATATTSQPAFGNSNHGFTFGSTPPANNDQANM 1200
Query: 1201 EDSMAEDTVQTVASPMPSFGQQPLTPPPSSGFVFGSTAPSPLGANPFQFGGSQQNVPTPQ 1260
EDSMAEDTVQTV SPMPSFGQQPLTPPPSSGFVFGSTAP PLGA+PFQFGGSQQNVPTPQ
Sbjct: 1201 EDSMAEDTVQTVTSPMPSFGQQPLTPPPSSGFVFGSTAP-PLGASPFQFGGSQQNVPTPQ 1260
Query: 1261 -NPSLFQASGSLDFNASAGGSFSLGAGGGDKSNRKYVKVKSKSRKK 1306
NPS FQASGSLDFNASAGGSFSLGAGGGDKSNRK+VKVKSKSRKK
Sbjct: 1261 NNPSPFQASGSLDFNASAGGSFSLGAGGGDKSNRKFVKVKSKSRKK 1300
BLAST of Lsi08G006290 vs. NCBI nr
Match:
XP_038884353.1 (nuclear pore complex protein NUP1-like isoform X1 [Benincasa hispida])
HSP 1 Score: 2158.3 bits (5591), Expect = 0.0e+00
Identity = 1198/1310 (91.45%), Postives = 1235/1310 (94.27%), Query Frame = 0
Query: 1 MATEREEVRYEGGRGGKFQKRPVRRSHTTPYDRPPTALRNSAGKGWLSKLVDPAQKLITS 60
MATEREEVRYEGGRGGKFQKRP+RRSHTTPYDRPPTALRNSAGKGWLSKLVDPAQKLITS
Sbjct: 1 MATEREEVRYEGGRGGKFQKRPIRRSHTTPYDRPPTALRNSAGKGWLSKLVDPAQKLITS 60
Query: 61 SAHRLFSSVFRKRLPPPPPSLPLSREANDEVENRNQEEVAADPPGTQEGTNVDFVPSINS 120
SAHRLFSSVFRKRLPPPPPSLPLSREANDE+ENRNQEEVAADPP TQEGTNVDFVPSINS
Sbjct: 61 SAHRLFSSVFRKRLPPPPPSLPLSREANDEMENRNQEEVAADPPVTQEGTNVDFVPSINS 120
Query: 121 NNTHGVSDLEKILKEKTFTRFEIDRLTELLKSRVADVPSGVESRKFEQFPSTPVISYGKQ 180
NNTHGVSDLEKILKEKTFTRFEIDRLTELLKSRVADVPSGVES K EQ PSTPVISYGKQ
Sbjct: 121 NNTHGVSDLEKILKEKTFTRFEIDRLTELLKSRVADVPSGVESGKLEQVPSTPVISYGKQ 180
Query: 181 DGSPKFPAQSQDGVSPHMVPTHVASANVLDEDVASPAEIAKAFMGSRPPKATPLSMASHS 240
+G PKFPAQSQDGVSPHMV THV SANVLDEDVASPAEIAKA+MGSRPPKATPLSMASHS
Sbjct: 181 EGCPKFPAQSQDGVSPHMVSTHVVSANVLDEDVASPAEIAKAYMGSRPPKATPLSMASHS 240
Query: 241 QKFGDSFASGNPSKSSTLSLVPRSPGNFDVVENGFVTPRSRGRSALYSMARVPYSRVRAT 300
QKFGD F+ GNPSKS TLSL+PRSPGNFD VENGFVTPRSRGRSALYSMAR+PYSRVRAT
Sbjct: 241 QKFGDGFSLGNPSKSPTLSLMPRSPGNFD-VENGFVTPRSRGRSALYSMARMPYSRVRAT 300
Query: 301 PSIKNSVATTDAYRATTSSSSQSAWGQGRLLGSDQGALKRRSSVLDDEMGSVGPIRRIRQ 360
PSIKNSVATTDAYRA TSSSSQSAWGQGRLLGS+QGALKRR+SVLDDEMGSVGPIRRIR
Sbjct: 301 PSIKNSVATTDAYRA-TSSSSQSAWGQGRLLGSEQGALKRRNSVLDDEMGSVGPIRRIRH 360
Query: 361 KSNHLFHKGLSLPSSSTSIPVSGIGFESAQHLQSTKVHPFSSTGGKALYSSEIKRNLSKM 420
KSNHLF KGLSLPSSSTSIPVSGIG E++QHLQSTKVHPFSSTGGK LYSSE KRNLSKM
Sbjct: 361 KSNHLFPKGLSLPSSSTSIPVSGIGSETSQHLQSTKVHPFSSTGGKGLYSSETKRNLSKM 420
Query: 421 SSESENAMTPSSSFPQIPLRSSEMASKILEQLDKLTPPKEKSSELKLLSVRNNSPTKLSP 480
S+ESEN M PSSSFPQIPLRSSEMASKILEQLDKLTPPKEKSSELKLLSVRNNSP+KLSP
Sbjct: 421 SAESENDMIPSSSFPQIPLRSSEMASKILEQLDKLTPPKEKSSELKLLSVRNNSPSKLSP 480
Query: 481 SMLHGPALRSLEDVDSAKYLENVEGIRSNDAHDLTSQKKDKFEESSSLKFKVPNDKSIST 540
SMLHGPALRSLEDVDSAKYLENVEGIRSNDA DLTS+K DKFEESS LKFKVPNDKSIST
Sbjct: 481 SMLHGPALRSLEDVDSAKYLENVEGIRSNDACDLTSKKNDKFEESSPLKFKVPNDKSIST 540
Query: 541 GDGVGSSVPTKNTVSGSGLQVSYVGPSLQTKCAFQMSAHEDFVDMDEEGYSNGPVADISL 600
G+GVGSSVP K TVSGSG QVS+VGPSLQTKCAFQMSAHEDFVDMDEEGYSNGPVADIS+
Sbjct: 541 GNGVGSSVP-KETVSGSGQQVSFVGPSLQTKCAFQMSAHEDFVDMDEEGYSNGPVADISI 600
Query: 601 ERREKADSLVAVSKPNNTEALTVDKPQASIEAKPPAASAMNKVNDQGKSDVPVTTEKSPI 660
ER+EK +SLVAVSKPNNTEA+TVDKPQASIEAKPP SAMNK+NDQGKSDVPVTTEKSPI
Sbjct: 601 ERQEKVNSLVAVSKPNNTEAITVDKPQASIEAKPPTVSAMNKINDQGKSDVPVTTEKSPI 660
Query: 661 FSFPTASPPSITANVIGPESTLRPEKIASSEVPKAATTPIFGFGEKFPSQKEAVSSAPTF 720
FSFPT S PSITANVIGPES +RPEKIASSEVPKAATTPIFGFGEKFPSQKEAVS APTF
Sbjct: 661 FSFPTTSSPSITANVIGPESNMRPEKIASSEVPKAATTPIFGFGEKFPSQKEAVSFAPTF 720
Query: 721 AFGNKVTTSANEQNAIPVVTSEGNVEPTEQASAPTTFKFGDKATFPIPANAATENGNKNA 780
AF NK+TTS NEQNAIPVVTSEGNV+PT+QASAPTTFKFGDKATFPIPANAATENGNKN
Sbjct: 721 AFVNKITTSTNEQNAIPVVTSEGNVQPTQQASAPTTFKFGDKATFPIPANAATENGNKNE 780
Query: 781 GSLFKFASPLVNEKEGAKVGGSASVFKAESSSS----SILSFGVPKESMSEKSGDKSSDA 840
GS FASPLVNEKEGAK GGSASVFKAESSSS SI SFGVPKESMSEK+GDKSS A
Sbjct: 781 GSPL-FASPLVNEKEGAKEGGSASVFKAESSSSSFNCSIPSFGVPKESMSEKAGDKSSSA 840
Query: 841 GLAVGTSGNLLLSSVSTSTSTPTPSLFSFSSPSTNSNLNNGSLVSTTPSTFPTPATTFSN 900
G AVGTSG+L SSVSTS STPT LFSFSSPSTNSNLNNGSLVSTTPS FPTPATTFSN
Sbjct: 841 GFAVGTSGSLFSSSVSTSISTPTSGLFSFSSPSTNSNLNNGSLVSTTPS-FPTPATTFSN 900
Query: 901 NITNQNSSIKPSFNAATSNSEPVTTTSLPMSSPMPSFSAAPIFKFGSSSVPSTSAPALSA 960
NITNQNSSIKPSFNAA SNSEPVTTTSLP SS MPSFSAAPI KFGSSSVPSTSAPALSA
Sbjct: 901 NITNQNSSIKPSFNAAASNSEPVTTTSLPTSSLMPSFSAAPISKFGSSSVPSTSAPALSA 960
Query: 961 PSGVGSIETKSKQETTFGNLSGIPPSDTSAVKVSSTGSSVFQFGAASTTSDSNKRPENST 1020
PSGVGSIE+K+KQETTFGNLSGIPPSD SAVKVSSTGSSVFQFGAAST SDSNKRP NST
Sbjct: 961 PSGVGSIESKTKQETTFGNLSGIPPSDLSAVKVSSTGSSVFQFGAASTPSDSNKRPANST 1020
Query: 1021 FPPSNVPAFGAPVSPASSGLASSTQSTPVLQFSSSSTSFGLTGNTGLASGGSLFGSSAPA 1080
F PSNVP FGA SP SSGLASSTQSTPVLQF+SSSTSFGLTGNTGLASG SLFGSSAPA
Sbjct: 1021 FTPSNVPTFGASFSPVSSGLASSTQSTPVLQFNSSSTSFGLTGNTGLASGSSLFGSSAPA 1080
Query: 1081 SNLFTTGTTFGLASSSSSANNSISSSAGTSSSFFNWQPSSTPSFSTGFSSTPTAGFSFGL 1140
SNLF +G TFGLASSSSS NNS+SSSAGTSSSFFNWQPSSTPSFSTGFSSTPT GFSFGL
Sbjct: 1081 SNLFASGPTFGLASSSSSVNNSVSSSAGTSSSFFNWQPSSTPSFSTGFSSTPTGGFSFGL 1140
Query: 1141 SSSSAASNSAPMLFGSSSTGASTPSMFSFTSAATATTPQPAFGNSNHGFTFGSTPPANND 1200
SSSSAASNSAP+LFGSSSTG+ TPSMFSFTSAATATT QPAFGNSNHGFTFGSTPPANND
Sbjct: 1141 SSSSAASNSAPVLFGSSSTGSLTPSMFSFTSAATATTSQPAFGNSNHGFTFGSTPPANND 1200
Query: 1201 QASMEDSMAEDTVQTVASPMPSFGQQPLTPPPSSGFVFGSTAPSPLGANPFQFGGSQQNV 1260
QA+MEDSMAEDTVQTV SPMPSFGQQPLTPPPSSGFVFGSTAP PLGA+PFQFGGSQQNV
Sbjct: 1201 QANMEDSMAEDTVQTVTSPMPSFGQQPLTPPPSSGFVFGSTAP-PLGASPFQFGGSQQNV 1260
Query: 1261 PTPQ-NPSLFQASGSLDFNASAGGSFSLGAGGGDKSNRKYVKVKSKSRKK 1306
PTPQ NPS FQASGSLDFNASAGGSFSLGAGGGDKSNRK+VKVKSKSRKK
Sbjct: 1261 PTPQNNPSPFQASGSLDFNASAGGSFSLGAGGGDKSNRKFVKVKSKSRKK 1304
BLAST of Lsi08G006290 vs. NCBI nr
Match:
XP_038884355.1 (nuclear pore complex protein NUP1-like isoform X3 [Benincasa hispida])
HSP 1 Score: 2147.5 bits (5563), Expect = 0.0e+00
Identity = 1195/1310 (91.22%), Postives = 1232/1310 (94.05%), Query Frame = 0
Query: 1 MATEREEVRYEGGRGGKFQKRPVRRSHTTPYDRPPTALRNSAGKGWLSKLVDPAQKLITS 60
MATEREEVRYEGGRGGKFQKRP+RRSHTTPYDRPPTALRNSAGKGWLSKLVDPAQKLITS
Sbjct: 1 MATEREEVRYEGGRGGKFQKRPIRRSHTTPYDRPPTALRNSAGKGWLSKLVDPAQKLITS 60
Query: 61 SAHRLFSSVFRKRLPPPPPSLPLSREANDEVENRNQEEVAADPPGTQEGTNVDFVPSINS 120
SAHRLFSSVFRKRLPPPPPSLPLSREANDE+ENRNQEEVAADPP TQEGTNVDFVPSINS
Sbjct: 61 SAHRLFSSVFRKRLPPPPPSLPLSREANDEMENRNQEEVAADPPVTQEGTNVDFVPSINS 120
Query: 121 NNTHGVSDLEKILKEKTFTRFEIDRLTELLKSRVADVPSGVESRKFEQFPSTPVISYGKQ 180
NNTHGVSDLEKILKEKTFTRFEIDRLTELLKSRVADVPSGVES K EQ PSTPVISYGKQ
Sbjct: 121 NNTHGVSDLEKILKEKTFTRFEIDRLTELLKSRVADVPSGVESGKLEQVPSTPVISYGKQ 180
Query: 181 DGSPKFPAQSQDGVSPHMVPTHVASANVLDEDVASPAEIAKAFMGSRPPKATPLSMASHS 240
+G PKFPAQSQDGVSPHMV THV VLDEDVASPAEIAKA+MGSRPPKATPLSMASHS
Sbjct: 181 EGCPKFPAQSQDGVSPHMVSTHV----VLDEDVASPAEIAKAYMGSRPPKATPLSMASHS 240
Query: 241 QKFGDSFASGNPSKSSTLSLVPRSPGNFDVVENGFVTPRSRGRSALYSMARVPYSRVRAT 300
QKFGD F+ GNPSKS TLSL+PRSPGNFD VENGFVTPRSRGRSALYSMAR+PYSRVRAT
Sbjct: 241 QKFGDGFSLGNPSKSPTLSLMPRSPGNFD-VENGFVTPRSRGRSALYSMARMPYSRVRAT 300
Query: 301 PSIKNSVATTDAYRATTSSSSQSAWGQGRLLGSDQGALKRRSSVLDDEMGSVGPIRRIRQ 360
PSIKNSVATTDAYRA TSSSSQSAWGQGRLLGS+QGALKRR+SVLDDEMGSVGPIRRIR
Sbjct: 301 PSIKNSVATTDAYRA-TSSSSQSAWGQGRLLGSEQGALKRRNSVLDDEMGSVGPIRRIRH 360
Query: 361 KSNHLFHKGLSLPSSSTSIPVSGIGFESAQHLQSTKVHPFSSTGGKALYSSEIKRNLSKM 420
KSNHLF KGLSLPSSSTSIPVSGIG E++QHLQSTKVHPFSSTGGK LYSSE KRNLSKM
Sbjct: 361 KSNHLFPKGLSLPSSSTSIPVSGIGSETSQHLQSTKVHPFSSTGGKGLYSSETKRNLSKM 420
Query: 421 SSESENAMTPSSSFPQIPLRSSEMASKILEQLDKLTPPKEKSSELKLLSVRNNSPTKLSP 480
S+ESEN M PSSSFPQIPLRSSEMASKILEQLDKLTPPKEKSSELKLLSVRNNSP+KLSP
Sbjct: 421 SAESENDMIPSSSFPQIPLRSSEMASKILEQLDKLTPPKEKSSELKLLSVRNNSPSKLSP 480
Query: 481 SMLHGPALRSLEDVDSAKYLENVEGIRSNDAHDLTSQKKDKFEESSSLKFKVPNDKSIST 540
SMLHGPALRSLEDVDSAKYLENVEGIRSNDA DLTS+K DKFEESS LKFKVPNDKSIST
Sbjct: 481 SMLHGPALRSLEDVDSAKYLENVEGIRSNDACDLTSKKNDKFEESSPLKFKVPNDKSIST 540
Query: 541 GDGVGSSVPTKNTVSGSGLQVSYVGPSLQTKCAFQMSAHEDFVDMDEEGYSNGPVADISL 600
G+GVGSSVP K TVSGSG QVS+VGPSLQTKCAFQMSAHEDFVDMDEEGYSNGPVADIS+
Sbjct: 541 GNGVGSSVP-KETVSGSGQQVSFVGPSLQTKCAFQMSAHEDFVDMDEEGYSNGPVADISI 600
Query: 601 ERREKADSLVAVSKPNNTEALTVDKPQASIEAKPPAASAMNKVNDQGKSDVPVTTEKSPI 660
ER+EK +SLVAVSKPNNTEA+TVDKPQASIEAKPP SAMNK+NDQGKSDVPVTTEKSPI
Sbjct: 601 ERQEKVNSLVAVSKPNNTEAITVDKPQASIEAKPPTVSAMNKINDQGKSDVPVTTEKSPI 660
Query: 661 FSFPTASPPSITANVIGPESTLRPEKIASSEVPKAATTPIFGFGEKFPSQKEAVSSAPTF 720
FSFPT S PSITANVIGPES +RPEKIASSEVPKAATTPIFGFGEKFPSQKEAVS APTF
Sbjct: 661 FSFPTTSSPSITANVIGPESNMRPEKIASSEVPKAATTPIFGFGEKFPSQKEAVSFAPTF 720
Query: 721 AFGNKVTTSANEQNAIPVVTSEGNVEPTEQASAPTTFKFGDKATFPIPANAATENGNKNA 780
AF NK+TTS NEQNAIPVVTSEGNV+PT+QASAPTTFKFGDKATFPIPANAATENGNKN
Sbjct: 721 AFVNKITTSTNEQNAIPVVTSEGNVQPTQQASAPTTFKFGDKATFPIPANAATENGNKNE 780
Query: 781 GSLFKFASPLVNEKEGAKVGGSASVFKAESSSS----SILSFGVPKESMSEKSGDKSSDA 840
GS FASPLVNEKEGAK GGSASVFKAESSSS SI SFGVPKESMSEK+GDKSS A
Sbjct: 781 GSPL-FASPLVNEKEGAKEGGSASVFKAESSSSSFNCSIPSFGVPKESMSEKAGDKSSSA 840
Query: 841 GLAVGTSGNLLLSSVSTSTSTPTPSLFSFSSPSTNSNLNNGSLVSTTPSTFPTPATTFSN 900
G AVGTSG+L SSVSTS STPT LFSFSSPSTNSNLNNGSLVSTTPS FPTPATTFSN
Sbjct: 841 GFAVGTSGSLFSSSVSTSISTPTSGLFSFSSPSTNSNLNNGSLVSTTPS-FPTPATTFSN 900
Query: 901 NITNQNSSIKPSFNAATSNSEPVTTTSLPMSSPMPSFSAAPIFKFGSSSVPSTSAPALSA 960
NITNQNSSIKPSFNAA SNSEPVTTTSLP SS MPSFSAAPI KFGSSSVPSTSAPALSA
Sbjct: 901 NITNQNSSIKPSFNAAASNSEPVTTTSLPTSSLMPSFSAAPISKFGSSSVPSTSAPALSA 960
Query: 961 PSGVGSIETKSKQETTFGNLSGIPPSDTSAVKVSSTGSSVFQFGAASTTSDSNKRPENST 1020
PSGVGSIE+K+KQETTFGNLSGIPPSD SAVKVSSTGSSVFQFGAAST SDSNKRP NST
Sbjct: 961 PSGVGSIESKTKQETTFGNLSGIPPSDLSAVKVSSTGSSVFQFGAASTPSDSNKRPANST 1020
Query: 1021 FPPSNVPAFGAPVSPASSGLASSTQSTPVLQFSSSSTSFGLTGNTGLASGGSLFGSSAPA 1080
F PSNVP FGA SP SSGLASSTQSTPVLQF+SSSTSFGLTGNTGLASG SLFGSSAPA
Sbjct: 1021 FTPSNVPTFGASFSPVSSGLASSTQSTPVLQFNSSSTSFGLTGNTGLASGSSLFGSSAPA 1080
Query: 1081 SNLFTTGTTFGLASSSSSANNSISSSAGTSSSFFNWQPSSTPSFSTGFSSTPTAGFSFGL 1140
SNLF +G TFGLASSSSS NNS+SSSAGTSSSFFNWQPSSTPSFSTGFSSTPT GFSFGL
Sbjct: 1081 SNLFASGPTFGLASSSSSVNNSVSSSAGTSSSFFNWQPSSTPSFSTGFSSTPTGGFSFGL 1140
Query: 1141 SSSSAASNSAPMLFGSSSTGASTPSMFSFTSAATATTPQPAFGNSNHGFTFGSTPPANND 1200
SSSSAASNSAP+LFGSSSTG+ TPSMFSFTSAATATT QPAFGNSNHGFTFGSTPPANND
Sbjct: 1141 SSSSAASNSAPVLFGSSSTGSLTPSMFSFTSAATATTSQPAFGNSNHGFTFGSTPPANND 1200
Query: 1201 QASMEDSMAEDTVQTVASPMPSFGQQPLTPPPSSGFVFGSTAPSPLGANPFQFGGSQQNV 1260
QA+MEDSMAEDTVQTV SPMPSFGQQPLTPPPSSGFVFGSTAP PLGA+PFQFGGSQQNV
Sbjct: 1201 QANMEDSMAEDTVQTVTSPMPSFGQQPLTPPPSSGFVFGSTAP-PLGASPFQFGGSQQNV 1260
Query: 1261 PTPQ-NPSLFQASGSLDFNASAGGSFSLGAGGGDKSNRKYVKVKSKSRKK 1306
PTPQ NPS FQASGSLDFNASAGGSFSLGAGGGDKSNRK+VKVKSKSRKK
Sbjct: 1261 PTPQNNPSPFQASGSLDFNASAGGSFSLGAGGGDKSNRKFVKVKSKSRKK 1300
BLAST of Lsi08G006290 vs. NCBI nr
Match:
XP_008456625.1 (PREDICTED: nuclear pore complex protein NUP1-like [Cucumis melo] >XP_008456626.1 PREDICTED: nuclear pore complex protein NUP1-like [Cucumis melo] >KAA0031726.1 nuclear pore complex protein NUP1-like [Cucumis melo var. makuwa] >TYK11787.1 nuclear pore complex protein NUP1-like [Cucumis melo var. makuwa])
HSP 1 Score: 2011.9 bits (5211), Expect = 0.0e+00
Identity = 1123/1307 (85.92%), Postives = 1188/1307 (90.90%), Query Frame = 0
Query: 1 MATEREEVRYEGGRGGKFQKRPVRRSHTTPYDRPPTALRNSAGKGWLSKLVDPAQKLITS 60
MATEREEV+YEGGRGGKFQKRP+RRSHTTPYDRPPTALRNSA KGWLSKLVDPAQKLITS
Sbjct: 1 MATEREEVQYEGGRGGKFQKRPIRRSHTTPYDRPPTALRNSAAKGWLSKLVDPAQKLITS 60
Query: 61 SAHRLFSSVFRKRLPPPPPSLPLSREANDEVENRNQEEVAADPPGTQEGTNVDFVPSINS 120
SAHRLFS+VFRKRLPPPPPS LSREAN+E+E+RNQEEVAADP GTQEGTNV FVPSINS
Sbjct: 61 SAHRLFSTVFRKRLPPPPPSFSLSREANEEMEHRNQEEVAADPSGTQEGTNVGFVPSINS 120
Query: 121 NNTHGVSDLEKILKEKTFTRFEIDRLTELLKSRVADVPSGVESRKFEQFPSTPVISYGKQ 180
+NT G+SDLEKILKEKTF+RFEIDRLTELLKSRVADVPSGVESRKFEQ PSTPV S+G Q
Sbjct: 121 SNTQGLSDLEKILKEKTFSRFEIDRLTELLKSRVADVPSGVESRKFEQVPSTPVTSHGLQ 180
Query: 181 DGSPKFPAQSQDGVSPHMVPTHVASANVLDEDVASPAEIAKAFMGSRPPKATPLSMASHS 240
+GSPKFP QSQDGVSPHM PTHV +ANVLDEDVASPAEIAKA+MGSRPPKATPLSMA
Sbjct: 181 EGSPKFPTQSQDGVSPHMAPTHVVNANVLDEDVASPAEIAKAYMGSRPPKATPLSMA--- 240
Query: 241 QKFGDSFASGNPSKSSTLSLVPRSPGNFDVVENGFVTPRSRGRSALYSMARVPYSRVRAT 300
GNPSKSSTLSLVPRSPGNFDVVENGFVTPRSRGRSALYSMARVPYSRVRAT
Sbjct: 241 ---------GNPSKSSTLSLVPRSPGNFDVVENGFVTPRSRGRSALYSMARVPYSRVRAT 300
Query: 301 PSIKNSVATTDAYRATTSSSSQSAWGQGRLLGSDQGALKRRSSVLDDEMGSVGPIRRIRQ 360
PSIKNS+ATTDAYRATTSSSSQSAW QG LLGS QGALKRR+SVLDD+MGSVGPIRR RQ
Sbjct: 301 PSIKNSIATTDAYRATTSSSSQSAWEQGGLLGSKQGALKRRNSVLDDDMGSVGPIRRTRQ 360
Query: 361 KSNHLFHKGLSLPSSSTSIPVSGIGFESAQHLQSTKVHPFSSTGGKALYSSEIKRNLSKM 420
KSNHLF GLSLPSSSTSIP SGI E+A+HLQSTKVHPFSS GGK LYSSE +RN SK
Sbjct: 361 KSNHLFPTGLSLPSSSTSIPASGIRSETARHLQSTKVHPFSSNGGKPLYSSETQRNFSKT 420
Query: 421 SSESENAMTPSSSFPQIPLRSSEMASKILEQLDKLTPPKEKSSELKLLSVRNNSPTKLSP 480
S+ES+NAMTPSSSFP+IPLRSSEMASKILEQLD LTPPKEKSSELKLLSVRNNSP KLSP
Sbjct: 421 SAESKNAMTPSSSFPRIPLRSSEMASKILEQLDILTPPKEKSSELKLLSVRNNSPMKLSP 480
Query: 481 SMLHGPALRSLEDVDSAKYLENVEGIRSNDAHDLTSQKKDKFEESSSLKFKVPNDKSIST 540
SMLHGPALRSLE+VDSAKYLENVEGI+SNDA D TSQK DKFEESS K VPNDKSIST
Sbjct: 481 SMLHGPALRSLENVDSAKYLENVEGIQSNDACDPTSQKNDKFEESSPSKSNVPNDKSIST 540
Query: 541 GDGVGSSVPTKNTVSGSGLQVSYVGPSLQTKCAFQMSAHEDFVDMDEEGYSNGPVADISL 600
DGVGSSVPTK+ SGSG+QVS+VGPS+QTKCAFQMSAHEDFVDMDEEG+SNGPVAD S
Sbjct: 541 SDGVGSSVPTKDIGSGSGMQVSFVGPSVQTKCAFQMSAHEDFVDMDEEGFSNGPVADKSF 600
Query: 601 ERREKA-DSLVAVSKPNNTEALTVDKPQASIEAKPPAASAMNKVNDQGKSDVPVTTEKSP 660
E REK DSLV+VSKP NTEA+TV K + SIEAKP S MNK+NDQGKSDVP TTEKSP
Sbjct: 601 EMREKVDDSLVSVSKPKNTEAITVVKSKPSIEAKPSVVSVMNKINDQGKSDVPTTTEKSP 660
Query: 661 IFSFPTASPPSITANVIGPESTLRPEKIASSEVPKAATTPIFGFGEKFPSQKEAVSSAPT 720
IFSFPT S PS TANV GPES+LRPEK+AS E+PKAAT PIFGFGEK PSQKE +S PT
Sbjct: 661 IFSFPTTSSPSSTANVKGPESSLRPEKVASPELPKAATAPIFGFGEKSPSQKETLSQPPT 720
Query: 721 FAFGNKVTTSANEQNAIPVVTSEGNVEPTEQASAPTTFKFGDKATFPIPANAATENGNKN 780
FAFG+K TT+ NEQNAIPVVTSE N EPT+ AS PTTFKFGDKA+F IPANAATENGNK+
Sbjct: 721 FAFGSKATTT-NEQNAIPVVTSEANTEPTKHASTPTTFKFGDKASFSIPANAATENGNKS 780
Query: 781 AGSLFKFASPLVNEKEGAKVGGSASVFKAESSSSSILSFGVPKESMSEKSGDKSSDAGLA 840
AGSLFKF SPLVNEKEGA VGGSASVFKAE+SSSSI SFGVPKESMSEK+GDKSS GL
Sbjct: 781 AGSLFKFTSPLVNEKEGANVGGSASVFKAENSSSSIPSFGVPKESMSEKAGDKSSSPGLI 840
Query: 841 VGTSGNLLLSSVSTSTSTPTPSLFSFSSPSTNSNLNNGSLVSTTPSTFPTPATTFSNNIT 900
GTSGNL SS STSTSTPTPSLFSFSSPSTNSNLNNGSLVS TPST PTPATTFSNN+T
Sbjct: 841 FGTSGNLFSSSDSTSTSTPTPSLFSFSSPSTNSNLNNGSLVSITPSTLPTPATTFSNNVT 900
Query: 901 NQNSSIKPSFNAATSNSEPVTTTSLPMSSPMPSFSAAPIFKFGSSSVPSTSAPALSAPSG 960
+QNSSIKPS AATSNSEPVT+TS PMSSPMPSFSAAPIFKFGSSSVPSTSA ALSAPSG
Sbjct: 901 SQNSSIKPSSIAATSNSEPVTSTSPPMSSPMPSFSAAPIFKFGSSSVPSTSASALSAPSG 960
Query: 961 VGSIETKSKQETTFGNLSGIPPSDTSAVKVSSTGSSVFQFGAASTTSDSNKRPENSTFPP 1020
VGS+E K+K ETTFGNLSG+PPSDT+AVKV+STGSSVFQFGAASTTSD+NK P NSTF
Sbjct: 961 VGSVEAKTKPETTFGNLSGLPPSDTAAVKVASTGSSVFQFGAASTTSDANKGPANSTFAQ 1020
Query: 1021 SNVPAFGAPVSPASSGLASSTQSTPVLQFSSSSTSFGLTGNTGLASGGSLFGSSAPASNL 1080
+N+PAFGAPVS +SSGLASSTQSTP LQF SSSTSFGLTGNTGLASG SLFGSSAPASN
Sbjct: 1021 NNIPAFGAPVSFSSSGLASSTQSTPALQF-SSSTSFGLTGNTGLASGSSLFGSSAPASNP 1080
Query: 1081 FTTGTTFGLASSSSSANNSISSSAGTSSSFFNWQPSSTPSFSTGFSSTPTAGFSFGLSSS 1140
FT+G TFGLASSSSSANNS+SSSAGTSSSFFNWQPSSTPSFSTGFSSTP+ GFSFGLSSS
Sbjct: 1081 FTSGATFGLASSSSSANNSVSSSAGTSSSFFNWQPSSTPSFSTGFSSTPSGGFSFGLSSS 1140
Query: 1141 SAASNSAPMLFGSSSTGASTPSMFSFTSAATATTPQPAFGNSNHGFTFGSTPPA-NNDQA 1200
S+ASNSAPM+FGSSSTGAS SMFSFTSAA+ATT QPAFGNSN+ FTFGSTPPA NN+QA
Sbjct: 1141 SSASNSAPMVFGSSSTGASPASMFSFTSAASATTSQPAFGNSNNAFTFGSTPPANNNEQA 1200
Query: 1201 SMEDSMAEDTVQTVASPMPSFGQQPLTPPPSSGFVFGSTAPSPLGANPFQFGGSQQNVPT 1260
SMEDSMAEDTVQT ASPMPSFGQQPLTPPPSSGF+FGSTAPSPLGANPFQFGGSQQNV
Sbjct: 1201 SMEDSMAEDTVQT-ASPMPSFGQQPLTPPPSSGFMFGSTAPSPLGANPFQFGGSQQNV-- 1260
Query: 1261 PQNPSLFQASGSLDFNASAGGSFSLGAGGGDKSNRKYVKVKSKSRKK 1306
PQNPS FQASGSLDFNASAGGSFSLGAGGGDKSNRKYVKVKSKSRKK
Sbjct: 1261 PQNPSPFQASGSLDFNASAGGSFSLGAGGGDKSNRKYVKVKSKSRKK 1290
BLAST of Lsi08G006290 vs. NCBI nr
Match:
XP_011656578.1 (nuclear pore complex protein NUP1 [Cucumis sativus] >XP_031742754.1 nuclear pore complex protein NUP1 [Cucumis sativus] >KGN46058.1 hypothetical protein Csa_005234 [Cucumis sativus])
HSP 1 Score: 1999.2 bits (5178), Expect = 0.0e+00
Identity = 1110/1307 (84.93%), Postives = 1184/1307 (90.59%), Query Frame = 0
Query: 1 MATEREEVRYEGGRGGKFQKRPVRRSHTTPYDRPPTALRNSAGKGWLSKLVDPAQKLITS 60
MATERE+V+YEGGRGGKFQKRP+RRSHTTPYDRPPTALRNSA KGWLS LVDPA KLI S
Sbjct: 1 MATEREDVQYEGGRGGKFQKRPIRRSHTTPYDRPPTALRNSAAKGWLSNLVDPAHKLINS 60
Query: 61 SAHRLFSSVFRKRLPPPPPSLPLSREANDEVENRNQEEVAADPPGTQEGTNVDFVPSINS 120
+AH LFS+VFRKRLPPPPPS PLSREANDE+E+RNQEEVAADP GTQEGTN+ FVPSINS
Sbjct: 61 TAHWLFSTVFRKRLPPPPPSFPLSREANDEMEHRNQEEVAADPSGTQEGTNIGFVPSINS 120
Query: 121 NNTHGVSDLEKILKEKTFTRFEIDRLTELLKSRVADVPSGVESRKFEQFPSTPVISYGKQ 180
NNT G+SDLEKIL EKTF+RFEIDRLTELLKSRVADVP GVESRKFEQ PSTPV S+G Q
Sbjct: 121 NNTQGLSDLEKILNEKTFSRFEIDRLTELLKSRVADVPRGVESRKFEQVPSTPVTSHGIQ 180
Query: 181 DGSPKFPAQSQDGVSPHMVPTHVASANVLDEDVASPAEIAKAFMGSRPPKATPLSMASHS 240
+GSPK P QSQDGVSPHM THV +ANVLDEDVASPAEIAKA+MGSRPPKATPLSMA
Sbjct: 181 EGSPKLPTQSQDGVSPHMATTHVVTANVLDEDVASPAEIAKAYMGSRPPKATPLSMA--- 240
Query: 241 QKFGDSFASGNPSKSSTLSLVPRSPGNFDVVENGFVTPRSRGRSALYSMARVPYSRVRAT 300
GNP KSSTLSLVPRSPGNFDVVENGFVTPRSRGRSALYSMARVPYSRVRAT
Sbjct: 241 ---------GNPLKSSTLSLVPRSPGNFDVVENGFVTPRSRGRSALYSMARVPYSRVRAT 300
Query: 301 PSIKNSVATTDAYRATTSSSSQSAWGQGRLLGSDQGALKRRSSVLDDEMGSVGPIRRIRQ 360
PSIKNS+AT DAYR+TT SSSQSAW QGRLLGS QGALKRR+SVLDD+MGSVGPIRR RQ
Sbjct: 301 PSIKNSIATADAYRSTTPSSSQSAWEQGRLLGSKQGALKRRNSVLDDDMGSVGPIRRTRQ 360
Query: 361 KSNHLFHKGLSLPSSSTSIPVSGIGFESAQHLQSTKVHPFSSTGGKALYSSEIKRNLSKM 420
KSNHLF L LPSSSTSI SGIG E+A+HLQSTKVHPFSS GGK LYS+EI+RN SKM
Sbjct: 361 KSNHLFSTSLGLPSSSTSIRASGIGSETARHLQSTKVHPFSSNGGKPLYSNEIQRNFSKM 420
Query: 421 SSESENAMTPSSSFPQIPLRSSEMASKILEQLDKLTPPKEKSSELKLLSVRNNSPTKLSP 480
++ES+NAMTPSSSFPQIPLRSSEMASKILEQLDKLTPPKEKSSELKLLSVRNNSP KLSP
Sbjct: 421 TAESKNAMTPSSSFPQIPLRSSEMASKILEQLDKLTPPKEKSSELKLLSVRNNSPMKLSP 480
Query: 481 SMLHGPALRSLEDVDSAKYLENVEGIRSNDAHDLTSQKKDKFEESSSLKFKVPNDKSIST 540
SMLHGPALRSLEDVDSAKYLENVEGIRSNDA DLTSQK DKFEESS KF VPNDKSIST
Sbjct: 481 SMLHGPALRSLEDVDSAKYLENVEGIRSNDARDLTSQKNDKFEESSPSKFNVPNDKSIST 540
Query: 541 GDGVGSSVPTKNTVSGSGLQVSYVGPSLQTKCAFQMSAHEDFVDMDEEGYSNGPVADISL 600
GDGVGSSV TK+ SGSG+QVS+VGPS+QTKCAFQMSAHEDFVDMDEEG+SNGPVAD S
Sbjct: 541 GDGVGSSVSTKDAGSGSGMQVSFVGPSIQTKCAFQMSAHEDFVDMDEEGFSNGPVADKSF 600
Query: 601 ERREKA-DSLVAVSKPNNTEALTVDKPQASIEAKPPAASAMNKVNDQGKSDVPVTTEKSP 660
E + K DSLV+VSKP NTE +TVDK +ASIEAKP S MNK+NDQGKSDVP TTEKSP
Sbjct: 601 EMQGKVDDSLVSVSKPKNTEVITVDKSKASIEAKPFVVSVMNKINDQGKSDVPSTTEKSP 660
Query: 661 IFSFPTASPPSITANVIGPESTLRPEKIASSEVPKAATTPIFGFGEKFPSQKEAVSSAPT 720
IFSFPTAS PSITANV G ES+LRPEK+AS E+PKAAT PIFGFGEK PSQKEA S PT
Sbjct: 661 IFSFPTASSPSITANVKGTESSLRPEKVASPELPKAATAPIFGFGEKSPSQKEAGSHPPT 720
Query: 721 FAFGNKVTTSANEQNAIPVVTSEGNVEPTEQASAPTTFKFGDKATFPIPANAATENGNKN 780
FAFG+K TT+ NEQN I VVTSE NVEPT+QAS PTTFKFGDKA+FPIPANAATENGNK+
Sbjct: 721 FAFGSKATTT-NEQNTIHVVTSEANVEPTQQASPPTTFKFGDKASFPIPANAATENGNKS 780
Query: 781 AGSLFKFASPLVNEKEGAKVGGSASVFKAESSSSSILSFGVPKESMSEKSGDKSSDAGLA 840
AGSLFKFASPLVNEKEGA VGGSASVFKAE+SSSSI SFGVPKES+SEK+GDKSS GL
Sbjct: 781 AGSLFKFASPLVNEKEGANVGGSASVFKAENSSSSIPSFGVPKESISEKAGDKSSSPGLI 840
Query: 841 VGTSGNLLLSSVSTSTSTPTPSLFSFSSPSTNSNLNNGSLVSTTPSTFPTPATTFSNNIT 900
GTSGN SSVSTSTSTPTPSLFSFS+PSTNSNLNNGSLVSTTPST PTPATTFSNN+T
Sbjct: 841 FGTSGNFFSSSVSTSTSTPTPSLFSFSTPSTNSNLNNGSLVSTTPSTLPTPATTFSNNVT 900
Query: 901 NQNSSIKPSFNAATSNSEPVTTTSLPMSSPMPSFSAAPIFKFGSSSVPSTSAPALSAPSG 960
+QNSS+KPSF+AATSNSEPV++TS P SSPMPSFSAAPIFKFGSSSVPSTSAPALSAPS
Sbjct: 901 SQNSSVKPSFSAATSNSEPVSSTSPPTSSPMPSFSAAPIFKFGSSSVPSTSAPALSAPSV 960
Query: 961 VGSIETKSKQETTFGNLSGIPPSDTSAVKVSSTGSSVFQFGAASTTSDSNKRPENSTFPP 1020
VGS+ETK+K ETTFGNLSG P SDTSAVKV+STG+SVFQFGAASTTSD+NK P NSTF
Sbjct: 961 VGSVETKTKPETTFGNLSGFPASDTSAVKVASTGNSVFQFGAASTTSDANKGPANSTFAQ 1020
Query: 1021 SNVPAFGAPVSPASSGLASSTQSTPVLQFSSSSTSFGLTGNTGLASGGSLFGSSAPASNL 1080
+N+PAFGAPVS +SSGLA STQSTP LQFSSSSTSFGLT NTGLASG SLFGSSAPASN
Sbjct: 1021 NNIPAFGAPVSFSSSGLALSTQSTPALQFSSSSTSFGLTRNTGLASGSSLFGSSAPASNP 1080
Query: 1081 FTTGTTFGLASSSSSANNSISSSAGTSSSFFNWQPSSTPSFSTGFSSTPTAGFSFGLSSS 1140
FT+G TFGLASSSSSA+NS+SSSAGTSSSFFNWQPSSTPSFSTGFSSTP+ GFSFGLSSS
Sbjct: 1081 FTSGATFGLASSSSSASNSVSSSAGTSSSFFNWQPSSTPSFSTGFSSTPSGGFSFGLSSS 1140
Query: 1141 SAASNSAPMLFGSSSTGASTPSMFSFTSAATATTPQPAFGNSNHGFTFGSTPPA-NNDQA 1200
S+ASNSAPM+FGSSSTGA + SMFSFTSAA+ATT QPAFGNSN+ FTFGSTPPA NN+QA
Sbjct: 1141 SSASNSAPMVFGSSSTGAPSASMFSFTSAASATTSQPAFGNSNNAFTFGSTPPANNNEQA 1200
Query: 1201 SMEDSMAEDTVQTVASPMPSFGQQPLTPPPSSGFVFGSTAPSPLGANPFQFGGSQQNVPT 1260
SMEDSMAEDT+QT ASPMPSFGQQPLTPPPSSGF+FGSTAPSPLGANPFQF GSQQN+
Sbjct: 1201 SMEDSMAEDTIQT-ASPMPSFGQQPLTPPPSSGFMFGSTAPSPLGANPFQFSGSQQNL-- 1260
Query: 1261 PQNPSLFQASGSLDFNASAGGSFSLGAGGGDKSNRKYVKVKSKSRKK 1306
PQNPS FQASGSLDFNASAGGSFSLGAGGGDKSNRKYVKVKSKSRKK
Sbjct: 1261 PQNPSPFQASGSLDFNASAGGSFSLGAGGGDKSNRKYVKVKSKSRKK 1291
BLAST of Lsi08G006290 vs. TAIR 10
Match:
AT3G10650.1 (BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast hits to 31782 proteins in 2093 species: Archae - 202; Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants - 1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI BLink). )
HSP 1 Score: 412.1 bits (1058), Expect = 1.6e-114
Identity = 494/1428 (34.59%), Postives = 683/1428 (47.83%), Query Frame = 0
Query: 13 GRGGKFQKRPVRRSHTTPYDRPPTALRNSA-------GKGWLSKLVDPAQKLITSSAHRL 72
G GGKF+K RRS TPYDRP T++RN+ G GWLSKLVDPAQ+LIT SA RL
Sbjct: 18 GTGGKFRKPTARRSQKTPYDRPTTSVRNAGLGGGDVRGGGWLSKLVDPAQRLITYSAQRL 77
Query: 73 FSSVFRKRL---------PPPPPSLPLSREANDEVENRNQEEVA----ADPPGTQEGTNV 132
F S+ RKRL P LP R N E + ++E+V+ + E TN
Sbjct: 78 FGSLSRKRLGSGETPLQSPEQQKQLP-ERGVNQETKVGHKEDVSNLSMKNGLIRMEDTNA 137
Query: 133 DFVPSINSNNTHGVSDLEKILKEKTFTRFEIDRLTELLKSRVADVPSGVESRKFEQFPST 192
P G +DLEKIL+ KTFTR E+DRLT LL+S+ AD + E ++ E
Sbjct: 138 SVDPP-----KDGFTDLEKILQGKTFTRSEVDRLTTLLRSKAADSSTMNEEQRNE----- 197
Query: 193 PVISYGKQDGSPKFPAQSQDGVSPH------MVPTHVASANVLDEDVASPAEIAKAFMGS 252
G P P+ +D P +V T S LDE +ASPA++AKA+MGS
Sbjct: 198 ----VGMVVRHP--PSHERDRTHPDNGSMNTLVSTPPGSLRTLDECIASPAQLAKAYMGS 257
Query: 253 RPPKATPLSMASHSQKFGDSFASGN----PSKSSTLSLVPRSPGNFDVVENGFVTPRSRG 312
RP + TP + Q + N P KS T+SLV + P +ENGFVTPRSRG
Sbjct: 258 RPSEVTPSMLGLRGQAGREDSVFLNRTPFPQKSPTMSLVTK-PSGQRPLENGFVTPRSRG 317
Query: 313 RSALYSMARVPYSRVRATPSIKNSVATTDAYRATTSSSSQSAWGQGRLLGSDQG---ALK 372
RSA+YSMAR PYSR +++ I + +S S W + GS QG LK
Sbjct: 318 RSAVYSMARTPYSRPQSSVKI-----------GSLFQASPSKWEESLPSGSRQGFQSGLK 377
Query: 373 RRSSVLDDEMGSVGPIRRIRQKSNHLFHKGLSLPSSSTSIPVSGIGFESAQHLQSTKVHP 432
RRSSVLD+++GSVGP+RRIRQKSN L + L+LP S + + V G E H
Sbjct: 378 RRSSVLDNDIGSVGPVRRIRQKSN-LSSRSLALPVSESPLSVRANGGEKTTH-------- 437
Query: 433 FSSTGGKALYSSEIKRNLSKMSSESENAMTPSSSFPQIPLRSSEMASKILEQLDKLTPPK 492
SK S+E P SSF +P +SSEMASKIL+QLD
Sbjct: 438 -----------------TSKDSAED----IPGSSFNLVPTKSSEMASKILQQLD------ 497
Query: 493 EKSSELKLLSVRNNSPTKLSPSMLHGPALRSLEDVDSAKYLENVEGIRSNDAHDLTSQKK 552
KL+S R SP+KLSPSML GPAL+SL++V++ K+L N+ ++N + D + QK+
Sbjct: 498 ------KLVSTREKSPSKLSPSMLRGPALKSLQNVEAPKFLGNLPEKKAN-SPDSSYQKQ 557
Query: 553 DKFEESSSLKFKVPNDKSISTGDGVGSSVPTKN-TVSGSGLQVSYVGPSLQ----TKCAF 612
+ ES S + ++K+ DG + +K+ + G G+ + SL+ K +F
Sbjct: 558 EISRESVSREVLAQSEKTGDAVDGTSKTGSSKDQDMRGKGVYMPLTN-SLEEHPPKKRSF 617
Query: 613 QMSAHEDFVDMDEE-GYSNGPVADISLERREKADSLVAVSKPNNTEALTVDKPQASIEAK 672
+MSAHEDF+++D++ G ++ P E EK ++ V K + + + +KP EA
Sbjct: 618 RMSAHEDFLELDDDLGAASTP-----CEVAEKQNAF-EVEKSHISMPIG-EKPLTPSEAM 677
Query: 673 PPAASAMNKVNDQGKSDVPVTTEKSPIFSFPTAS-------------------------- 732
P + N QG S+ + TE++ +FP +
Sbjct: 678 PSTSYISNGDASQGTSNGSLETERNKFVAFPIEAVQQSNMASEPTSKFIQGTEKSSISSG 737
Query: 733 ----------------PPSITANV-IGPEST--LRPEKIASSEVP-KAATTPIFGFGEKF 792
P ++ N+ P +T L AS+++ + ++ FG E +
Sbjct: 738 KPTSEEKRIPLEEPKKPAAVFPNISFSPPATGLLNQNSGASADIKLEKTSSTAFGVSEAW 797
Query: 793 PSQKEAVSSAPTFAFGNKVTTSANE----------QNAIPVVTSEGNVE-----PTEQAS 852
E+ + A G + +TSA NA+ S G++ P ++
Sbjct: 798 AKPTESKKTFSNSASGAESSTSAAPTLNGSIFSAGANAVTPPPSNGSLTSSPSFPPSISN 857
Query: 853 APTTFKFGDKATFPIPANAATENGNKNAGSLFKFASPLVNEKEGAKVGGSASVFKAESSS 912
P+ GD + + + AAT N + G L P N+ S S + SS
Sbjct: 858 IPSDNSVGDMPS-TVQSFAATHNSSSIFGKL-----PTSND------SNSQSTSASPLSS 917
Query: 913 SSILSFGVP-----KESMSEKSGDKSSDAGLAVGTSGNLLLSSVSTSTSTPTPSLFSFSS 972
+S FG P ++SE SG S + + T GN TST F F
Sbjct: 918 TSPFKFGQPAAPFSAPAVSESSGQISKETEVKNATFGN---------TST-----FKFGG 977
Query: 973 PSTNSNLNNGSLVSTTPSTFPTPATTFSNNITNQNSSIKPSFNAATSNSEPVTTTSLPMS 1032
++ + + P F ++ S++ PS AA++
Sbjct: 978 MASADQSTGIVFGAKSAENKSRPGFVFGSSSVVGGSTLNPSTAAASA------------- 1037
Query: 1033 SPMPSFSAAPIFKFGSSSVPSTSAPALSAPSGVGSIETKSKQETTFGNLSGIPPSDTSAV 1092
P S + IF SSS P T +SA S + + FG S S S++
Sbjct: 1038 ---PESSGSLIFGVTSSSTPGTETSKISASSA-----ATNTGNSVFGTSSFAFTSSGSSM 1097
Query: 1093 ---KVSSTGSSVFQFGAASTTSDSNKRPENSTFPPSNVPAFGAPVSPASSGLASSTQSTP 1152
+STGSSVF F A S+ S ++ + + S A A SG +STQS P
Sbjct: 1098 VGGVSASTGSSVFGFNAVSSASATSSQSQASNL----FGAGNAQTGNTGSGTTTSTQSIP 1157
Query: 1153 VLQFSS--SSTSFGLTGNTGLASGGSLFGSSAPASNLFTTGTTFGLASSSSSANNSISSS 1212
QF S S+ SFGL+GN+ LAS S FG S +FT+ +T L+S++SSA++S + S
Sbjct: 1158 -FQFGSSPSAPSFGLSGNSSLASNSSPFGFSKSEPAVFTSVSTPQLSSTNSSASSSSTMS 1217
Query: 1213 A---GTSSSFFNWQPSSTPSFSTGF--SSTPTAGFSFGLSSSSAASNSAPMLFGSSSTGA 1272
+ GTS N P+S P FS+ F SSTPT FSFG SS++ S++ +FG+S+
Sbjct: 1218 SPLFGTSWQAPNSSPNSGPVFSSSFTTSSTPTT-FSFGGSSAATVSSTTTPIFGASTNNT 1277
Query: 1273 STPS-MFSFTSAATATTPQPA-----------FGNSNHGFTFGSTPPA----NNDQASME 1306
+PS +F F S T QP FGNS GF FG+ NN Q SME
Sbjct: 1278 PSPSPIFGFGSTPPTTPQQPVFGNSGTPSQSLFGNSTPGFAFGAPNNGNGINNNQQVSME 1309
BLAST of Lsi08G006290 vs. TAIR 10
Match:
AT5G20200.1 (nucleoporin-related )
HSP 1 Score: 86.7 bits (213), Expect = 1.6e-16
Identity = 193/791 (24.40%), Postives = 318/791 (40.20%), Query Frame = 0
Query: 12 GGRGGKFQKRPVRRSHTTPYDRPPTALRNSAGKGWLSKLVDPAQKLITSSAHRLFSSVFR 71
GG GGK +++ RR TPY RP + W+S++VDPA ++I+ A R+ F
Sbjct: 22 GGVGGKLKRQSARRHAATPYSRP--TQNQVQRRPWISRIVDPAYRIISGGATRILPYFFS 81
Query: 72 KRLPPPPPSLPL--SREANDEVENRNQEE----------------VAADPPGTQEGTNVD 131
P + P + E++N Q+ P GT +
Sbjct: 82 NAASAPALAAPPEDQNQHQGELQNNPQDNDPSVTPISNKPEPASIEVGGPSGTANVNEGN 141
Query: 132 FVPSINS------NNTHGVSDLEKILKEKTFTRFEIDRLTELLKSRVADVPSGVESRKFE 191
F S N+ +S+LE++++ KTF++ EIDRL E++ SR D+P + ++ E
Sbjct: 142 FSISAQRRGKAALNDDVAISELERLMEGKTFSQAEIDRLIEMISSRAIDLP---DVKRDE 201
Query: 192 QFPSTPVISYGKQDGS----PKFPAQSQDGVSP-HMVPTHVASANVLDEDV------ASP 251
+ P+ K++ S K P +D S PT +A + +LD D SP
Sbjct: 202 RNLEIPLREGAKKNMSLFDKAKEPIGGKDANSEIWATPTPLAKSIILDGDKIRDEVGLSP 261
Query: 252 AEIAKAFMGSRPPKATPLSMASHSQK--FGDSFASGNPSKSSTLSLVPRS-PGNFDVVEN 311
AE+AKA+MG + ++ + ++K S G S +S S PG ++
Sbjct: 262 AELAKAYMGGQTSSSSSQGFVARNEKDCLDRSMLVGKSSLASPSSKPSACWPGIKSSEQS 321
Query: 312 GFVTPRSRGRS-ALYSMARVPYSRVRATPSIKNSVATTDAYRATTSSSSQSAWGQGRLLG 371
GF TP+SR S L + R PYSR + NS + + +S + L
Sbjct: 322 GFATPQSRRESYGLQNFPRTPYSRT----ILSNSKSKLMQLQNDSSKHLSN-------LQ 381
Query: 372 SDQGALKRRSSVLDD--EMGSVGPIRRIRQKSNHLFHKGLSLPSSSTSIPVSGIGFESAQ 431
S +++RR L + G GP RR RQ + S PS S FE++
Sbjct: 382 SPSQSVERRYGQLSKGRDGGLFGPSRRTRQSATPSMVSPYSRPSRGAS------RFENSA 441
Query: 432 HLQSTKVHPFSSTGGKALYSSEIKRNLSKMSSESENAMTPSSSFPQIPLRSSEMASKILE 491
++ SS G++ Y S + E+E +P SS++A IL+
Sbjct: 442 IMK-------SSEAGESSYLSRSQITTYGKHKEAEVGTL------TVPTHSSQIARTILD 501
Query: 492 QLDKL---TPPKEKSSELKLLSVRNNSPTKLSPSMLHGPALRSLEDVDSAKYLENVEGIR 551
L++ + PK K++ELKL + + + + +D SAK E+++ I
Sbjct: 502 HLERTQSQSTPKNKTAELKLATSWRHPQSSKTVEKSSSDVTNVKKD-GSAKLHEDIQNIF 561
Query: 552 SNDAHDLTSQKKDKFEESSSLKFKVPN--DKSISTGDGVGSSVPTKNTVSGSGLQVSYVG 611
S +Q + ++ + N +K+ S +G+ ++ G+ LQ +
Sbjct: 562 SQ------NQPSSVLKPPATTTGDIQNGMNKTASATNGIFRGTQAASS-GGNALQYEFGK 621
Query: 612 PSLQTKCAFQMSAHEDFVDMDEEG-----YS-NGPVADI------SLERREKADSLVAVS 671
P K + S H++ ++ YS G A++ SL + ++V+
Sbjct: 622 P----KGSLSRSMHDELGTSSQDAAKAVPYSFGGETANLPKPPSHSLGNNKPVLPSISVA 681
Query: 672 KPNNTEALTVDKPQASIEAKPPAASAMNKVNDQGKSDVPVTTEKSPIFSFP-TASPPSIT 731
KP A+ P+ S SD ++E + P T SPP
Sbjct: 682 KPFQKWAV-------------PSGSNAGFTFPVSSSDGTTSSEPTTPSIMPFTTSPP--V 741
Query: 732 ANVIGPESTLRPEKIASSEVPKAATTPIFGFGEK------FPS-QKEAVSSAPTFAFGNK 737
A+ G T E E+P+ + G+K FPS +E VS FG K
Sbjct: 742 ASGGGVAITNHHEARKDYEIPQFSFDGSNRRGDKSPLVFSFPSVSEEVVSEDDDARFGIK 750
BLAST of Lsi08G006290 vs. TAIR 10
Match:
AT2G45000.1 (structural constituent of nuclear pore )
HSP 1 Score: 45.4 bits (106), Expect = 4.0e-04
Identity = 104/323 (32.20%), Postives = 156/323 (48.30%), Query Frame = 0
Query: 976 LSGIPPSDTSAVKVSSTGSSVFQFGAASTTSDSNKRPENSTFPPSNVPAFGAPVSPASS- 1035
+SG P +++V F FG++S T+ S+ +ST P + +F +P+S+
Sbjct: 1 MSGFPFGQSNSV-------GGFSFGSSSATNSSS---ASSTTSPLSF-SFNQSSNPSSTG 60
Query: 1036 -GLASSTQSTPVLQFSSSSTSFGLTGNTGLASGGSLFGSSAPASNLFTTGTTFGLASSSS 1095
G SS STP SS++ SFG ++ + G FGSSA +S T FG ++S +
Sbjct: 61 FGFGSSVSSTPA---SSTTPSFGFGASSTPSFG---FGSSASSS---TPSFGFGSSASVT 120
Query: 1096 SANNSISSSAGTSSSFFNWQPSSTPSFSTGFSSTPTAGFSFGLSSSSAASNSAP--MLFG 1155
A+ + S GT++S PS S +T SS FG +SSA+S + P LFG
Sbjct: 121 PASTTPSFGFGTAASSSAPAPSLFGSSTTNASSAAPGSSPFGFVTSSASSTATPSSSLFG 180
Query: 1156 SSSTGASTPSMFSFTSAATATTPQPAFGNSNHGFTFGSTPPANNDQA-SMEDSMAEDTVQ 1215
+ ++ A+TPS F AA A+ P FG+S F+ S+ A+N S A T
Sbjct: 181 APASSAATPSSSPF-GAAPASGSTPLFGSSPSLFSAPSSASASNSSLFGASSSAATSTSP 240
Query: 1216 TVASPMPSFGQQP-----LTPPPSSGFVFGSTAPSPLGANPFQFGGSQQNVPTPQNPSLF 1275
+P + G P + P SS +FG+T SP + GS +PS+F
Sbjct: 241 LFGAPSSATGATPSFSVASSAPGSSSSIFGATGSSPSFSVASSASGS--------SPSIF 294
Query: 1276 QASGSLDF---NASAGGSFSLGA 1286
A+GS F ++SAG + SL A
Sbjct: 301 GATGSSPFFGSSSSAGSTPSLFA 294
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9CAF4 | 2.3e-113 | 34.59 | Nuclear pore complex protein NUP1 OS=Arabidopsis thaliana OX=3702 GN=NUP1 PE=1 S... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3C4Z3 | 0.0e+00 | 85.92 | nuclear pore complex protein NUP1-like OS=Cucumis melo OX=3656 GN=LOC103496528 P... | [more] |
A0A5A7SNY9 | 0.0e+00 | 85.92 | Nuclear pore complex protein NUP1-like OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
A0A0A0K9E4 | 0.0e+00 | 84.93 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G046360 PE=4 SV=1 | [more] |
A0A6J1FKS9 | 0.0e+00 | 85.28 | nuclear pore complex protein NUP1-like isoform X2 OS=Cucurbita moschata OX=3662 ... | [more] |
A0A6J1FF52 | 0.0e+00 | 85.02 | nuclear pore complex protein NUP1-like isoform X1 OS=Cucurbita moschata OX=3662 ... | [more] |
Match Name | E-value | Identity | Description | |
XP_038884354.1 | 0.0e+00 | 91.73 | nuclear pore complex protein NUP1-like isoform X2 [Benincasa hispida] | [more] |
XP_038884353.1 | 0.0e+00 | 91.45 | nuclear pore complex protein NUP1-like isoform X1 [Benincasa hispida] | [more] |
XP_038884355.1 | 0.0e+00 | 91.22 | nuclear pore complex protein NUP1-like isoform X3 [Benincasa hispida] | [more] |
XP_008456625.1 | 0.0e+00 | 85.92 | PREDICTED: nuclear pore complex protein NUP1-like [Cucumis melo] >XP_008456626.1... | [more] |
XP_011656578.1 | 0.0e+00 | 84.93 | nuclear pore complex protein NUP1 [Cucumis sativus] >XP_031742754.1 nuclear pore... | [more] |
Match Name | E-value | Identity | Description | |
AT3G10650.1 | 1.6e-114 | 34.59 | BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.... | [more] |
AT5G20200.1 | 1.6e-16 | 24.40 | nucleoporin-related | [more] |
AT2G45000.1 | 4.0e-04 | 32.20 | structural constituent of nuclear pore | [more] |